View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15785_low_17 (Length: 262)

Name: NF15785_low_17
Description: NF15785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15785_low_17
NF15785_low_17
[»] chr8 (38 HSPs)
chr8 (19-125)||(8610214-8610320)
chr8 (166-248)||(8609975-8610059)
chr8 (165-248)||(24431860-24431942)
chr8 (166-241)||(41477176-41477253)
chr8 (166-248)||(17741705-17741789)
chr8 (166-248)||(18029493-18029577)
chr8 (166-248)||(26632147-26632231)
chr8 (166-248)||(34955660-34955743)
chr8 (166-248)||(36912410-36912494)
chr8 (166-246)||(26749404-26749486)
chr8 (166-246)||(30470814-30470896)
chr8 (166-248)||(5212285-5212368)
chr8 (168-216)||(40283470-40283518)
chr8 (168-216)||(43524419-43524467)
chr8 (166-240)||(4625496-4625572)
chr8 (166-240)||(42860708-42860783)
chr8 (168-216)||(1958208-1958256)
chr8 (168-216)||(26244492-26244540)
chr8 (168-216)||(35931857-35931905)
chr8 (169-216)||(12272510-12272557)
chr8 (169-216)||(31129531-31129578)
chr8 (165-216)||(35099427-35099478)
chr8 (169-216)||(45101053-45101100)
chr8 (166-241)||(38584895-38584972)
chr8 (166-216)||(43618377-43618427)
chr8 (166-248)||(5735281-5735364)
chr8 (178-248)||(13814952-13815024)
chr8 (169-241)||(43525089-43525164)
chr8 (166-248)||(30289724-30289810)
chr8 (181-216)||(1634869-1634904)
chr8 (169-216)||(15053628-15053675)
chr8 (177-216)||(42859929-42859968)
chr8 (171-246)||(29637151-29637228)
chr8 (166-248)||(39811052-39811137)
chr8 (166-248)||(7990424-7990508)
chr8 (137-166)||(8610096-8610125)
chr8 (178-238)||(30532453-30532516)
chr8 (168-212)||(13947361-13947405)
[»] scaffold0100 (1 HSPs)
scaffold0100 (166-248)||(30532-30616)
[»] chr1 (38 HSPs)
chr1 (166-248)||(44334280-44334364)
chr1 (166-248)||(8464090-8464174)
chr1 (166-248)||(17783368-17783452)
chr1 (165-248)||(44929284-44929369)
chr1 (166-248)||(3755022-3755106)
chr1 (162-248)||(44451264-44451351)
chr1 (166-248)||(44651065-44651148)
chr1 (162-248)||(36302969-36303057)
chr1 (166-241)||(45239129-45239207)
chr1 (169-216)||(19578938-19578985)
chr1 (169-216)||(29919364-29919411)
chr1 (165-216)||(41542320-41542371)
chr1 (166-216)||(31468124-31468174)
chr1 (162-248)||(48729309-48729397)
chr1 (166-247)||(643817-643899)
chr1 (168-216)||(2478356-2478404)
chr1 (168-216)||(29523696-29523744)
chr1 (168-216)||(48388136-48388184)
chr1 (168-216)||(51494500-51494548)
chr1 (169-216)||(8468318-8468365)
chr1 (166-241)||(27630460-27630538)
chr1 (169-216)||(31159381-31159428)
chr1 (166-241)||(37420344-37420422)
chr1 (177-240)||(20584853-20584918)
chr1 (177-215)||(37822571-37822609)
chr1 (168-216)||(35847149-35847197)
chr1 (168-216)||(45362711-45362759)
chr1 (179-248)||(52933762-52933833)
chr1 (179-248)||(52941397-52941468)
chr1 (169-216)||(23092763-23092810)
chr1 (169-216)||(30878572-30878619)
chr1 (169-216)||(45456179-45456226)
chr1 (169-216)||(45623558-45623605)
chr1 (169-216)||(48404324-48404371)
chr1 (168-241)||(14096684-14096760)
chr1 (180-217)||(47300524-47300561)
chr1 (179-248)||(51520221-51520293)
chr1 (180-216)||(51156915-51156951)
[»] chr4 (41 HSPs)
chr4 (162-248)||(33526707-33526795)
chr4 (162-247)||(54356891-54356978)
chr4 (166-248)||(10089842-10089925)
chr4 (162-248)||(39049077-39049165)
chr4 (167-246)||(51392226-51392305)
chr4 (166-248)||(40596756-40596840)
chr4 (166-248)||(47750219-47750302)
chr4 (168-216)||(34199297-34199345)
chr4 (168-240)||(12158134-12158208)
chr4 (169-216)||(48506634-48506681)
chr4 (169-216)||(55560507-55560554)
chr4 (178-241)||(39113756-39113821)
chr4 (166-216)||(46917539-46917589)
chr4 (167-216)||(40721030-40721079)
chr4 (166-248)||(53184090-53184173)
chr4 (171-216)||(56054016-56054061)
chr4 (168-216)||(3533335-3533383)
chr4 (168-216)||(3618481-3618529)
chr4 (168-216)||(4981505-4981553)
chr4 (168-216)||(6290596-6290644)
chr4 (168-216)||(35809159-35809207)
chr4 (168-216)||(45081440-45081488)
chr4 (169-216)||(33523267-33523314)
chr4 (169-216)||(38173552-38173599)
chr4 (166-216)||(2215310-2215360)
chr4 (167-246)||(34564119-34564200)
chr4 (171-248)||(53348054-53348134)
chr4 (166-248)||(31848768-31848851)
chr4 (169-214)||(33604654-33604699)
chr4 (168-216)||(8991779-8991827)
chr4 (168-216)||(13094418-13094466)
chr4 (168-216)||(16020843-16020891)
chr4 (168-216)||(17329941-17329988)
chr4 (168-216)||(19272779-19272827)
chr4 (169-217)||(33077900-33077948)
chr4 (168-216)||(48403928-48403976)
chr4 (177-248)||(55408563-55408636)
chr4 (168-213)||(16175046-16175091)
chr4 (168-216)||(23389957-23390005)
chr4 (168-216)||(23540454-23540502)
chr4 (180-216)||(31336382-31336418)
[»] chr6 (18 HSPs)
chr6 (166-247)||(29428513-29428596)
chr6 (166-248)||(6380483-6380566)
chr6 (166-216)||(197797-197847)
chr6 (166-216)||(631511-631561)
chr6 (169-242)||(6725625-6725700)
chr6 (168-216)||(8660554-8660602)
chr6 (169-217)||(24348429-24348477)
chr6 (169-216)||(10883868-10883915)
chr6 (166-241)||(34328274-34328352)
chr6 (166-216)||(17961292-17961342)
chr6 (176-216)||(12501835-12501875)
chr6 (168-216)||(34838576-34838624)
chr6 (169-216)||(26654364-26654411)
chr6 (169-216)||(26760334-26760381)
chr6 (171-216)||(12512911-12512956)
chr6 (168-216)||(8669885-8669933)
chr6 (169-217)||(22627832-22627880)
chr6 (168-216)||(24933312-24933359)
[»] chr2 (34 HSPs)
chr2 (167-248)||(1987115-1987198)
chr2 (166-248)||(37245496-37245580)
chr2 (167-247)||(927887-927969)
chr2 (167-241)||(31174187-31174262)
chr2 (166-248)||(9074219-9074302)
chr2 (162-248)||(38901711-38901799)
chr2 (166-241)||(14152068-14152146)
chr2 (168-216)||(17485814-17485862)
chr2 (166-216)||(8852052-8852102)
