View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1578-INSERTION-1 (Length: 987)

Name: NF1578-INSERTION-1
Description: NF1578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1578-INSERTION-1
NF1578-INSERTION-1
[»] chr2 (40 HSPs)
chr2 (7-738)||(16335711-16336448)
chr2 (7-540)||(16122752-16123286)
chr2 (740-987)||(1481811-1482059)
chr2 (740-987)||(1520176-1520424)
chr2 (740-987)||(25853269-25853517)
chr2 (733-987)||(45505622-45505877)
chr2 (740-987)||(44143360-44143608)
chr2 (743-987)||(2390523-2390768)
chr2 (755-987)||(43577018-43577251)
chr2 (740-987)||(13195974-13196222)
chr2 (740-987)||(21657927-21658175)
chr2 (740-987)||(39697614-39697862)
chr2 (740-987)||(42342968-42343216)
chr2 (740-987)||(3178226-3178474)
chr2 (740-987)||(40811609-40811857)
chr2 (740-987)||(34202279-34202527)
chr2 (740-987)||(37094088-37094336)
chr2 (740-987)||(10638778-10639025)
chr2 (740-923)||(15011819-15012002)
chr2 (735-987)||(927059-927292)
chr2 (532-738)||(16123459-16123677)
chr2 (809-987)||(874953-875119)
chr2 (740-866)||(4331840-4331966)
chr2 (739-866)||(38629368-38629495)
chr2 (740-866)||(13480508-13480634)
chr2 (740-865)||(26170976-26171101)
chr2 (740-811)||(32551681-32551752)
chr2 (740-811)||(35895492-35895563)
chr2 (740-866)||(7722632-7722758)
chr2 (740-865)||(44798809-44798933)
chr2 (740-865)||(45443516-45443640)
chr2 (770-866)||(44456771-44456867)
chr2 (740-866)||(458568-458694)
chr2 (776-862)||(31569622-31569708)
chr2 (781-851)||(10554738-10554807)
chr2 (758-812)||(27980924-27980978)
chr2 (758-812)||(28067454-28067508)
chr2 (782-866)||(40659197-40659278)
chr2 (764-839)||(5109181-5109256)
chr2 (782-852)||(16313556-16313626)
[»] chr4 (62 HSPs)
chr4 (735-987)||(42724031-42724284)
chr4 (740-987)||(39540251-39540499)
chr4 (740-987)||(56362818-56363066)
chr4 (726-987)||(20434147-20434410)
chr4 (740-986)||(55215444-55215691)
chr4 (740-987)||(10541882-10542130)
chr4 (740-987)||(19873972-19874220)
chr4 (740-987)||(52913043-52913291)
chr4 (740-987)||(53874960-53875208)
chr4 (740-987)||(55219867-55220115)
chr4 (738-987)||(37234055-37234305)
chr4 (739-987)||(55183377-55183626)
chr4 (740-987)||(28406288-28406536)
chr4 (740-987)||(38291705-38291953)
chr4 (740-987)||(42348660-42348908)
chr4 (740-987)||(613823-614071)
chr4 (740-987)||(52839582-52839830)
chr4 (740-987)||(53035868-53036113)
chr4 (740-987)||(25857541-25857788)
chr4 (740-987)||(23895044-23895293)
chr4 (740-987)||(52307307-52307555)
chr4 (740-898)||(43830157-43830315)
chr4 (9-316)||(12895661-12895968)
chr4 (740-866)||(43458363-43458489)
chr4 (740-866)||(47467379-47467505)
chr4 (740-866)||(24034518-24034644)
chr4 (740-865)||(24896985-24897109)
chr4 (740-812)||(20737690-20737762)
chr4 (763-866)||(40430145-40430248)
chr4 (763-865)||(49298-49400)
chr4 (765-866)||(11682233-11682334)
chr4 (765-866)||(11690512-11690613)
chr4 (737-866)||(35339616-35339745)
chr4 (740-812)||(56018719-56018791)
chr4 (740-866)||(22301719-22301842)
chr4 (740-866)||(1522783-1522909)
chr4 (740-866)||(3026381-3026507)
chr4 (740-866)||(13962450-13962575)
chr4 (740-866)||(22847104-22847230)
chr4 (740-826)||(28803980-28804066)
chr4 (740-866)||(41202317-41202443)
chr4 (740-866)||(48990345-48990468)
chr4 (763-866)||(51322672-51322775)
chr4 (740-866)||(43621546-43621672)
chr4 (763-856)||(8713247-8713338)
chr4 (740-862)||(48349460-48349582)
chr4 (607-664)||(12895407-12895464)
chr4 (741-857)||(30217104-30217220)
chr4 (763-866)||(37828775-37828877)
chr4 (740-851)||(50561564-50561674)
chr4 (741-866)||(34159011-34159136)
chr4 (793-866)||(36851458-36851531)
chr4 (740-812)||(31709715-31709787)
chr4 (770-852)||(32932614-32932696)
chr4 (740-826)||(51322401-51322487)
chr4 (782-866)||(32135398-32135479)
chr4 (734-866)||(47429803-47429933)
chr4 (391-478)||(12895523-12895610)
chr4 (740-866)||(37683236-37683359)
chr4 (763-848)||(7318450-7318536)
chr4 (773-866)||(20293267-20293360)
chr4 (740-857)||(50469063-50469180)
[»] chr7 (52 HSPs)
chr7 (740-987)||(43246789-43247037)
chr7 (740-987)||(46321878-46322126)
chr7 (740-987)||(26015698-26015946)
chr7 (740-987)||(38875886-38876134)
chr7 (740-987)||(46923878-46924126)
chr7 (740-987)||(47065772-47066020)
chr7 (740-987)||(21278901-21279149)
chr7 (740-987)||(32542015-32542263)
chr7 (740-987)||(7900433-7900681)
chr7 (740-987)||(8203273-8203521)
chr7 (740-987)||(8215750-8215998)
chr7 (740-987)||(38283423-38283671)
chr7 (740-987)||(40995187-40995435)
chr7 (740-987)||(25876776-25877024)
chr7 (740-987)||(34591676-34591924)
chr7 (740-987)||(40705345-40705592)
chr7 (738-987)||(7790901-7791152)
chr7 (740-987)||(27324955-27325203)
chr7 (740-987)||(47779341-47779589)
chr7 (738-987)||(40994645-40994895)
chr7 (740-987)||(32662221-32662448)
chr7 (740-827)||(35924230-35924317)
chr7 (740-866)||(43775883-43776009)
chr7 (740-866)||(20492684-20492809)
chr7 (740-866)||(24980855-24980981)
chr7 (740-812)||(42095782-42095854)
chr7 (735-866)||(45870127-45870258)
chr7 (763-852)||(39597841-39597930)
chr7 (740-852)||(12847146-12847258)
chr7 (740-812)||(39074364-39074436)
chr7 (740-812)||(43047094-43047166)
chr7 (792-867)||(19021015-19021090)
chr7 (763-866)||(40862382-40862485)
chr7 (740-866)||(10594084-10594210)
chr7 (763-866)||(42436462-42436565)
chr7 (740-866)||(30173420-30173546)
chr7 (740-866)||(36688694-36688819)
chr7 (740-866)||(40305431-40305557)
chr7 (763-866)||(7883634-7883737)
chr7 (743-866)||(241685-241807)
chr7 (740-866)||(29042144-29042269)
chr7 (740-812)||(21874639-21874711)
chr7 (770-866)||(48641965-48642060)
chr7 (734-847)||(44709873-44709986)
chr7 (740-857)||(46101804-46101921)
chr7 (782-866)||(47540332-47540417)
chr7 (782-866)||(47546889-47546974)
chr7 (782-866)||(12428641-12428725)
chr7 (740-864)||(25764874-25764991)
chr7 (782-866)||(19473980-19474061)
chr7 (740-779)||(19687096-19687135)
chr7 (773-866)||(48874341-48874434)
[»] chr3 (63 HSPs)
chr3 (740-987)||(20835431-20835679)
chr3 (735-987)||(22781756-22782009)
chr3 (740-987)||(10841281-10841529)
chr3 (740-987)||(38871120-38871368)
chr3 (740-987)||(25710886-25711134)
chr3 (755-987)||(33712472-33712705)
chr3 (739-987)||(37971523-37971772)
chr3 (740-987)||(53974310-53974558)
chr3 (740-987)||(4044657-4044905)
chr3 (740-987)||(4515863-4516111)
chr3 (741-987)||(41069837-41070083)
chr3 (740-987)||(10999595-10999843)
chr3 (740-987)||(20048334-20048582)
chr3 (740-987)||(36430267-36430515)
chr3 (740-987)||(40586020-40586268)
chr3 (773-987)||(6268207-6268422)
chr3 (740-987)||(33966895-33967129)
chr3 (177-519)||(36029755-36030092)
chr3 (740-983)||(7156541-7156768)
chr3 (28-360)||(36003558-36003888)
chr3 (740-866)||(36885711-36885837)
chr3 (740-866)||(7680974-7681100)
chr3 (740-866)||(35039572-35039698)
chr3 (13-312)||(36024640-36024939)
chr3 (735-866)||(38145211-38145342)
chr3 (740-866)||(36232642-36232768)
chr3 (738-866)||(11123856-11123984)
chr3 (740-812)||(84388-84460)
chr3 (740-812)||(32236132-32236204)
chr3 (730-812)||(20657412-20657493)
chr3 (740-865)||(33392511-33392635)
chr3 (740-857)||(44354478-44354595)
chr3 (740-812)||(7679722-7679794)
chr3 (738-866)||(11095645-11095773)
chr3 (740-812)||(26090201-26090273)
chr3 (741-812)||(24395096-24395167)
chr3 (783-866)||(47098274-47098357)
chr3 (763-857)||(49779834-49779928)
chr3 (740-857)||(30418690-30418807)
chr3 (740-857)||(36841085-36841202)
chr3 (740-812)||(672067-672139)
chr3 (763-866)||(14279129-14279232)
chr3 (740-866)||(4596397-4596522)
chr3 (391-519)||(36003897-36004019)
chr3 (782-866)||(39627093-39627176)
chr3 (763-866)||(48584857-48584960)
chr3 (763-866)||(51662133-51662236)
chr3 (769-860)||(54556376-54556467)
chr3 (740-857)||(2613306-2613423)
chr3 (771-867)||(1774066-1774162)
chr3 (770-865)||(8947833-8947927)
chr3 (781-866)||(52812168-52812253)
chr3 (782-866)||(52343124-52343208)
chr3 (740-866)||(19941682-19941808)
chr3 (782-866)||(41588920-41589001)
chr3 (735-779)||(22786329-22786373)
chr3 (248-300)||(23387520-23387572)
chr3 (111-165)||(23353051-23353105)
chr3 (106-164)||(23441020-23441078)
chr3 (106-164)||(23473552-23473610)
chr3 (763-865)||(35233637-35233738)
chr3 (111-168)||(23405760-23405817)
chr3 (111-168)||(23464391-23464448)
[»] chr8 (50 HSPs)
chr8 (742-987)||(39365248-39365494)
chr8 (740-987)||(17122090-17122338)
chr8 (743-987)||(8376243-8376488)
chr8 (740-987)||(23357092-23357340)
chr8 (734-987)||(26122361-26122615)
chr8 (740-987)||(3032733-3032981)
chr8 (740-987)||(5988188-5988436)
chr8 (740-987)||(24822559-24822807)
chr8 (740-987)||(35605337-35605585)
chr8 (741-987)||(34917539-34917786)
chr8 (740-987)||(26290614-26290862)
chr8 (740-987)||(26303871-26304119)
chr8 (740-987)||(26337226-26337474)
chr8 (740-987)||(43664161-43664408)
chr8 (740-987)||(3137060-3137308)
chr8 (740-987)||(8656554-8656802)
chr8 (740-987)||(34564864-34565112)
chr8 (740-987)||(42512159-42512407)
chr8 (740-962)||(22439467-22439689)
chr8 (739-852)||(31793821-31793934)
chr8 (743-866)||(12722559-12722682)
chr8 (740-822)||(12713578-12713660)
chr8 (740-866)||(41942319-41942445)
chr8 (740-857)||(42687908-42688025)
chr8 (740-812)||(15839455-15839527)
chr8 (740-812)||(28885723-28885795)
chr8 (740-812)||(28909662-28909734)
chr8 (740-866)||(36057690-36057816)
chr8 (740-812)||(8013936-8014008)
chr8 (740-812)||(11587898-11587970)
chr8 (740-812)||(17601334-17601406)
chr8 (740-812)||(37577983-37578055)
chr8 (770-862)||(38168447-38168539)
chr8 (740-866)||(4005765-4005891)
chr8 (740-866)||(38460060-38460185)
chr8 (741-865)||(5347437-5347560)
chr8 (740-812)||(5599872-5599944)
chr8 (740-812)||(5640676-5640748)
chr8 (776-866)||(7969992-7970081)
chr8 (763-866)||(11266156-11266259)
chr8 (770-863)||(16571211-16571303)
chr8 (763-826)||(38945711-38945774)
chr8 (740-850)||(38234417-38234527)
chr8 (741-866)||(4229637-4229762)
chr8 (740-826)||(35329725-35329810)
chr8 (782-851)||(5552-5621)
chr8 (740-807)||(28620416-28620483)
chr8 (763-838)||(39712700-39712774)
chr8 (784-858)||(2828281-2828354)
chr8 (792-866)||(44025624-44025698)
[»] scaffold0391 (1 HSPs)
scaffold0391 (740-987)||(3875-4123)
[»] scaffold0368 (1 HSPs)
scaffold0368 (740-987)||(13862-14110)
[»] chr5 (41 HSPs)
chr5 (740-987)||(9065698-9065946)
chr5 (740-987)||(4156006-4156254)
chr5 (740-987)||(31527415-31527663)
chr5 (740-987)||(33280809-33281057)
chr5 (740-987)||(43293495-43293743)
chr5 (740-987)||(43518129-43518377)
chr5 (740-987)||(13145718-13145966)
chr5 (740-987)||(24559068-24559316)
chr5 (740-987)||(24600100-24600348)
chr5 (740-987)||(19034558-19034806)
chr5 (740-987)||(37865875-37866123)
chr5 (740-866)||(40738892-40739018)
chr5 (734-866)||(18864424-18864556)
chr5 (740-866)||(10666096-10666222)
chr5 (740-862)||(36294181-36294303)
chr5 (740-852)||(41881893-41882005)
chr5 (740-869)||(12189262-12189391)
chr5 (740-812)||(25084856-25084928)
chr5 (740-812)||(25142829-25142901)
chr5 (740-852)||(31484649-31484761)
chr5 (763-866)||(7338643-7338745)
chr5 (763-866)||(37274574-37274677)
chr5 (740-811)||(38760537-38760608)
chr5 (741-866)||(6245188-6245313)
chr5 (740-812)||(6469947-6470019)
chr5 (763-866)||(4621169-4621272)
chr5 (747-866)||(13210948-13211067)
chr5 (740-866)||(8232543-8232669)
chr5 (740-866)||(42437334-42437460)
chr5 (741-866)||(15272728-15272853)
chr5 (740-812)||(19617736-19617808)
chr5 (740-851)||(37340800-37340911)
chr5 (740-843)||(43548565-43548668)
chr5 (740-866)||(31498837-31498963)
chr5 (740-812)||(29920290-29920362)
chr5 (763-866)||(18522184-18522287)
chr5 (743-866)||(18978453-18978576)
chr5 (782-856)||(37105892-37105965)
chr5 (741-866)||(10552506-10552630)
chr5 (776-859)||(27308709-27308791)
chr5 (788-839)||(35319759-35319810)
[»] chr1 (55 HSPs)
chr1 (740-987)||(24317181-24317428)
chr1 (740-987)||(33010622-33010870)
chr1 (740-987)||(39569291-39569539)
chr1 (740-987)||(42948189-42948437)
chr1 (740-987)||(52044225-52044473)
chr1 (740-987)||(34270609-34270857)
chr1 (740-987)||(44721871-44722119)
chr1 (740-987)||(52024725-52024973)
chr1 (740-986)||(15932786-15933033)
chr1 (740-987)||(6653224-6653472)
chr1 (740-987)||(40400033-40400281)
chr1 (745-987)||(20581504-20581746)
chr1 (740-987)||(18909215-18909463)
chr1 (740-987)||(50727797-50728045)
chr1 (740-987)||(26151001-26151249)
chr1 (740-983)||(49823204-49823448)
chr1 (740-987)||(2482465-2482716)
chr1 (740-987)||(13942143-13942391)
chr1 (740-987)||(2138081-2138329)
chr1 (740-952)||(28852791-28853003)
chr1 (740-987)||(51677084-51677332)
chr1 (740-836)||(13240207-13240303)
chr1 (740-866)||(29922183-29922309)
chr1 (740-866)||(40498617-40498743)
chr1 (740-866)||(51776029-51776155)
chr1 (734-866)||(17605721-17605853)
chr1 (740-812)||(11173512-11173584)
chr1 (740-812)||(14247457-14247529)
chr1 (740-812)||(39982263-39982335)
chr1 (740-812)||(51290549-51290621)
chr1 (743-866)||(41712763-41712886)
chr1 (740-866)||(26307846-26307972)
chr1 (740-866)||(51001990-51002116)
chr1 (744-857)||(23444312-23444424)
chr1 (740-812)||(40536800-40536872)
chr1 (740-866)||(7009008-7009131)
chr1 (763-866)||(14290252-14290355)
chr1 (740-866)||(9640850-9640976)
chr1 (740-866)||(32086482-32086608)
chr1 (740-857)||(13146022-13146138)
chr1 (741-857)||(17474665-17474781)
chr1 (764-850)||(5672915-5673001)
chr1 (740-866)||(12601854-12601979)
chr1 (763-866)||(8114863-8114966)
chr1 (763-866)||(19247736-19247839)
chr1 (741-851)||(19514110-19514220)
chr1 (763-866)||(35273849-35273952)
chr1 (740-811)||(48933215-48933286)
chr1 (740-866)||(32561264-32561389)
chr1 (740-866)||(24527597-24527720)
chr1 (740-858)||(3485815-3485933)
chr1 (763-862)||(35841475-35841574)
chr1 (938-978)||(13240168-13240209)
chr1 (740-857)||(46291790-46291907)
chr1 (740-866)||(6016572-6016698)
[»] scaffold0276 (2 HSPs)
scaffold0276 (740-987)||(12520-12768)
scaffold0276 (740-987)||(13885-14133)
[»] chr6 (22 HSPs)
chr6 (740-987)||(29630332-29630580)
chr6 (740-987)||(6167772-6168020)
chr6 (740-987)||(6625358-6625606)
chr6 (740-987)||(7141263-7141511)
chr6 (755-987)||(29122190-29122423)
chr6 (740-987)||(3094588-3094836)
chr6 (740-987)||(18893675-18893923)
chr6 (739-959)||(25335003-25335223)
chr6 (734-934)||(13889848-13890048)
chr6 (740-866)||(6925777-6925903)
chr6 (770-866)||(7081002-7081098)
chr6 (740-866)||(18024379-18024505)
chr6 (740-866)||(23350354-23350480)
chr6 (764-866)||(34085802-34085904)
chr6 (740-865)||(11369039-11369164)
chr6 (770-866)||(5714907-5715003)
chr6 (741-865)||(32173670-32173794)
chr6 (770-866)||(8811261-8811357)
chr6 (740-819)||(31091150-31091229)
chr6 (740-826)||(8525525-8525611)
chr6 (763-826)||(29623170-29623233)
chr6 (763-824)||(13445402-13445463)
[»] scaffold0438 (1 HSPs)
scaffold0438 (740-987)||(1951-2199)
[»] scaffold0007 (2 HSPs)
scaffold0007 (740-987)||(156951-157199)
scaffold0007 (763-851)||(200056-200144)
[»] scaffold0248 (1 HSPs)
scaffold0248 (740-939)||(2909-3108)
[»] scaffold0065 (1 HSPs)
scaffold0065 (740-812)||(38424-38496)
[»] scaffold0896 (1 HSPs)
scaffold0896 (770-866)||(3708-3804)
[»] scaffold0003 (1 HSPs)
scaffold0003 (770-866)||(365809-365905)
[»] scaffold0578 (1 HSPs)
scaffold0578 (741-851)||(8719-8829)
[»] scaffold0264 (1 HSPs)
scaffold0264 (783-856)||(13535-13609)


Alignment Details
Target: chr2 (Bit Score: 513; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 7 - 738
Target Start/End: Complemental strand, 16336448 - 16335711
Alignment:
Q  7 acaacattgaatccacacctagttgattcttcccttacattttcgaggaaacaatgatattcgaattgagaacaatatttatcatataannnnnnngcta 106  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||       ||||    
T  16336448 acaacattgagtccacacctagttgattcttcccttacattttcgaggaaacaatgatattcaaattgagaacaatagttaccatataaactttttgcta 16336349  T
Q  107 gagaggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttgacccattattcgttaacaatttaatctctgcatacttttcttc 206  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  16336348 gagcggtctttcctatgccccccatgccccataatccaagcgttctaacatcatttgacccattattcgttaacaattcaatctcttcatacttttcttc 16336249  T
Q  207 aattccaacaagttccttattggcttcaaatgggcgtctctgattcagtttttccaaaacatctttgacgatgtccttaatgaagtctgattcaatccta 306  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16336248 aattccaacaagttccttattggcttcaaatgggcgtccgtgattcagtttttccaaaacatctttgacgatgtccttaatgaagtccgattcaatccta 16336149  T
Q  307 ccatatgaatggaaagggggaaaataggtcaacattcatgttgtgctgataataattatataaataattttttaggggaagtgcataaaatttgttgtca 406  Q
    ||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  16336148 ccatatgaatggaaagggaataaaaaggtcaacattcatgttgtgctgataataattatataaataattttttaggggaattgcataaaatttgttatca 16336049  T
Q  407 ttatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtagg-tgattagtgttctattattttttctaggcaatg 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  16336048 ttatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtaggttgattagtgctctattattttttctaggcaatg 16335949  T
Q  506 aatttccaaagcaatataatgaagtattaaaagaatatagccaaagatgaatgatggatcgtactacttcttaaaatcgtgagatatgagt--------- 596  Q
    ||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||||||||||||             
T  16335948 aatttccaaagcaaattaatgaagtattaaaagaatatagccaatgattaatgatggatcgtacaacttcttaaaattgtgagatatgagtattgagggt 16335849  T
Q  597 ---aaaaaactatcaatgtttgaaagtgttttcttcaagttgaattcaaaataaactgtgactctcaaaattaggggtggcaatttgatccatccattcg 693  Q
       | || | |||||||||||||||    |||||||||||       ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16335848 acaacaataatatcaatgtttgaaaaaaatttcttcaagt-------aaaataaactgtgactctcaaaattaccggtggcaatttgatccatccattcg 16335756  T
Q  694 atacatctattgattaattcattgaatgcatttatcaaataaaaa 738  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  16335755 atacatctattgattaattcatcgaatgcatttatcaaataaaaa 16335711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 7 - 540
Target Start/End: Original strand, 16122752 - 16123286
Alignment:
Q  7 acaacattgaatccacacctagttgattcttcccttacattttcgaggaaacaatgatattcgaattgagaacaatatttatcatataannnnnnngcta 106  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||    
T  16122752 acaactttgagtccacacttagttgattcttcccttacattttcgaggaaacaatgatattcgaattgagaacaatagttatcatataatttttttgcta 16122851  T
Q  107 gagaggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttgacccattattcgttaacaatttaatctctgcatacttttcttc 206  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||    
T  16122852 gagcggtctttcctatgccccccatgccccataatccaagcgttctaacatcatttgacccattattcgttaacaattcaatctcttcatattttttttc 16122951  T
Q  207 aattccaacaagttccttattggcttcaaatgggcgtctctgattcagtttttccaaaacatctttgacgatgtccttaatgaagtctgattcaatccta 306  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16122952 aattccaacaagttccttattggcttcaactgggcgtctctgattcagtttttccaaaacatctttaacgatgtccttaatgaagtctgattcaatccta 16123051  T
Q  307 ccatatgaatggaaagggggaaaataggtcaacattcatgttgtgctgataataattatataaataattttttaggggaagtgcataaaatttgttgtca 406  Q
     |||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  16123052 acatatgaatggaaagggaaaaaaaaggtcaacattcatgttgtcctgataataattatatacataatgttttaggggaattgcataaaatttgttgtca 16123151  T
Q  407 ttatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtagg-tgattagtgttctattattttttctaggcaatg 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  16123152 ttatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtaggttgattagttttctattattttttctaggcaatg 16123251  T
Q  506 aatttccaaagcaatataatgaagtattaaaagaa 540  Q
    ||||||||||||||  |||||||||||||||||||    
T  16123252 aatttccaaagcaaattaatgaagtattaaaagaa 16123286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 1481811 - 1482059
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1481811 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 1481910  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1481911 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccatt 1482010  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1482011 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 1482059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 1520176 - 1520424
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  1520176 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 1520275  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1520276 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 1520375  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1520376 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 1520424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 25853517 - 25853269
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25853517 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 25853418  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25853417 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccatt 25853318  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  25853317 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 25853269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 733 - 987
Target Start/End: Complemental strand, 45505877 - 45505622
Alignment:
Q  733 taaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattc 832  Q
    |||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  45505877 taaaaaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaattttcaaaaagcctattc 45505778  T
Q  833 cttcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcac 932  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45505777 cttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcac 45505678  T
Q  933 gtccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  45505677 gtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 45505622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 44143360 - 44143608
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44143360 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 44143459  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44143460 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtccatt 44143559  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  44143560 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttc 44143608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 743 - 987
Target Start/End: Complemental strand, 2390768 - 2390523
Alignment:
Q  743 tttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttttt 842  Q
    |||||||| || |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2390768 tttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttttt 2390669  T
Q  843 ggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 942  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390668 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 2390569  T
Q  943 gatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  2390568 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 2390523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 755 - 987
Target Start/End: Original strand, 43577018 - 43577251
Alignment:
Q  755 caccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaa 854  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43577018 caccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccca 43577117  T
Q  855 aaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaa 954  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577118 aaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaa 43577217  T
Q  955 aattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||| |||||||||||||| ||||||||    
T  43577218 aattcgaagcaaatcaggttagcaagtgttgttc 43577251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 13196222 - 13195974
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13196222 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 13196123  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    | ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13196122 tgtggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctatt 13196023  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  13196022 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttc 13195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 21657927 - 21658175
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  21657927 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 21658026  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21658027 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaactatactttctcacgtccatt 21658126  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  21658127 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 21658175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 39697862 - 39697614
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  39697862 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 39697763  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39697762 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39697663  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  39697662 catgatttcaaagaaaattagaagcaaatcaggttagcaagtgttgttc 39697614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 42342968 - 42343216
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  42342968 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 42343067  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42343068 tttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 42343167  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42343168 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 42343216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 3178226 - 3178474
