View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15783_low_2 (Length: 416)

Name: NF15783_low_2
Description: NF15783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15783_low_2
NF15783_low_2
[»] chr2 (23 HSPs)
chr2 (81-399)||(3955679-3955993)
chr2 (63-141)||(8234788-8234866)
chr2 (90-144)||(2304308-2304362)
chr2 (63-132)||(2114431-2114500)
chr2 (63-143)||(11133095-11133175)
chr2 (53-141)||(36426842-36426930)
chr2 (63-141)||(9796918-9796996)
chr2 (63-141)||(18386808-18386886)
chr2 (91-152)||(21970463-21970524)
chr2 (80-141)||(36520793-36520854)
chr2 (63-132)||(44721700-44721769)
chr2 (63-142)||(3037618-3037697)
chr2 (63-130)||(11837021-11837088)
chr2 (90-141)||(35502096-35502147)
chr2 (63-141)||(580779-580857)
chr2 (18-48)||(3956054-3956084)
chr2 (63-141)||(17154670-17154748)
chr2 (63-141)||(19905651-19905729)
chr2 (63-141)||(20122471-20122549)
chr2 (59-141)||(23683717-23683799)
chr2 (78-132)||(25406661-25406715)
chr2 (63-132)||(7086283-7086352)
chr2 (76-141)||(10262760-10262825)
[»] chr8 (17 HSPs)
chr8 (63-141)||(43468701-43468779)
chr8 (76-133)||(23239153-23239210)
chr8 (63-141)||(15042361-15042439)
chr8 (63-132)||(34073235-34073304)
chr8 (92-144)||(35301188-35301240)
chr8 (63-125)||(11822999-11823061)
chr8 (66-132)||(17987448-17987514)
chr8 (63-137)||(36359714-36359788)
chr8 (63-141)||(37219526-37219604)
chr8 (63-141)||(42688077-42688155)
chr8 (77-127)||(43508458-43508508)
chr8 (63-141)||(44070364-44070442)
chr8 (63-132)||(4798537-4798606)
chr8 (63-132)||(27558867-27558935)
chr8 (63-132)||(41125429-41125498)
chr8 (56-132)||(14683907-14683982)
chr8 (97-141)||(41089180-41089224)
[»] chr1 (19 HSPs)
chr1 (63-141)||(15774308-15774386)
chr1 (63-141)||(11405477-11405555)
chr1 (63-144)||(9527444-9527525)
chr1 (63-144)||(47939195-47939275)
chr1 (63-143)||(39994844-39994924)
chr1 (81-144)||(25819203-25819266)
chr1 (81-144)||(29491488-29491551)
chr1 (63-141)||(3532970-3533047)
chr1 (63-141)||(4354101-4354179)
chr1 (81-170)||(17350052-17350142)
chr1 (63-141)||(37733776-37733854)
chr1 (78-132)||(41677090-41677144)
chr1 (90-128)||(42908805-42908843)
chr1 (63-141)||(46116170-46116248)
chr1 (63-141)||(49251391-49251469)
chr1 (76-132)||(15051577-15051633)
chr1 (78-130)||(19424078-19424130)
chr1 (76-132)||(27745187-27745243)
chr1 (56-132)||(42831977-42832053)
[»] chr6 (22 HSPs)
chr6 (63-141)||(5288341-5288419)
chr6 (63-141)||(6270605-6270683)
chr6 (63-141)||(15126264-15126341)
chr6 (76-141)||(21507210-21507275)
chr6 (53-141)||(22983601-22983689)
chr6 (53-141)||(23804719-23804807)
chr6 (63-141)||(753308-753386)
chr6 (63-141)||(9491731-9491809)
chr6 (63-141)||(18904679-18904757)
chr6 (63-141)||(20716388-20716466)
chr6 (56-129)||(16251512-16251585)
chr6 (76-132)||(10424544-10424600)
chr6 (63-141)||(9438323-9438401)
chr6 (63-141)||(12089118-12089196)
chr6 (63-141)||(12101907-12101985)
chr6 (63-141)||(22389746-22389824)
chr6 (81-139)||(29284141-29284199)
chr6 (103-153)||(32238314-32238364)
chr6 (63-132)||(15288951-15289020)
chr6 (63-132)||(25020524-25020593)
chr6 (63-132)||(34396113-34396182)
chr6 (63-132)||(35190793-35190862)
[»] chr5 (21 HSPs)
chr5 (63-141)||(7234868-7234946)
chr5 (63-141)||(29144163-29144241)
chr5 (63-132)||(6014809-6014878)
chr5 (81-152)||(4674829-4674900)
chr5 (63-141)||(2029124-2029202)
chr5 (63-141)||(14487582-14487660)
chr5 (63-141)||(20945887-20945965)
chr5 (63-141)||(30403771-30403849)
chr5 (76-132)||(843377-843433)
chr5 (90-130)||(27241676-27241716)
chr5 (90-141)||(29050821-29050872)
chr5 (81-144)||(37303952-37304015)
chr5 (63-141)||(23925564-23925642)
chr5 (63-141)||(32158410-32158488)
chr5 (63-132)||(1244723-1244792)
chr5 (63-132)||(8015865-8015934)
chr5 (97-162)||(30733120-30733185)
chr5 (77-141)||(18872542-18872606)
chr5 (76-132)||(28378074-28378130)
chr5 (63-131)||(38618677-38618745)
chr5 (76-144)||(42618422-42618490)
[»] chr3 (27 HSPs)
chr3 (63-141)||(45713501-45713579)
chr3 (56-132)||(362973-363049)
chr3 (56-132)||(27066640-27066716)
chr3 (76-139)||(9167280-9167343)
chr3 (77-128)||(31902215-31902266)
chr3 (63-162)||(43774185-43774284)
chr3 (63-141)||(13539960-13540038)
chr3 (63-141)||(20623773-20623851)
chr3 (63-141)||(49146105-49146183)
chr3 (63-132)||(32508790-32508859)
chr3 (63-132)||(35477761-35477830)
chr3 (63-127)||(54983701-54983765)
chr3 (66-141)||(17439964-17440039)
chr3 (81-144)||(36331740-36331803)
chr3 (56-139)||(37279650-37279733)
chr3 (63-141)||(13616070-13616148)
chr3 (63-141)||(33206778-33206856)
chr3 (63-141)||(35483290-35483368)
chr3 (63-141)||(42271009-42271087)
chr3 (63-141)||(43566792-43566870)
chr3 (63-141)||(49639049-49639127)
chr3 (63-132)||(16277947-16278016)
chr3 (63-128)||(24537861-24537926)
chr3 (63-132)||(27739803-27739872)
chr3 (63-128)||(46328920-46328985)
chr3 (90-130)||(29559669-29559709)
chr3 (92-144)||(52030139-52030191)
[»] chr7 (18 HSPs)
chr7 (63-132)||(14102491-14102560)
chr7 (63-132)||(14412508-14412577)
chr7 (63-141)||(2366378-2366456)
chr7 (63-144)||(4169094-4169175)
chr7 (56-141)||(5787482-5787567)
chr7 (63-144)||(21285349-21285430)
chr7 (63-132)||(44843722-44843790)
chr7 (103-141)||(14967670-14967708)
chr7 (103-141)||(15397146-15397184)
chr7 (63-141)||(30152762-30152840)
chr7 (63-128)||(29658268-29658333)
chr7 (63-132)||(35368426-35368495)
chr7 (63-152)||(38451873-38451962)
chr7 (63-132)||(38792242-38792311)
chr7 (63-144)||(42286342-42286423)
chr7 (53-141)||(2261470-2261558)
chr7 (90-130)||(9498001-9498041)
chr7 (81-145)||(24304297-24304361)
[»] scaffold0178 (1 HSPs)
scaffold0178 (63-141)||(4344-4422)
[»] scaffold0002 (1 HSPs)
scaffold0002 (54-152)||(451362-451460)
[»] chr4 (26 HSPs)
chr4 (63-141)||(37032175-37032253)
chr4 (63-141)||(47017942-47018020)
chr4 (95-132)||(12835313-12835350)
chr4 (53-130)||(12856216-12856293)
chr4 (63-132)||(20753121-20753190)
chr4 (63-132)||(24234070-24234139)
chr4 (56-141)||(32885709-32885794)
chr4 (103-162)||(32048595-32048653)
chr4 (81-144)||(36954155-36954218)
chr4 (63-141)||(3442864-3442942)
chr4 (63-141)||(3465604-3465682)
chr4 (63-141)||(16201317-16201395)
chr4 (63-141)||(38433332-38433410)
chr4 (63-141)||(49280665-49280743)
chr4 (63-141)||(53697976-53698054)
chr4 (99-144)||(10147281-10147326)
chr4 (63-128)||(12820401-12820466)
chr4 (76-141)||(20955519-20955584)
chr4 (63-144)||(36008293-36008374)
chr4 (76-141)||(43115289-43115354)
chr4 (81-162)||(48968224-48968305)
chr4 (63-139)||(6637718-6637794)
chr4 (81-141)||(8690235-8690295)
chr4 (56-132)||(9924886-9924962)
chr4 (63-139)||(22478736-22478812)
chr4 (90-130)||(42395262-42395302)
[»] scaffold0219 (1 HSPs)
scaffold0219 (78-134)||(6644-6700)
[»] scaffold0031 (1 HSPs)
scaffold0031 (90-130)||(93977-94017)


Alignment Details
Target: chr2 (Bit Score: 163; Significance: 6e-87; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 81 - 399
Target Start/End: Complemental strand, 3955993 - 3955679
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactgaaatatactca-ggggacatgacttttaa 179  Q
    |||| ||| |||| |||||||||||| ||  ||| || |||||| ||| ||| |||||||| ||  |||||||||| ||||| |||||||||||||||||    
T  3955993 gtgaataagtgggatatccggagttcgaattccggcctctacatgtaacaatgtattgtccttgccaactgaaataaactcacggggacatgacttttaa 3955894  T
Q  180 ttttaactaccatcattcttttctttcnnnnnnnnnnnnnnnnnnctaccatcattcttgtggtaccatagacatatatttatttcattccttctcgagt 279  Q