chr2 (166-216)||(12855014-12855064)
chr2 (166-216)||(24997075-24997125)
chr2 (166-216)||(30822612-30822662)
chr2 (168-216)||(1308726-1308774)
chr2 (168-216)||(7588533-7588581)
chr2 (168-216)||(7763516-7763564)
chr2 (168-216)||(17929284-17929332)
chr2 (168-216)||(22351643-22351691)
chr2 (168-252)||(36209465-36209551)
chr2 (168-216)||(43021738-43021786)
chr2 (169-216)||(1073112-1073159)
chr2 (169-216)||(9117810-9117857)
chr2 (169-216)||(14382965-14383012)
chr2 (166-216)||(4296800-4296850)
chr2 (166-216)||(6333406-6333456)
chr2 (169-246)||(6362952-6363031)
chr2 (171-216)||(44279992-44280037)
chr2 (168-216)||(39490140-39490188)
chr2 (180-248)||(31192978-31193048)
chr2 (180-248)||(36855768-36855838)
chr2 (166-248)||(13151478-13151563)
chr2 (171-216)||(36526821-36526866)
chr2 (168-213)||(38997290-38997335)
chr2 (166-240)||(39434014-39434090)
chr2 (162-206)||(4278125-4278169)
[»] scaffold0012 (1 HSPs)
scaffold0012 (166-241)||(124009-124084)
[»] chr5 (38 HSPs)
chr5 (165-248)||(8176297-8176382)
chr5 (167-241)||(41153007-41153083)
chr5 (166-248)||(41263355-41263439)
chr5 (168-245)||(3454731-3454811)
chr5 (166-248)||(8681282-8681366)
chr5 (176-248)||(4577008-4577082)
chr5 (176-248)||(10569804-10569878)
chr5 (177-248)||(34918472-34918543)
chr5 (162-235)||(9274457-9274531)
chr5 (169-248)||(14278825-14278906)
chr5 (168-241)||(37882432-37882505)
chr5 (168-216)||(19241311-19241359)
chr5 (165-216)||(31013872-31013923)
chr5 (169-216)||(42807028-42807075)
chr5 (162-240)||(11954766-11954846)
chr5 (168-246)||(25032348-25032428)
chr5 (168-216)||(25670934-25670982)
chr5 (171-248)||(27407738-27407819)
chr5 (168-216)||(32976604-32976652)
chr5 (168-216)||(39008475-39008523)
chr5 (168-216)||(40888889-40888937)
chr5 (168-216)||(42317883-42317931)
chr5 (172-248)||(25652812-25652890)
chr5 (166-241)||(42608045-42608122)
chr5 (177-214)||(23649198-23649235)
chr5 (177-214)||(23809336-23809373)
chr5 (171-216)||(31008413-31008458)
chr5 (168-216)||(13479852-13479900)
chr5 (165-246)||(15972559-15972642)
chr5 (168-216)||(27942486-27942534)
chr5 (168-212)||(29619046-29619090)
chr5 (168-216)||(39238409-39238457)
chr5 (167-248)||(4938179-4938263)
chr5 (168-213)||(4219472-4219517)
chr5 (168-217)||(32363642-32363691)
chr5 (180-216)||(7651010-7651046)
chr5 (178-247)||(12912875-12912946)
chr5 (168-216)||(23089513-23089561)
[»] chr3 (55 HSPs)
chr3 (162-247)||(35424004-35424091)
chr3 (169-248)||(47701056-47701138)
chr3 (166-241)||(42601756-42601833)
chr3 (162-241)||(49147289-49147370)
chr3 (166-248)||(41890530-41890613)
chr3 (166-248)||(42601499-42601582)
chr3 (166-248)||(46572919-46573003)
chr3 (169-241)||(15493823-15493895)
chr3 (166-241)||(50017048-50017125)
chr3 (166-241)||(51427096-51427172)
chr3 (166-248)||(33934987-33935070)
chr3 (166-248)||(50033662-50033746)
chr3 (168-216)||(4045977-4046025)
chr3 (168-216)||(26165582-26165630)
chr3 (176-241)||(49823171-49823238)
chr3 (169-248)||(138973-139055)
chr3 (166-216)||(17466510-17466560)
chr3 (166-216)||(25790803-25790853)
chr3 (166-241)||(25832725-25832801)
chr3 (169-248)||(35853186-35853267)
chr3 (166-216)||(47144168-47144218)
chr3 (169-248)||(49710383-49710464)
chr3 (166-240)||(25450636-25450712)
chr3 (166-246)||(33795491-33795570)
chr3 (168-216)||(6048724-6048772)
chr3 (169-217)||(6832382-6832430)
chr3 (168-216)||(12974665-12974713)
chr3 (168-216)||(29701679-29701727)
chr3 (168-216)||(30418457-30418505)
chr3 (168-216)||(32120466-32120514)
chr3 (168-216)||(35472654-35472702)
chr3 (179-248)||(37410413-37410484)
chr3 (169-242)||(43022646-43022721)
chr3 (168-216)||(44084306-44084354)
chr3 (168-216)||(51999265-51999313)
chr3 (166-241)||(5845140-5845218)
chr3 (169-216)||(27847407-27847454)
chr3 (169-216)||(41183272-41183319)
chr3 (169-216)||(43473888-43473935)
chr3 (176-241)||(20139365-20139433)
chr3 (168-217)||(10426458-10426507)
chr3 (168-216)||(36178732-36178780)
chr3 (168-216)||(42560898-42560946)
chr3 (168-216)||(50415858-50415906)
chr3 (169-241)||(28410392-28410466)
chr3 (176-248)||(49357491-49357565)
chr3 (169-216)||(50734014-50734061)
chr3 (169-216)||(50778794-50778841)
chr3 (166-241)||(33748680-33748757)
chr3 (178-216)||(38572182-38572220)
chr3 (168-214)||(49028573-49028619)
chr3 (180-242)||(50176085-50176149)
chr3 (162-235)||(7521144-7521219)
chr3 (168-216)||(11908016-11908064)
chr3 (180-224)||(26550141-26550185)
[»] chr7 (28 HSPs)
chr7 (166-241)||(22737596-22737673)
chr7 (162-240)||(114480-114560)
chr7 (166-248)||(22191215-22191298)
chr7 (166-248)||(24793485-24793569)
chr7 (169-216)||(30566597-30566644)
chr7 (169-216)||(42881355-42881402)
chr7 (169-248)||(43571088-43571169)
chr7 (166-248)||(21654841-21654924)
chr7 (166-248)||(25218802-25218886)
chr7 (166-248)||(30630808-30630891)
chr7 (168-216)||(36518511-36518559)
chr7 (166-216)||(5813092-5813142)
chr7 (192-248)||(26013193-26013250)
chr7 (171-216)||(28318071-28318116)
chr7 (167-241)||(35193120-35193196)
chr7 (168-216)||(37887843-37887891)
chr7 (168-216)||(37951743-37951791)
chr7 (168-241)||(38970027-38970104)
chr7 (168-216)||(39769725-39769773)
chr7 (168-216)||(45549647-45549695)
chr7 (168-216)||(47159523-47159570)
chr7 (169-216)||(33078813-33078860)
chr7 (168-210)||(26812109-26812151)
chr7 (170-216)||(32130299-32130345)
chr7 (166-216)||(35029137-35029187)
chr7 (166-241)||(48984902-48984978)
chr7 (168-216)||(32748793-32748841)
chr7 (180-216)||(40302519-40302555)
[»] scaffold0054 (1 HSPs)
scaffold0054 (169-216)||(57771-57818)
[»] scaffold0016 (1 HSPs)
scaffold0016 (178-216)||(66100-66138)
[»] scaffold0362 (1 HSPs)
scaffold0362 (169-214)||(5353-5398)