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  3178226 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 3178325  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3178326 tttggttacaccccaaaacccttcttccaaagccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 3178425  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  3178426 catgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttc 3178474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 40811857 - 40811609
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  40811857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgaaaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 40811758  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811757 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatagattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40811658  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  40811657 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttc 40811609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 34202279 - 34202527
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  34202279 gagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 34202378  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  34202379 tttggttacaccccaaaacccttcttcaaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatattttctcacgtccatt 34202478  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34202479 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 34202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 37094088 - 37094336
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| |||||||||||||||||||  ||||||||| || |||| | ||||||||||||||||||||||||||||||||||||||||    
T  37094088 gagtttttctacttgcactctagttaatcatggttgcataccaaaatgataagattatcttttcataaaatttgattttcaaaaagcctattccttcttt 37094187  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37094188 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccatt 37094287  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37094288 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 37094336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 10638778 - 10639025
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||||||  | |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  10638778 gagtttttctacctgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 10638877  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  10638878 cttggttacaccccaaa-cccctcttccaaaaccataattctccaatcgatcgattctgttatgcgaagattttcaaaaccatactttctcacgtccatt 10638976  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||| ||| |||||||||||||||| |||||||||||||| ||||||||    
T  10638977 catggttttaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 10639025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 740 - 923
Target Start/End: Original strand, 15011819 - 15012002
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15011819 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 15011918  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccata 923  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15011919 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccata 15012002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 735 - 987
Target Start/End: Original strand, 927059 - 927292
Alignment:
Q  735 aaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcct 834  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  927059 aaaaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcct 927158  T
Q  835 tcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 934  Q
    ||||||      |||||| ||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  927159 tctttt------acaccccaaaacc--------------ataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 927238  T
Q  935 ccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  927239 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 927292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 532 - 738
Target Start/End: Original strand, 16123459 - 16123677
Alignment:
Q  532 ttaaaagaatatagccaaagatgaatgatggatcgtactacttcttaaaatcgtgagatatgagtaa------------aaaactatcaatgtttgaaag 619  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||             || | ||||||||||||||||    
T  16123459 ttaaaagaatatagccaatgatgaatgttggatcgtactacttcttaaaattgtgagatatgaatatttaaggtacaacaataatatcaatgtttgaaag 16123558  T
Q  620 tgttttcttcaagttgaattcaaaataaactgtgactctcaaaattaggggtggcaatttgatccatccattcgatacatctattgattaattcattgaa 719  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||| |||    
T  16123559 tgttttcttcaagttgaatgcaaaataaactgtgactctcaaaattagggatgataatttgatccatccattcgatacatctattgcttaattcatcgaa 16123658  T
Q  720 tgcatttatcaaataaaaa 738  Q
    ||||||||||||| |||||    
T  16123659 tgcatttatcaaacaaaaa 16123677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 809 - 987
Target Start/End: Original strand, 874953 - 875119
Alignment:
Q  809 atttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaag 908  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||     
T  874953 atttgattttcaaaaagcctattccttatttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcaatcgatcgtgttctgcgaa- 875051  T
Q  909 attttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
                ||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||    
T  875052 ------------atactctctcacgtccattcacgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttc 875119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 4331966 - 4331840
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |  |||||| |||    
T  4331966 gagtttttctaattacaccctctttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagacacttcctttttt 4331867  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  4331866 cttggttacaccctaaaatccctcttc 4331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 739 - 866
Target Start/End: Complemental strand, 38629495 - 38629368
Alignment:
Q  739 cgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 838  Q
    |||||||||||| || ||||||  |||||| |||||||| || ||||||| ||||||| ||||||||||||||| |||||||||||| || |||||| ||    
T  38629495 cgagtttttctaattacaccctctttaatcctggttgcatcctaaaatgataaaattatcctttcataaaatttaattttcaaaaagactcttccttttt 38629396  T
Q  839 ttttggttacacccaaaaacccctcttc 866  Q
    | |||||||||||| |||| ||||||||    
T  38629395 tcttggttacaccctaaaatccctcttc 38629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 13480634 - 13480508
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| || |||||||  ||||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||    
T  13480634 gagtttttctaattacaccatgtttaatcctgattgcaccttaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcattttcctttttt 13480535  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  13480534 cttggttacaccctaaaatccctcttc 13480508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 740 - 865
Target Start/End: Original strand, 26170976 - 26171101
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| | ||  || |||    
T  26170976 gagtttttctaattacaccctgtttaatcttggttgcaccccaaaataacaaaattacccttccataaaatttaattttcaaaaagcatctttttttttt 26171075  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     |||||||||||| |||| |||||||    
T  26171076 cttggttacaccctaaaatccctctt 26171101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 740 - 811
Target Start/End: Complemental strand, 32551752 - 32551681
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatt 811  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32551752 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 740 - 811
Target Start/End: Original strand, 35895492 - 35895563
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatt 811  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  35895492 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatt 35895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 7722758 - 7722632
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  |||||||||| |||||||| |||||||||||| |||||||||| |||| |||||||| | |||||| |||    
T  7722758 gagtttttctaattacaccctgtttaattctggttgcacctcaaaatgataaaattacccttccataaaatttaatttacaaaaagcatcttcctttttt 7722659  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  7722658 cttggttacaccctaaaatctctcttc 7722632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 740 - 865
Target Start/End: Original strand, 44798809 - 44798933
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || ||||||  |||||| ||||| |||  ||||||||||||||||| |||||||||||||| | ||||||||||||| |||||| |||    
T  44798809 gagtttttttaattacaccctgtttaatcctggttacacttcaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcctt-ttt 44798907  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     | |||||||||| ||||||||||||    
T  44798908 ctcggttacaccccaaaacccctctt 44798933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 740 - 865
Target Start/End: Complemental strand, 45443640 - 45443516
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| || || |||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||| || |||    
T  45443640 gagtttttctaattacaccatgtttaatcctgattacacctcaaaatgataaaattaccctttcataaaatttaattttcaaaaagcctcttcatt-ttt 45443542  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     | |||||||||| ||||||||||||    
T  45443541 ctcggttacaccccaaaacccctctt 45443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 770 - 866
Target Start/End: Complemental strand, 44456867 - 44456771
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||| ||||  |||||||    
T  44456867 tggttgcatcctaaaatgataaaattaccctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaattcctcttc 44456771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 458694 - 458568
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||  |||||| |||||||| || ||||||| ||||||| | ||  ||||||||| ||||||||||||| | |||||| |||    
T  458694 gagtttttctaattacactctgtttaatcctggttgcatcctaaaatgataaaattatcattctataaaatttaattttcaaaaagcatcttcctttttt 458595  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  458594 cttggttacaccctaaaattcctcttc 458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 776 - 862
Target Start/End: Complemental strand, 31569708 - 31569622
Alignment:
Q  776 caccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    ||||| ||||||||||||||| |||| |||||||||| ||||||||||||| | |||||| ||| ||||||||| || |||| ||||    
T  31569708 caccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacatcctaaaatccct 31569622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 781 - 851
Target Start/End: Complemental strand, 10554807 - 10554738
Alignment:
Q  781 caaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacc 851  Q
    |||||||| |||||||| |||| ||||||||| ||||||||||||||| |||||| ||| |||||||||||    
T  10554807 caaaatgataaaattactcttttataaaatttaattttcaaaaagcctcttcctt-tttcttggttacacc 10554738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 812
Target Start/End: Complemental strand, 27980978 - 27980924
Alignment:
Q  758 cctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    |||| |||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  27980978 cctacttaatcatggttacaccccaaaatgacaagattatcctttcataaaattt 27980924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 812
Target Start/End: Complemental strand, 28067508 - 28067454
Alignment:
Q  758 cctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    |||| |||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  28067508 cctacttaatcatggttacaccccaaaatgacaagattatcctttcataaaattt 28067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 782 - 866
Target Start/End: Complemental strand, 40659278 - 40659197
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||  || | |||||| || |||||||||||||    
T  40659278 aaaatgaaaaaattacccttttataaaatttaatttt-aaaaagcctattccttc--ttctcgttacatcccaaaacccctcttc 40659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 764 - 839
Target Start/End: Complemental strand, 5109256 - 5109181
Alignment:
Q  764 taatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||| ||||| ||| | |||||||||||||||  ||| |||||||||| ||||||||||| ||| ||||||||||    
T  5109256 taatcctggttacactctaaaatgacaaaattattcttacataaaatttaattttcaaaaaacctcttccttcttt 5109181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 782 - 852
Target Start/End: Complemental strand, 16313626 - 16313556
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccc 852  Q
    ||||||| |||||||  |||| ||||||||| ||||||||||||| | |||||| ||| ||| ||||||||    
T  16313626 aaaatgataaaattaatcttttataaaatttaattttcaaaaagcatcttccttttttcttgcttacaccc 16313556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 735 - 987
Target Start/End: Complemental strand, 42724284 - 42724031
Alignment:
Q  735 aaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcct 834  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42724284 aaaaggagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcct 42724185  T
Q  835 tcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 934  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42724184 tcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 42724085  T
Q  935 ccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42724084 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 42724031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 39540499 - 39540251
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39540499 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 39540400  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39540399 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39540300  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  39540299 catgatttcaaagaaaattcgaaacaaatcaggttagcaagtgttgttc 39540251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 56362818 - 56363066
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  56362818 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 56362917  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56362918 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 56363017  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  56363018 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 56363066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 726 - 987
Target Start/End: Original strand, 20434147 - 20434410
Alignment:
Q  726 tatcaaataaaaac-gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaa 824  Q
    ||||||||| |||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20434147 tatcaaatacaaactgagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaa 20434246  T
Q  825 gcctattccttcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatac 924  Q
    |||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434247 gcctattccttcttttttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatac 20434346  T
Q  925 tttctcacgtccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  20434347 tttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 20434410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 740 - 986
Target Start/End: Complemental strand, 55215691 - 55215444
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  55215691 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 55215592  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55215591 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 55215492  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgtt 986  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  55215491 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 55215444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 10542130 - 10541882
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  10542130 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattctttcttt 10542031  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10542030 cttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 10541931  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  10541930 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 10541882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 19874220 - 19873972
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19874220 gagtttttctacttgcaccctacttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 19874121  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19874120 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 19874021  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  19874020 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 19873972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 52913291 - 52913043
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  52913291 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 52913192  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52913191 tttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 52913092  T
Q  940 catgatttcaaagaaaattcgaag-caatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  52913091 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttc 52913043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 53875208 - 53874960
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  53875208 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttcttt 53875109  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53875108 tttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 53875009  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  53875008 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 53874960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 55219867 - 55220115
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  55219867 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 55219966  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55219967 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatccatt 55220066  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  55220067 catgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttc 55220115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 738 - 987
Target Start/End: Complemental strand, 37234305 - 37234055
Alignment:
Q  738 acgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttct 837  Q
    ||||||||||||| || |||| |||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  37234305 acgagtttttctacttgcaccttagttaattatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 37234206  T
Q  838 tttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 937  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37234205 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 37234106  T
Q  938 ttcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37234105 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 37234055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 739 - 987
Target Start/End: Complemental strand, 55183626 - 55183377
Alignment:
Q  739 cgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 838  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  55183626 cgagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattactctttcataaaatttgattttcaaaaagcctattccttctt 55183527  T
Q  839 ttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 938  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  55183526 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaataccatactttctcacgtccat 55183427  T
Q  939 tcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  55183426 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 55183377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 28406536 - 28406288
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  28406536 gagtttttctccttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagtctattccttcttt 28406437  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28406436 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 28406337  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  28406336 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 28406288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 38291953 - 38291705
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||  |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  38291953 gagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttcttt 38291854  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38291853 tttggttacaccctaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 38291754  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38291753 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 38291705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 42348660 - 42348908
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  42348660 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 42348759  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42348760 tttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 42348859  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42348860 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 42348908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 613823 - 614071
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  613823 gagtttttctacttgcaccccagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctct 613922  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  613923 tttggttacaccccaaaacccttcttccaaaaccataattctgcaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 614022  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  614023 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 614071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 52839830 - 52839582
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52839830 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaacgacaaaattaccctttcataaaatttgattttcaaaaagcttattccttcttt 52839731  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52839730 tttggttacaccccaaaacccttcttccaaaaccatgattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 52839631  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  52839630 catgatttcaaagaaaattcgaagcaaatcaggttatcaagtgttgttc 52839582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 53036113 - 53035868
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||    
T  53036113 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaa---cctattccttcttt 53036017  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53036016 tttggttacaccccaaaacccttcttccaaaaccataattatccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 53035917  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  53035916 catgatttcaaagaaaattcgaagcaaatcaggttagcaaatgttgttc 53035868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 25857541 - 25857788
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  25857541 gagtttttctacttgcaccctaat-aatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttcttt 25857639  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25857640 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccatt 25857739  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  25857740 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 25857788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 23895293 - 23895044
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  23895293 gagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 23895194  T
Q  840 ttt-ggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 938  Q
    ||| |||||||||| ||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895193 ttttggttacaccccaaaaccattcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 23895094  T
Q  939 tcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  23895093 tcatgatttcgaagaaaattcgaagcaaatcaggttagcaagtgttgttc 23895044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 52307555 - 52307307
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||| || ||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||||    
T  52307555 gagtttttctacttacaccctagttaatcatggttgcatcctaaaatgataagattatcctttcataaaatttaattttcaaaaagcctattccttcttt 52307456  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  52307455 cttggttacaccccaaaattcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgatgatttttaaaatcatactttctcacgtccatt 52307356  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  52307355 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 52307307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 740 - 898
Target Start/End: Complemental strand, 43830315 - 43830157
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||  || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43830315 gagtttttctccttgcaccctagttaatcatggttgcacctcaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttcttt 43830216  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtg 898  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||    
T  43830215 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtg 43830157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 12895968 - 12895661
Alignment:
Q  9 aacattgaatccacacctagttgattcttcccttacattttcgaggaaacaatgatattcgaattgagaacaatatttatcatataannnnnnngctaga 108  Q