    ||||||||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3955893 ttttaactaccatcattcttttcttt-----aaaaaaaaaaaaaactaccatcattcttgtggtaccatagacatatatttatttcattccttctcgagt 3955799  T
Q  280 ctccgacttttctacgaggtaggatatgtttgatcaagggattcttggatcaaattcttcaccattgttcgttgnnnnnnnnntaaagggctcaatttat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||    
T  3955798 ctccgacttttctacgaggtaggatatgtttgatcaagggattcttggatcaaattcttcaccattgttcgttgaaaaaaaaataaagggctcaatttat 3955699  T
Q  380 gaaagagaaacccaaattaa 399  Q
    ||||||||||||||||||||    
T  3955698 gaaagagaaacccaaattaa 3955679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 8234788 - 8234866
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||    
T  8234788 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgtattgtcc 8234866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 2304362 - 2304308
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||||| ||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  2304362 tggggtgtccggggttcgaaccccgacccctacatataataatacattgtccctg 2304308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 2114431 - 2114500
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| || ||| ||||| |||| |||||||||||||||||||||||||    
T  2114431 tagaattcaccttataaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatataataat 2114500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 11133175 - 11133095
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccct 143  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||||||||| ||||||| |||  |||||||||    
T  11133175 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccct 11133095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 36426842 - 36426930
Alignment:
Q  53 gcatagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||  |||||||||||  ||||| ||| ||| |||||| | |||||||| |||||| ||||||||||||||||||  |||||||    
T  36426842 gcatagtggctagaattcaccttataagatgaataagtggggtgttcggagttcgaaccccaacccctacatataataatgcattgtcc 36426930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 9796996 - 9796918
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||| ||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  |||||||    
T  9796996 tagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 9796918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 18386808 - 18386886
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||||||| ||| |||||| |||||||||| ||||||  |||||||||||||||||  |||||||    
T  18386808 tagaattcatcttataaggtgaataagtggggtgtccggagttcgaaccccagcccctacatataataatgcattgtcc 18386886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 21970463 - 21970524
Alignment:
Q  91 ggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactga 152  Q
    ||||||||||| |||| |||||||| |||| |||||||||||  ||||||||||| ||||||    
T  21970463 ggggtatccggggttcgaaccccgatccctgcatataataatgcattgtccctgtcaactga 21970524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 36520793 - 36520854
Alignment:
Q  80 ggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||| ||| |||||| ||||| |||| |||||||||||||||||||||||||  |||||||    
T  36520793 ggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcc 36520854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 44721700 - 44721769
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| ||||  |||| ||||||||||||| |||||||||||    
T  44721700 tagaattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataat 44721769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 3037618 - 3037697
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccc 142  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| ||||||| |||  ||||||||    
T  3037618 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccc 3037697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 11837088 - 11837021
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataata 130  Q
    ||||||||||   ||||||||| ||| || ||| ||||| |||| |||||||||||||||||||||||    
T  11837088 tagaattcactttataaggtgaataagtgaggtgtccggggttcgaaccccgacccctacatataata 11837021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 35502096 - 35502147
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||| |||||||||||||| |||||||||| ||||||||||  |||||||    
T  35502096 tggggtgtccggagttcaaactccgacccctatatataataatgcattgtcc 35502147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 580779 - 580857
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  580779 tagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcc 580857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 48
Target Start/End: Complemental strand, 3956084 - 3956054
Alignment:
Q  18 aatagagaaagagacatataacatgttggat 48  Q
    |||||||||||||||||||||||||||||||    
T  3956084 aatagagaaagagacatataacatgttggat 3956054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 17154748 - 17154670
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||| |||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  17154748 tagaactcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcc 17154670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 19905651 - 19905729
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| | |||| ||||| |||| |||||||||||||  ||||||||||  |||||||    
T  19905651 tagaattcaccttataaggtgaataagtcgggtgtccggggttcgaaccccgacccctgtatataataatgcattgtcc 19905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 20122471 - 20122549
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||| ||| ||| ||| || ||||| |||| ||||||| |||||||||||||||||  |||||||    
T  20122471 tagaattcaccttataagatgaataagtggcgtgtccggggttcgaaccccggcccctacatataataatgcattgtcc 20122549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 23683799 - 23683717
Alignment:
Q  59 tgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||||||||   ||||| ||| ||| |||||| || |  |||| |||||| |||||||||||||||||| ||||||||    
T  23683799 tgaatagaattcactttataagatgaataaatggggtgtctgaggttcgaaccccaacccctacatataataatgtattgtcc 23683717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 25406661 - 25406715
Alignment:
Q  78 aaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||| ||| |||||| |||||||||| ||||||||||| || ||||||||||    
T  25406661 aaggtgaataagtggggtgtccggagttcgaaccccgacccatatatataataat 25406715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 7086352 - 7086283
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| |||||||||| | ||| |||| || |||| ||||| |||||||||||    
T  7086352 tagaattcaccttataaggtgaataattggggtgttcggggttcgaatcccggcccctgcatataataat 7086283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 10262825 - 10262760
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| ||| |||||| || || |||| ||||||||||||| |||||||||||  |||||||    
T  10262825 ataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcc 10262760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 43468701 - 43468779
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| |||  |||||||    
T  43468701 tagaattcaccttataaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcattgtcc 43468779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 23239210 - 23239153
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataata 133  Q
    ||||||||| ||| |||||| ||||| |||||||||||||||||||||||||| ||||    