Alignment Details
Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 8610320 - 8610214
Alignment:
Q  19 caaagtgcatgaaatcatatcatgatagaatttgatgatttcaaacttcactagaaattgctagaaagcttccctggataagtacggatagataacattc 118  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8610320 caaagtgcatgcaatcatatcatgctagaatttgatgatttcaaatttcactagaaattgctagtaagcttccctggataagtacggatagataacattc 8610221  T
Q  119 agatttg 125  Q
    |||||||    
T  8610220 agatttg 8610214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 8610059 - 8609975
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||| | ||||||||||||| ||||||    
T  8610059 cattcaacattcactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctctcc 8609975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 24431942 - 24431860
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| | | ||||||||||||| ||||||    
T  24431942 tcattcaacatccactttttcaattttcaacactccaaatcactttctctcttattcaatact-attcaacttttaccctctcc 24431860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 41477176 - 41477253
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttac 241  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||  |||||||||||||||| | |||||||||||||    
T  41477176 cattcaacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttac 41477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 17741705 - 17741789
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||  |||||||||||||| | | ||||||||||||| ||||||    
T  17741705 cattcaacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctctcc 17741789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 18029577 - 18029493
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||| ||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||||||    
T  18029577 cattcgacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 18029493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 26632231 - 26632147
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||| |||  |||||||||||||  ||||||||| | ||||||||||||||||||||    
T  26632231 cattcaacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactcattcaacttttactctctcc 26632147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 34955743 - 34955660
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||||||    
T  34955743 cattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 34955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 36912410 - 36912494
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||| | |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  36912410 cattcaacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactcattcaacttttaccctctcc 36912494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 26749486 - 26749404
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctct 246  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||||||  || |||||||||| | ||||||||||||| ||||    
T  26749486 cattcaacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttaccctct 26749404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 30470896 - 30470814
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctct 246  Q
    ||||||| ||||| ||||||||||| ||||||||||  |||||||||  ||||||||||||| | ||||||||||||||||||    
T  30470896 cattcaagatccattttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttactctct 30470814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 5212285 - 5212368
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||| ||||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  5212285 cattcaaca-ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 5212368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 40283470 - 40283518
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  40283470 ttcaacatccactttttcaattcccaacactccacatcattttctctct 40283518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 43524467 - 43524419
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  43524467 ttcaacatccactttttcaattcccaacactccacatcattttctctct 43524419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 4625572 - 4625496
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaactttta 240  Q
    |||||||||  |||||||||||||| |||||||||| || |||||||  ||||||||||||| | ||||||||||||    
T  4625572 cattcaacactcactttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaactttta 4625496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 42860708 - 42860783
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaactttta 240  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||  |||||||||||| | ||||||| ||||    
T  42860708 cattcaaca-ccactttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacattta 42860783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 1958256 - 1958208
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  1958256 ttcaacacccactttttcaattcccaacactccacatcattttctctct 1958208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 26244492 - 26244540
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  26244492 ttcaacattcactttttcaattcccaacactccacatcattttctctct 26244540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 35931857 - 35931905
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  35931857 ttcaacatccactttttcaatttccaacactccacatcattttctctct 35931905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 12272557 - 12272510
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||    
T  12272557 tcaacatccactttttcaattttcaacactccacttcattttctctct 12272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 31129578 - 31129531
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||    
T  31129578 tcaacaccaactttttcaattctcaacactccacatcattttctctct 31129531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 35099427 - 35099478
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||| ||||||||||||||| |||||||| | ||||||||||||||    
T  35099427 tcattcaacacccactttttcaattcccaacactctacatcattttctctct 35099478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 45101100 - 45101053
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  45101100 tcaacacccactttttcaattcccaacactccacatcattttctctct 45101053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 38584972 - 38584895
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttac 241  Q
    |||||||||  |||||||||||||| ||||||||||  |||||||||  ||||||||||||| |  ||||||||||||    
T  38584972 cattcaacacacactttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttac 38584895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 43618427 - 43618377
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||| ||||||| |||||||||| ||||||||||||||    
T  43618427 cattcaacacccactttatcaattcccaacactccacatcattttctctct 43618377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 5735281 - 5735364
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| |||||||||||||| |||| |||| | |||||||  |||||||||||||||| | |||||| |||||| ||||||    
T  5735281 cattcaaca-ccactttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctctcc 5735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 13814952 - 13815024
Alignment:
Q  178 actttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||  |||||||||| |||||||  |||||||||||||||| | ||||||| ||||| ||||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctctcc 13815024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 43525164 - 43525089
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctctt---attcaacaatgattcaacttttac 241  Q
    |||||| ||||||||||||||  |||||||||| |||||||||||||||   |||||||| | |||||| ||||||    
T  43525164 tcaacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacactcattcaatttttac 43525089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 30289810 - 30289724
Alignment:
Q  166 cattcaacatccacttttt--caattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||| |||||||||||  ||||||||||||||| | ||||||||||  ||||||||||| |   ||||||||||||| ||||||    
T  30289810 cattcaatatccactttttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctctcc 30289724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 1634904 - 1634869
Alignment:
Q  181 ttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1634904 ttttcaattctcaacactccacatcattttctctct 1634869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 15053628 - 15053675
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||||    
T  15053628 tcaacacccactttttcaattcccaacactccgcatcattttctctct 15053675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 42859929 - 42859968
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  42859929 cactttttcaattcccaacactccacatcattttctctct 42859968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 29637228 - 29637151
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctct--cttattcaacaatgattcaacttttactctct 246  Q
    |||||||| ||||||||||  |||||||||| || |||||||||  |||||| |||| | ||||||||||||| ||||    
T  29637228 aacatccattttttcaatttccaacactccacataattttctctttcttatttaacactcattcaacttttaccctct 29637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 39811137 - 39811052
Alignment:
Q  166 cattcaacatccactttttc-aattctcaacactccatatcatttt--ctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| |||||||||  |||||  | ||||||| ||||||||  ||||||||||||||| | ||||||||||||| ||||||    
T  39811137 cattcaacacccactttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctctcc 39811052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 7990424 - 7990508
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatca--ttttctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||| ||| |||| |||||||||||  | |  |||| |||||||||||||| | ||||||||||||| ||||||    
T  7990424 cattcaacacccactattttaattttcaacactccacgttattttttttctcttattcaacactcattcaacttttaccctctcc 7990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 8610125 - 8610096
Alignment:
Q  137 ttccttatttgggactaatgtctcattttc 166  Q
    ||||||||||||||||||||||||||||||    
T  8610125 ttccttatttgggactaatgtctcattttc 8610096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 30532516 - 30532453
Alignment:
Q  178 actttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttt 238  Q
    |||||||||||||  |||||||| ||||||||||||||   |||||||||| | ||||||||||    
T  30532516 actttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaacttt 30532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 13947361 - 13947405
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttct 212  Q
    ||||||| | ||||||||||||| |||||||||| ||||||||||    
T  13947361 ttcaacacctactttttcaattcccaacactccacatcattttct 13947405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 30616 - 30532
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| | ||||||||||||||||||||    
T  30616 cattcaacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttattcaacttttactctctcc 30532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 44334280 - 44334364
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| | ||||||||||||||||||||    
T  44334280 cattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttactctctcc 44334364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 8464090 - 8464174
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| | |||||| |||||||||||||    
T  8464090 cattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttactctctcc 8464174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 17783368 - 17783452
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||| ||||| ||||| |||| |||||||  |||||||||||||||| | ||||||||||||||||||||    
T  17783368 cattcaacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttactctctcc 17783452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 44929369 - 44929284
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||||| ||||||||||||||||| | || |||||||||||||  |||||||||| | ||||||||||||| ||||||    
T  44929369 tcattcaacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctctcc 44929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 3755106 - 3755022
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||  ||||||||||||| | | ||||||||||| ||||||    
T  3755106 cattcagcatccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttaccctctcc 3755022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 44451351 - 44451264
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||| ||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||||||    
T  44451351 ttttctttcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 44451264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 44651065 - 44651148
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  44651065 cattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 44651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 36302969 - 36303057
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||| ||||||||||| |||||||||| ||||||||||| || ||||||||  ||||||||||||   ||||||||||||| ||||||    
T  36302969 ttttctttcaacatccattttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctctcc 36303057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 45239129 - 45239207
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||   |||||||||| | |||||| ||||||    
T  45239129 cattcaacacccactttttcaattcccaacactccacatcattttctctctctttattcaacactcattcaatttttac 45239207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 19578985 - 19578938
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19578985 tcaacatccactttttcaattcccaacactccacatcattttctctct 19578938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 29919364 - 29919411
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  29919364 tcaacatctactttttcaattcccaacactccatatcattttctctct 29919411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 41542320 - 41542371
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  41542320 tcattcaacatccactttttcaattcccaacactccacatcatattctctct 41542371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 31468124 - 31468174
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  31468124 cattcaacacccactttttcaattcccaacactccacatcattttctctct 31468174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 48729309 - 48729397
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||| ||||||||||| |||||||||| | |||||| || |||||||||||  ||||||||||||   ||||||||||||| ||||||    
T  48729309 ttttctttcaacatccattttttcaatttttaacacttcacatcattttctctttcttattcaacacacattcaacttttaccctctcc 48729397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 643899 - 643817
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctc 247  Q
    ||||||||| ||||||||||||||| ||||||||||  |||||||||  ||||||||||||| | ||||||| ||||| |||||    