    |||||||| ||||| ||| |||||||| ||||| |||||||| | ||| || |||  ||| |||||||||||  ||||| ||||||        ||||||    
T  12895968 aacattgagtccacgcctggttgattcctccctaacattttcaatgaagcagtgacgttcaaattgagaacacaatttagcatatagatctttagctaga 12895869  T
Q  109 gaggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttgacccattattcgttaacaatttaatctctgcatacttttcttcaa 208  Q
    | ||||||||||||||| ||||||||||| || ||||| ||| ||||||||||||||||| | ||| ||||| ||| || |||| || ||||||  ||||    
T  12895868 gtggtctttcctatgccgcccatgccccaaaacccaagggttttaacatcatttgacccaattttcattaacgattcaacctcttcacactttttatcaa 12895769  T
Q  209 ttccaacaagttccttattggcttcaaatgggcgtctctgattcagtttttccaaaacatctttgacgatgtccttaatgaagtctgattcaatcctacc 308  Q
    |||||||||||||||||||  ||||||||||| || |  ||||||  |||| ||||||||||| ||| |||||||| ||||| | ||||||| |||||||    
T  12895768 ttccaacaagttccttattaacttcaaatgggtgtttacgattcaactttttcaaaacatcttcgacaatgtcctttatgaaatttgattcagtcctacc 12895669  T
Q  309 atatgaat 316  Q
    ||||||||    
T  12895668 atatgaat 12895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 43458489 - 43458363
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||  | |||||| |||    
T  43458489 gagtttttataattacaccctgtttaatcatggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatcttcctttttt 43458390  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  43458389 cttggttacaccctaaaatccctcttc 43458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 47467505 - 47467379
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||| ||||||| | |||||| |||    
T  47467505 gagtttttctaattacaccctgtttaatcatggttgcatcccaaaatgacaaaattacccttccataaaatttagtttttaaaaagcatcttcctttttt 47467406  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  47467405 cttggttacaccctaaaatccctcttc 47467379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 24034518 - 24034644
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  |||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  24034518 gagtttttctaattacaccctgtttaattctggttgtaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 24034617  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  24034618 cttggttacaccctaaaatctctcttc 24034644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 740 - 865
Target Start/End: Original strand, 24896985 - 24897109
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| ||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||||| |||||| |||    
T  24896985 gagtttttctaattacaccttgtttaatcctggttacaccccaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcctt-ttt 24897083  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     | |||||||||| ||||||||||||    
T  24897084 gtcggttacaccccaaaacccctctt 24897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 20737690 - 20737762
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20737690 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 20737762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 40430145 - 40430248
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| | ||| || ||| |||||||||||| |||| ||||    
T  40430145 ttaatcctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttctttttttcttggttacaccctaaaatccct 40430244  T
Q  863 cttc 866  Q
    ||||    
T  40430245 cttc 40430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 763 - 865
Target Start/End: Complemental strand, 49400 - 49298
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| |||| ||||    
T  49400 ttaatcttggttgcactctaaaatgacaaaattaccctttcataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaatccct 49301  T
Q  863 ctt 865  Q
    |||    
T  49300 ctt 49298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 765 - 866
Target Start/End: Original strand, 11682233 - 11682334
Alignment:
Q  765 aatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctct 864  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||| |||| ||||||    
T  11682233 aatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctct 11682332  T
Q  865 tc 866  Q
    ||    
T  11682333 tc 11682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 765 - 866
Target Start/End: Original strand, 11690512 - 11690613
Alignment:
Q  765 aatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctct 864  Q
    |||| ||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||| |||| ||||||    
T  11690512 aatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctct 11690611  T
Q  865 tc 866  Q
    ||    
T  11690612 tc 11690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 737 - 866
Target Start/End: Complemental strand, 35339745 - 35339616
Alignment:
Q  737 aacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttc 836  Q
    |||||||||||||| || |||| |  |||||| ||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||| | ||| ||     
T  35339745 aacgagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaagattacccttccataaaatttaattttcaaaaagcatcttcattt 35339646  T
Q  837 ttttttggttacacccaaaaacccctcttc 866  Q
    ||| |||||||||||  |||| ||||||||    
T  35339645 tttcttggttacaccataaaatccctcttc 35339616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 56018791 - 56018719
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  56018791 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 56018719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 22301842 - 22301719
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| |  ||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||     
T  22301842 gagtttttctaatcacaccctgtttaatcctggttgcaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttc 22301744  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    |  |  ||||||| |||||||||||||    
T  22301743 tcgg--tacaccccaaaacccctcttc 22301719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 1522783 - 1522909
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| ||  |||||  |||||| |||||||| || |||||||||||||||| ||| |||||||||| ||||||||||||| | || ||| |||    
T  1522783 gagtttttctaattataccctgtttaatcctggttgcatcctaaaatgacaaaattactcttccataaaatttaattttcaaaaagcatctttctttttt 1522882  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  1522883 cttggttacaccctaaaatccctcttc 1522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 3026381 - 3026507
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| ||  |||||  | |||| || ||||| || |||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  3026381 gagtttttctaattaaaccctgttaaatcctgattgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 3026480  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  3026481 cttggttacaccctaaaatccctcttc 3026507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 13962575 - 13962450
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| | ||||||||||||||||||||||||||| || ||||||| || ||||||||||||| |  ||||| |||    
T  13962575 gagtttttctaattacaccctgtttaatcctagttgcaccccaaaatgacaaaattacctttccataaaa-ttaattttcaaaaagcatcatcctttttt 13962477  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  13962476 cttggttacaccctaaaatccctcttc 13962450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 22847104 - 22847230
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||| | |||| | |||    
T  22847104 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatcttttcataaaatttaattttcaaaaagcatcttccgttttt 22847203  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    |||  |||||||| ||||  |||||||    
T  22847204 ttttattacaccctaaaattcctcttc 22847230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 826
Target Start/End: Complemental strand, 28804066 - 28803980
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagc 826  Q
    ||||||||||| || ||||||  ||||||||||||| |||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  28804066 gagtttttctaattgcaccctgtttaatcatggttgtaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagc 28803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 41202443 - 41202317
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| ||||||||||||||||||||| ||||| |||| |||||||||| |||||||||| || | |||||| |||    
T  41202443 gagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaatgcatcttcctttttt 41202344  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  41202343 cttggttacaccctaaaattcctcttc 41202317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 48990345 - 48990468
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| |||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||    || || |||    
T  48990345 gagtttttctaattacaccctatttaatcctcgttgcaccctaaaatgataaaattacccttccataaaatttaattttcaaaaagc---atcttttttt 48990441  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  48990442 cttggttacaccctaaaatccctcttc 48990468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 51322672 - 51322775
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||| | || ||| ||| |||||||||||  |||| ||||    
T  51322672 ttaatcttggttgcacctcaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatttttcttttttcttggttacaccataaaatccct 51322771  T
Q  863 cttc 866  Q
    ||||    
T  51322772 cttc 51322775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 43621672 - 43621546
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| || ||||| || ||||||||||||||| ||||| ||||||||| ||||||||||| | | |||||| |||    
T  43621672 gagtttttctaattacaccctttttaatcctgattgcatcctaaaatgacaaaattatccttttataaaatttaattttcaaaaatcatcttcctttttt 43621573  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  43621572 cttggttacaccctaaaatctctcttc 43621546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 763 - 856
Target Start/End: Original strand, 8713247 - 8713338
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaa 856  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| || | ||||||||||||||    
T  8713247 ttaatccttgttacaccccaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc-ttctcggttacacccaaaa 8713338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 740 - 862
Target Start/End: Complemental strand, 48349582 - 48349460
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| |||||| || | ||||||| ||||||||| ||| ||||||||| |||||||||||| || |||||| |||    
T  48349582 gagtttttctaattacaccttgtttaatcctggttgtactctaaaatgataaaattacctttttataaaatttaattttcaaaaagactcttcctttttt 48349483  T
Q  840 tttggttacacccaaaaacccct 862  Q
     |||||||||||| |||| ||||    
T  48349482 cttggttacaccctaaaatccct 48349460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 607 - 664
Target Start/End: Complemental strand, 12895464 - 12895407
Alignment:
Q  607 caatgtttgaaagtgttttcttcaagttgaattcaaaataaactgtgactctcaaaat 664  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  12895464 caatgtttgaaagtgttttcttcaacttgaatacaaaataaactgtgcctctcaaaat 12895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 741 - 857
Target Start/End: Complemental strand, 30217220 - 30217104
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || |  |||| |||||| ||||||||    ||||||||||||||| |||| |||||||||| ||||||||||||| | |||||| |||     
T  30217220 agtttttctaattacgtcctatttaatcctggttgcatttaaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttc 30217121  T
Q  841 ttggttacacccaaaaa 857  Q
    |||||||||||| ||||    
T  30217120 ttggttacaccctaaaa 30217104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 37828775 - 37828877
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||   |||||| ||||||||||||| ||||||||||| ||||||||||| | | |||||| |||||||||||||||| |||  ||||    
T  37828775 ttaatcttggttgcatatcaaaataacaaaattaccctctcataaaatttaattttcaaaaaacatcttcctt-ttttttggttacaccctaaattccct 37828873  T
Q  863 cttc 866  Q
    ||||    
T  37828874 cttc 37828877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 740 - 851
Target Start/End: Original strand, 50561564 - 50561674
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||  |||||| ||||||||| | |||||||||||||||||||| ||||||| || ||||||||||||| | || ||| |||    
T  50561564 gagtttttctaattacactctgtttaatcctggttgcactctaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatctttctttttt 50561662  T
Q  840 tttggttacacc 851  Q
     |||||||||||    
T  50561663 cttggttacacc 50561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 866
Target Start/End: Original strand, 34159011 - 34159136
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || |||| |  |||||  |||||||| |  ||||||||||||||| ||||  ||||||||| ||||||||||||| | ||| || |||     
T  34159011 agtttttctaattacaccttgtttaattctggttgcatcttaaaatgacaaaattatccttctataaaatttaattttcaaaaagcatcttcattttttc 34159110  T
Q  841 ttggttacacccaaaaacccctcttc 866  Q
    |||||||||||| |||| ||||||||    
T  34159111 ttggttacaccctaaaatccctcttc 34159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 793 - 866
Target Start/End: Original strand, 36851458 - 36851531
Alignment:
Q  793 attaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||||||||||||||| |||||||||||| || |||||| ||| || ||||||||| |||| ||||||||    
T  36851458 attaccctttcataaaatttaattttcaaaaagactcttccttttttcttagttacaccctaaaatccctcttc 36851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 31709715 - 31709787
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||| |||||||||||||||||  |||||||||| |||| ||||| |||||||||    
T  31709715 gagtttttctacttgcaccctaattaatcatggttgcaccttaaaatgacaagattatccttttataaaattt 31709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 770 - 852
Target Start/End: Original strand, 32932614 - 32932696
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccc 852  Q
    |||||||| | |||||||||||||||||  ||||||||||||| ||||| ||||||| | ||| || ||| ||||||||||||    
T  32932614 tggttgcatctcaaaatgacaaaattacattttcataaaatttaattttaaaaaagcatcttctttttttcttggttacaccc 32932696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 740 - 826
Target Start/End: Complemental strand, 51322487 - 51322401
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagc 826  Q
    ||||||||||| || ||| ||  |||||  |||||||| ||||||| || |||||||||||| |||||||||| |||||||||||||    
T  51322487 gagtttttctaattacactctgtttaattctggttgcatcccaaaaggataaaattacccttccataaaatttaattttcaaaaagc 51322401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 32135398 - 32135479
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||| |  |  ||||||| |||||||||||||    
T  32135398 aaaatgacaaaattaccttttcataaaatttaatttt-aaaaagcctcttccttcttctcgg--tacaccccaaaacccctcttc 32135479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 866
Target Start/End: Complemental strand, 47429933 - 47429803
Alignment:
Q  734 aaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcc 833  Q
    ||||| ||||||||||| || ||  ||| |||||| |||||||| || ||||||| |||||||| ||||||||||| || ||||| ||||| | | |||     
T  47429933 aaaaaagagtttttctaattacattctatttaatcctggttgcatcctaaaatgataaaattactctttcataaaa-ttaatttttaaaaatcatcttca 47429835  T
Q  834 ttcttttttggttacacccaaaaacccctcttc 866  Q
    || |||||| ||||||||| |||| ||||||||    
T  47429834 tt-tttttttgttacaccctaaaatccctcttc 47429803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 391 - 478
Target Start/End: Complemental strand, 12895610 - 12895523
Alignment:
Q  391 ataaaatttgttgtcattatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtaggtgatta 478  Q
    ||||||||| ||||||   ||||| || ||||||||||||||||||| ||| |  ||||||| ||| |||||||||||||||| ||||    
T  12895610 ataaaatttattgtcaacgtgattaagcaagaaagaaggaaaaaatatattcctcgaaatgagaatccaaagatagagtaggtaatta 12895523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 37683359 - 37683236
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| |  ||||||  |||||| ||||| ||| |||||||| |||||||| | ||||||||||||| ||||| ||||||| | |||||||  |    
T  37683359 gagtttttctaatcacaccctgtttaatcctggttacactccaaaatgtcaaaattatcatttcataaaatttaatttt-aaaaagcatcttccttc--t 37683263  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    | | ||||||||| |||| ||||||||    
T  37683262 tctcgttacaccccaaaatccctcttc 37683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 763 - 848
Target Start/End: Original strand, 7318450 - 7318536
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaatta-ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttac 848  Q
    |||||| || ||||||| |||||| ||||||||| ||||| |||||||||| ||||||||||||| | || ||| ||| ||||||||    
T  7318450 ttaatcctgattgcacctcaaaattacaaaattatcccttccataaaatttaattttcaaaaagcatctttcttttttcttggttac 7318536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 773 - 866
Target Start/End: Complemental strand, 20293360 - 20293267
Alignment:
Q  773 ttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||  ||||||| ||||||| ||||   |||||||| |||||||||| || | |||||| ||| |||||||||||| |||| ||||||||    
T  20293360 ttgcaccttaaaatgataaaattatccttctttaaaatttaattttcaaaatgcatcttccttttttcttggttacaccctaaaatccctcttc 20293267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 857
Target Start/End: Original strand, 50469063 - 50469180
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||  |||||| |||||| || | ||||||| ||||||| ||||  ||||| ||| ||||| ||||||| | |||||| |||    
T  50469063 gagtttttctaattacatcctgtttaatcctggttgtactctaaaatgataaaattatccttctataaactttaatttttaaaaagcatcttcctttttt 50469162  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  50469163 cttggttacaccctaaaa 50469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 213; Significance: 1e-116; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 43247037 - 43246789
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43247037 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 43246938  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246937 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43246838  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  43246837 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 43246789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 46322126 - 46321878
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46322126 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 46322027  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46322026 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 46321927  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  46321926 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 46321878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 26015946 - 26015698
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26015946 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 26015847  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26015846 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtccatt 26015747  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26015746 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 26015698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 38876134 - 38875886
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38876134 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 38876035  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38876034 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 38875935  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38875934 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 38875886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 46923878 - 46924126
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46923878 gagtttttctacttgcaccatagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 46923977  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46923978 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 46924077  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  46924078 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 46924126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 47066020 - 47065772
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47066020 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 47065921  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47065920 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 47065821  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  47065820 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 47065772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 21279149 - 21278901
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  21279149 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttcttt 21279050  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21279049 tttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 21278950  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  21278949 catgatttcaaagaaaattcgaagcaaattaggttagcaagtgttgttc 21278901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 32542263 - 32542015
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32542263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 32542164  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  32542163 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttttcacgtccatt 32542064  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  32542063 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 32542015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 7900433 - 7900681
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7900433 gagtttttttacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 7900532  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7900533 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 7900632  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  7900633 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttc 7900681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 8203521 - 8203273
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8203521 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 8203422  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8203421 tttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8203322  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8203321 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 8203273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 8215998 - 8215750
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8215998 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 8215899  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8215898 tttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8215799  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8215798 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 8215750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 38283671 - 38283423
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  38283671 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 38283572  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     ||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283571 cttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 38283472  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38283471 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 38283423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 40995187 - 40995435
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  40995187 gagtttttctacttgcaccctanttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattatcaaaaagcatattccttcttt 40995286  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995287 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40995386  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  40995387 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 40995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 25876776 - 25877024
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  25876776 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagcatattccttcttt 25876875  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25876876 cttggttacaccccaaaacccctcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 25876975  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  25876976 catgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttc 25877024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 34591676 - 34591924
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  34591676 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctttttt 34591775  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34591776 ttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 34591875  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34591876 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 34591924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 40705592 - 40705345
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||    
T  40705592 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattgccctttcataaaatttgattttcaaaaagcctattccttcatt 40705493  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    || |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40705492 tt-ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40705394  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  40705393 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 40705345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 738 - 987
Target Start/End: Original strand, 7790901 - 7791152
Alignment:
Q  738 acgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttct 837  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  7790901 acgagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaatgcctattccttct 7791000  T