T  23239210 ataaggtgaataagtggggtgtccggggttcaaaccccgacccctacatataacaata 23239153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 15042361 - 15042439
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  15042361 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcc 15042439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 34073235 - 34073304
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||  |||||||||||||||||||    
T  34073235 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataat 34073304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 35301188 - 35301240
Alignment:
Q  92 gggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| |||||||||| ||||||||||||| |||||||||||  ||||||||||    
T  35301188 gggtgtccggagttcgaaccccgacccctgcatataataatgcattgtccctg 35301240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 11823061 - 11822999
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacata 125  Q
    ||||||||| |  ||||||||| ||| |||||| ||||| |||||||||||| ||||||||||    
T  11823061 tagaattcatcttataaggtgaataagtggggtgtccggggttcaaaccccggcccctacata 11822999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 17987448 - 17987514
Alignment:
Q  66 aattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||  ||||||||| |||||||||| ||||| |||| ||| ||| ||||| |||||||||||    
T  17987448 aattcaccttataaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataat 17987514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 36359714 - 36359788
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatatt 137  Q
    |||||||||||  ||||||||| ||| |||||| |||||  ||| ||| ||| ||||| ||||||||||||||||    
T  36359714 tagaattcaccttataaggtgaataagtggggtgtccgggattcgaactccggcccctgcatataataatatatt 36359788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 37219604 - 37219526
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||||||| ||| |||||| ||||| |||  |||||| || ||| ||||||||||||||||||||    
T  37219604 tagaattcatcttataaggtgaataaatggggtgtccggggtttgaaccccaacacctgcatataataatatattgtcc 37219526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 42688155 - 42688077
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||| | ||| |||||| | ||| |||| || ||||||||||||||||||||||  |||||||    
T  42688155 tagaattcaccttataaggtaaataagtggggtgttcggggttcgaatcccgacccctacatataataatgcattgtcc 42688077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 43508458 - 43508508
Alignment:
Q  77 taaggtgactaattggggtatccggagttcaaaccccgacccctacatata 127  Q
    |||||||| ||| |||||| ||||| |||||||||||| ||||||||||||    
T  43508458 taaggtgaataagtggggtgtccggggttcaaaccccggcccctacatata 43508508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 44070364 - 44070442
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| | |||| ||||  |||| |||| || ||||||||||||||||| ||||||||    
T  44070364 tagaattcaccttataaggtgaataagtagggtgtccgaggttcgaaccgcggcccctacatataataatgtattgtcc 44070442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 4798537 - 4798606
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  | ||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||    
T  4798537 tagaattcaccttacaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataat 4798606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 27558867 - 27558935
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||||| |||||||||| ||| |||||| || || |||| || |||||||||| |||||||||||    
T  27558867 tagaattcacctaataaggtgaataagtggggtgtctgg-gttcgaatcccgacccctgcatataataat 27558935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 41125429 - 41125498
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||| | |||||| ||| |||  ||||||||||||||||||||    
T  41125429 tagaattcaccttataaggtgaataagtgggatgtccggacttcgaacttcgacccctacatataataat 41125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 14683982 - 14683907
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||| |||||||||||  ||||||||| ||| |||| | ||||| |||| |||||||| |||| |||||||||||    
T  14683982 tagtgactagaattcaccttataaggtgaataagtgggatgtccggggttcgaaccccga-ccctgcatataataat 14683907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 41089180 - 41089224
Alignment:
Q  97 tccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||| |||||||||||||||||| |||||||||||  |||||||    
T  41089180 tccggtgttcaaaccccgacccctgcatataataatgcattgtcc 41089224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 15774308 - 15774386
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| |||||||||||||||||||||||||  |||||||    
T  15774308 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcc 15774386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 11405555 - 11405477
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||||||||| ||||||| |||  |||||||    
T  11405555 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtcc 11405477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 9527525 - 9527444
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||||||||||  ||||| ||| ||| |||||| ||| | |||||||||||||||||| ||||||| |||  ||||||||||    
T  9527525 tagaattcaccttataagatgaataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtccctg 9527444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 47939195 - 47939275
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    ||||||||||| |||||||||| ||| |||||| |||||||||| |||||| | |||| ||||||| |||  ||||||||||    
T  47939195 tagaattcacctaataaggtgaataagtggggtgtccggagttcgaacccc-aaccctgcatataacaatgcattgtccctg 47939275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 39994844 - 39994924
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccct 143  Q
    |||||||||||  ||||||||| ||| |||| | |||||  ||||||||||| ||||||||||||| |||  |||||||||    
T  39994844 tagaattcaccttataaggtgaataagtgggatgtccgggattcaaaccccggcccctacatataacaatgcattgtccct 39994924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 25819266 - 25819203
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| ||| |||||||||||| |||| ||||||| | |||||||||||||||  ||||||||||    
T  25819266 gtgaataagtggggtatccggggttcgaaccccggctcctacatataataatgcattgtccctg 25819203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 29491551 - 29491488
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  ||||||||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctg 29491488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 3532970 - 3533047
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||  ||||| |||||||||||||||||||  |||||||    
T  3532970 tagaattcaccttataaggtgaataagtggggtgtccggggttggaaccc-gacccctacatataataatgcattgtcc 3533047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 4354101 - 4354179
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||||   ||||||||| ||| |||||| |||| ||||| ||||||| ||||| |||||||||||  |||||||    
T  4354101 tagaattcactttataaggtgaataagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcattgtcc 4354179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 17350142 - 17350052
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactgaaatatactca-ggggacat 170  Q
    |||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  ||||||||||  ||||||  |||||||| ||||||||    
T  17350142 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatactcacggggacat 17350052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 37733854 - 37733776
