View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15787_high_7 (Length: 261)

Name: NF15787_high_7
Description: NF15787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15787_high_7
NF15787_high_7
[»] chr8 (32 HSPs)
chr8 (17-249)||(5800880-5801112)
chr8 (184-236)||(6530807-6530859)
chr8 (182-249)||(16852338-16852405)
chr8 (178-236)||(26688859-26688917)
chr8 (184-249)||(968362-968427)
chr8 (183-236)||(8484998-8485051)
chr8 (184-236)||(6436579-6436631)
chr8 (183-235)||(22268958-22269010)
chr8 (186-236)||(2203494-2203544)
chr8 (186-236)||(3624582-3624632)
chr8 (183-249)||(4830486-4830552)
chr8 (182-236)||(19703511-19703565)
chr8 (183-236)||(28783059-28783112)
chr8 (184-236)||(6569795-6569847)
chr8 (184-236)||(20994482-20994534)
chr8 (184-236)||(23361673-23361725)
chr8 (184-236)||(29431011-29431063)
chr8 (185-249)||(29858060-29858124)
chr8 (184-236)||(30483908-30483960)
chr8 (182-249)||(5264542-5264609)
chr8 (184-231)||(18540298-18540345)
chr8 (182-249)||(35641912-35641979)
chr8 (187-248)||(11492085-11492146)
chr8 (183-236)||(11793545-11793598)
chr8 (183-236)||(28750570-28750622)
chr8 (183-236)||(44780138-44780191)
chr8 (181-217)||(3826820-3826856)
chr8 (184-220)||(23874422-23874458)
chr8 (184-236)||(32157191-32157243)
chr8 (184-236)||(35287716-35287768)
chr8 (184-236)||(40591732-40591784)
chr8 (184-236)||(43969022-43969074)
[»] chr4 (26 HSPs)
chr4 (183-237)||(51250545-51250599)
chr4 (184-236)||(9241049-9241101)
chr4 (183-233)||(27965537-27965587)
chr4 (184-249)||(19238588-19238653)
chr4 (183-236)||(29195094-29195147)
chr4 (184-249)||(55427211-55427276)
chr4 (188-236)||(4911256-4911304)
chr4 (184-236)||(37109375-37109427)
chr4 (183-233)||(37720241-37720291)
chr4 (184-233)||(51948480-51948529)
chr4 (184-236)||(28635696-28635748)
chr4 (184-236)||(37443702-37443754)
chr4 (182-236)||(21344815-21344869)
chr4 (181-235)||(21660169-21660223)
chr4 (181-235)||(21668933-21668987)
chr4 (183-236)||(7949478-7949531)
chr4 (182-235)||(19680813-19680866)
chr4 (187-236)||(39030137-39030186)
chr4 (184-249)||(39509070-39509135)
chr4 (184-249)||(47044717-47044782)
chr4 (184-236)||(1730513-1730565)
chr4 (188-236)||(37980171-37980219)
chr4 (184-236)||(38206149-38206201)
chr4 (184-236)||(42281257-42281309)
chr4 (184-236)||(46545711-46545763)
chr4 (184-236)||(56409951-56410003)
[»] chr1 (32 HSPs)
chr1 (184-236)||(19528351-19528403)
chr1 (175-249)||(40257390-40257464)
chr1 (184-229)||(37310007-37310052)
chr1 (183-236)||(41508830-41508883)
chr1 (179-236)||(46146291-46146348)
chr1 (184-236)||(9165219-9165271)
chr1 (184-236)||(15581165-15581217)
chr1 (186-236)||(33700797-33700847)
chr1 (183-236)||(8177206-8177259)
chr1 (183-236)||(36371469-36371522)
chr1 (183-236)||(37046984-37047037)
chr1 (184-236)||(19940896-19940948)
chr1 (184-236)||(31794288-31794340)
chr1 (184-236)||(44961765-44961817)
chr1 (184-236)||(52116805-52116857)
chr1 (181-236)||(4566545-4566600)
chr1 (185-236)||(44126396-44126447)
chr1 (182-236)||(39714802-39714856)
chr1 (179-236)||(4824966-4825023)
chr1 (183-236)||(5711465-5711518)
chr1 (184-249)||(12259260-12259325)
chr1 (187-236)||(15786344-15786393)
chr1 (187-236)||(24730387-24730436)
chr1 (187-236)||(26232410-26232459)
chr1 (183-236)||(51814493-51814546)
chr1 (195-236)||(52336798-52336839)
chr1 (184-236)||(11068867-11068919)
chr1 (184-232)||(16170006-16170054)
chr1 (184-236)||(21694446-21694498)
chr1 (184-236)||(30420310-30420362)
chr1 (183-235)||(39012290-39012342)
chr1 (184-236)||(51703779-51703831)
[»] chr7 (42 HSPs)
chr7 (185-234)||(22927477-22927526)
chr7 (184-236)||(48771938-48771990)
chr7 (183-249)||(45709719-45709785)
chr7 (184-236)||(15137553-15137605)
chr7 (184-236)||(25021359-25021411)
chr7 (184-236)||(26459434-26459486)
chr7 (184-235)||(42836026-42836077)
chr7 (186-236)||(21854550-21854600)
chr7 (186-236)||(44628207-44628257)
chr7 (187-236)||(15905697-15905746)
chr7 (184-249)||(25590611-25590676)
chr7 (183-220)||(41487361-41487398)
chr7 (183-236)||(43215183-43215236)
chr7 (184-236)||(4161288-4161340)
chr7 (184-236)||(5273614-5273666)
chr7 (184-236)||(5579258-5579310)
