View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15778_low_13 (Length: 243)
Name: NF15778_low_13
Description: NF15778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15778_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 38265950 - 38265767
Alignment:
| Q |
43 |
gcgttgataaaggtcctttctataataaggagttgattccaacaaattaggattatacgaatcaaaaagactactcaaagaatcattatcatataaatta |
142 |
Q |
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| T |
38265950 |
gcgttgataaaggtcctttctataataaggagttgattccaacaaataaggattatacgaatcaaaaagactactcaaagaatcattatcatataaatta |
38265851 |
T |
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| Q |
143 |
atcctctccaagaaattaagagtttgatatgtaaaacgatcaacgacagaaacacccaaatccgaatcaaaatgatgtgaatac |
226 |
Q |
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| T |
38265850 |
atcctctccaagaaattaagagtttgatatgtaaagcgatcaacgacagaaacacccaaatccaaatcagaatgatgtgaatac |
38265767 |
T |
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