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| || || |||||||||||  |||||||    
T  37733854 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatgcattgtcc 37733776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 41677144 - 41677090
Alignment:
Q  78 aaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||| ||| |||||| |||||||||| ||||||||||||  |||||||||||    
T  41677144 aaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataat 41677090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 42908843 - 42908805
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataa 128  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  42908843 tggggtatccggagttcgaaccccgacccctgcatataa 42908805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 46116170 - 46116248
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| |||||||||| ||||| |||| ||||||  ||||| ||||| |||||  |||||||    
T  46116170 tagaattcaccttataaggtgaataattggggtgtccggggttcgaaccccagcccctgcatatgataatgcattgtcc 46116248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 49251391 - 49251469
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||||   ||||||||| ||| |||||| || || |||| ||||||||||||| |||||||||||  |||||||    
T  49251391 tagaattcacattataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcc 49251469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 15051633 - 15051577
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||| ||| |||||| ||| ||||| |||||||||||| | |||||||||||    
T  15051633 ataaggtgaataagtggggtgtccagagtttaaaccccgacccttgcatataataat 15051577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 19424130 - 19424078
Alignment:
Q  78 aaggtgactaattggggtatccggagttcaaaccccgacccctacatataata 130  Q
    ||||||| ||| |||||| ||||| |||| ||||||||||||| |||||||||    
T  19424130 aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataata 19424078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 27745243 - 27745187
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||| ||| |||||| ||||| |||| |||||||| |||| |||||||||||    
T  27745243 ataaggtgaataaatggggtgtccggggttcgaaccccgatccctgcatataataat 27745187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 42832053 - 42831977
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||| |||||||||||  ||||||||| ||| |||||| ||||| |||  ||||||  ||||| |||||||||||    
T  42832053 tagtgactagaattcaccttataaggtgaataagtggggtgtccggggtttgaaccccagcccctgcatataataat 42831977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 5288341 - 5288419
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| |||||| ||| ||||||||||  |||||||||||| |||||||||||  |||||||    
T  5288341 tagaattcaccttataaggtgaataattgaggtgtccggagttcggaccccgacccctgcatataataatgcattgtcc 5288419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 6270605 - 6270683
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| |||||||||| | | | |||| ||||||| ||||| ||||||||||||||||||||    
T  6270605 tagaattcaccttataaggtgaataattggggtgttcagggttcgaaccccggcccctgcatataataatatattgtcc 6270683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 15126341 - 15126264
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| |||||||||| ||||||  ||||||||||||||||| ||||||||    
T  15126341 tagaattcaccttataaggtgaataaatggggtgtccggagttcgaacccc-tcccctacatataataatgtattgtcc 15126264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 21507210 - 21507275
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||| |||| ||| |||||| |||||||||||||| ||||||||| |||||||||||| |||||||    
T  21507210 ataaagtgaataagtggggtgtccggagttcaaactccgacccctgcatataataatacattgtcc 21507275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 22983689 - 22983601
Alignment:
Q  53 gcatagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||  |||||||||||  ||||| ||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||| |||||||    
T  22983689 gcatagtggttagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatacattgtcc 22983601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 23804719 - 23804807
Alignment:
Q  53 gcatagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||  |||||||||||  ||||| ||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||| |||||||    
T  23804719 gcatagtggttagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatacattgtcc 23804807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 753308 - 753386
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  |||||| || ||| |||||| ||| | |||| ||||||||||||||||||||||||| ||||||||    
T  753308 tagaattcatcttataaggggaataagtggggtgtccagggttcgaaccccgacccctacatataataatgtattgtcc 753386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 9491731 - 9491809
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||||||| ||| |||||| ||||| |||| ||||||| |||||||||||||||||  |||||||    
T  9491731 tagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcattgtcc 9491809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 18904679 - 18904757
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||| |||||| ||||||| ||| |||||||||||||  |||||||    
T  18904679 tagaattcaccttataaggtgaataagtggggtgtccagagttcgaaccccggcccatacatataataatgcattgtcc 18904757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 20716388 - 20716466
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||| ||| ||| ||||||||| ||||||| || ||||||||||||||||||||||  |||||||    
T  20716388 tagaattcatcttataagatgaataagtggggtatctggagttcgaatcccgacccctacatataataatgcattgtcc 20716466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 16251512 - 16251585
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataat 129  Q
    |||||| |||||||||||  ||||||||| ||| |||||| |||||||||| |||  |||||||| ||||||||    
T  16251512 tagtgactagaattcaccttataaggtgaataagtggggtgtccggagttcgaacaacgacccctgcatataat 16251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 10424544 - 10424600
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||| ||| |||||| |||||  |||||||| ||||||||||||||||||||    
T  10424544 ataaggtgaataagtggggtgtccgggattcaaaccacgacccctacatataataat 10424600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 9438401 - 9438323
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| | | |||||| ||||| |||| |||||| |||||| |||||||||||  |||||||    
T  9438401 tagaattcaccttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgcatataataatgcattgtcc 9438323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 12089196 - 12089118
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||| ||| ||||| |||||||||||  |||||||    
T  12089196 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcc 12089118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 12101985 - 12101907
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| | |||| ||||| |||| ||| ||| ||||| ||||||||||| ||||||||    
T  12101985 tagaattcaccttataaggtgaataagtagggtgtccggggttcgaacgccggcccctgcatataataatgtattgtcc 12101907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 22389746 - 22389824
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| |||||  ||| ||||| ||||||| |||||||||||  |||||||    
T  22389746 tagaattcaccttataaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcattgtcc 22389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 29284199 - 29284141
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgt 139  Q