chr7 (184-236)||(7801180-7801232)
chr7 (184-236)||(22760863-22760915)
chr7 (184-236)||(23301626-23301678)
chr7 (184-236)||(25956316-25956368)
chr7 (183-231)||(30579334-30579382)
chr7 (184-236)||(31835192-31835244)
chr7 (184-236)||(43590907-43590959)
chr7 (184-236)||(48039671-48039723)
chr7 (184-236)||(48125198-48125250)
chr7 (181-236)||(11720984-11721039)
chr7 (181-236)||(17041036-17041091)
chr7 (189-236)||(41519288-41519335)
chr7 (184-235)||(45559200-45559251)
chr7 (182-236)||(23595727-23595781)
chr7 (183-236)||(2446307-2446360)
chr7 (183-236)||(23552117-23552170)
chr7 (184-249)||(27776172-27776237)
chr7 (183-236)||(38374623-38374676)
chr7 (184-229)||(39631844-39631889)
chr7 (187-236)||(45976947-45976996)
chr7 (184-236)||(18363696-18363748)
chr7 (184-236)||(19553454-19553505)
chr7 (184-236)||(30442488-30442540)
chr7 (191-235)||(37085574-37085618)
chr7 (184-236)||(37233596-37233648)
chr7 (184-220)||(39499759-39499795)
[»] chr3 (39 HSPs)
chr3 (183-236)||(31520629-31520682)
chr3 (183-235)||(10499134-10499186)
chr3 (182-236)||(36720379-36720433)
chr3 (183-236)||(46518627-46518680)
chr3 (184-236)||(2597244-2597296)
chr3 (191-235)||(2667869-2667913)
chr3 (184-236)||(4222141-4222193)
chr3 (184-236)||(31788994-31789046)
chr3 (184-231)||(16991542-16991589)
chr3 (182-220)||(8051212-8051250)
chr3 (182-236)||(30311304-30311358)
chr3 (187-249)||(30510210-30510272)
chr3 (186-236)||(42799771-42799821)
chr3 (183-236)||(5499431-5499484)
chr3 (184-236)||(14339610-14339662)
chr3 (184-236)||(28703428-28703480)
chr3 (184-236)||(42430335-42430386)
chr3 (184-236)||(51903902-51903954)
chr3 (183-230)||(9832496-9832543)
chr3 (177-236)||(40268482-40268541)
chr3 (184-234)||(203090-203140)
chr3 (184-234)||(3054994-3055044)
chr3 (191-249)||(4844522-4844580)
chr3 (191-249)||(4870218-4870276)
chr3 (184-218)||(24459990-24460024)
chr3 (183-229)||(26871535-26871581)
chr3 (183-236)||(7975417-7975470)
chr3 (183-236)||(27093385-27093438)
chr3 (187-236)||(28928903-28928952)
chr3 (184-220)||(1360921-1360957)
chr3 (192-236)||(11612307-11612351)
chr3 (184-236)||(14186648-14186699)
chr3 (184-236)||(16354916-16354968)
chr3 (184-220)||(27923083-27923119)
chr3 (184-236)||(37788489-37788541)
chr3 (184-232)||(40286885-40286933)
chr3 (184-232)||(47079701-47079749)
chr3 (185-249)||(47454628-47454692)
chr3 (184-236)||(53863891-53863943)
[»] chr2 (24 HSPs)
chr2 (184-249)||(26545840-26545905)
chr2 (180-241)||(42602550-42602611)
chr2 (183-236)||(37480074-37480127)
chr2 (184-236)||(42327419-42327471)
chr2 (185-236)||(16918602-16918653)
chr2 (181-236)||(29503268-29503323)
chr2 (183-249)||(39714991-39715057)
chr2 (183-236)||(3001378-3001431)
chr2 (183-236)||(7799059-7799112)
chr2 (183-236)||(14500276-14500329)
chr2 (184-241)||(32106566-32106623)
chr2 (184-236)||(4439003-4439055)
chr2 (184-236)||(18825341-18825393)
chr2 (184-236)||(26482093-26482145)
chr2 (185-249)||(37755982-37756046)
chr2 (184-236)||(42922414-42922466)
chr2 (184-234)||(1435064-1435114)
chr2 (182-236)||(1729814-1729868)
chr2 (182-236)||(3697423-3697477)
chr2 (184-234)||(23052549-23052599)
chr2 (182-236)||(34041612-34041666)
chr2 (183-236)||(29197400-29197453)
chr2 (187-236)||(30359657-30359706)
chr2 (184-236)||(16381678-16381730)
[»] chr6 (15 HSPs)
chr6 (182-249)||(12234518-12234585)
chr6 (182-236)||(10338198-10338252)
chr6 (183-249)||(33549103-33549169)
chr6 (188-249)||(6776618-6776679)
chr6 (183-236)||(12188327-12188380)
chr6 (184-236)||(30127400-30127452)
chr6 (182-249)||(31623002-31623069)
chr6 (186-241)||(32613159-32613214)
chr6 (185-249)||(6758433-6758497)
chr6 (184-236)||(21418470-21418522)
chr6 (184-236)||(24641214-24641266)
chr6 (183-235)||(22696-22748)
chr6 (187-235)||(13441053-13441101)
chr6 (184-236)||(14557962-14558014)
chr6 (184-236)||(32201909-32201961)
[»] scaffold0258 (1 HSPs)
scaffold0258 (184-249)||(15334-15399)
[»] chr5 (22 HSPs)
chr5 (183-236)||(22020886-22020939)
chr5 (184-236)||(16457810-16457862)
chr5 (184-236)||(21549161-21549213)
chr5 (184-236)||(29075781-29075833)
chr5 (181-236)||(30109332-30109387)
