View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15786_low_1 (Length: 521)
Name: NF15786_low_1
Description: NF15786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15786_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 465; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 1 - 497
Target Start/End: Complemental strand, 48223166 - 48222670
Alignment:
| Q |
1 |
ttttgtcttcagtcacgtcgcggcttttgttgttacactacgttaataaaataaaataacaattatgaaaataaaatttaagtagattatcaatttatat |
100 |
Q |
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| T |
48223166 |
ttttgtcttcagtcacgtcgcggcttttgttgttacactacgttaataaaataaaataacaattaggaaaataaaatttaagtaaattatcaatttatat |
48223067 |
T |
|
| Q |
101 |
gaattgattgcttaacaacattatcccgtggcctctattataaatggttccttaggataagcatcaagctgataatagtattgcaatgggaaatgaaaca |
200 |
Q |
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| T |
48223066 |
gaattgattgcttaacaacattatcccgtggcctctattataaatggttccttaggataagcatcaagctgataatagtattgcaatgggaaatgaaaca |
48222967 |
T |
|
| Q |
201 |
cgtaggctttcaaattcaattatctttctcttaatttttcttactttggtttctagtacaaatggtggagacattgtggtttattggggtcaaaacgaga |
300 |
Q |
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| T |
48222966 |
cgtaggctttcaaattcaattatctttctcttaatttttcttactttggtttctagtacaaatggtggagacattgtggtttattggggtcaaaacgaga |
48222867 |
T |
|
| Q |
301 |
gagaaggttcattgaccgaaacatgtaacactggactatacgaaattgtgaatatagcatttctatcaatatttggtagtggtcgtaaacctcaactcaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48222866 |
gagaaggttcattgaccgaaacatgtaacactggactatacgaaattgtgaacatagcatttctatcaatatttggtagtggtcgtaaacctcaactcaa |
48222767 |
T |
|
| Q |
401 |
tctagcaggtcactgtgaccccaaatcaaacaatggttgcaagagtttgagcatagtcataaaaaagtgccaaaagaaaggcatcaaaaacatactt |
497 |
Q |
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|||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |
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| T |
48222766 |
tctagcaggtcactgtgatcccacatcaaacaatggttgcaagagtttgagcatagacataaaaaattgccaaaagaaaggcatcaaaatcatactt |
48222670 |
T |
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