    |||| ||| |||||| ||||| |||| |||||||| ||||||||||||||||| |||||    
T  29284199 gtgaataagtggggtgtccggggttcgaaccccgatccctacatataataatacattgt 29284141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 32238314 - 32238364
Alignment:
Q  103 gttcaaaccccgacccctacatataataatatattgtccctgttaactgaa 153  Q
    |||||||||||||| ||| ||||||| ||| |||||||| |||||||||||    
T  32238314 gttcaaaccccgactcctgcatataacaatgtattgtccttgttaactgaa 32238364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 15288951 - 15289020
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||| ||| ||| |||||| || ||||||| ||||||  |||||||||||||||||    
T  15288951 tagaattcaccttataagatgaataagtggggtgtctggagttcgaaccccagcccctacatataataat 15289020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 25020524 - 25020593
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||| | ||||| |||||||||||    
T  25020524 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaacccaggcccctgcatataataat 25020593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 34396182 - 34396113
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| | |||| |||||||||| ||| ||| ||||| |||||||||||    
T  34396182 tagaattcaccttataaggtgaataaatagggtgtccggagttcgaactccggcccctgcatataataat 34396113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 35190862 - 35190793
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| | ||| |||| ||| ||||||||| |||||||||||    
T  35190862 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataat 35190793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 7234868 - 7234946
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| ||||||||| || |||| |||||||||| ||||||||||||||  |||||||    
T  7234868 tagaattcaccttataaggtgaataaatggggtatctggggttcgaaccccgacctctacatataataatgcattgtcc 7234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 29144241 - 29144163
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  |||| |||| ||| |||||| || ||||||||||||||||||||| |||||||||||  |||||||    
T  29144241 tagaattcaccttataacgtgaataaatggggtgtctggagttcaaaccccgacccctgcatataataatgcattgtcc 29144163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 6014878 - 6014809
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||| ||| ||| || ||| ||||||||||||||||||| ||||||||||||||||    
T  6014878 tagaattcaccttataagatgaataagtgaggtgtccggagttcaaaccccgatccctacatataataat 6014809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 4674829 - 4674900
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactga 152  Q
    |||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  ||||||||||| ||||||    
T  4674829 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactga 4674900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 2029124 - 2029202
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| | ||| |||| || |||||||||| |||||||||||| |||||||    
T  2029124 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaatcccgacccctgcatataataatacattgtcc 2029202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 14487660 - 14487582
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||| ||||||  |||| |||||| ||||||||||||||||||  |||||||    
T  14487660 tagaattcaccttataaggtgaataagtgggatatccgaggttcgaaccccaacccctacatataataatgcattgtcc 14487582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 20945887 - 20945965
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| |||||| ||| ||||||| ||||| |||||||||||  |||||||    
T  20945887 tagaattcaccttataaggtgaataagtggggtgtccggatttcgaaccccggcccctgcatataataatgcattgtcc 20945965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 30403849 - 30403771
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||||||| ||| |||||  |||||||||| ||||||||    
T  30403849 tagaattcaccttataaggtgaataagtggggtgtccggggttcaaactccggcccctgtatataataatgtattgtcc 30403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 843377 - 843433
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||| ||| |||||| ||||| |||| ||||||| |||||||||||||||||    
T  843377 ataaggtgaataagtggggtgtccggggttcgaaccccgtcccctacatataataat 843433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 27241716 - 27241676
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataata 130  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  27241716 tggggtatccggagtttaaaccccgacccctgcatataata 27241676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 29050872 - 29050821
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||| |||||||||||||||||| ||||| |||||||||||  |||||||    
T  29050872 tggggtgtccggagttcaaaccccggcccctgcatataataatgcattgtcc 29050821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 37304015 - 37303952
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| ||| |||||| ||| | |||| ||||||||||||| |||||||||||| ||||||||||    
T  37304015 gtgaataagtggggtgtccagggttcgaaccccgacccctgcatataataatacattgtccctg 37303952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 23925642 - 23925564
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||| ||| ||| ||||||||||||  ||| ||||| ||||||| |||||||||||  |||||||    
T  23925642 tagaattcaccttataagatgaataagtggggtatccgggattcgaacccagacccctgcatataataatgcattgtcc 23925564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 32158410 - 32158488
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| | ||| |||| ||||||| ||||| |||||||||||  |||||||    
T  32158410 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcc 32158488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 1244723 - 1244792
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| || || |||| ||||| ||||||| |||||||||||    
T  1244723 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccctgacccctgcatataataat 1244792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 8015934 - 8015865
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| ||| |||||||    
T  8015934 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatgtaataat 8015865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 30733185 - 30733120
Alignment:
Q  97 tccggagttcaaaccccgacccctacatataataatatattgtccctgttaactgaaatatactca 162  Q
    |||||||||| ||||| |||| || |||||||||||| ||||||||||  ||||||  ||||||||    
T  30733185 tccggagttcgaaccctgacctctgcatataataatacattgtccctgccaactgagctatactca 30733120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 18872606 - 18872542
Alignment:
Q  77 taaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||| ||| |||||| | ||| |||| ||||||||||||| |||||||||||  |||||||    
T  18872606 taaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcc 18872542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 28378074 - 28378130
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||| ||| |||||| | ||| |||| |||||| ||||||||||||||||||    
T  28378074 ataaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataataat 28378130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 38618677 - 38618745
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataa 131  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||| | ||||||||||    
T  38618677 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccttgcatataataa 38618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 42618422 - 42618490
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| |||| ||| ||||||||||||  ||| |||||||||||||  ||||||||||  ||||||||||    