Q  838 tttttg-gttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 936  Q
    |||||  ||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7791001 tttttttgttacaccccaaaaatcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 7791100  T
Q  937 attcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  7791101 attcatgatttcaaagcaaattcgaagcaaatcaggttagcaagtgttgttc 7791152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 27324955 - 27325203
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||||||||| |||||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27324955 gagtttttctacttgcatcctagttaattatggttgcactccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 27325054  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27325055 tttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 27325154  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  27325155 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 27325203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 47779589 - 47779341
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  47779589 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 47779490  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  47779489 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatattttctcacgtccatt 47779390  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
     |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  47779389 tatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 47779341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 738 - 987
Target Start/End: Complemental strand, 40994895 - 40994645
Alignment:
Q  738 acgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttct 837  Q
    ||||||||||||| ||  || |||||||||||||||||||||  ||||| || | |||| ||||| |||||||||||||||||||||| |||||||||||    
T  40994895 acgagtttttctacttaaactctagttaatcatggttgcaccataaaataacgagattatccttttataaaatttgattttcaaaaagtctattccttct 40994796  T
Q  838 tttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 937  Q
    |||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40994795 tttttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttca 40994696  T
Q  938 ttcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||| ||||||||||||||| || ||||||||||| ||||||||    
T  40994695 ttcatgatttccaagaaaattcgaagcaaaccaggttagcaagtgttgttc 40994645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 32662448 - 32662221
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  32662448 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagtctattccttcttt 32662349  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||                     ||||||||||||||||||||||||||||||||||||||||    
T  32662348 tttggttacaccccaaaacccttcttccaaaaccataat---------------------tctgcgaagattttcaaaaccatactttctcacgtccatt 32662270  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  32662269 catgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttc 32662221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 740 - 827
Target Start/End: Original strand, 35924230 - 35924317
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcc 827  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35924230 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 35924317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 43775883 - 43776009
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| | |||||| |||    
T  43775883 gagtttttctaattacatcctatttaatcctggttgcaccccaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttcctttttt 43775982  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  43775983 cttggttacaccctaaaatctctcttc 43776009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 20492684 - 20492809
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| | |||||| |||    
T  20492684 gagtttttataattacaccctgattaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc-aaaagcatcttcctttttt 20492782  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  20492783 cttggttacaccctaaaatccctcttc 20492809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 24980855 - 24980981
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  24980855 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctttttt 24980954  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  24980955 cttggttacaccctaaaatctctcttc 24980981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 42095854 - 42095782
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42095854 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 42095782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 735 - 866
Target Start/End: Complemental strand, 45870258 - 45870127
Alignment:
Q  735 aaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcct 834  Q
    |||| ||||||||||| || |||| |  |||||  |||||||||| |||||||||||||||| |||| |||||||||| ||||||||||||| | |||||    
T  45870258 aaaaagagtttttctaattacaccatgtttaattctggttgcacctcaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcct 45870159  T
Q  835 tcttttttggttacacccaaaaacccctcttc 866  Q
    | ||| |||||||||||| |||| ||||||||    
T  45870158 tttttcttggttacaccctaaaatccctcttc 45870127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 763 - 852
Target Start/End: Complemental strand, 39597930 - 39597841
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccc 852  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| | |||||| ||| ||||||||||||    
T  39597930 ttaatcctggttgcaccccaaaatgacaaaattatcctgtcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccc 39597841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 852
Target Start/End: Complemental strand, 12847258 - 12847146
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||| | || ||| |||    
T  12847258 gagtttttctaattacaccctgtttaatcctggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatctttctttttt 12847159  T
Q  840 tttggttacaccc 852  Q
     ||||||||||||    
T  12847158 cttggttacaccc 12847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 39074436 - 39074364
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  39074436 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaattt 39074364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 43047166 - 43047094
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43047166 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaattt 43047094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 792 - 867
Target Start/End: Complemental strand, 19021090 - 19021015
Alignment:
Q  792 aattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttcc 867  Q
    |||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||| |||||||    
T  19021090 aattaccctttcataaaatttgattttcaaaaagtctcttccttattttttggttacaccccaaaacctctcttcc 19021015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 40862382 - 40862485
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| || |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||| ||||  |||    
T  40862382 ttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaattcct 40862481  T
Q  863 cttc 866  Q
    ||||    
T  40862482 cttc 40862485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 10594084 - 10594210
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||||||||| ||| ||||| |||| |||||||||| ||||| ||||||| | |||||| |||    
T  10594084 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaataacagaattaaccttccataaaatttaatttttaaaaagcatcttcctttttt 10594183  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  10594184 cttggttacaccctaaaattcctcttc 10594210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 42436565 - 42436462
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||| |||||||||||||||||| ||||||||| ||||||||||  |||||||||||| | ||| || ||| |||||||||||| |||| ||||    
T  42436565 ttaatcctggctgcaccccaaaatgacaagattacccttccataaaatttagttttcaaaaagcatcttcattttttcttggttacaccctaaaatccct 42436466  T
Q  863 cttc 866  Q
    ||||    
T  42436465 cttc 42436462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 30173546 - 30173420
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| ||  |||||| |||||| ||||||||   |||||||||||||||||| ||  ||||||||| ||||||||||| | | |||||| |||    
T  30173546 gagtttttctaattataccctatttaatcttggttgcatttcaaaatgacaaaattacctttctataaaatttaattttcaaaaaacatcttcctttttt 30173447  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    ||| ||||||||| |||| ||||||||    
T  30173446 ttttgttacaccctaaaatccctcttc 30173420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 36688819 - 36688694
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| | |||||| | |||||||||||||||| |||| ||||||| || ||||||||||||| | |||||| |||    
T  36688819 gagtttttctaattacaccctctttaatccttgttgcatctcaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagcatcttcctttttt 36688721  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  36688720 cttggttacaccctaaaatccctcttc 36688694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 40305557 - 40305431
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||  |||||  ||||||||||  ||||||||||||||||||||||| ||||||| |||||||||| || | | |||| |||    
T  40305557 gagtttttctaattacatcctgtttaattctggttgcacctaaaaatgacaaaattaccctttcaaaaaatttaattttcaaaatgcatctgcctttttt 40305458  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  40305457 cttggttacaccctaaaatccctcttc 40305431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 7883737 - 7883634
Alignment:
Q  763 ttaatcatggttgcacccc-aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccc 861  Q
    |||||| |||||||||||| ||||||| |||||||||||||||||||| || ||||||||||||| | |||||| ||| |||| ||||||| |||| |||    
T  7883737 ttaatcctggttgcacccccaaaatgaaaaaattaccctttcataaaa-ttaattttcaaaaagcatcttccttttttcttgggtacaccctaaaatccc 7883639  T
Q  862 tcttc 866  Q
    |||||    
T  7883638 tcttc 7883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 743 - 866
Target Start/End: Original strand, 241685 - 241807
Alignment:
Q  743 tttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttttt 842  Q
    |||||||| || ||||||  ||||||||| |||||||  ||||||| |||||||||||| ||||||| || ||||||||||||| | |||||| ||| ||    
T  241685 tttttctaattacaccctgtttaatcatgcttgcaccttaaaatgataaaattacccttccataaaa-ttaattttcaaaaagcatcttccttttttctt 241783  T
Q  843 ggttacacccaaaaacccctcttc 866  Q
    |||||||||  |||| ||||||||    
T  241784 ggttacaccataaaatccctcttc 241807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 29042144 - 29042269
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| | |||||||| |||||||||||||||| |||||||||||| || |||||||| |||| | ||| || |||    
T  29042144 gagtttttctaattacaccttgtttaatcctagttgcacctcaaaatgacaaaattatcctttcataaaa-ttaattttcaacaagcatcttcatttttt 29042242  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  29042243 cttggttacaccctaaaatccctcttc 29042269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 21874711 - 21874639
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || || ||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||    
T  21874711 gagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattattctttcataaaattt 21874639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 770 - 866
Target Start/End: Original strand, 48641965 - 48642060
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||| |||||||||| ||||||||||| |||||||| ||||| ||||| ||||||| | || ||||||| ||||||||| || ||||| |||||||    
T  48641965 tggttacaccccaaaacgacaaaattactctttcatagaattt-atttttaaaaagcatttttcttctttcttggttacatcctaaaactcctcttc 48642060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 847
Target Start/End: Complemental strand, 44709986 - 44709873
Alignment:
Q  734 aaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcc 833  Q
    ||||| ||||||||||| ||  |||||| |||||| |||||| | |  ||||||| ||||||| ||||| ||||||||| ||||||||||||| | |||     
T  44709986 aaaaaggagtttttctaattataccctatttaatcctggttgtatcataaaatgataaaattatccttttataaaatttaattttcaaaaagcatcttca 44709887  T
Q  834 ttcttttttggtta 847  Q
    || ||| |||||||    
T  44709886 ttttttcttggtta 44709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 740 - 857
Target Start/End: Original strand, 46101804 - 46101921
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || ||||||  |||||| || ||||||   ||||||||||||||| | ||  ||||||||| ||||||||||||| | |||||| |||    
T  46101804 gagtttttttaattacaccctgcttaatcctgattgcactttaaaatgacaaaattatctttctataaaatttaattttcaaaaagcatcttcctttttt 46101903  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  46101904 cttggttacaccctaaaa 46101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 47540332 - 47540417
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt-ttggttacacccaaaaacccctcttc 866  Q
    ||||||| ||||||| | || |||||||||| ||||||||||||| | |||||| |||| |||||||||||| |||| ||||||||    
T  47540332 aaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttcctttttttcttggttacaccctaaaatccctcttc 47540417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 47546889 - 47546974
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt-ttggttacacccaaaaacccctcttc 866  Q
    ||||||| ||||||| | || |||||||||| ||||||||||||| | |||||| |||| |||||||||||| |||| ||||||||    
T  47546889 aaaatgataaaattatcattccataaaatttaattttcaaaaagcatcttcctttttttcttggttacaccctaaaatccctcttc 47546974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 12428641 - 12428725
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||||||||||| |||| ||| |||||| ||||| ||||| | | |||||| ||| |||||||||||| |||| ||||||||    
T  12428641 aaaatgacaaaattatccttccatcaaatttaatttttaaaaaacatcttccttttttcttggttacaccctaaaatccctcttc 12428725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 740 - 864
Target Start/End: Original strand, 25764874 - 25764991
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |   ||||| ||||| |||| ||||||||||||||||||||| ||||||||||       ||||  ||| ||||||||||    
T  25764874 gagtttttctaattacaccatgtataatcctggttacacctcaaaatgacaaaattacccttgcataaaattt-------aaaatacctcttccttcttt 25764966  T
Q  840 tttggttacacccaaaaacccctct 864  Q
     || ||||||||| |||||||||||    
T  25764967 cttagttacaccccaaaacccctct 25764991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 19473980 - 19474061
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||||||| ||| ||||||||||||||| ||||| |||||| |||||||||| || | ||||||| || |||||||||||||    
T  19473980 aaaatgacaaa-ttatcctttcataaaatttaatttt-aaaaagtctattccttc-ttctcggttacatcctaaaacccctcttc 19474061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 779
Target Start/End: Original strand, 19687096 - 19687135
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcacc 779  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  19687096 gagtttttctacttgcaccctagttaatcatggttgcacc 19687135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 773 - 866
Target Start/End: Complemental strand, 48874434 - 48874341
Alignment:
Q  773 ttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||| | ||||| ||||||||| | ||  ||||||||| ||||||||||||| | ||| || ||| |||||||||||  |||| ||||||||    
T  48874434 ttgcactctaaaataacaaaattatctttctataaaatttaattttcaaaaagcatcttcattttttcttggttacaccttaaaatccctcttc 48874341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 20835679 - 20835431
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20835679 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 20835580  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20835579 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 20835480  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  20835479 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 20835431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 735 - 987
Target Start/End: Complemental strand, 22782009 - 22781756
Alignment:
Q  735 aaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcct 834  Q
    |||| ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22782009 aaaaagagtttttctacttgcaccctagttaatcatggttgcaccacaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcct 22781910  T
Q  835 tcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 934  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781909 tcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 22781810  T
Q  935 ccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22781809 ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 22781756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 10841529 - 10841281
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10841529 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 10841430  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10841429 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 10841330  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  10841329 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 10841281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 38871120 - 38871368
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38871120 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 38871219  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38871220 tttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 38871319  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38871320 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 38871368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 25710886 - 25711134
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25710886 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 25710985  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  25710986 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccatattttctcacgtccatt 25711085  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  25711086 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 25711134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 755 - 987
Target Start/End: Complemental strand, 33712705 - 33712472
Alignment:
Q  755 caccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaa 854  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33712705 caccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccca 33712606  T
Q  855 aaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaa 954  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33712605 aaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaa 33712506  T
Q  955 aattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||| |||||||||||||| ||||||||    
T  33712505 aattcgaagcaaatcaggttagcaagtgttgttc 33712472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 739 - 987
Target Start/End: Complemental strand, 37971772 - 37971523
Alignment:
Q  739 cgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 838  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||    
T  37971772 cgagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcattctt 37971673  T
Q  839 ttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 938  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37971672 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccat 37971573  T
Q  939 tcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37971572 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 37971523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 53974310 - 53974558
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  53974310 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattacccattcataaaatttgattttcaaaaagcctattccttcttt 53974409  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53974410 tttggttacaccccaaaacccttcttccaaaaccataattctccaatccatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 53974509  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  53974510 catgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttc 53974558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 4044905 - 4044657
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4044905 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 4044806  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4044805 tttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccatt 4044706  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  4044705 catgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttc 4044657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 4516111 - 4515863
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4516111 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 4516012  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  4516011 tttggttacaccccaaaacctttcttccaaaaccataattctccaatcgattcattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 4515912  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  4515911 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 4515863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 741 - 987
Target Start/End: Original strand, 41069837 - 41070083
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41069837 agtttttctacttgcaccctagttaatcatggttgcacct-aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctttt 41069935  T
Q  841 ttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 940  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41069936 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattc 41070035  T
Q  941 atgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  41070036 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 41070083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 10999843 - 10999595
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  10999843 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 10999744  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     ||||||||| || ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10999743 cttggttacatcccaaaacccctcttccaaaaccataattctgcaatagatcgattgtgttctgcgaagaatttcaaaaccatactttctcacgtccatt 10999644  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  10999643 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 10999595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 20048334 - 20048582
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  20048334 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 20048433  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20048434 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 20048533  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  20048534 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 20048582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 36430267 - 36430515
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  36430267 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattactctttgataaaatttgattttcaaaaagcctattccttcttt 36430366  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||| ||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36430367 ttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 36430466  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  36430467 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 36430515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 40586268 - 40586020
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  40586268 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 40586169  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40586168 tttggttacaccccaaaacctttcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccatt 40586069  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||| |||||||||||||||| ||||| |||||||| ||||||||    
T  40586068 catgattttaaagaaaattcgaagcaaatcaagttagcaagtgttgttc 40586020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 773 - 987
Target Start/End: Complemental strand, 6268422 - 6268207
Alignment:
Q  773 ttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttccataac 872  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| ||||||  ||||||| |||    
T  6268422 ttgcaccccaaaatgacaagattaccctttcctaaaatttgattttcaaaaagcctattccttctttttttattacaccccaaaaccgttcttccaaaac 6268323  T
Q  873 cataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagc-aatcagg 971  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6268322 cataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcagg 6268223  T
Q  972 ttagcaattgttgttc 987  Q
    ||||||| ||||||||    
T  6268222 ttagcaagtgttgttc 6268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 33966895 - 33967129
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  33966895 gagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttcttt 33966994  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33966995 tttggttacaccccaaaacc--------------ataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatccatt 33967080  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33967081 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 33967129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 177 - 519
Target Start/End: Original strand, 36029755 - 36030092
Alignment:
Q  177 taacaatttaatctctgcatacttttcttcaattccaacaagttccttattggcttcaaatgggcgtctctgattcagtttttccaaaacatctttgacg 276  Q
    |||||||| | ||||| ||||||||| |||||||||||| |||||||||||| ||||||||||  ||||  ||| |||||||| || |||||||||||||    
T  36029755 taacaattcagtctcttcatactttttttcaattccaactagttccttattgacttcaaatggctgtctgcgatccagttttttcagaacatctttgacg 36029854  T
Q  277 atgtccttaatgaagtctgattcaatcctaccatatgaatgg-aaagggggaaaataggtcaacattcatgttgtgctgataataattatataaataatt 375  Q