T  643899 cattcaaca-ccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctctc 643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 2478404 - 2478356
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  2478404 ttcaacacccactttttcaattcccaacactccacatcattttctctct 2478356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 29523696 - 29523744
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  29523696 ttcaacacccactttttcaattcccaacactccacatcattttctctct 29523744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 48388184 - 48388136
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  48388184 ttcaacacccactttttcaattcccaacactccacatcattttctctct 48388136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 51494548 - 51494500
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  51494548 ttcaacacccacttttttaattctcaacactccacatcattttctctct 51494500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 8468318 - 8468365
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  8468318 tcaacacccactttttcaattcccaacactccacatcattttctctct 8468365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 27630538 - 27630460
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctctt-attcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||| |||||||| | |||||| ||||||    
T  27630538 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 27630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 31159381 - 31159428
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  31159381 tcaacatctactttttcaattcccaacactccacatcattttctctct 31159428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 37420422 - 37420344
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctctt-attcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||| |||||||| | |||||| ||||||    
T  37420422 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 37420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 20584918 - 20584853
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaactttta 240  Q
    |||||||||||||| |||||||||| ||||||||||  |||||||| |||| | ||||||||||||    
T  20584918 cactttttcaattcccaacactccacatcattttctcactcttatttaacacttattcaactttta 20584853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 37822571 - 37822609
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttctctc 215  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  37822571 cactttttcaattctcaacactccacatcattttctctc 37822609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 35847197 - 35847149
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  35847197 ttcaacatccacttttttaatttccaacactccacatcattttctctct 35847149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 45362711 - 45362759
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||| |||||||||||||||||||||| |||| |||||||||    
T  45362711 ttcaacacccattttttcaattctcaacactccaaatcactttctctct 45362759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 52933833 - 52933762
Alignment:
Q  179 ctttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||  |||||||||  |||||||||||||  ||||||||| | ||||||||||||| ||||||    
T  52933833 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctcc 52933762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 52941468 - 52941397
Alignment:
Q  179 ctttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||  |||||||||  |||||||||||||  ||||||||| | ||||||||||||| ||||||    
T  52941468 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctcc 52941397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 23092763 - 23092810
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| ||||||||||  |||||||||||||    
T  23092763 tcaacacccactttttcaattcccaacactccacgtcattttctctct 23092810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 30878619 - 30878572
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||  |||||||||| ||||||||||||||    
T  30878619 tcaacacccactttttcaatttccaacactccacatcattttctctct 30878572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 45456226 - 45456179
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||| || |||||||||||    
T  45456226 tcaacacccactttttcaattcccaacactccacataattttctctct 45456179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 45623605 - 45623558
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| |||||||||||||  ||||||||| ||||||||||||||    
T  45623605 tcaacatctactttttcaattcctaacactccacatcattttctctct 45623558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 48404324 - 48404371
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| | ||||||||||||| |||||||||| ||||||||||||||    
T  48404324 tcaacaccaactttttcaattcccaacactccacatcattttctctct 48404371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 14096684 - 14096760
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattt--tctctctt-attcaacaatgattcaacttttac 241  Q
    ||||||| | ||||||||||||| |||||||||| |||||||  |||||||| |||||||| | |||||| ||||||    
T  14096684 ttcaacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattcaatttttac 14096760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 47300561 - 47300524
Alignment:
Q  180 tttttcaattctcaacactccatatcattttctctctt 217  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  47300561 tttttcaattctcagcactccacatcattttctctctt 47300524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 51520221 - 51520293
Alignment:
Q  179 ctttttcaattctcaacactccatatca--ttttctctctt-attcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||| ||||||||||| ||||  ||||||||||| ||| |||| | ||||||||||||| ||||||    
T  51520221 ctttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctcc 51520293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 51156951 - 51156915
Alignment:
Q  180 tttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||| |||||||||||| |||||||||||||    
T  51156951 tttttcaattttcaacactccatgtcattttctctct 51156915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 33526707 - 33526795
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttc--tctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||| | | ||||||||||||| ||||||    
T  33526707 ttttcattcaacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctctcc 33526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 54356978 - 54356891
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttc--tctcttattcaacaatgattcaacttttactctctc 247  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||||   |||||||||||||||||||    
T  54356978 ttttctttcaacatccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttactctctc 54356891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 10089842 - 10089925
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcatttt-ctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| |||||||||||||| |||| |||||| |||||||| ||||||||||||||| | ||||||||||||| ||||||    
T  10089842 cattcaacacccactttttcaattttcaatactccacatcatttttctctcttattcaacactcattcaacttttaccctctcc 10089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 39049165 - 39049077
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||| ||||||||||||||||| ||||  |||||||||| |||||||||||  |||||||||||| | ||||||||||||| ||||||    
T  39049165 ttttctttcaacatccacttttttaatttccaacactccacatcattttctctttcttattcaacattcattcaacttttaccctctcc 39049077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 51392226 - 51392305
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttctctcttattcaacaatgattcaacttttactctct 246  Q
    ||||||||  |||||||| |||||||||||||||| |||||||| |||||||||||||| |  |||||||||||| ||||    
T  51392226 attcaacacacacttttttaattctcaacactccacatcattttttctcttattcaacattcgttcaacttttaccctct 51392305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 40596840 - 40596756
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||| || || |||||||||| |||||||||||  ||||||||||||  |||||||||| | ||||||||||||||||||||    
T  40596840 cattcaagattcattttttcaattttcaacactccacgtcattttctctcttttattcaacacttattcaacttttactctctcc 40596756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 47750302 - 47750219
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||| || |||||||  |||||||||||||  ||||||||| | ||||||||||||| ||||||    
T  47750302 cattcaacatccactttttcaattccca-cactccacgtcattttctctctcttattcaacactcattcaacttttaccctctcc 47750219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 34199345 - 34199297
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  34199345 ttcaacatccactttttcaattcccaacactccacatcattttctctct 34199297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 12158134 - 12158208
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaactttta 240  Q
    |||||||||||| ||||| |||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||    
T  12158134 ttcaacatccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaactttta 12158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 48506681 - 48506634
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  48506681 tcaacatccactttttcaattttcaacactccacatcattttctctct 48506634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 55560554 - 55560507
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  55560554 tcaacatccactttttcaattcccaacactccacatcattttctctct 55560507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 39113821 - 39113756
Alignment:
Q  178 actttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttac 241  Q
    ||||||||||||| |||||||||| |||||||||||||  |||||||||| | |||||||||||||    
T  39113821 actttttcaattcccaacactccacatcattttctctcttttattcaacactcattcaacttttac 39113756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 46917589 - 46917539
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  46917589 cattcaacacccactttttcaattcccaacactccacatcattttctctct 46917539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 40721030 - 40721079
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  40721030 attcaacacccactttttcaattcccaacactccacatcattttctctct 40721079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 53184173 - 53184090
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| ||||||| || ||||||||||  ||||||||||||| | |||||||||| || ||||||    
T  53184173 cattcaaca-ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctctcc 53184090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 56054016 - 56054061
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  56054016 aacatccactttttcaattcccaacactccacatcattttctctct 56054061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 3533383 - 3533335
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  3533383 ttcaacacccactttttcaattcccaacactccacatcattttctctct 3533335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 3618529 - 3618481
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  3618529 ttcaacacccactttttcaattcccaacactccacatcattttctctct 3618481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 4981505 - 4981553
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  4981505 ttcaacacccactttttcaattcccaacactccacatcattttctctct 4981553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 6290596 - 6290644
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  6290596 ttcaacacccactttttcaattcccaacactccacatcattttctctct 6290644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 35809159 - 35809207
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  35809159 ttcaacatccactttttcaattcccaacattccacatcattttctctct 35809207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 45081488 - 45081440
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  45081488 ttcaacacccactttttcaattcccaacactccacatcattttctctct 45081440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 33523267 - 33523314
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  33523267 tcaacatccactttttcaattcccaacattccacatcattttctctct 33523314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 38173552 - 38173599
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  38173552 tcaacacccactttttcaattcccaacactccacatcattttctctct 38173599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 2215360 - 2215310
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  2215360 cattcaacacccactttttcaattcccaacactccacataattttctctct 2215310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 34564119 - 34564200
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctct 246  Q
    |||||||||||| ||||| |||||||||||||  |||| ||||  |||||||||||||||| | ||| ||||||||| ||||    
T  34564119 attcaacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttaccctct 34564200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 53348134 - 53348054
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||| |||||| | || |||||||||||||   |||||||||| | ||| ||||||||| ||||||    
T  53348134 aacatccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctcc 53348054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 31848851 - 31848768
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||| ||||||||||  |||||||||| ||||||||||  ||||||||||||| | ||||||| ||||| ||||||    
T  31848851 cattcaaca-ccattttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctcc 31848768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 33604654 - 33604699
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctct 214  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||    
T  33604654 tcaacacccactttttcaattcccaacactccacatcattttctct 33604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 8991779 - 8991827
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||    
T  8991779 ttcaacacccactttttgaattcccaacactccacatcattttctctct 8991827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 13094466 - 13094418
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||| ||||||||||| |||||||||| ||||||||||||||    
T  13094466 ttcaacacccattttttcaattcccaacactccacatcattttctctct 13094418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 16020843 - 16020891
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  16020843 ttcaacacccactttttcaattcccaacactccacattattttctctct 16020891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 17329988 - 17329941
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  17329988 ttcaacatccactttttcaattc-caacattccacatcattttctctct 17329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 19272779 - 19272827
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  19272779 ttcaacatttactttttcaattcccaacactccacatcattttctctct 19272827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 33077948 - 33077900