T  42618422 ataaagtgaataagtggggtatccgggattcgaaccccgacccctgtatataataatgcattgtccctg 42618490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 45713579 - 45713501
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| |||||||||| ||| ||| |||||||||||||||||  |||||||    
T  45713579 tagaattcaccttataaggtgaataagtggggtgtccggagttcgaactccggcccctacatataataatgcattgtcc 45713501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 363049 - 362973
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||| |||||||||||  |||| |||| ||| |||||||||||| |||| ||| ||||||||| |||||||||||    
T  363049 tagtgattagaattcaccttataaagtgaataagtggggtatccggggttcgaactccgacccctgcatataataat 362973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 27066716 - 27066640
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||| |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||| ||||||| |||||||||||    
T  27066716 tagtgactagaattcacctcataaggtgaataagtggggtgtccggggttcgaaccctgacccctgcatataataat 27066640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 9167280 - 9167343
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgt 139  Q
    ||||||||| ||| |||||| |||| ||||| ||||||||||||| |||||||||||| |||||    
T  9167280 ataaggtgaataactggggtgtccgaagttcgaaccccgacccctgcatataataatacattgt 9167343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 31902215 - 31902266
Alignment:
Q  77 taaggtgactaattggggtatccggagttcaaaccccgacccctacatataa 128  Q
    |||||||| ||| |||||| |||||||||| |||||||||||||||||||||    
T  31902215 taaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataa 31902266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 43774284 - 43774185
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactgaaatatactca 162  Q
    |||||||||||  ||||||||| ||| |||||| || || |||| ||||||||||||| ||||||| |||  ||||||||||  ||||||  ||||||||    
T  43774284 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatactca 43774185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 13539960 - 13540038
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||| | ||| |||||| ||||| |||| |||||| ||||||||||||||||||  |||||||    
T  13539960 tagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccaacccctacatataataatgcattgtcc 13540038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 20623773 - 20623851
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||| |||||| ||||| || ||||||||||||||||  |||||||    
T  20623773 tagaattcaccttataaggtgaataagtggggtgtcctgagttcgaaccctgatccctacatataataatgcattgtcc 20623851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 49146183 - 49146105
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  |||| |||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  |||||||    
T  49146183 tagaattcaccttataaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 49146105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 32508790 - 32508859
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| | ||| |||| ||||||||||||| |||||||||||    
T  32508790 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataat 32508859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 35477830 - 35477761
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| |||||||||| ||| ||||| |||| ||||||||||    
T  35477830 tagaattcaccttataaggtgaataagtggggtgtccggagttcgaactccgacacctaaatataataat 35477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 54983701 - 54983765
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatata 127  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||||||||| ||||||    
T  54983701 tagaattcaccttataaggtgaataaatggggtgtccggggttcgaaccccgacccctgcatata 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 17439964 - 17440039
Alignment:
Q  66 aattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||  ||||||||| ||| |||||||||||  |||||||| ||| ||||| |||||||||||  |||||||    
T  17439964 aattcaccttataaggtgaataagtggggtatccgaggttcaaacaccggcccctgcatataataatgcattgtcc 17440039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 36331740 - 36331803
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  ||||||||||    
T  36331740 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctg 36331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 37279733 - 37279650
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgt 139  Q
    |||||| || ||||||||  ||||||||| ||| |||||| || ||||||| |||||| ||| || ||||||||||| ||||||    
T  37279733 tagtgactataattcaccttataaggtgaataagtggggtgtctggagttcgaaccccaacctctgcatataataatgtattgt 37279650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 13616070 - 13616148
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||| ||| ||| |||||| ||||  |||| ||| |||||||||||||||||||||  |||||||    
T  13616070 tagaattcaccttataagatgaataagtggggtgtccgaggttcgaactccgacccctacatataataatgcattgtcc 13616148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 33206856 - 33206778
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||  ||||| |||||||||||  |||||||    
T  33206856 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtcc 33206778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 35483368 - 35483290
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||| |||  ||||||||| ||| |||||| |||||  ||| ||||||||||||| |||||||||||  |||||||    
T  35483368 tagaatttaccttataaggtgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcattgtcc 35483290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 42271009 - 42271087
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| | |||| |||||||||| ||||||| ||||| ||||||| |||  |||||||    
T  42271009 tagaattcaccttataaggtgaataagtagggtgtccggagttcgaaccccggcccctgcatataacaatgcattgtcc 42271087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 43566792 - 43566870
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| || |  |||| ||||||||||||| |||||||||||  |||||||    
T  43566792 tagaattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccgacccctgcatataataatgcattgtcc 43566870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 49639127 - 49639049
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  | ||||||| ||| |||||| | ||| |||| ||||||| |||||||||||||||||  |||||||    
T  49639127 tagaattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcc 49639049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 16277947 - 16278016
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||||||| |  ||||||||| ||| |||| | |||||||||| || |||||||||| |||||||||||    
T  16277947 tagaattcatcttataaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataat 16278016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 24537926 - 24537861
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataa 128  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||    
T  24537926 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataa 24537861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 27739872 - 27739803
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||| ||||||  |||| |||| ||| |||||| ||||| |||||||| ||| |||||||||||||||||    
T  27739872 tagagttcaccttataatgtgaataaatggggtgtccggggttcaaactccggcccctacatataataat 27739803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 46328920 - 46328985
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataa 128  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||    