chr5 (181-236)||(30883222-30883277)
chr5 (184-234)||(21589288-21589338)
chr5 (184-249)||(14495816-14495881)
chr5 (183-236)||(26598523-26598576)
chr5 (183-236)||(29692410-29692463)
chr5 (204-236)||(37258390-37258422)
chr5 (181-236)||(87447-87502)
chr5 (188-231)||(41430614-41430657)
chr5 (184-218)||(3915040-3915074)
chr5 (182-236)||(16436616-16436669)
chr5 (202-248)||(41165641-41165687)
chr5 (184-249)||(16773807-16773872)
chr5 (183-236)||(34984805-34984858)
chr5 (184-236)||(8278299-8278351)
chr5 (188-236)||(12883844-12883892)
chr5 (184-236)||(25627057-25627109)
chr5 (184-232)||(32670655-32670703)
[»] scaffold0299 (1 HSPs)
scaffold0299 (190-249)||(11534-11593)
[»] scaffold0070 (1 HSPs)
scaffold0070 (187-235)||(38927-38975)
[»] scaffold0032 (1 HSPs)
scaffold0032 (184-232)||(112282-112330)
[»] scaffold1367 (1 HSPs)
scaffold1367 (190-249)||(851-910)
[»] scaffold0417 (1 HSPs)
scaffold0417 (183-230)||(10218-10265)
[»] scaffold0021 (1 HSPs)
scaffold0021 (190-248)||(106054-106112)
[»] scaffold0172 (2 HSPs)
scaffold0172 (183-236)||(15801-15854)
scaffold0172 (183-236)||(32793-32846)
[»] scaffold0118 (1 HSPs)
scaffold0118 (184-249)||(41644-41709)
[»] scaffold0002 (1 HSPs)
scaffold0002 (187-236)||(94995-95044)
[»] scaffold0955 (1 HSPs)
scaffold0955 (187-235)||(3466-3514)
[»] scaffold0211 (1 HSPs)
scaffold0211 (184-236)||(24053-24105)
[»] scaffold0194 (1 HSPs)
scaffold0194 (188-236)||(13070-13118)


Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 5800880 - 5801112
Alignment:
Q  17 agataatccattccaattcaccctcttatctctcacattcacacctacttacctataattacgccaaatccaattatctttctaatatatgataagcatt 116  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5800880 agataatccattccaattcaccttcttatctctcacattcacacctacttacctataattacgccaaatccaattatctttctaatatatgataagcatt 5800979  T
Q  117 catgatctatgatacatacacttttaatcaataacttatttctgttaattaaagagtatcacacataaacccacttgggttggcctggtggtattagctt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5800980 catgatctatgatacatacacttttaatcaataacttatttctgttaattaaagagtatcacacataaacccacttgggttgacctggtggtattagctt 5801079  T
Q  217 gggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||||||||||||||||||    
T  5801080 gggatctaggagtgtgctccgtctcgacgtctc 5801112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 6530807 - 6530859
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  6530807 aacccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcc 6530859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 16852338 - 16852405
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||||||| |||||||| |||||||| || ||||||||||||  ||||| |||||    
T  16852338 taaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctc 16852405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 26688859 - 26688917
Alignment:
Q  178 cacataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| ||||||||||||||||||||||||| || |||||||| || ||||||||||||    
T  26688859 cacatcaacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcc 26688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 968362 - 968427
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||| ||||||||||||||||| |||||||| || ||||||||||||  ||||| |||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctc 968427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 8484998 - 8485051
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||||||| |||||||| ||  |||||||||||    
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcc 8485051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 6436631 - 6436579
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| |||||||||||| ||||||||  ||||||||||||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcc 6436579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 22269010 - 22268958
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    |||||||||||||||||||||||||| || |||||||| || |||||||||||    
T  22269010 aaacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctc 22268958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 2203494 - 2203544