    ||||||||||||||||||| |||  ||||||||||| ||||| |||||   |||| |||||||||||| ||||||||| |||||||||         |||    
T  36029855 atgtccttaatgaagtctggttcgttcctaccatataaatggaaaaggaaaaaaaaaggtcaacattcttgttgtgctaataataatt---------att 36029945  T
Q  376 ttttaggggaagt---gcataaaatttgttgtcattatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtagg 472  Q
    |||||||| || |     ||||||||||||| ||   |||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  36029946 ttttagggaaattatattataaaatttgttgccaacgtgattgcggaagaaagaaggaaaaaatagatttcatggtatgaaaattcaaagatagagaagg 36030045  T
Q  473 tgattagtgttctattattttttctaggcaatgaatttccaaagcaa 519  Q
    | |||| |||||||||  ||||||||||||||||||||| |||||||    
T  36030046 taattaatgttctatttctttttctaggcaatgaatttcaaaagcaa 36030092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 740 - 983
Target Start/End: Complemental strand, 7156768 - 7156541
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||    
T  7156768 gagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgataagattaccctttcataaaatttgattttcaaagagtctattccttcttt 7156669  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    || |||||||||| ||||||||||||||| ||||||| |||||||| |||||||                 |||||||||||||||||||||||||| ||    
T  7156668 ttaggttacaccccaaaacccctcttccaaaaccatatttctccaaacgatcga-----------------tttcaaaaccatactttctcacgtccttt 7156586  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgtt 983  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  7156585 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 7156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 28 - 360
Target Start/End: Original strand, 36003558 - 36003888
Alignment:
Q  28 gttgattcttcccttacattttcgaggaaacaatgatattcgaattgagaacaatatttatcatataannnnnnngctagagaggtctttcctatgcccc 127  Q
    ||||||||||||||||||||||| ||||| |||||   ||| |||||||||||  ||||| |||||||       ||||||| |||||||||||| || |    
T  36003558 gttgattcttcccttacattttctaggaagcaatggcgttcaaattgagaacacaatttagcatataaatctttagctagagtggtctttcctataccgc 36003657  T
Q  128 ccatgccccataagccaagcgttctaacatcatttgacccattattcgttaacaatttaatctctgcatacttttcttcaattccaacaagttccttatt 227  Q
    |||| |||||||| ||||| | ||||||||||||||||  | | |||  |||  ||| | ||||| |||||||||  |||||||||||||||| | ||||    
T  36003658 ccattccccataatccaagtgatctaacatcatttgacaaaattttcagtaatgattcagtctcttcatactttttctcaattccaacaagttgcatatt 36003757  T
Q  228 ggcttcaaatgggcgtctctgattcagtttttccaaaacatctttgacgatgtccttaatgaagtctgattcaatcctaccatatgaatggaaaggggga 327  Q
      |||||||||||  |||| |||||| ||||| |||||||||||  || |||||||||||||| | ||||||||||||||||||||||||| |  |||||    
T  36003758 aacttcaaatgggtatctccgattcaattttttcaaaacatcttcaacaatgtccttaatgaaatttgattcaatcctaccatatgaatggga--gggga 36003855  T
Q  328 aaataggtcaacattcatgttgtgctgataata 360  Q
    ||  |||||||||||| |||| ||| |||||||    
T  36003856 aagaaggtcaacattcttgttttgcagataata 36003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 36885837 - 36885711
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||    
T  36885837 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaattttattttcaaaaagcatcttcctttttt 36885738  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  36885737 cttggttacaccctaaaatccctcttc 36885711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 7681100 - 7680974
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| |||||  ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  7681100 gagtttttctaattacaccctatttaattctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 7681001  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||||| ||||||    
T  7681000 cttggttacaccctaaaacctctcttc 7680974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 35039572 - 35039698
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  35039572 gagtttttctaattacaccctttttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 35039671  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  35039672 cttggttacaccctaaaatctctcttc 35039698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 13 - 312
Target Start/End: Original strand, 36024640 - 36024939
Alignment:
Q  13 ttgaatccacacctagttgattcttcccttacattttcgaggaaacaatgatattcgaattgagaacaatatttatcatataannnnnnngctagagagg 112  Q
    |||| |||||| || ||||||||||| |||||||||||||| ||||||||||  || ||||| |||||   |||   ||||||       || |||| ||    
T  36024640 ttgagtccacatctggttgattcttcgcttacattttcgagtaaacaatgatgatcaaattgggaacacagtttggaatataaatgtttcgcaagagtgg 36024739  T
Q  113 tctttcctatgccccccatgccccataagccaagcgttctaacatcatttgacccattattcgttaacaatttaatctctgcatacttttcttcaattcc 212  Q
    ||||||||||||| |||||||||||||| || ||   ||||||||||||||||||| | |||  |||| |||||| |||| |||||||||| ||||||||    
T  36024740 tctttcctatgccgcccatgccccataatcctaggcctctaacatcatttgacccaattttcagtaacgatttaacctcttcatacttttcctcaattcc 36024839  T
Q  213 aacaagttccttattggcttcaaatgggcgtctctgattcagtttttccaaaacatctttgacgatgtccttaatgaagtctgattcaatcctaccatat 312  Q
    || ||| | |  |||  ||||||||||| ||||| |||||| ||||| |||||| |||| || |||||  |||||||||   || ||| |||||||||||    
T  36024840 aaaaaggtgcccattaacttcaaatgggtgtctcagattcaattttttcaaaacgtcttcgatgatgtatttaatgaagatggagtcattcctaccatat 36024939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 735 - 866
Target Start/End: Complemental strand, 38145342 - 38145211
Alignment:
Q  735 aaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcct 834  Q
    |||| ||||||||||| || || |||  |||||  ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  38145342 aaaaagagtttttctaattacatcctgtttaattctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcct 38145243  T
Q  835 tcttttttggttacacccaaaaacccctcttc 866  Q
    | ||| |||||||||||| |||| ||||||||    
T  38145242 tttttcttggttacaccctaaaatccctcttc 38145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 36232768 - 36232642
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| || |||||| |||    
T  36232768 gagtttttctaattacaccatgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttcctttttt 36232669  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  36232668 cttggttacaccctaaaatccctcttc 36232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 738 - 866
Target Start/End: Original strand, 11123856 - 11123984
Alignment:
Q  738 acgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttct 837  Q
    ||||||||||||| || ||| ||| |||||| ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||  | || ||| |    
T  11123856 acgagtttttctaattacactctatttaatcctggttgcgccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatctttctttt 11123955  T
Q  838 tttttggttacacccaaaaacccctcttc 866  Q
    || |||||||||||| |||| ||||||||    
T  11123956 ttcttggttacaccctaaaatccctcttc 11123984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 84388 - 84460
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  84388 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 84460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 32236132 - 32236204
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32236132 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 32236204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 730 - 812
Target Start/End: Complemental strand, 20657493 - 20657412
Alignment:
Q  730 aaataaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  20657493 aaataaaaa-gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 20657412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 740 - 865
Target Start/End: Original strand, 33392511 - 33392635
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| |||||| |||||  |||||||||||||||||||||| ||||||||||||| |||||||||||| || |||||| |||    
T  33392511 gagtttttctaattacaccctatttaatcctggttataccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagtcttttcctt-ttt 33392609  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     | ||||||| || ||||| ||||||    
T  33392610 ctcggttacatcccaaaacacctctt 33392635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 740 - 857
Target Start/End: Complemental strand, 44354595 - 44354478
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||| | |||||| | |||    
T  44354595 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaaacatattccattttt 44354496  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  44354495 cttggttacaccctaaaa 44354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 7679794 - 7679722
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  7679794 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 7679722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 738 - 866
Target Start/End: Original strand, 11095645 - 11095773
Alignment:
Q  738 acgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttct 837  Q
    ||||||||||||| || ||||||| |||||| |||||||| |  |||||||||||| |||||||  |||| |||| ||||||||||||| | |||||| |    
T  11095645 acgagtttttctaattacaccctatttaatcctggttgcatcataaaatgacaaaaatacccttctataatatttaattttcaaaaagcatcttcctttt 11095744  T
Q  838 tttttggttacacccaaaaacccctcttc 866  Q
    || |||||||||||| |||| ||||||||    
T  11095745 ttcttggttacaccctaaaatccctcttc 11095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 26090201 - 26090273
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  26090201 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaattt 26090273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 741 - 812
Target Start/End: Original strand, 24395096 - 24395167
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    |||||||||| || || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24395096 agtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 24395167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 783 - 866
Target Start/End: Complemental strand, 47098357 - 47098274
Alignment:
Q  783 aaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||||||||||||||| |||||||||| |||||||||||| || |||||||||| |||||||||||| ||||||| |||||    
T  47098357 aaatgacaaaattacccttgcataaaatttcattttcaaaaagtctcttccttctttcttggttacaccccaaaacccttcttc 47098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 763 - 857
Target Start/End: Complemental strand, 49779928 - 49779834
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaa 857  Q
    |||||| |||||||| |||||||||||||||||| | ||||||||||||| ||||||||||||| | |||||| ||| |||||||||||| ||||    
T  49779928 ttaatcttggttgcatcccaaaatgacaaaattatcttttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 49779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 740 - 857
Target Start/End: Original strand, 30418690 - 30418807
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||||||| ||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||||| | |||||| |||    
T  30418690 gagtttttctaattacaccctgtttaatcatggctgcactccaaaatgacagaattatccttctataaaatttaattttcaaaaagcatcttcctttttt 30418789  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  30418790 cttggttacaccctaaaa 30418807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 740 - 857
Target Start/End: Complemental strand, 36841202 - 36841085
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||  |||||| |||||| ||| |||||||| |||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  36841202 gagtttttctaattacatcctttttaatcctggttgtacctcaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 36841103  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  36841102 cttggttacaccctaaaa 36841085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 672067 - 672139
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  672067 gagtttttctagttgcaccctagttaatcatggttgcactccaaaatgataagattaccctttcataaaattt 672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 14279129 - 14279232
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||||| ||||||||||||||||  || |||||||||| ||||||||||||| | ||| || ||| |||||||||||| |||| ||||    
T  14279129 ttaatcctggttgcaccctaaaatgacaaaattacttttccataaaatttaattttcaaaaagcatgttcattttttcttggttacaccctaaaatccct 14279228  T
Q  863 cttc 866  Q
    ||||    
T  14279229 cttc 14279232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 4596522 - 4596397
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||  |||||| | |||||| ||||||||||||||||||||||| ||||||| || ||||||||||||| | |||||| |||    
T  4596522 gagtttttctaattacatcctgtttaatcctagttgcatcccaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatcttcctttttt 4596424  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||  ||||||||    
T  4596423 cttggttacaccctaaagtccctcttc 4596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 391 - 519
Target Start/End: Original strand, 36003897 - 36004019
Alignment:
Q  391 ataaaatttgttgtcattatgattgagaaagaaagaaggaaaaaatagatttcatgaaatgaaaattcaaagatagagtaggtgattagtgttctattat 490  Q
    ||||||||| ||||||  ||||||||| |||||  ||||||||| ||||| | | |||||||||||||||||||||||||||| |||  |||||||        
T  36003897 ataaaatttattgtcaacatgattgagcaagaagaaaggaaaaa-tagatattaggaaatgaaaattcaaagatagagtaggtaattgatgttcta---- 36003991  T
Q  491 tttttctaggcaatgaatttccaaagcaa 519  Q
     ||||||||||||||||||| ||||||||    
T  36003992 -ttttctaggcaatgaatttacaaagcaa 36004019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 782 - 866
Target Start/End: Complemental strand, 39627176 - 39627093
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||||||  | ||||||||||||||||||||||| |||||||||||||    
T  39627176 aaaatgacaaaattatccttttataaaattt-atttttaaaaagtattttccttcttttttggttacaccccaaaacccctcttc 39627093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 48584857 - 48584960
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||| | || ||| ||| ||||||||| || |||| | ||    
T  48584857 ttaatcctggttgtactccaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatctttcttttttcttggttacatcctaaaatcact 48584956  T
Q  863 cttc 866  Q
    ||||    
T  48584957 cttc 48584960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 51662236 - 51662133
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||||| || ||||||| ||||||| |||| |||||||||| ||||||||||||| | |||||| ||| |||||||||||  |||| ||||    
T  51662236 ttaatcctggttgcatcctaaaatgataaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccataaaatccct 51662137  T
Q  863 cttc 866  Q
    ||||    
T  51662136 cttc 51662133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 769 - 860
Target Start/End: Original strand, 54556376 - 54556467
Alignment:
Q  769 atggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaaccc 860  Q
    |||||| || || ||||||| ||||||||||||||||||||||||||||| ||||||  | |||||||| | |||||||||||| |||||||    
T  54556376 atggttacatcctaaaatgataaaattaccctttcataaaatttgatttttaaaaagtttcttccttctctcttggttacaccccaaaaccc 54556467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 740 - 857
Target Start/End: Complemental strand, 2613423 - 2613306
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||| |||||| || ||||||  |||||| ||||||||   |||||||| ||||||| ||||||||||||||| ||||||||||| | | |||||| |||    
T  2613423 gagtatttctaattacaccctgtttaatcttggttgcatttcaaaatgataaaattatcctttcataaaatttaattttcaaaaaacatcttcctttttt 2613324  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  2613323 cttggttacaccctaaaa 2613306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 867
Target Start/End: Original strand, 1774066 - 1774162
Alignment:
Q  771 ggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttcc 867  Q
    |||| |||||||||| || ||||||||| || |||||||||| ||||| ||||||  | |||||||||| ||||||||| || ||||||||||||||    
T  1774066 ggttacaccccaaaacgataaaattacctttacataaaatttaatttttaaaaagtttcttccttctttcttggttacatcccaaaacccctcttcc 1774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 770 - 865
Target Start/End: Complemental strand, 8947927 - 8947833
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctctt 865  Q
    ||||| ||| || |||||||||||||| | ||||||| | ||||||||||||||||||| |||||||||  || ||||||||| ||||||||||||    
T  8947927 tggttacactccgaaatgacaaaattatc-tttcatatagtttgattttcaaaaagcctcttccttcttcctttgttacaccctaaaacccctctt 8947833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 781 - 866
Target Start/End: Original strand, 52812168 - 52812253
Alignment:
Q  781 caaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||||||||||||  ||| |||||||||| ||||||||||||| | |||||| ||| |||||||||| | |||| ||||||||    
T  52812168 caaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttccttttttcttggttacacactaaaatccctcttc 52812253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 52343124 - 52343208
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||||||||||  ||| |||||||||| ||||||||||||| | |||||| ||| |||||||||||| |||| || |||||    
T  52343124 aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccatcttc 52343208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 19941682 - 19941808
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||  |||||  ||||||||| | ||||||| |||||||  ||| |||||||||| ||||||||||||| | |||||| |||    
T  19941682 gagtttttctaattacacactgtttaattctggttgcactctaaaatgataaaattattcttccataaaatttaattttcaaaaagcatcttcctttttt 19941781  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     || ||||||||| |||| | ||||||    
T  19941782 ctttgttacaccctaaaatctctcttc 19941808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 782 - 866
Target Start/End: Original strand, 41588920 - 41589001
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||| ||| | |||||||||| |||||||||||||    
T  41588920 aaaatgataaaattactctttcataaaattt-atttt-aaaaagcctcttcctt-tttctcggttacaccccaaaacccctcttc 41589001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 735 - 779
Target Start/End: Complemental strand, 22786373 - 22786329
Alignment:
Q  735 aaaacgagtttttctattttcaccctagttaatcatggttgcacc 779  Q
    |||| ||||||||||| || |||||||||||||||||||||||||    
T  22786373 aaaaagagtttttctacttgcaccctagttaatcatggttgcacc 22786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 23387520 - 23387572
Alignment:
Q  248 gattcagtttttccaaaacatctttgacgatgtccttaatgaagtctgattca 300  Q
    ||||||| || | ||| ||||||||||| ||||||||||||||||||||||||    
T  23387520 gattcagcttctgcaagacatctttgacaatgtccttaatgaagtctgattca 23387572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 23353051 - 23353105
Alignment:
Q  111 ggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttgac 165  Q
    ||||||||||||||| |||||||||||||  |||||  ||| |||||||||||||    
T  23353051 ggtctttcctatgccacccatgccccatattccaaggattccaacatcatttgac 23353105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 23441020 - 23441078
Alignment:
Q  106 agagaggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttga 164  Q
    |||| ||||||||||||||| |||||||||||||  |||||   |||||||||||||||    
T  23441020 agagtggtctttcctatgccacccatgccccatattccaaggactctaacatcatttga 23441078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 23473552 - 23473610
Alignment:
Q  106 agagaggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttga 164  Q
    |||| ||||||||||||||| |||||||||||||  |||||   |||||||||||||||    
T  23473552 agagtggtctttcctatgccacccatgccccatattccaaggactctaacatcatttga 23473610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 763 - 865
Target Start/End: Complemental strand, 35233738 - 35233637
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||  | ||||||| ||||||| |||||||||||| || ||||| ||||| | | || ||| ||| |||||||||||| |||| ||||    
T  35233738 ttaatcctggttgcattctaaaatgataaaattatcctttcataaaa-ttaatttttaaaaaacatctttcttttttcttggttacaccctaaaatccct 35233640  T
Q  863 ctt 865  Q
    |||    
T  35233639 ctt 35233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 23405760 - 23405817
Alignment:
Q  111 ggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttgaccca 168  Q
    ||||||||||||||| |||||||||||||  ||||   || |||||||||||||||||    
T  23405760 ggtctttcctatgccacccatgccccatattccaatgattttaacatcatttgaccca 23405817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 168
Target Start/End: Original strand, 23464391 - 23464448
Alignment:
Q  111 ggtctttcctatgccccccatgccccataagccaagcgttctaacatcatttgaccca 168  Q
    ||||||||||||||| |||||||||||||  ||||   || |||||||||||||||||    
T  23464391 ggtctttcctatgccacccatgccccatattccaatgattataacatcatttgaccca 23464448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 742 - 987
Target Start/End: Original strand, 39365248 - 39365494
Alignment:
Q  742 gtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttt 841  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39365248 gtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttt 39365347  T
Q  842 tggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattca 941  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39365348 tggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattca 39365447  T
Q  942 tgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  39365448 tgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 39365494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 17122090 - 17122338
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17122090 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 17122189  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17122190 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 17122289  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  17122290 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 17122338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 743 - 987
Target Start/End: Original strand, 8376243 - 8376488
Alignment:
Q  743 tttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttttt 842  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8376243 tttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctttttt 8376342  T
Q  843 ggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 942  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8376343 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 8376442  T
Q  943 gatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  8376443 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 8376488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 23357340 - 23357092
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  23357340 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttcttt 23357241  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23357240 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 23357141  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  23357140 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 23357092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 734 - 987
Target Start/End: Complemental strand, 26122615 - 26122361
Alignment:
Q  734 aaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcc 833  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||    
T  26122615 aaaaaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcatattcc 26122516  T
Q  834 ttcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacg 933  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26122515 ttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccataatttctcacg 26122416  T
Q  934 tccattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26122415 tccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 26122361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 3032981 - 3032733
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  3032981 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataacatttgattttcaaaaagcctatttcttcttt 3032882  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3032881 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 3032782  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  3032781 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 3032733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 5988188 - 5988436
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  5988188 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 5988287  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     ||||||||| || ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5988288 cttggttacatcccaaaacccctcttccaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 5988387  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  5988388 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 5988436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 24822807 - 24822559
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24822807 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 24822708  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  24822707 tttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccataatttctcacgtccatt 24822608  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24822607 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 24822559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 35605337 - 35605585
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35605337 gagtttttctacttacaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 35605436  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  35605437 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgctctgcgaagattttcaaaaccatactttctcatgtccatt 35605536  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  35605537 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 35605585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 741 - 987