T  46328920 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataa 46328985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 29559669 - 29559709
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataata 130  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  29559669 tggggtgtccgaagttcaaaccccgacctctacatataata 29559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 52030191 - 52030139
Alignment:
Q  92 gggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| ||||| |||| ||||||| ||||| |||||||||||| ||||||||||    
T  52030191 gggtgtccggggttcgaaccccggcccctgcatataataatacattgtccctg 52030139  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 14102560 - 14102491
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||||||||||| ||||| |||||||||||    
T  14102560 tagaattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataat 14102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 14412577 - 14412508
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||||||||||| ||||| |||||||||||    
T  14412577 tagaattcaccttataaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataat 14412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 2366456 - 2366378
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||  |||||| ||||||||||||| |||||||||||  |||||||    
T  2366456 tagaattcaccttataaggtgaataagtggggtgtctagagttcgaaccccgacccctgcatataataatgcattgtcc 2366378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 4169175 - 4169094
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    ||||||||||   ||||||||| ||| |||||| ||||| |||||||||||| ||| | ||||||| |||| ||||||||||    
T  4169175 tagaattcactttataaggtgaataagtggggtgtccggggttcaaaccccggcccttgcatataacaatacattgtccctg 4169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 5787567 - 5787482
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||| |||||||||||  ||||||||| ||| |||||| |  || |||||||||||| ||||| |||||||||||  |||||||    
T  5787567 tagtgactagaattcaccttataaggtgaataagtggggtgtttggggttcaaaccccggcccctgcatataataatgcattgtcc 5787482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 21285349 - 21285430
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| ||||||| |||  ||||||||||    
T  21285349 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctg 21285430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 44843790 - 44843722
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||| ||| ||| |||||| ||||| |||| |||||||||||||||||||||||||    
T  44843790 tagaattcaccttataagatgaataaatggggtgtccgg-gttcgaaccccgacccctacatataataat 44843722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 14967670 - 14967708
Alignment:
Q  103 gttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  14967670 gttcaaaccccgacccctacatataataatgcattgtcc 14967708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 15397146 - 15397184
Alignment:
Q  103 gttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  15397146 gttcaaaccccgacccctacatataataatgcattgtcc 15397184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 30152840 - 30152762
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||||||| ||| |||||| | ||| |||| |||||||||||||| ||||||||||  |||||||    
T  30152840 tagaattcatcttataaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcc 30152762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 29658268 - 29658333
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataa 128  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||    
T  29658268 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataa 29658333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 35368495 - 35368426
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| |||||| |||||||||| |||| |  |||||| ||||||||||    
T  35368495 tagaattcaccttataaggtgaataaatggggtgtccggagttcgaaccacagcccctaaatataataat 35368426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 38451962 - 38451873
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactga 152  Q
    |||||||||||  |||| |||| ||| |||||| |||||  ||| ||||||| ||||| ||||||| |||  ||||||||||| ||||||    
T  38451962 tagaattcaccttataatgtgaataagtggggtgtccgggattcgaaccccggcccctgcatataacaatgcattgtccctgtcaactga 38451873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 38792311 - 38792242
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| | |||| ||||| |||||||| | ||||||| |||||||||||    
T  38792311 tagaattcaccttataaggtgaataagtagggtgtccggggttcaaactctgacccctgcatataataat 38792242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 42286423 - 42286342
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||||||||||  ||||||| | ||| |||||| ||||| ||||||||| |  ||||||||||||| |||  ||||||||||    
T  42286423 tagaattcaccttataaggtaaataagtggggtgtccggtgttcaaacctcagcccctacatataacaatgcattgtccctg 42286342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 2261470 - 2261558
Alignment:
Q  53 gcatagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||  |||||||||||  ||||||||| ||| | |||| |||||  ||| ||||||| ||||| |||||||||||  |||||||    
T  2261470 gcatagtgtctagaattcaccttataaggtgaataagttgggtgtccgggattcgaaccccggcccctgcatataataatgcattgtcc 2261558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 9498041 - 9498001
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataata 130  Q
    |||||| ||||| |||| |||||||||||||||||||||||    
T  9498041 tggggtgtccggggttcgaaccccgacccctacatataata 9498001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 24304297 - 24304361
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgt 145  Q
    |||| ||| |||||| | |||||||| ||||||||||||| |||||||||||  ||||| |||||    
T  24304297 gtgaataaatggggtgttcggagttcgaaccccgacccctgcatataataatgcattgttcctgt 24304361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 4422 - 4344
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  |||| |||| ||| ||| || ||||| |||| ||||||||||||| ||||||||||| ||||||||    
T  4422 tagaattcaccttataaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatgtattgtcc 4344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 451362 - 451460
Alignment:
Q  54 catagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactga 152  Q
    |||||||  ||||||||| |  ||||| ||| ||| |||||| |||||||||| ||||||| ||||||||||||| |||  ||||||| || |||||||    
T  451362 catagtggctagaattcatcttataagatgaataagtggggtgtccggagttcgaaccccggcccctacatataacaatgcattgtccttgctaactga 451460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 37032175 - 37032253
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| || |||||||||| |||||||||||  |||||||    
T  37032175 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcattgtcc 37032253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 47017942 - 47018020
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  47017942 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcc 47018020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 12835350 - 12835313
Alignment:
Q  95 tatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12835350 tatccggagttcaaaccccgacccctccatataataat 12835313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 12856293 - 12856216
Alignment:
Q  53 gcatagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataata 130  Q
    ||||||||  |||||||||||  ||||||||| ||| |||||| ||||| |||| ||| ||||||||| |||||||||    