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctctt 217  Q
    |||| ||||||||||||||||  |||||||||| |||||||||||||||    
T  33077948 tcaatatccactttttcaatttccaacactccacatcattttctctctt 33077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 48403976 - 48403928
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| |||||||||||||  |||||||||| ||||||||||||||    
T  48403976 ttcaacattcactttttcaatttccaacactccacatcattttctctct 48403928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 55408636 - 55408563
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||  ||| || ||||||| ||||||||||||||  ||||||||| | |||||||||||||| |||||    
T  55408636 cactttttctcttcccagcactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 55408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 16175091 - 16175046
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctc 213  Q
    ||||||| ||| |||||||||| ||||||||||| |||||||||||    
T  16175091 ttcaacacccattttttcaattttcaacactccacatcattttctc 16175046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 23390005 - 23389957
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||  |||||||||||||| |||||||||| || |||||||||||    
T  23390005 ttcaacactcactttttcaattcccaacactccacattattttctctct 23389957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 23540502 - 23540454
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||  |||||||| | ||||||||||||||    
T  23540502 ttcaacacccactttttcaatttccaacactcaacatcattttctctct 23540454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 31336418 - 31336382
Alignment:
Q  180 tttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||  |||||||||||||    
T  31336418 tttttcaattctcaacactccacgtcattttctctct 31336382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 29428596 - 29428513
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctc 247  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| |||||    
T  29428596 cattcaacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctc 29428513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 6380566 - 6380483
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||  |||||||||||||   ||||||||||||| ||||||    
T  6380566 cattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctctcc 6380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 197797 - 197847
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  197797 cattcaacatccactttttcaattcccaacactccacgtcattttctctct 197847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 631511 - 631561
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  631511 cattcaacacccactttttcaattcccaacactccacatcattttctctct 631561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 6725700 - 6725625
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttact 242  Q
    |||||| ||||||||||  ||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||||    
T  6725700 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttact 6725625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 8660554 - 8660602
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  8660554 ttcaacacccactttttcaattcccaacactccacatcattttctctct 8660602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 24348429 - 24348477
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctctt 217  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  24348429 tcaacacccactttttcaattcccaacactccacatcattttctctctt 24348477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 10883868 - 10883915
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  10883868 tcaacatccactttttcaatttccaacactccacatcattttctctct 10883915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 34328274 - 34328352
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctctt-attcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||| |||||||| | |||||| ||||||    
T  34328274 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 34328352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 17961342 - 17961292
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  17961342 cattcaacacccactttttcaattcccaacactccacataattttctctct 17961292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 12501835 - 12501875
Alignment:
Q  176 ccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  12501835 ccactttttcaattctcaacaatccacatcattttctctct 12501875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 34838576 - 34838624
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  34838576 ttcaacactcactttttcaattcccaacactccacatcattttctctct 34838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 26654411 - 26654364
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| | |||||||||||||||||||||| || |||||||||||||    
T  26654411 tcaacacctactttttcaattctcaacactctatgtcattttctctct 26654364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 26760381 - 26760334
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| | |||||||||||||||||||||| || |||||||||||||    
T  26760381 tcaacacctactttttcaattctcaacactctatgtcattttctctct 26760334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 12512911 - 12512956
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||| |||||| |||| |||||||| |||||    
T  12512911 aacatccactttttcaattttcaacattccacatcattttttctct 12512956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 8669885 - 8669933
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||  ||||||| || || |||||||||||    
T  8669885 ttcaacatccactttttcaatttccaacacttcacattattttctctct 8669933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 22627832 - 22627880
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctctt 217  Q
    |||||| |||| |||||||||  |||||||||| |||||||||||||||    
T  22627832 tcaacacccacgttttcaatttccaacactccacatcattttctctctt 22627880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 24933359 - 24933312
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  24933359 ttcaacatccattttttcaatt-tcaacactccacattattttctctct 24933312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 1987115 - 1987198
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttc--tctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||| | ||||||||||||| ||||||    
T  1987115 attcaacattcactttttcaattctcaacactccacatcattttctatctcttattcaacactcattcaacttttaccctctcc 1987198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 37245496 - 37245580
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  37245496 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 37245580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 927969 - 927887
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctc 247  Q
    |||||||| ||||||||| ||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| |||||    
T  927969 attcaacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctc 927887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 31174262 - 31174187
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattt-tctctcttattcaacaatgattcaacttttac 241  Q
    |||||| ||||||||||||||||| |||||||||| || |||| |||||||||||||||| | |||||||||||||    
T  31174262 attcaatatccactttttcaattcccaacactccacattatttatctctcttattcaacactcattcaacttttac 31174187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 9074302 - 9074219
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||| ||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||||||    
T  9074302 cattcaaca-ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 9074219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 38901711 - 38901799
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||||  ||||||||||||||  ||||||||| |||||||  |||||||||||||||| |  |||||||||||| ||||||    
T  38901711 ttttcattcaacacacactttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctctcc 38901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 14152146 - 14152068
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctctt---attcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||   ||||||||   |||||||||||||    
T  14152146 cattcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaacttttac 14152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 17485814 - 17485862
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17485814 ttcaacatccactttttcaattcccaacactccacatcattttctctct 17485862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 8852052 - 8852102
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  8852052 cattcaacacccactttttcaattcccaacactccacatcattttctctct 8852102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 12855014 - 12855064
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  12855014 cattcaacacccactttttcaattcccaacactccacatcattttctctct 12855064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 24997075 - 24997125
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  24997075 cattcaacacccactttttcaattcccaacactccacatcattttctctct 24997125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 30822662 - 30822612
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  30822662 cattcaacacccactttttcaattcccaacactccacatcattttctctct 30822612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 1308774 - 1308726
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  1308774 ttcaacatccactttttcaatttccaacactccacatcattttctctct 1308726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 7588581 - 7588533
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  7588581 ttcaacacccactttttcaattcccaacactccacatcattttctctct 7588533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 7763564 - 7763516
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  7763564 ttcaacaccaactttttcaattctcaacactccacatcattttctctct 7763516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 17929332 - 17929284
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  17929332 ttcaacatccattttttcaattcccaacactccacatcattttctctct 17929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 22351691 - 22351643
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  22351691 ttcaacacccactttttcaattcccaacactccacatcattttctctct 22351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 36209551 - 36209465
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctc--tctt-attcaacaatgattcaacttttactctctcctatg 252  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||  |||| |||||||| | |||||| ||||| |||||||||||    
T  36209551 ttcaacacctactttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaattttta-tctctcctatg 36209465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 43021738 - 43021786
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  43021738 ttcaacacccactttttcaattcccaacactccacatcattttctctct 43021786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 1073159 - 1073112
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||    
T  1073159 tcaacatccactttttcaattttcaacactccacttcattttctctct 1073112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 9117810 - 9117857
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||    
T  9117810 tcaacacccactttttcaattttcaacactccatttcattttctctct 9117857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 14382965 - 14383012
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  14382965 tcaacatccactttttcaattcctaacactccacatcattttctctct 14383012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 4296850 - 4296800
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  4296850 cattcaacacccactttttcaattcccaacactccacattattttctctct 4296800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 6333456 - 6333406
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||||||  || | |||||||||||||||||||    
T  6333456 cattcaacatccactttttcaattcctaatattccatatcattttctctct 6333406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 6362952 - 6363031
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttttactctct 246  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||   | |||||||| | ||||||||||||| ||||    
T  6362952 tcaacatccactttttcaattc-caacactctacatcattttctctctcttaattcaacactcattcaacttttaccctct 6363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 44279992 - 44280037
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||    
T  44279992 aacacccactttttcaattttcaacactccacatcattttctctct 44280037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 39490140 - 39490188
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  39490140 ttcaacacccactttttcaattcccaacactccaaatcattctctctct 39490188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 31193048 - 31192978
Alignment:
Q  180 tttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||  |||||||||| ||||||||||  ||||||||||| | | ||||||||||||| ||||||    
T  31193048 tttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctctcc 31192978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 36855838 - 36855768
Alignment:
Q  180 tttttcaattctcaacactccatatcatttt--ctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||| |||||||||  || |||||  ||||||||||||||| | ||||||||||||| ||||||    
T  36855838 tttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctctcc 36855768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 13151563 - 13151478
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatca--ttttctctctt-attcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| ||||||| || || |  |||| |||||| |||||||| | ||||||||||||| ||||||    
T  13151563 cattcaacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctcc 13151478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 36526821 - 36526866
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||| ||||||||||||||| |||||||||| || |||||||||||    
T  36526821 aacacccactttttcaattcccaacactccacattattttctctct 36526866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 38997335 - 38997290
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctc 213  Q
    ||||||| ||||||||||||||| |||||| ||| |||||||||||    
T  38997335 ttcaacacccactttttcaattcgcaacacaccacatcattttctc 38997290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 39434090 - 39434014
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatca--ttttctctcttattcaacaatgattcaactttta 240  Q
    ||||||||| ||||||||||||||  ||||| |||| ||||  |||||||| ||||| |||| | ||||||||||||    
T  39434090 cattcaacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaactttta 39434014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 4278125 - 4278169
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatca 206  Q
    ||||| |||||||||||||||||  |||| |||||||||||||||    
T  4278125 ttttctttcaacatccactttttacattcccaacactccatatca 4278169  T