Target Start/End: Original strand, 34917539 - 34917786
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34917539 agtttttctacttgcaccctagttaatcatggatgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctttt 34917638  T
Q  841 ttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 940  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34917639 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 34917738  T
Q  941 atgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34917739 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 34917786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 26290862 - 26290614
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26290862 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttcttt 26290763  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26290762 tttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccatt 26290663  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  26290662 catgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttc 26290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 26304119 - 26303871
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26304119 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttcttt 26304020  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26304019 tttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccatt 26303920  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  26303919 catgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttc 26303871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 26337474 - 26337226
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  26337474 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttcttt 26337375  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26337374 tttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccatt 26337275  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  26337274 catgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttc 26337226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 43664408 - 43664161
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43664408 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 43664309  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43664308 tttggttacaccccaaaacccttcttccaaaaccataattctccaattgat-gattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43664210  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  43664209 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 43664161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 3137308 - 3137060
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  3137308 gagtttttctacttgcaccgtagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 3137209  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3137208 cttggttacaccccaaaacccctcttcgaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 3137109  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  3137108 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtcttgttc 3137060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 8656554 - 8656802
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  8656554 gagtttttctacttgcaccctagttaatcatggttgcaaccaaaaatgacaagattaacctttcataaaatttgattttcaaaaagtctattccttcttt 8656653  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8656654 tttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8656753  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8656754 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 8656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 34565112 - 34564864
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  34565112 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcctattccttcttt 34565013  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||| ||||||||| ||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34565012 ttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtattctgcgaagattttcaaaaccatactttctcacgtccatt 34564913  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34564912 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 34564864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 42512159 - 42512407
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42512159 gagtttttctacttgcatcctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 42512258  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42512259 tttggttacaccccaaaacccctcttccaaaattataattctccaatcgatcgattgtgttctccgaagattttcaaaaccatactttctcacgtccatt 42512358  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  42512359 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttc 42512407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 740 - 962
Target Start/End: Complemental strand, 22439689 - 22439467
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || ||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22439689 gagtttttctacttgcatcctagttaatcatggttacacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 22439590  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22439589 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 22439490  T
Q  940 catgatttcaaagaaaattcgaa 962  Q
    |||||||||||||||||||||||    
T  22439489 catgatttcaaagaaaattcgaa 22439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 739 - 852
Target Start/End: Complemental strand, 31793934 - 31793821
Alignment:
Q  739 cgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 838  Q
    |||||||||||| || ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||| ||    
T  31793934 cgagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttt 31793835  T
Q  839 ttttggttacaccc 852  Q
    | ||||||||||||    
T  31793834 tcttggttacaccc 31793821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 743 - 866
Target Start/End: Original strand, 12722559 - 12722682
Alignment:
Q  743 tttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttttt 842  Q
    |||||||| || ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||| || ||| ||    
T  12722559 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcattttttctt 12722658  T
Q  843 ggttacacccaaaaacccctcttc 866  Q
    |||||||||| |||| ||||||||    
T  12722659 ggttacaccctaaaatccctcttc 12722682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 822
Target Start/End: Complemental strand, 12713660 - 12713578
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaa 822  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  12713660 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacctttttataaaatttgattttcaaa 12713578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 41942445 - 41942319
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||| | || ||| |||    
T  41942445 gagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttactttttt 41942346  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  41942345 cttggttacaccctaaaatccctcttc 41942319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 740 - 857
Target Start/End: Complemental strand, 42688025 - 42687908
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| | |||||| |||    
T  42688025 gagtttttctaattacactctgtttaatcttggttgcaccccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttcctttttt 42687926  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  42687925 cttggttacaccctaaaa 42687908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 15839455 - 15839527
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15839455 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 15839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 28885795 - 28885723
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28885795 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 28885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 28909662 - 28909734
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28909662 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 28909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 36057816 - 36057690
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  36057816 gagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctttttt 36057717  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  36057716 cttggttacaccctaaaattcctcttc 36057690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 8014008 - 8013936
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8014008 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 8013936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 11587898 - 11587970
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11587898 gagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 11587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 17601334 - 17601406
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17601334 gagtttttctaattgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 17601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 37577983 - 37578055
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37577983 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 37578055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 770 - 862
Target Start/End: Complemental strand, 38168539 - 38168447
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||| |||||||| ||| |||||||||||| |||| ||||    
T  38168539 tggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatattccttttttcttggttacaccctaaaatccct 38168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 4005765 - 4005891
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||| | |  |||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  4005765 gagtttttctaattacaccctgtttaatcctggttgtatcttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 4005864  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     ||||||| |||| |||| ||||||||    
T  4005865 cttggttataccctaaaatccctcttc 4005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 38460185 - 38460060
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||||| |||||||||||||||||||||  |||||| || |||||| |||||| | |||||| |||    
T  38460185 gagtttttctaattacaccctgattaatcctggttgcacctcaaaatgacaaaattacccttctataaaa-ttaattttcgaaaagcatcttcctttttt 38460087  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    ||| ||||||||| |||| ||||||||    
T  38460086 ttttgttacaccctaaaatccctcttc 38460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 741 - 865
Target Start/End: Complemental strand, 5347560 - 5347437
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || || |||  |||||| ||||| ||||  ||||||| ||||||||||||||||||||||| | ||||||||||||| |||||| |||     
T  5347560 agtttttctaattacatcctgtttaatcctggttacaccttaaaatgataaaattaccctttcataaaatttaagtttcaaaaagcctcttcctt-ttta 5347462  T
Q  841 ttggttacacccaaaaacccctctt 865  Q
    | |||||||||| ||||||||||||    
T  5347461 tcggttacaccccaaaacccctctt 5347437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 5599944 - 5599872
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  5599944 gagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaattt 5599872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 5640676 - 5640748
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  5640676 gagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaattt 5640748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 776 - 866
Target Start/End: Complemental strand, 7970081 - 7969992
Alignment:
Q  776 caccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||| |||||| || |||||||||| |||||||||||  |||||||||||||    
T  7970081 caccctaaaatgacaaaattaccttttcataaaattt-atttttaaaaagtcttttccttctttcttggttacacctcaaaacccctcttc 7969992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 11266156 - 11266259
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||||||| |||||||| || ||||| |||  ||||||||| ||||||||||||| | |||||| ||| |||||||||||| |||| ||||    
T  11266156 ttaatcctggttgcacctcaaaatgataagattactcttctataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 11266255  T
Q  863 cttc 866  Q
    ||||    
T  11266256 cttc 11266259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 770 - 863
Target Start/End: Complemental strand, 16571303 - 16571211
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctc 863  Q
    ||||| || ||||||||||||||| |||||||||||||| ||| ||||| |||||||   |||||||||| |||||||||||| ||||||||||    
T  16571303 tggtttcaacccaaaatgacaaaactaccctttcataaagttt-atttttaaaaagctgtttccttctttcttggttacacccgaaaacccctc 16571211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 763 - 826
Target Start/End: Original strand, 38945711 - 38945774
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagc 826  Q
    |||||| ||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||    
T  38945711 ttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagc 38945774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 740 - 850
Target Start/End: Original strand, 38234417 - 38234527
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| |||||| || ||||||  |||||||||||||| | |||| |||||||||| ||||| ||||||| | || ||| |||    
T  38234417 gagtttttctaattacaccctatttaatcctgtttgcacttcaaaatgacaaaatgatccttccataaaatttaatttttaaaaagcatctttctttttt 38234516  T
Q  840 tttggttacac 850  Q
     ||||||||||    
T  38234517 cttggttacac 38234527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 741 - 866
Target Start/End: Original strand, 4229637 - 4229762
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || || |||  |||||| ||||||||   |||||||||| ||||| |||| |||||||||| ||||||||||| | | |||||| |||     
T  4229637 agtttttctaattacatcctgtttaatcctggttgcatttcaaaatgacagaattatccttccataaaatttaattttcaaaaaacatcttccttttttc 4229736  T
Q  841 ttggttacacccaaaaacccctcttc 866  Q
    |||||||||||| ||||  |||||||    
T  4229737 ttggttacaccctaaaattcctcttc 4229762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 740 - 826
Target Start/End: Complemental strand, 35329810 - 35329725
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagc 826  Q
    ||||||||||| || |||| |  |||||| ||||||||| ||||||||||||||||| |||| ||||||| || |||||||||||||    
T  35329810 gagtttttctaattacaccatgtttaatcctggttgcactccaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagc 35329725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 782 - 851
Target Start/End: Original strand, 5552 - 5621
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacc 851  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||  | |||||| ||| |||||||||||    
T  5552 aaaatgacaaaattatccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacacc 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 740 - 807
Target Start/End: Complemental strand, 28620483 - 28620416
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataa 807  Q
    ||||||||||| || ||||||| |||||| || |||||||||||||||||| ||||| |||| |||||    
T  28620483 gagtttttctaattacaccctatttaatcttgattgcaccccaaaatgacagaattatccttccataa 28620416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 838
Target Start/End: Original strand, 39712700 - 39712774
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 838  Q
    |||||| ||||| || || ||||||| ||||||| | ||||||||||||| ||||| ||||||||| |||||||||    
T  39712700 ttaatcctggttacatcctaaaatgataaaattatcttttcataaaatttaatttt-aaaaagcctcttccttctt 39712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 784 - 858
Target Start/End: Complemental strand, 2828354 - 2828281
Alignment:
Q  784 aatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaac 858  Q
    ||||||||||||||  |  |||| ||||| ||||||||||||||| || ||||||| |||||||||||| |||||    
T  2828354 aatgacaaaattactttggcatagaatttaattttcaaaaagcctctt-cttctttcttggttacaccccaaaac 2828281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 792 - 866
Target Start/End: Original strand, 44025624 - 44025698
Alignment:
Q  792 aattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||||| |||||||||  ||||||||||||| | |||||| ||| ||||||||| || |||  ||||||||    
T  44025624 aattacccttccataaaattaaattttcaaaaagcattttccttttttcttggttacatcctaaattccctcttc 44025698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 3875 - 4123
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3875 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 3974  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3975 tttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 4074  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  4075 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 13862 - 14110
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13862 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 13961  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13962 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 14061  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  14062 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 14110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 9065698 - 9065946
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9065698 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 9065797  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9065798 tttggttacaccccaaaacccttcttccaaaaccataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 9065897  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  9065898 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 9065946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 4156254 - 4156006
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4156254 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 4156155  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4156154 tttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 4156055  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  4156054 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 4156006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 31527663 - 31527415
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31527663 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 31527564  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31527563 tttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 31527464  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  31527463 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 31527415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 33280809 - 33281057
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33280809 gagtttttctacttgcaccctagttaatcatggttgtaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 33280908  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33280909 tttggttacaccccaaaacccttcttccaaaaccataattttccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 33281008  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33281009 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 33281057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 43293743 - 43293495
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  43293743 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcctattccttcttt 43293644  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43293643 tttggttacaccccaaaacccttcttccaaaaccataattctccaacagatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43293544  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  43293543 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 43293495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 43518377 - 43518129
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  43518377 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagagtaccctttcataaaatttgattttcaaaaagcatattccttcttt 43518278  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43518277 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43518178  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
     |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  43518177 aatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 43518129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 13145966 - 13145718
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  13145966 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaaccttttccttcttt 13145867  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    |||| |||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13145866 tttgattacaccccaaaacccttcttccaaaaccataattctcaaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccatt 13145767  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  13145766 catgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttc 13145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 24559068 - 24559316
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24559068 gagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttcttt 24559167  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  |||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24559168 tttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 24559267  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24559268 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 24559316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 24600100 - 24600348
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24600100 gagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttcttt 24600199  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  |||| || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24600200 tttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 24600299  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24600300 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 24600348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 19034806 - 19034558
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  19034806 gagtttttctacttgcaccttagttaatcatggttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcttattccttcttt 19034707  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    |||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19034706 tttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctatt 19034607  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
     |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  19034606 tatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 19034558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 37865875 - 37866123
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  37865875 gagtttttctacttgcactctaattaatcatgattgcaccccaaaatgacaaaattatcctttcataaaatttgattttcaaaaagcctatttcttcttt 37865974  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37865975 tttggttacaccccaaaaccattcttccaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctatt 37866074  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37866075 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 37866123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 40738892 - 40739018
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||    
T  40738892 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctttttt 40738991  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  40738992 cttggttacaccctaaaatccctcttc 40739018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 734 - 866
Target Start/End: Original strand, 18864424 - 18864556
Alignment:
Q  734 aaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcc 833  Q
    ||||| ||||||||||| || ||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| || ||||    
T  18864424 aaaaaagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttcc 18864523  T
Q  834 ttcttttttggttacacccaaaaacccctcttc 866  Q
    || ||| |||||||||||| |||| ||||||||    
T  18864524 ttttttcttggttacaccctaaaatccctcttc 18864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 10666222 - 10666096
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || ||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||  | |||||| |||    
T  10666222 gagtttttataattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatcttcctttttt 10666123  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  10666122 cttggttacaccctaaaatccctcttc 10666096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 862
Target Start/End: Original strand, 36294181 - 36294303
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||| |||||||||     
T  36294181 gagtttttctaattacaccatgtttaatcatggttacaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaggcctcttccttcttc 36294280  T
Q  840 tttggttacacccaaaaacccct 862  Q
     |||| ||||||| |||||||||    
T  36294281 cttggctacaccccaaaacccct 36294303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 740 - 852
Target Start/End: Complemental strand, 41882005 - 41881893
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||| |||    
T  41882005 gagtttttctaattacaccctgtttaattttggttgcaccccaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatattcctttttt 41881906  T
Q  840 tttggttacaccc 852  Q
     ||||||||||||    
T  41881905 cttggttacaccc 41881893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 740 - 869
Target Start/End: Complemental strand, 12189391 - 12189262
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| ||||| ||||||||||||| |||||||||||| |||||||||| ||||||||||| ||| | ||||||||    
T  12189391 gagtttttctaattacaccttgtttaatcctggttacaccccaaaatgataaaattacccttccataaaatttaattttcaaaaaacctctcccttcttt 12189292  T
Q  840 tttggttacacccaaaaacccctcttccat 869  Q
     |||||||||||| ||||| ||||| ||||    
