View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15778_low_14 (Length: 237)
Name: NF15778_low_14
Description: NF15778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15778_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 33503683 - 33503478
Alignment:
| Q |
11 |
agcataggagaaagaagaaaagaagttaactgcaaaaaccactcaagaacaggatgatatccctcttttttattcagacatcatgcccctccttgtaaga |
110 |
Q |
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| T |
33503683 |
agcaaaggagaaagaagaaaagaagttaactgcaaaaaccactcaagaacaggatgatatccctcttttttattcagacatcatgcccctccttgtaaga |
33503584 |
T |
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| Q |
111 |
acattttcttcttcattttttaaattttgaaaccaagccagattgatacaggtacattgaaattgaatatttatgattttaggtccaaagtgtaactggt |
210 |
Q |
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| T |
33503583 |
acattttcttcttcatttttaaaaatttgaaaccaagccagattgatacaagtac------attgaatatttatgattttaggtccaaagtgtaactggt |
33503490 |
T |
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| Q |
211 |
tacttactctta |
222 |
Q |
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|||||||||||| |
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| T |
33503489 |
tacttactctta |
33503478 |
T |
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