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Target: scaffold0012 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 124009 - 124084
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctcttattcaacaatgattcaacttttac 241  Q
    ||||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||| | |||||||||||||    
T  124009 cattcaacatccactttttcaatttccaacactccacatcattttttctcttattcaacactcattcaacttttac 124084  T

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Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 8176382 - 8176297
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||||||    
T  8176382 tcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 8176297  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 41153083 - 41153007
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttac 241  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||| | |||||||||||||    
T  41153083 attcaacatccattttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttac 41153007  T

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Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 41263355 - 41263439
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  41263355 cattcaacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 41263439  T

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Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 3454731 - 3454811
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttttactctc 245  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||   | |||||||| | |||||| ||||||||||    
T  3454731 ttcaacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttactctc 3454811  T

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Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 8681366 - 8681282
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||||||||  |||||||||||| | ||||||||||||| ||||||    
T  8681366 cattcgacatcaactttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctctcc 8681282  T

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Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 4577008 - 4577082
Alignment:
Q  176 ccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 4577082  T

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Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 10569878 - 10569804
Alignment:
Q  176 ccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||| |||||||||| |||||||| |  ||||||||||||| | ||||||||||||||||||||    
T  10569878 ccactttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttactctctcc 10569804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 34918543 - 34918472
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||||  |||||||||| |||||||||| |||||||||||| | ||||||||||||| ||||||    
T  34918543 cactttttcaatttccaacactccacatcattttctttcttattcaacactcattcaacttttaccctctcc 34918472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 9274531 - 9274457
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatca-ttttctctcttattcaacaatgattcaac 235  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||| | |||||||    
T  9274531 ttttctttcaacatccactttttcaattcccaacactccacatcatttttctctcttatttaacactcattcaac 9274457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 14278825 - 14278906
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||| ||| ||||||||||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  14278825 tcaacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 14278906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 37882505 - 37882432
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctcttattcaacaatgattcaacttttac 241  Q
    ||||||| ||| ||||||||||| |||||||||| |||||||| |||||||||||||  | |||||||||||||    
T  37882505 ttcaacacccattttttcaattcccaacactccacatcattttttctcttattcaacgctcattcaacttttac 37882432  T

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Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 19241311 - 19241359
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19241311 ttcaacacccactttttcaattctcaacactccacatcattttctctct 19241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 31013923 - 31013872
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  31013923 tcattcaacacccactttttcaattcccaacactccacatcattttctctct 31013872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 42807075 - 42807028
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  42807075 tcaacacccactttttcaattctcaacactccacatcattttctctct 42807028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 11954766 - 11954846
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaactttta 240  Q
    ||||||||||||| | ||||||  |||| ||||||||||| |||||||  |||||||||||||||| | ||||||||||||    
T  11954766 ttttcattcaacacctacttttctaattatcaacactccacatcattttctctctcttattcaacattcattcaactttta 11954846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 25032348 - 25032428
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctct 246  Q
    ||||||| |||| |||||||||  |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||    
T  25032348 ttcaacacccaccttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctct 25032428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 25670982 - 25670934
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  25670982 ttcaacacccactttttcaattcccaacactccacatcattttctctct 25670934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 27407819 - 27407738
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcatttt----ctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||||||||||  ||| |||||| ||||||||    ||||||||||||||| | ||||||||||||| ||||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctcc 27407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 32976652 - 32976604
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  32976652 ttcaacacccactttttcaattcccaacactccacatcattttctctct 32976604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 39008475 - 39008523
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  39008475 ttcaacatccactttttcaattcccaacactccaaatcgttttctctct 39008523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 40888889 - 40888937
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  40888889 ttcaacacccactttttcaattcccaacactccacatcattttctctct 40888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 42317883 - 42317931
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||||    
T  42317883 ttcaacattcactttttcaatttccaacactccatatcattttctctct 42317931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 25652812 - 25652890
Alignment:
Q  172 acatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||| ||||||| || |||||||  |||||||||||||||| | ||| || |||||| ||||||    
T  25652812 acatccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctctcc 25652890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 42608122 - 42608045
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttac 241  Q
    ||||||||||||  |||||||||| | |||||||||  ||||||||||||  |||||||||| | |||||||||||||    
T  42608122 cattcaacatccgttttttcaattattaacactccacgtcattttctctcttttattcaacacttattcaacttttac 42608045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 23649235 - 23649198
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttctct 214  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23649235 cactttttcaattcccaacactccatatcattttctct 23649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 23809336 - 23809373
Alignment:
Q  177 cactttttcaattctcaacactccatatcattttctct 214  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23809336 cactttttcaattcccaacactccatatcattttctct 23809373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 31008458 - 31008413
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||    
T  31008458 aacacccactttttcaattctcaacacttcacatcattttctctct 31008413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 13479900 - 13479852
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||| ||||| |||||||||| ||||||||||||||    
T  13479900 ttcaacacccacttttttaattcccaacactccacatcattttctctct 13479852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 15972559 - 15972642
Alignment:
Q  165 tcattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttactctct 246  Q
    ||||| |||||||||||||||||||  ||||| || | || ||||||||  |||||||||||| | ||||||||||||| ||||    
T  15972559 tcatttaacatccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttaccctct 15972642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 27942486 - 27942534
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||| | |||||||||| ||||||||||||||    
T  27942486 ttcaacacccactttttcaatccccaacactccacatcattttctctct 27942534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 29619090 - 29619046
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttct 212  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||    
T  29619090 ttcaacacccactttttcaattcccaacactccacatcattttct 29619046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 39238409 - 39238457
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||  ||||||||||||| |||||||||| ||||||||||||||    
T  39238409 ttcaacatttactttttcaattcccaacactccacatcattttctctct 39238457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 4938179 - 4938263
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||  || ||||||||||||||| |||| | |||||||||||||   | |||||||| | ||||||||||||| ||||||    
T  4938179 attcaacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacactaattcaacttttaccctctcc 4938263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 4219517 - 4219472
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctc 213  Q
    ||||||| ||||||||||||||| ||||||| || |||||||||||    
T  4219517 ttcaacacccactttttcaattcccaacacttcacatcattttctc 4219472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 32363691 - 32363642
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctctt 217  Q
    ||||||| ||||||||| |||| ||||||||||| || ||||||||||||    
T  32363691 ttcaacacccacttttttaattttcaacactccacattattttctctctt 32363642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 7651010 - 7651046
Alignment:
Q  180 tttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  7651010 tttttcaattcccaacactccacatcattttctctct 7651046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 12912875 - 12912946
Alignment:
Q  178 actttttcaattctcaacactccatatcatttt--ctctcttattcaacaatgattcaacttttactctctc 247  Q
    ||||||| |||||  ||||||||| ||||||||  |||||||||| |||| | ||||||||||||| |||||    
T  12912875 acttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctctc 12912946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 23089513 - 23089561
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||| ||||| ||||||| || ||||||||||||||    
T  23089513 ttcaacacccacttttttaattcccaacacttcacatcattttctctct 23089561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 35424091 - 35424004
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatca--ttttctctcttattcaacaatgattcaacttttactctctc 247  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||  ||||||||||||||||||| | |||| |||||||| |||||    
T  35424091 ttttcattcaacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctctc 35424004  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 47701138 - 47701056
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatca---ttttctctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||| |||||||||||||||||||||||||| ||||   ||||||||||||||||||| | ||| ||||||||||||||||    
T  47701138 tcaacacccactttttcaattctcaacactccacatcatttttttctctcttattcaacactcattaaacttttactctctcc 47701056  T

