View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1578-Insertion-5 (Length: 224)
Name: NF1578-Insertion-5
Description: NF1578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1578-Insertion-5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 38051959 - 38051817
Alignment:
| Q |
82 |
cccttgagcttctgtagtaggattcggtccttccacatgcgcttcttcagctcgtcataatcgatttcttcttctttttgttgatcaaaggactcgattt |
181 |
Q |
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| T |
38051959 |
cccttgagcttctgtagtaggattcggtccttccacatgcgcttcttcagctcgtcataatcgatttcttcttctttttgttgatcaaaggactcgattt |
38051860 |
T |
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| Q |
182 |
cttcggttatctctaccatgataaatttctgtgaattcttctt |
224 |
Q |
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| T |
38051859 |
cttcggttatctctaccatgataaatttctgtgaattcttctt |
38051817 |
T |
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