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 2203544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 3624582 - 3624632
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 3624632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 4830486 - 4830552
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||||||| |||  ||||| |||||    
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctc 4830552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 19703565 - 19703511
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||| |||||||| |||||||| ||  |||||||||||    
T  19703565 taaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcc 19703511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 28783059 - 28783112
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| |||||||||| ||||| || || ||||||||||||    
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcc 28783112  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 6569847 - 6569795
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||| ||||||||| ||| |||| ||||||||||| ||||||||||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcc 6569795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 20994534 - 20994482
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| ||||||||  ||||||| || ||||||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcc 20994482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 23361725 - 23361673
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| ||||||||||||  |||||||| | ||||||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcc 23361673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 29431011 - 29431063
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||| |||||| ||||||||  | ||||||||||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcc 29431063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 29858124 - 29858060
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||| |||||||||||||||| |||||||| |  ||||||||||||  ||||| |||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctc 29858060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 30483960 - 30483908
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||  |||||||| ||||||||| | ||||||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcc 30483908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 5264542 - 5264609
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||||||| |||||||| |||||| | || ||| ||||||||  ||||| |||||    
T  5264542 taaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctc 5264609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 18540298 - 18540345
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgt 231  Q
    ||||||||||||||||||| |||||||| |||||||| || |||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgt 18540345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 35641979 - 35641912
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||| ||||||||||  ||||| ||| | ||||||||||||  ||||| |||||    
T  35641979 taaacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctc 35641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 11492146 - 11492085
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtct 248  Q
    |||||||||||||| ||  |||||| ||||| ||||| |||||||||||| |||||| ||||    
T  11492146 ccacttgggttggcatgtcggtattggcttgagatctgggagtgtgctccttctcgaggtct 11492085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 11793598 - 11793545
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| || ||||| || |||||||| || ||||||||||||    
T  11793598 aaacccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcc 11793545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 28750570 - 28750622
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||| |||||||||||||||||||| ||||| |||| |||||| |||||    
T  28750570 aaacccactggggttggcctggtggtatta-cttggaatctgggagtgcgctcc 28750622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 44780191 - 44780138
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||| |||| ||| ||||||||  | ||||||||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcc 44780138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 3826856 - 3826820
