View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15784_low_4 (Length: 374)
Name: NF15784_low_4
Description: NF15784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15784_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 357
Target Start/End: Original strand, 10710068 - 10710424
Alignment:
| Q |
1 |
aaatagtcaacacaagaagttaacaatgagaaagagtgaattgtatattggtctaattggtattgcaattggaattttctttgctttattagtagctttt |
100 |
Q |
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| T |
10710068 |
aaatagtcaacacaagaagtcaacaatgagaaagagtgaattgtatattggtctaattggtattgcaattggaattttctttgctttattagtatctttt |
10710167 |
T |
|
| Q |
101 |
tgctttatctggttgaaacagaggaaggtggaagaaaatgcatgcaaagaaagagatatggagttacaatatctaaatcaaagtgtgagagcaacaagtg |
200 |
Q |
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| T |
10710168 |
tgctttatctggtttaaacagaggaaggtggaagaaaatgcatgcaaagaaagagatatggagttacaatatctaaatcaaagtgtgagaacaactagtg |
10710267 |
T |
|
| Q |
201 |
ataagaaagtttcatttgaagggtcacaagacacacttgatagtaaaatcattgacgcgacgccgcgtaagatgttattggagacatacacaattgatga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
10710268 |
ataagaaagtttcatttgaagggtcacaagacacacttgatagtaaaatcattgacgcgacgccacgtaagatgttattggagacatacacaattgatga |
10710367 |
T |
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| Q |
301 |
tttgagaaaagcaacagaggatttcagttcaaattgtcacattgaagggtcagtttt |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10710368 |
tttgagaaaagcaacagaggatttcagttcaaattgtcacattgaagggtcagtttt |
10710424 |
T |
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