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Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 42601756 - 42601833
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | |||||||||||||    
T  42601756 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 42601833  T

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Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 49147370 - 49147289
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttac 241  Q
    ||||| ||||||||| ||||||||||||| |||||||||| ||||||||||  ||||||||||||| | |||||||||||||    
T  49147370 ttttctttcaacatctactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 49147289  T

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Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 41890530 - 41890613
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  41890530 cattcaacatc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 41890613  T

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Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 42601582 - 42601499
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | ||||||||||||| ||||||    
T  42601582 cattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 42601499  T

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Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 46573003 - 46572919
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||| | | ||||||||||||| ||||||    
T  46573003 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactcattcaacttttaccctctcc 46572919  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 15493895 - 15493823
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctcttattcaacaatgattcaacttttac 241  Q
    |||||| || |||||||||||| |||||||||| |||| |||||||||||||||||| | |||||||||||||    
T  15493895 tcaacaccctctttttcaattcccaacactccacatcactttctctcttattcaacattcattcaacttttac 15493823  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 50017048 - 50017125
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttac 241  Q
    ||||||| ||||||||||||||||| |||||||| | |||||||||||  |||||||||||| | |||||||||||||    
T  50017048 cattcaaaatccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttac 50017125  T

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Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 51427096 - 51427172
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | |||||||||||||    
T  51427096 cattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 51427172  T

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Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 33934987 - 33935070
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||||||||||| | | ||||||||||| ||||||    
T  33934987 cattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctctcc 33935070  T

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Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 50033662 - 50033746
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcatttt--ctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||| ||||  ||||| || | ||||||||  ||||||||||||||| | ||||||||||||||||||||    
T  50033662 cattcaacatccacttttttaatttccaacattctacatcattttttctctcttattcaacactcattcaacttttactctctcc 50033746  T

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Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 4045977 - 4046025
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  4045977 ttcaacatccactttttcaattcccaacactccacatcattttctctct 4046025  T

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Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 26165630 - 26165582
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  26165630 ttcaacatccactttttcaattcccaacactccacatcattttctctct 26165582  T

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Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 49823238 - 49823171
Alignment:
Q  176 ccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttac 241  Q
    ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | |||||||||||||    
T  49823238 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 49823171  T

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Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 138973 - 139055
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattt--tctctctt-attcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| |||||||||||| |||||||||| |||||||  |||||||| |||||||| | ||||||||||||| ||||||    
T  138973 tcaacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcattcaacttttaccctctcc 139055  T

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Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 17466510 - 17466560
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  17466510 cattcaacacccactttttcaattcccaacactccacatcattttctctct 17466560  T

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Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 25790853 - 25790803
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  25790853 cattcaacacccactttttcaattcccaacactccacatcattttctctct 25790803  T

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Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 25832801 - 25832725
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| ||||||| || ||||||||||  ||||||||||||| | |||||||||||||    
T  25832801 cattcaaca-ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaacttttac 25832725  T

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Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 35853267 - 35853186
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||| ||||||||||  ||| |||||||||| ||||||||||  ||||||||||||| | |||||||||||||| |||||    
T  35853267 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 35853186  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 47144168 - 47144218
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  47144168 cattcaacacccactttttcaattcccaacactccacatcattttctctct 47144218  T

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Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 49710464 - 49710383
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||| ||||||||||  ||| |||||||||| ||||||||||  ||||||||||||| | |||||||||||||| |||||    
T  49710464 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 49710383  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 25450712 - 25450636
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaactttta 240  Q
    ||||||||| ||| ||||||||||| |||| ||||| ||||||||||  ||||||||||||| | ||||||||||||    
T  25450712 cattcaacacccattttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaactttta 25450636  T

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Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 33795570 - 33795491
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctct--cttattcaacaatgattcaacttttactctct 246  Q
    ||||||||||||||||||| ||||| ||||| |||   |||||||||||  ||||||||||| | ||||||||||||||||||    
T  33795570 cattcaacatccacttttttaattcccaacaatcc---tcattttctctttcttattcaacactcattcaacttttactctct 33795491  T

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Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 6048772 - 6048724
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  6048772 ttcaacacccactttttcaattcccaacactccacatcattttctctct 6048724  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 6832382 - 6832430
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctctt 217  Q
    |||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  6832382 tcaacatccactttttcaattcccaacactccacatcattttctttctt 6832430  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 12974665 - 12974713
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  12974665 ttcaacacccactttttcaattcccaacactccacatcattttctctct 12974713  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 29701679 - 29701727
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  29701679 ttcaacacccactttttcaattcccaacactccacatcattttctctct 29701727  T

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Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 30418505 - 30418457
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  30418505 ttcaacacccactttttcaattcccaacactccacatcattttctctct 30418457  T

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Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 32120514 - 32120466
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  32120514 ttcaacacccactttttcaattcccaacactccacatcattttctctct 32120466  T

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Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 35472702 - 35472654
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||    
T  35472702 ttcaacatccactttttcaattcccaacactccacattattttctctct 35472654  T

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Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 37410484 - 37410413
Alignment:
Q  179 ctttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    |||||||||||| ||| |||||| ||||||||||||||  ||||||||| | ||||||||||||| ||||||    
T  37410484 ctttttcaattcccaatactccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 37410413  T

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Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 43022646 - 43022721
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttact 242  Q
    |||||| ||||||||||  ||| |||||||||| |||||||  |||||||||||||||| | ||||||||||||||    
T  43022646 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttact 43022721  T

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Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 44084306 - 44084354
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  44084306 ttcaacacccactttttcaattcccaacactccacatcattttctctct 44084354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 51999313 - 51999265
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  51999313 ttcaacacccactttttcaattcccaacactccacatcattttctctct 51999265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 5845218 - 5845140
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctctt-attcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||  |||||||| |||||||| | |||||| ||||||    
T  5845218 cattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 5845140  T

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Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 27847407 - 27847454
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||    
T  27847407 tcaacatccactttttcaatttccaacactccacatcattttctctct 27847454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 41183272 - 41183319
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  41183272 tcaacacccactttttcaattcccaacactccacatcattttctctct 41183319  T