T  12856293 gcatagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccgaccccttcatataata 12856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 20753121 - 20753190
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||||||| ||| || ||| ||||| |||| ||||||| |||||||||||||||||    
T  20753121 tagaattcaccttataaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataat 20753190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 24234070 - 24234139
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    |||||||||||  ||||| ||| ||| |||||| ||||| |||||||||||| ||||| |||||||||||    
T  24234070 tagaattcaccttataagatgaataagtggggtgtccggggttcaaaccccggcccctgcatataataat 24234139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 32885794 - 32885709
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||| ||||||||||||  ||||||||| ||| |||||| ||||  |||| ||| ||||||||| |||||||||||  |||||||    
T  32885794 tagtggatagaattcaccttataaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcc 32885709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 32048595 - 32048653
Alignment:
Q  103 gttcaaaccccgacccctacatataataatatattgtccctgttaactgaaatatactca 162  Q
    |||||||||||||||||||||||||||||| | |||| |||||||| |||| ||| ||||    
T  32048595 gttcaaaccccgacccctacatataataatgt-ttgtacctgttaattgaactatgctca 32048653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 36954218 - 36954155
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  ||||||||||    
T  36954218 gtgaataaatggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctg 36954155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 3442942 - 3442864
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| || || |||| ||||||| |||| ||||||||||||  |||||||    
T  3442942 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggccccgacatataataatgcattgtcc 3442864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 3465682 - 3465604
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| ||| ||| ||||| |||||||||||  |||||||    
T  3465682 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtcc 3465604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 16201395 - 16201317
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| |  ||||||||| ||| | || | ||||||||||||||||| |||||||||| |||||||  |||||||    
T  16201395 tagaattcaacttataaggtgaataaataggatgtccggagttcaaaccccaacccctacatgtaataatgcattgtcc 16201317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 38433410 - 38433332
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| |||||| || || |||| ||| ||||| |||||||||||||||  |||||||    
T  38433410 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaactccgactcctacatataataatgcattgtcc 38433332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 49280665 - 49280743
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||||| ||| || ||| ||| | |||||||| ||||||||| |||||||||||  |||||||    
T  49280665 tagaattcaccttataaggtgaataagtgaggtgtccagggttcaaacaccgacccctgcatataataattcattgtcc 49280743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 53697976 - 53698054
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||||||||||  ||||||| | ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  53697976 tagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcc 53698054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 10147326 - 10147281
Alignment:
Q  99 cggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||    
T  10147326 cggagttcagaccccgacccctacatataacaatgcattgtccctg 10147281  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 12820401 - 12820466
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataa 128  Q
    |||||||||||  ||||||||| ||| |||||| ||| | |||| ||||||||||||| |||||||    
T  12820401 tagaattcaccttataaggtgaataagtggggtgtccagggttctaaccccgacccctgcatataa 12820466  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 20955584 - 20955519
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| ||| ||| |||||||  ||||||||||| |||  |||||||||||||| |||||||    
T  20955584 ataaggtgaataagtggagtatccgaggttcaaaccccaacctttacatataataatacattgtcc 20955519  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 36008374 - 36008293
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctg 144  Q
    |||||||||||  ||||||||| ||| |||||| | ||| |||| ||||||| ||||| ||||||| |||  ||||||||||    
T  36008374 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattgtccctg 36008293  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 43115354 - 43115289
Alignment:
Q  76 ataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    ||||||||| ||| |||||| ||||| |||| || | |||||||| |||||||||||| |||||||    
T  43115354 ataaggtgaataaatggggtgtccggggttcgaatctcgacccctgcatataataatacattgtcc 43115289  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 48968224 - 48968305
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtccctgttaactgaaatatactca 162  Q
    |||| ||| |||||| ||||| |||| ||||||| ||||| |||||||||||  ||||||||||  ||||||| ||| ||||    
T  48968224 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgaactatgctca 48968305  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 6637718 - 6637794
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgt 139  Q
    |||||||||||  ||||| ||| ||| |||||| | ||| |||| |||||| |||||| ||||||||||| ||||||    
T  6637718 tagaattcaccttataagatgaataagtggggtgttcggggttcgaaccccaacccctgcatataataatgtattgt 6637794  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 8690295 - 8690235
Alignment:
Q  81 gtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgtcc 141  Q
    |||| ||| |||||| ||||| |||| ||||||||||||| |||||||||||  |||||||    
T  8690295 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcc 8690235  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 9924962 - 9924886
Alignment:
Q  56 tagtgaatagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataat 132  Q
    ||||| ||| ||||||||  | ||||||| ||| ||| || ||||| |||| ||||||||||||| |||||||||||    
T  9924962 tagtggataaaattcaccatacaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataat 9924886  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 22478736 - 22478812
Alignment:
Q  63 tagaattcacccaataaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatatattgt 139  Q
    |||||||||||  ||||||||| ||| |||||| ||||| |||| || | || |||| ||||||||||||| |||||    
T  22478736 tagaattcaccttataaggtgaataaatggggtgtccggggttcgaatcacggccccgacatataataatacattgt 22478812  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 42395302 - 42395262
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataata 130  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  42395302 tggggtgtccggagttcgaaccccggcccctacatataata 42395262  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 6644 - 6700
Alignment:
Q  78 aaggtgactaattggggtatccggagttcaaaccccgacccctacatataataatat 134  Q
    ||||||| |||||||||| ||||| |||| ||||||| ||||| |||||||||||||    
T  6644 aaggtgaataattggggtgtccggggttcgaaccccggcccctgcatataataatat 6700  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 93977 - 94017
Alignment:
Q  90 tggggtatccggagttcaaaccccgacccctacatataata 130  Q
    |||||| |||||||||| |||||| ||||||||||||||||    
T  93977 tggggtgtccggagttcgaaccccaacccctacatataata 94017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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