T  12189291 cttggttacaccccaaaactcctctcccat 12189262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 25084856 - 25084928
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25084856 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 25084928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 25142829 - 25142901
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25142829 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 25142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 852
Target Start/End: Original strand, 31484649 - 31484761
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || |||  |||||  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  31484649 gagtttttctaattacagcctgtttaattctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 31484748  T
Q  840 tttggttacaccc 852  Q
     ||||||||||||    
T  31484749 cttggttacaccc 31484761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 7338643 - 7338745
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||| ||| ||| |||||||| |||| ||||    
T  7338643 ttaatcctggttgcaccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagcatcttcctt-tttcttgattacaccctaaaatccct 7338741  T
Q  863 cttc 866  Q
    ||||    
T  7338742 cttc 7338745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 37274677 - 37274574
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||| || ||| |||||||||||| |||| ||||    
T  37274677 ttaatcctgcttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatccct 37274578  T
Q  863 cttc 866  Q
    ||||    
T  37274577 cttc 37274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 740 - 811
Target Start/End: Complemental strand, 38760608 - 38760537
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatt 811  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38760608 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38760537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 741 - 866
Target Start/End: Original strand, 6245188 - 6245313
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || ||||||  |||||  ||||||||| | | |||||||||||||| |||||||||||||| |||||||||||| || |||||| |||     
T  6245188 agtttttctaattacaccctgtttaattctggttgcactctagaatgacaaaattacactttcataaaatttaattttcaaaaagactcttccttttttc 6245287  T
Q  841 ttggttacacccaaaaacccctcttc 866  Q
    |||||||||||| |||| ||||||||    
T  6245288 ttggttacaccctaaaatccctcttc 6245313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 6470019 - 6469947
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6470019 gagtttttctacttgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 6469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 4621169 - 4621272
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||| |||||||||||| || |||||| ||| ||||||||| || |||| | ||    
T  4621169 ttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttttttcttggttacatcctaaaatcact 4621268  T
Q  863 cttc 866  Q
    ||||    
T  4621269 cttc 4621272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 747 - 866
Target Start/End: Complemental strand, 13211067 - 13210948
Alignment:
Q  747 tctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggtt 846  Q
    ||||||| ||||||  |||||| ||||||||||  ||||||||||||||||  || |||||||||| ||||||||||||| | |||||| ||| ||||||    
T  13211067 tctatttacaccctgtttaatcctggttgcaccttaaaatgacaaaattactgttccataaaatttaattttcaaaaagcatcttccttttttcttggtt 13210968  T
Q  847 acacccaaaaacccctcttc 866  Q
    |||||| |||| ||||||||    
T  13210967 acaccctaaaatccctcttc 13210948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 8232543 - 8232669
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||  |||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | | |||||| |||    
T  8232543 gagtttttctaattacactctgcttaatcctggttgcaccccaaaatgataagattaccctttcataaaatttaattttcaaaaaacatcttcctttttt 8232642  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     || ||||||||| |||| || |||||    
T  8232643 cttagttacaccctaaaatccgtcttc 8232669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 42437460 - 42437334
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||  |||||| ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| || |||    
T  42437460 gagtttttctaattacactctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcatttttt 42437361  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  42437360 cttggttacaccctaaaattcctcttc 42437334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 741 - 866
Target Start/End: Complemental strand, 15272853 - 15272728
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || ||||||  |||||| |||||||||  ||||||| |||||||| |||| |||||||||| ||||||||||||| | || ||| |||     
T  15272853 agtttttctaattacaccctgtttaatcctggttgcacttcaaaatgtcaaaattatccttccataaaatttaattttcaaaaagcatctttcttttttc 15272754  T
Q  841 ttggttacacccaaaaacccctcttc 866  Q
    |||||||||||| |||| ||||||||    
T  15272753 ttggttacaccctaaaatccctcttc 15272728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 19617808 - 19617736
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  19617808 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattaccctttcataaaattt 19617736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 740 - 851
Target Start/End: Original strand, 37340800 - 37340911
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  || ||||| |||||||||||| ||||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  37340800 gagtttttctaattacaccctgtttaattctgattgcatcccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctttttt 37340899  T
Q  840 tttggttacacc 851  Q
    ||||||||||||    
T  37340900 tttggttacacc 37340911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 740 - 843
Target Start/End: Complemental strand, 43548668 - 43548565
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||| | |||| | |||    
T  43548668 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccgttttt 43548569  T
Q  840 tttg 843  Q
    ||||    
T  43548568 tttg 43548565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 31498837 - 31498963
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  | ||||||| | |||||||||||||||||||| |||||||||| ||||||||||||| | ||| || |||    
T  31498837 gagtttttctaattacaccctgtttaattcttgttgcactctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcgtttttt 31498936  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     ||| |||||||| |||| ||||||||    
T  31498937 cttgattacaccctaaaatccctcttc 31498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 29920290 - 29920362
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| |  ||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  29920290 gagtttttctactagcaccctagttaatcatggttgcacctcaaaataacaagattaccctttcataaaattt 29920362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 18522184 - 18522287
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||||| ||||| ||||||||| |||| |||||||||| ||||||||||| | | |||||| ||| ||||||| || |||||| ||||    
T  18522184 ttaatcctggttgcaccctaaaataacaaaattatccttccataaaatttaattttcaaaaaacatcttccttttttcttggttatactcaaaaatccct 18522283  T
Q  863 cttc 866  Q
    ||||    
T  18522284 cttc 18522287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 743 - 866
Target Start/End: Original strand, 18978453 - 18978576
Alignment:
Q  743 tttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttttt 842  Q
    |||||||| || ||||||  |||||| ||||||||||||||||||||| ||||| ||||  ||||||||| ||||||||||||  | ||| || ||| ||    
T  18978453 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttctataaaatttaattttcaaaaagtatcttctttttttctt 18978552  T
Q  843 ggttacacccaaaaacccctcttc 866  Q
    |||||||||| ||||  |||||||    
T  18978553 ggttacaccctaaaattcctcttc 18978576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 782 - 856
Target Start/End: Original strand, 37105892 - 37105965
Alignment:
Q  782 aaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaa 856  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | | |||||| |||||| |||||||||||||    
T  37105892 aaaatgacaaaattaccctttcataaaatttaattttcaaaaaacgtcttcctt-tttttttgttacacccaaaa 37105965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 866
Target Start/End: Original strand, 10552506 - 10552630
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || || |||  |||||| |||||||| |  |||||||||||||||  ||| |||||||||| ||||||||||||| | ||  || ||||    
T  10552506 agtttttctaattacatcctgattaatcctggttgcatcttaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatctt-tttttttt 10552604  T
Q  841 ttggttacacccaaaaacccctcttc 866  Q
    || ||||||||| |||| ||||||||    
T  10552605 tttgttacaccctaaaatccctcttc 10552630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 776 - 859
Target Start/End: Original strand, 27308709 - 27308791
Alignment:
Q  776 caccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacc 859  Q
    ||||| ||||||| ||||||| | ||||||||||||| ||||||| ||||||| || ||| ||| | |||||||||||||||||    
T  27308709 caccctaaaatgataaaattatcttttcataaaatttaattttcagaaagcctctttctt-tttctcggttacacccaaaaacc 27308791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 788 - 839
Target Start/End: Complemental strand, 35319810 - 35319759
Alignment:
Q  788 acaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||||  ||||||||||||||||||||||||||  || ||||||||||    
T  35319810 acaaaattattctttcataaaatttgattttcaaaaaatctcttccttcttt 35319759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 24317181 - 24317428
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24317181 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 24317280  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24317281 tttggttacaccccaaaacccttcttcca-aaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 24317379  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24317380 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 24317428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 33010870 - 33010622
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33010870 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 33010771  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33010770 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 33010671  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33010670 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 33010622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 39569539 - 39569291
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39569539 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 39569440  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39569439 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatcgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39569340  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  39569339 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 39569291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 42948189 - 42948437
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42948189 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 42948288  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42948289 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 42948388  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42948389 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 42948437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 52044473 - 52044225
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  52044473 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 52044374  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52044373 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 52044274  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  52044273 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 52044225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 34270857 - 34270609
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  34270857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 34270758  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34270757 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccatt 34270658  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34270657 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 34270609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 44721871 - 44722119
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  44721871 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 44721970  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44721971 tttggttacaccccaaaacccttcttccaaaaccataattctctaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 44722070  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  44722071 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 44722119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 52024725 - 52024973
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  52024725 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaggattaccctttcataaaatttgattttcaaaaagcctattccttcttt 52024824  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  52024825 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcatgtccatt 52024924  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  52024925 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 52024973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 740 - 986
Target Start/End: Original strand, 15932786 - 15933033
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  15932786 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 15932885  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15932886 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccatt 15932985  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgtt 986  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  15932986 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 15933033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 6653224 - 6653472
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6653224 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgactttcaaaaagcctattccttcttt 6653323  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6653324 tttggttacaccccaaaactcttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 6653423  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6653424 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 6653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 40400033 - 40400281
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  40400033 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 40400132  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40400133 cttggttacatcccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40400232  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    || |||||||||||||||||||||| |||||||||||||| ||||||||    
T  40400233 caggatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 40400281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 745 - 987
Target Start/End: Original strand, 20581504 - 20581746
Alignment:
Q  745 tttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttgg 844  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20581504 tttctacttgcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttgg 20581603  T
Q  845 ttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatga 944  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20581604 ttacacccaaaa-cccctcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccattcatga 20581702  T
Q  945 tttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||| ||| | |||||||| ||||||||    
T  20581703 tttcaaagaaaattcgaagcaaattatgttagcaagtgttgttc 20581746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 18909215 - 18909463
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  18909215 gagtttttctacttacaccctagttaatcatggttgcattccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattctttcttt 18909314  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18909315 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccatt 18909414  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  18909415 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 18909463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 50727797 - 50728045
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  50727797 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctttttt 50727896  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||| ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50727897 ttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 50727996  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  50727997 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 50728045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 26151249 - 26151001
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  26151249 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcatattccttcttt 26151150  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26151149 tttggttacaccctaaaactcttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 26151050  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26151049 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 26151001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 740 - 983
Target Start/End: Original strand, 49823204 - 49823448
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  49823204 gagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattacccttttataaaatttgattttcaaaaagcctattccttcttt 49823303  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49823304 tttggttacaccccaaaacccttcttccgaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccatt 49823403  T
Q  940 catgatttcaaagaaaattcgaag-caatcaggttagcaattgtt 983  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||    
T  49823404 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgtt 49823448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 2482716 - 2482465
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2482716 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttcttt 2482617  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcac----gtc 935  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    |||    
T  2482616 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccgtc 2482517  T
Q  936 cattcatgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  2482516 cattcatgatttcaaag-aaattcgaagcaaatcaggttagcaagtgttgttc 2482465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 13942143 - 13942391
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  13942143 gagtttttctacttgcaccctatttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 13942242  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  13942243 tttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgtttttcgaagattttcaaaaccatactttctcacgtccatt 13942342  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||||||    
T  13942343 catgatttcaaagaaaatttaaagcaaatcaggttagcaagtgttgttc 13942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 2138329 - 2138081
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||| ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  2138329 gagtttttctacttgcactctagttaatcatggttgcacctcaaaatgataagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 2138230  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2138229 tttggttacaccccaaaacccttcttccaaaactataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 2138130  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  2138129 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttc 2138081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 740 - 952
Target Start/End: Complemental strand, 28853003 - 28852791
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || || ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28853003 gagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 28852904  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28852903 tttggttacaccccaaaacccttcttccaaaactataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 28852804  T
Q  940 catgatttcaaag 952  Q
    |||||||||||||    
T  28852803 catgatttcaaag 28852791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 51677332 - 51677084
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||| ||||||  | |||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  51677332 gagtttttctacttgcaccctagttaatcatagttgcattctaaaatgacaagattatcctttcataaaatttgatttacaaaaagcctattccttcttt 51677233  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51677232 tttggttacaccccaaaactcttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 51677133  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  51677132 catgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttc 51677084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 740 - 836
Target Start/End: Complemental strand, 13240303 - 13240207
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttc 836  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  13240303 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaagagtctattccttc 13240207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 29922309 - 29922183
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||    
T  29922309 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctttttt 29922210  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  29922209 cttggttacaccctaaaatccctcttc 29922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 40498617 - 40498743
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||    
T  40498617 gagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcatcttcctttttt 40498716  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  40498717 cttggttacaccctaaaattcctcttc 40498743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 51776029 - 51776155
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||| | |||||| |||    
T  51776029 gagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttcctttttt 51776128  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| ||||||||    
T  51776129 cttggttacaccctaaaatccctcttc 51776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 734 - 866
Target Start/End: Original strand, 17605721 - 17605853
Alignment:
Q  734 aaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcc 833  Q
    ||||| ||||||||||| || ||||||   ||||| ||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||| | ||||    
T  17605721 aaaaaagagtttttctaattacaccctgtgtaatcctggttgcaccctaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatcttcc 17605820  T
Q  834 ttcttttttggttacacccaaaaacccctcttc 866  Q
    || ||| |||||||||||| |||| ||||||||    
T  17605821 ttttttcttggttacaccctaaaatccctcttc 17605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 11173584 - 11173512
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11173584 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 11173512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 14247529 - 14247457
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14247529 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 14247457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 39982263 - 39982335
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39982263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 39982335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 740 - 812
Target Start/End: Original strand, 51290549 - 51290621
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51290549 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 51290621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 743 - 866
Target Start/End: Original strand, 41712763 - 41712886
Alignment:
Q  743 tttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttttt 842  Q
    |||||||| || ||||||  |||||| ||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||| | |||||| ||| ||    
T  41712763 tttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttttctt 41712862  T
Q  843 ggttacacccaaaaacccctcttc 866  Q
    |||||||||| ||||  |||||||    
T  41712863 ggttacaccctaaaattcctcttc 41712886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 26307846 - 26307972
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||  ||||||||||||||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  26307846 gagtttttctaattacaccctgtttaatcttggttgcaccttaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctttttt 26307945  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| || |||||    
T  26307946 cttggttacaccctaaaatccatcttc 26307972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 51002116 - 51001990
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| ||  |||||  |||||| || |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| | |||||| |||    
T  51002116 gagtttttctaattataccctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttcctttttt 51002017  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  51002016 cttggttacaccctaaaattcctcttc 51001990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 744 - 857
Target Start/End: Complemental strand, 23444424 - 23444312
Alignment:
Q  744 ttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttg 843  Q
    ||||||| || ||||||| |||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||| |||||| | |||||| ||| |||    