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Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 43473888 - 43473935
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  43473888 tcaacatccactttttcaattcccaacattccagatcattttctctct 43473935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 20139365 - 20139433
Alignment:
Q  176 ccactttttcaattctcaacactccatatcattttctctc---ttattcaacaatgattcaacttttac 241  Q
    ||||||||||||||||||||||| || |||||||||||||   | |||||||| | |||||||||||||    
T  20139365 ccactttttcaattctcaacacttcacatcattttctctctcttaattcaacactcattcaacttttac 20139433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 10426507 - 10426458
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctctt 217  Q
    ||||||| ||| ||||||||||| |||||||||| |||||||||||||||    
T  10426507 ttcaacacccattttttcaattcccaacactccacatcattttctctctt 10426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 36178780 - 36178732
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| ||||||| || ||||||||||||||    
T  36178780 ttcaacacccactttttcaattcccaacacttcaaatcattttctctct 36178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 42560898 - 42560946
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  42560898 ttcaacacccactttttcaattcccaacattccacatcattttctctct 42560946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 50415906 - 50415858
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||  |||||||||| ||||||||||||||    
T  50415906 ttcaacacccactttttcaatttccaacactccacatcattttctctct 50415858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 28410392 - 28410466
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttac 241  Q
    |||||| ||||||||||  ||| ||||||||||  ||||||||||||  |||||||||| | |||||||||||||    
T  28410392 tcaacacccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttac 28410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 49357565 - 49357491
Alignment:
Q  176 ccactttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| |||||  |||| | |||||||||||||||||  ||||||||| | ||||||||||||| ||||||    
T  49357565 ccacttttttaattcctaacatttcatatcattttctctctcttattcaacactcattcaacttttaccctctcc 49357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 50734014 - 50734061
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||  ||| |||||| ||||||||||||||    
T  50734014 tcaacatccactttttcaatttccaaaactccacatcattttctctct 50734061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 50778841 - 50778794
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||  ||| |||||| ||||||||||||||    
T  50778841 tcaacatccactttttcaatttccaaaactccacatcattttctctct 50778794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 33748680 - 33748757
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctc--ttattcaacaatgattcaacttttac 241  Q
    ||||||||| | | ||||||||||  |||||||||| |||||||||||||  ||| |||||| | |||||||||||||    
T  33748680 cattcaacacctattttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttac 33748757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 38572220 - 38572182
Alignment:
Q  178 actttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||||| || |||||||||||    
T  38572220 actttttcaattctcaacactccacattattttctctct 38572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 49028619 - 49028573
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctct 214  Q
    |||||||  |||||||| ||||| |||||||||||||||||||||||    
T  49028619 ttcaacacacacttttttaattcccaacactccatatcattttctct 49028573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 50176149 - 50176085
Alignment:
Q  180 tttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttact 242  Q
    ||||||||||| |||||||||| |||||||  |||||||||||||||    ||||||||||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctcttattcaacgcatattcaacttttact 50176085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 7521219 - 7521144
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaac 235  Q
    ||||| ||||||| || |||||||||||  ||||||| || ||||||||||  ||||||||||||| | |||||||    
T  7521219 ttttctttcaacacccgctttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaac 7521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 11908016 - 11908064
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||  |||||||||| |||||||| |||||    
T  11908016 ttcaacacccactttttcaatttccaacactccacatcattttttctct 11908064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 26550185 - 26550141
Alignment:
Q  180 tttttcaattctcaacactccatatcattttctctcttattcaac 224  Q
    ||||||||||  || ||||||| ||||||||||||||||||||||    
T  26550185 tttttcaatttccaccactccacatcattttctctcttattcaac 26550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 22737673 - 22737596
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||||| | |||||||||||||    
T  22737673 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttac 22737596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 114480 - 114560
Alignment:
Q  162 ttttcattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaactttta 240  Q
    ||||| ||||||| ||||||||| |||||||||||||||| |||||||  |||||||||||||||| | ||| ||||||||    
T  114480 ttttctttcaacacccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaactttta 114560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 22191215 - 22191298
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||  |||||||||| |||||||  |||||||||||||||| | ||||||||||||| ||||||    
T  22191215 cattcaaca-ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 22191298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 24793485 - 24793569
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctc--tcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| || ||||||||| || |||||||||| |||||||||||  |||||||||||| | ||||||||||||| ||||||    
T  24793485 cattcaacaccccctttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttacactctcc 24793569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 30566597 - 30566644
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  30566597 tcaacacccactttttcaattctcaacactccacatcattttctctct 30566644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 42881355 - 42881402
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  42881355 tcaacatccactttttcaattcccaacactccacatcattttctctct 42881402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 43571169 - 43571088
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||||| ||||||||||  ||| |||||||||| ||||||||||  ||||||||||||| | |||||||||||||| |||||    
T  43571169 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctcc 43571088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 21654841 - 21654924
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||||||||  |||||||||| |||||||  |||||||||||||||| | ||||||| ||||| ||||||    
T  21654841 cattcaaca-ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctcc 21654924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 25218886 - 25218802
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttct--ctcttattcaacaatgattcaacttttactctctcc 248  Q
    |||| |||||||||||||||||||  ||||||| |||||||||||||  ||||||||||| | | ||| ||||||||| ||||||    
T  25218886 catttaacatccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctctcc 25218802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 30630891 - 30630808
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct--tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||| ||||||||| ||||| |||||||||| || |||||||||||  ||||||| | | ||||||||||||||||||||    
T  30630891 cattcaaca-ccacttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttactctctcc 30630808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 36518511 - 36518559
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  36518511 ttcaacacccactttttcaattcccaacactccacatcattttctctct 36518559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 5813092 - 5813142
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| ||||||||||||||| ||||||| || ||||||||||||||    
T  5813092 cattcaacacccactttttcaattcccaacactgcacatcattttctctct 5813142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 26013250 - 26013193
Alignment:
Q  192 caacactccatatcattttctctct-tattcaacaatgattcaacttttactctctcc 248  Q
    ||||||||||||||||||||||||| | ||||| | | ||||||||||||||||||||    
T  26013250 caacactccatatcattttctctctcttttcaatactcattcaacttttactctctcc 26013193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 28318116 - 28318071
Alignment:
Q  171 aacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||    
T  28318116 aacatccacttttttaattcccaacactccacatcattttctctct 28318071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 35193196 - 35193120
Alignment:
Q  167 attcaacatccactttttcaattctcaacactccatatcattttc--tctcttattcaacaatgattcaacttttac 241  Q
    ||||||||  |||||||||||||| |||||||||| || ||||||  ||| |||||||||| | |||||||||||||    
T  35193196 attcaacactcactttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttac 35193120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 37887843 - 37887891
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||| ||||||||||| |||||||||| |||||||| |||||    
T  37887843 ttcaacatccattttttcaattcccaacactccacatcattttatctct 37887891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 37951743 - 37951791
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| | ||||||||||||| |||||||||||||||||||| ||||    
T  37951743 ttcaacacctactttttcaattcccaacactccatatcattttccctct 37951791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 38970027 - 38970104
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttct----ctcttattcaacaatgattcaacttttac 241  Q
    ||||||| ||||||||||||||  |||||||||| |||||||| |    ||||||||||||| | |||||||||||||    
T  38970027 ttcaacacccactttttcaatttccaacactccacatcatttttttttcctcttattcaacactcattcaacttttac 38970104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 39769725 - 39769773
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||  |||||||||| ||||||||||||||    
T  39769725 ttcaacacccactttttcaatttccaacactccacatcattttctctct 39769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 45549695 - 45549647
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  45549695 ttcaacaaccactttttcaattcccaacactccacatcattttttctct 45549647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 47159570 - 47159523
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  47159570 ttcaacatccacttttt-aattcccaacactccacatcattttctctct 47159523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 33078860 - 33078813
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||| ||||||||||  | |||||||||||    
T  33078860 tcaacatccactttttcaattcccaacactccacgttattttctctct 33078813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 26812109 - 26812151
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcatttt 210  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||    
T  26812109 ttcaacacccattttttcaattcccaacactccatatcatttt 26812151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 32130345 - 32130299
Alignment:
Q  170 caacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||| ||||||||| ||||| |||||||||| ||||||||||||||    
T  32130345 caacacccacttttttaattcccaacactccacatcattttctctct 32130299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 35029187 - 35029137
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| | ||||||||||||| ||||| |||| ||||||||||||||    
T  35029187 cattcaacacctactttttcaattcccaacattccacatcattttctctct 35029137  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 48984902 - 48984978
Alignment:
Q  166 cattcaacatccactttttcaattctcaacactccatatcattt--tctctcttattcaacaatgattcaacttttac 241  Q
    ||||||||| ||||||||||||||  |||| ||||| |||||||  |||||||||||||||| | ||||||| |||||    
T  48984902 cattcaaca-ccactttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttac 48984978  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 32748793 - 32748841
Alignment:
Q  168 ttcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||| | ||||||||||| |||||||||| || |||||||||||    
T  32748793 ttcaacatctattttttcaattcccaacactccacattattttctctct 32748841  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 40302555 - 40302519
Alignment:
Q  180 tttttcaattctcaacactccatatcattttctctct 216  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  40302555 tttttcaattcccaacactccacatcattttctctct 40302519  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 57818 - 57771
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctctct 216  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  57818 tcaacacccactttttcaattcccaacactccacatcattttctctct 57771  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 66138 - 66100
Alignment:
Q  178 actttttcaattctcaacactccatatcattttctctct 216  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  66138 actttttcaattctcaacactccacatcattttctctct 66100  T

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Target: scaffold0362 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 5398 - 5353
Alignment:
Q  169 tcaacatccactttttcaattctcaacactccatatcattttctct 214  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||    
T  5398 tcaacacccactttttcaattcccaacactccacatcattttctct 5353  T

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