View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15777_low_61 (Length: 222)
Name: NF15777_low_61
Description: NF15777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15777_low_61 |
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Alignment Details
Target: chr1 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 41658902 - 41658703
Alignment:
| Q |
8 |
gaagcaaaggaagatgctcaattttgtagctgattgacacaaaatgcagtagacttcaatcaagcactttgacaaaatctaaacttttatgaaactatta |
107 |
Q |
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| T |
41658902 |
gaagcaaaagaagatgctcaattttgtagctgattgacacaaaatgcagtagacttcaatcaagcactttggcaaaatctaaacttttatgaaactatta |
41658803 |
T |
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| Q |
108 |
atcctttatatctattgggataaggatctatagacagttttataatattttggtagctgtgtcaagttttgatag-cgtaagcatatatgatctttctta |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
41658802 |
atcctttatatctattgggataaggatctatagacagttttataatattttggtagctgtgtcaagttttgatagacgtaagcatatatgatcttcctta |
41658703 |
T |
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