T  23444424 ttttctaattacaccctatttaatcttggttgcaccccacaatgacaaaattatcctttcataaaatttaattttc-aaaagcatcttccttttttcttg 23444326  T
Q  844 gttacacccaaaaa 857  Q
    ||||||||| ||||    
T  23444325 gttacaccctaaaa 23444312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 40536872 - 40536800
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  40536872 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaattt 40536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 7009008 - 7009131
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| |  ||||||  |||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||  |    
T  7009008 gagtttttctaatcacaccctgtttaatcctggttacaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc--t 7009104  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    ||| | ||||||| |||||||||||||    
T  7009105 tttcggtacaccccaaaacccctcttc 7009131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 14290355 - 14290252
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||||  |||||||||||||||||||| |||||||||| ||||||||||||| | || ||| ||| |||||||||||| |||| ||||    
T  14290355 ttaatcctggttgcaccttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatctttcttttttcttggttacaccctaaaatccct 14290256  T
Q  863 cttc 866  Q
    ||||    
T  14290255 cttc 14290252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 9640976 - 9640850
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  | |||| |||||||| || ||||||||||||||||||||| ||||||||| ||||||||||||| | ||| || |||    
T  9640976 gagtttttctaattacacccttttcaatcctggttgcatcctaaaatgacaaaattacccttttataaaatttaattttcaaaaagcatcttcttttttt 9640877  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||| | ||||||    
T  9640876 cttggttacaccctaaaatctctcttc 9640850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 32086482 - 32086608
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| || |||||||||||||||||| ||||| |||| |||||||||| |||||||||| || | |||||| |||    
T  32086482 gagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaggcatcttcctttttt 32086581  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  32086582 cttggttacaccctaaaattcctcttc 32086608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 740 - 857
Target Start/End: Original strand, 13146022 - 13146138
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||||| |||||||||||||||| ||| ||||||| || ||||||||||||| | |||||| |||    
T  13146022 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattactcttccataaaa-ttaattttcaaaaagcatcttcctttttt 13146120  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  13146121 cttggttacaccctaaaa 13146138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 741 - 857
Target Start/End: Original strand, 17474665 - 17474781
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || || |||  |||||| |||||||| || ||||||||||||||| ||||||||||||||| ||||||||||||  | |||||| |||     
T  17474665 agtttttctaattacatcctctttaatcctggttgcatcctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagaatcttccttttttc 17474764  T
Q  841 ttggttacacccaaaaa 857  Q
    |||||||||||| ||||    
T  17474765 ttggttacaccctaaaa 17474781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 764 - 850
Target Start/End: Original strand, 5672915 - 5673001
Alignment:
Q  764 taatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacac 850  Q
    ||||| |||||||| || |||||||||||||||||||| |||||||||| ||||||||||||| | |||||| ||| ||||||||||    
T  5672915 taatcctggttgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 5673001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 12601854 - 12601979
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  |||||||| || |||||||||||||||  ||| |||||||||| ||||||||||||| | |||||| |||    
T  12601854 gagtttttctaattacaccctgtttaattctggttgcatcc-aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttcctttttt 12601952  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    ||||||||||||| |||| | ||||||    
T  12601953 tttggttacaccctaaaatcgctcttc 12601979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 8114966 - 8114863
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| ||||||||||| ||||||||||||||| |||| || ||||||| ||||||||||||| | ||| || ||| |||||||||||| |||| | ||    
T  8114966 ttaatcctggttgcaccctaaaatgacaaaattatccttccagaaaatttaattttcaaaaagcatcttctttttttcttggttacaccctaaaatctct 8114867  T
Q  863 cttc 866  Q
    ||||    
T  8114866 cttc 8114863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 763 - 866
Target Start/End: Complemental strand, 19247839 - 19247736
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||||| || ||||||| |||||||||||| |||||||||| ||||||||||||| | |||||| ||| ||| |||||||| ||||  |||    
T  19247839 ttaatcctggttgcatcctaaaatgataaaattacccttccataaaattttattttcaaaaagcatcttccttttttcttgattacaccctaaaattcct 19247740  T
Q  863 cttc 866  Q
    ||||    
T  19247739 cttc 19247736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 741 - 851
Target Start/End: Complemental strand, 19514220 - 19514110
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || ||||||  |||||| |||||||| |  ||||| |||||||||| ||| |||||||||| ||||||||||||| | |||||| |||     
T  19514220 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttccttttttc 19514121  T
Q  841 ttggttacacc 851  Q
    |||||||||||    
T  19514120 ttggttacacc 19514110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 763 - 866
Target Start/End: Original strand, 35273849 - 35273952
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||| |||||||| || ||||||||| ||||| |||| |||||||||| ||||||||||||| | |||||| ||| ||||||||| || ||||  |||    
T  35273849 ttaatcctggttgcatcctaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacatcctaaaattcct 35273948  T
Q  863 cttc 866  Q
    ||||    
T  35273949 cttc 35273952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 740 - 811
Target Start/End: Original strand, 48933215 - 48933286
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatt 811  Q
    ||||||||||| || ||||||  ||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  48933215 gagtttttctaattacaccctgattaatcatggttgcacctcaaaatgataaaattacccttccataaaatt 48933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 32561264 - 32561389
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||| |  |||||| ||||||||||  ||||||||||||||||||||  |||||| || |||||| |||| | | |||||| |||    
T  32561264 gagtttttctaattacaccatgattaatcctggttgcacctaaaaatgacaaaattacccttctataaaa-ttaattttcgaaaaacatcttcctttttt 32561362  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    ||| ||||||||| |||| ||||||||    
T  32561363 ttttgttacaccctaaaatccctcttc 32561389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 24527720 - 24527597
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| |  ||||||  |||||| || |||||  |||||||| |||||||||| ||||||||||||| ||||| ||||||| | |||||||  |    
T  24527720 gagtttttctaatcacaccctgtttaatcctgattgcattccaaaatgccaaaattaccatttcataaaatttaatttt-aaaaagcatcttccttc--t 24527624  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
    | | ||||||||| |||||||||||||    
T  24527623 tctcgttacaccccaaaacccctcttc 24527597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 740 - 858
Target Start/End: Original strand, 3485815 - 3485933
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaa-tttgattttcaaaaagcctattccttctt 838  Q
    |||||||| || || ||||||  |||||| ||||| |||  |||||| ||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||    
T  3485815 gagtttttttaattacaccctgtttaatcttggttacacttcaaaataacaaaattatccttttataaaaatttaattttcaaaaagcctcttcctt-tt 3485913  T
Q  839 ttttggttacacccaaaaac 858  Q
    | | |||||||||| |||||    
T  3485914 tctcggttacaccccaaaac 3485933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 763 - 862
Target Start/End: Original strand, 35841475 - 35841574
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccct 862  Q
    |||||||| ||| || | |||||| ||||||||| |||| |||||||||| |||||||||||| || || ||||||  || |||||| || |||||||||    
T  35841475 ttaatcatagttacatctcaaaataacaaaattatccttccataaaatttaattttcaaaaagtctctttcttcttactttgttacaacccaaaacccct 35841574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 938 - 978
Target Start/End: Complemental strand, 13240209 - 13240168
Alignment:
Q  938 ttcatgatttcaaagaaaattcgaagc-aatcaggttagcaa 978  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  13240209 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaa 13240168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 740 - 857
Target Start/End: Complemental strand, 46291907 - 46291790
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||  || |||||| |||||||| |  ||||||||||||||||   | |||||||||| ||||| ||||||| | |||| | |||    
T  46291907 gagtttttctaattacacattatttaatcctggttgcatcttaaaatgacaaaattacttatccataaaatttaatttttaaaaagcatcttccattttt 46291808  T
Q  840 tttggttacacccaaaaa 857  Q
     |||||||||||| ||||    
T  46291807 cttggttacaccctaaaa 46291790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 6016698 - 6016572
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| ||||||||    ||||||||||||||| | ||  ||||||||| ||||| ||||| | | ||| || |||    
T  6016698 gagtttttctaattacaccctgtttaatcctggttgcattttaaaatgacaaaattatcattctataaaatttaatttttaaaaaacatcttcttttttt 6016599  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| ||||  |||||||    
T  6016598 cttggttacaccctaaaattcctcttc 6016572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 12520 - 12768
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12520 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 12619  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12620 tttggttacaccccaaaacccttcttccaaaaccataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccatt 12719  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12720 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 12768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 14133 - 13885
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  14133 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaattataagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 14034  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| | ||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14033 tttggttacaccccaaaaccctttttccaaaacgataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccatt 13934  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  13933 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 13885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 201; Significance: 1e-109; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 29630580 - 29630332
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    |||||||| || || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  29630580 gagtttttttacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 29630481  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29630480 cttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 29630381  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  29630380 catgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttc 29630332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 6168020 - 6167772
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  6168020 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttcttt 6167921  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6167920 tttggttacaccccaaaacccttcttccaaatccataattctccaatcgatcgattgtgttctgcgaagattttcaaacccatactttctcacgtccatt 6167821  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6167820 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 6167772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 6625358 - 6625606
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  6625358 gagtttttctacttacaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 6625457  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6625458 tttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 6625557  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6625558 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 6625606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 7141263 - 7141511
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7141263 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 7141362  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7141363 tttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 7141462  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7141463 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 7141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 755 - 987
Target Start/End: Complemental strand, 29122423 - 29122190
Alignment:
Q  755 caccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaa 854  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  29122423 caccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacctca 29122324  T
Q  855 aaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaa 954  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29122323 aaacccttcttccaaaaccataattcttcaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaa 29122224  T
Q  955 aattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||| |||||||||||||| ||||||||    
T  29122223 aattcgaagcaaatcaggttagcaagtgttgttc 29122190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 3094588 - 3094836
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  3094588 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 3094687  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
     |||||||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3094688 cttggttacaccccaaaacctctcttccaaaaccataattctccaatcgatcgattatgttctgcgaagattttcaaaaccatactttctcacgtccatt 3094787  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    |||||||||||| |||||||||||| ||||| |||||||| ||||||||    
T  3094788 catgatttcaaataaaattcgaagcaaatcatgttagcaagtgttgttc 3094836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Original strand, 18893675 - 18893923
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18893675 gagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttcttt 18893774  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18893775 tttggttacaccccaaaacccttcttccagaaccataattctccaaccgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 18893874  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  18893875 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttc 18893923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 739 - 959
Target Start/End: Complemental strand, 25335223 - 25335003
Alignment:
Q  739 cgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctt 838  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  25335223 cgagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcttattccttctt 25335124  T
Q  839 ttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 938  Q
    |||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25335123 tttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 25335024  T
Q  939 tcatgatttcaaagaaaattc 959  Q
    |||||||||||||||||||||    
T  25335023 tcatgatttcaaagaaaattc 25335003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 734 - 934
Target Start/End: Complemental strand, 13890048 - 13889848
Alignment:
Q  734 aaaaacgagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattcc 833  Q
    ||||| ||||||||||| || ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  13890048 aaaaaagagtttttctacttgcaccctaattaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattcc 13889949  T
Q  834 ttcttttttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacg 933  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13889948 ttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacg 13889849  T
Q  934 t 934  Q
    |    
T  13889848 t 13889848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 6925777 - 6925903
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||| |||    
T  6925777 gagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 6925876  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     ||||||||| || |||| ||||||||    
T  6925877 cttggttacatcctaaaatccctcttc 6925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 770 - 866
Target Start/End: Original strand, 7081002 - 7081098
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||| ||||||||||||| ||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||    
T  7081002 tggttacaccccaaaatgataaaattatccttagataaaatttgattttcaaaaagcctcttccttcttttttggttacactccaaaatccctcttc 7081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 18024379 - 18024505
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||  ||||| ||  | |||||||||||||| |||||||||||||| | ||||| ||||||| | ||||||||||    
T  18024379 gagtttttctaattacaccctgtttaattctggttacattctaaaatgacaaaattgccctttcataaaatctaattttgaaaaagcttcttccttcttt 18024478  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     |||||||||||| |||||||||||||    
T  18024479 cttggttacacccgaaaacccctcttc 18024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 740 - 866
Target Start/End: Original strand, 23350354 - 23350480
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||||||||||||||  |||||| |||| |||||||||| ||||||||||||| | |||||| |||    
T  23350354 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgatcaaattatccttccataaaatttaattttcaaaaagcatcttcctttttt 23350453  T
Q  840 tttggttacacccaaaaacccctcttc 866  Q
     ||| |||||||| || | ||||||||    
T  23350454 cttgtttacaccctaagatccctcttc 23350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 764 - 866
Target Start/End: Complemental strand, 34085904 - 34085802
Alignment:
Q  764 taatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctc 863  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| | |||||| ||| ||||||| |||| ||||  ||||    
T  34085904 taatcctggttgcaccccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttataccctaaaattcctc 34085805  T
Q  864 ttc 866  Q
    |||    
T  34085804 ttc 34085802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 740 - 865
Target Start/End: Complemental strand, 11369164 - 11369039
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||  |||||| |||||||||| ||||||||||||||||| |||  ||||||||| ||||||||||||  | |||||| |||    
T  11369164 gagtttttctaattacaccctgtttaatcttggttgcacctcaaaatgacaaaattactcttctataaaatttaattttcaaaaagaatcttcctttttt 11369065  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     |||||||||||  |||| |||||||    
T  11369064 cttggttacaccataaaatccctctt 11369039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 770 - 866
Target Start/End: Original strand, 5714907 - 5715003
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| | ||| || | |||||||||||||| |||| ||||||||    
T  5714907 tggttgcacttcaaaataacaaaattaccctttcataaaatttaattttcaaaaagcatcttcattttcttttggttacaccctaaaatccctcttc 5715003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 741 - 865
Target Start/End: Complemental strand, 32173794 - 32173670
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttca-aaaagcctattccttcttt 839  Q
    |||||||||| || ||||||  |||||  ||||| || |||||||||||||||||||| ||| ||||||||| ||||||| |||||||| |||||| |||    
T  32173794 agtttttctaattacaccctgtttaattctggttacatcccaaaatgacaaaattaccattttataaaatttaattttcaaaaaagcctcttcctt-ttt 32173696  T
Q  840 tttggttacacccaaaaacccctctt 865  Q
     | |||||||||| ||||||||||||    
T  32173695 ctcggttacaccccaaaacccctctt 32173670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 770 - 866
Target Start/End: Complemental strand, 8811357 - 8811261
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||| ||||||||||||| ||||||| |||| |||||||||||||||| ||||||| | |||||| ||| |||||||||| | ||||||| |||||    
T  8811357 tggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 8811261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 740 - 819
Target Start/End: Complemental strand, 31091229 - 31091150
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttc 819  Q
    ||||||||||| || |||| |  |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  31091229 gagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc 31091150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 740 - 826
Target Start/End: Original strand, 8525525 - 8525611
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagc 826  Q
    ||||||||||| || ||| ||  |||||  |||||||| |||||||||| |||||||||||| |||||||||| |||||||||||||    
T  8525525 gagtttttctaattacacactgtttaattctggttgcatcccaaaatgataaaattacccttccataaaatttaattttcaaaaagc 8525611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 763 - 826
Target Start/End: Complemental strand, 29623233 - 29623170
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagc 826  Q
    |||||| ||||||||||  ||||||||||||||| | || |||||||||| |||||||||||||    
T  29623233 ttaatcctggttgcaccttaaaatgacaaaattatctttccataaaatttaattttcaaaaagc 29623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 763 - 824
Target Start/End: Complemental strand, 13445463 - 13445402
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaa 824  Q
    |||||| |||||||| || |||||||||||||||| |||  ||||||||| |||||||||||    
T  13445463 ttaatcctggttgcatcctaaaatgacaaaattactcttctataaaatttaattttcaaaaa 13445402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 2199 - 1951
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  2199 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttcttt 2100  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2099 tttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccatt 2000  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  1999 catgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttc 1951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 193; Significance: 1e-104; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 740 - 987
Target Start/End: Complemental strand, 157199 - 156951
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  157199 gagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 157100  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  157099 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 157000  T
Q  940 catgatttcaaagaaaattcgaagc-aatcaggttagcaattgttgttc 987  Q
    ||||||||  ||||||||||||||| |||||||||||||| ||||||||    
T  156999 catgattttcaagaaaattcgaagcaaatcaggttagcaagtgttgttc 156951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 763 - 851
Target Start/End: Original strand, 200056 - 200144
Alignment:
Q  763 ttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacc 851  Q
    |||||| ||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||| | | |||||| ||| |||| ||||||    
T  200056 ttaatcctggatgcatcccaaaatgacaaaattacccttccataaaatttaattttcaaaaaacatcttccttttttcttggctacacc 200144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 160; Significance: 9e-85; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 740 - 939
Target Start/End: Complemental strand, 3108 - 2909
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttt 839  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  3108 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagcatattcctccttt 3009  T
Q  840 tttggttacacccaaaaacccctcttccataaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 939  Q
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3008 catggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 2909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 812
Target Start/End: Complemental strand, 38496 - 38424
Alignment:
Q  740 gagtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaattt 812  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  38496 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 38424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 770 - 866
Target Start/End: Complemental strand, 3804 - 3708
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    ||||| ||||||||||||| ||||||| |||| |||||||||||||||| ||||||| | |||||| ||| |||||||||| | ||||||| |||||    
T  3804 tggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 3708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 770 - 866
Target Start/End: Complemental strand, 365905 - 365809
Alignment:
Q  770 tggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacccaaaaacccctcttc 866  Q
    |||||||||| ||| |||||||||| ||| || |||||||||| ||||||||||||| | |||||| ||| |||||||||||| |||| ||||||||    
T  365905 tggttgcacctcaacatgacaaaatgacctttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 741 - 851
Target Start/End: Original strand, 8719 - 8829
Alignment:
Q  741 agtttttctattttcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttctttt 840  Q
    |||||||||| || ||||||  |||||| |||||||| |  ||||| |||||||||| ||| |||||||||| ||||||||||||| | |||||| |||     
T  8719 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttccttttttc 8818  T
Q  841 ttggttacacc 851  Q
    |||||||||||    
T  8819 ttggttacacc 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 783 - 856
Target Start/End: Original strand, 13535 - 13609
Alignment:
Q  783 aaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggtta-cacccaaaa 856  Q
    |||||| ||||||| |||| |||||||| |  |||||||||||||| ||| |||||| ||||||| |||||||||    
T  13535 aaatgagaaaattatccttccataaaatatagttttcaaaaagcctcttcattctttcttggttaccacccaaaa 13609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University