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttg 217  Q
    |||||||||||||||||||||| |||||||| |||||    
T  3826856 ataaacccacttgggttggcctagtggtattggcttg 3826820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 23874458 - 23874422
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttggga 220  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttggga 23874422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 32157191 - 32157243
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| |||||||||||||||||||||  ||||||| || ||||| ||||||    
T  32157191 aacccatttgggttggcctggtggtattgacttgggaccttggagtatgctcc 32157243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 35287716 - 35287768
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||| ||||||||||| || ||||| ||| | ||||||||||||    
T  35287716 aacccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcc 35287768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 40591732 - 40591784
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||| ||||||||||||||||| |||| |||  | ||||||||||||    
T  40591732 aacccacttgtgttggcctggtggtattggcttcggacttgggagtgtgctcc 40591784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 43969074 - 43969022
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| || ||||||| |||||||   ||||||||||||||    
T  43969074 aacccacttgggttggcatgatggtattggcttggggcttaggagtgtgctcc 43969022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 51250599 - 51250545
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccg 237  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccg 51250545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 9241101 - 9241049
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcc 9241049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 27965587 - 27965537
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgc 233  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  27965587 aaacccacttgggttggcctagtggtattggcttgggatctgggagtgtgc 27965537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 19238653 - 19238588
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||||||||||||| ||||||||  | ||||||||||||  ||||| |||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctc 19238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 29195094 - 29195147
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||| || |||||||| || ||||||||||||    
T  29195094 aaacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcc 29195147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 55427276 - 55427211
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||||||||||||| |||||||| || ||||| ||||||  ||||| |||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctc 55427211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 4911304 - 4911256
Alignment:
Q  188 cacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  4911304 cacttgggttggtctggtggtattagcttgggacttaggagtgtgctcc 4911256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 37109427 - 37109375
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 37109375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 37720291 - 37720241
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgc 233  Q
    |||||||||||||||||||||||| |||| |||||||| || |||||||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgggagtgtgc 37720241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 51948480 - 51948529
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgc 233  Q
    ||||||||||||||| |||||| |||||  ||||||||||||||||||||    
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgc 51948529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 28635696 - 28635748
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| |||||||||| |  |||||||||| ||||||||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcc 28635748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 37443702 - 37443754
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||||| ||||    
T  37443702 aacccacttgggttgacctagtggtattggcttgggatctgggagtgtactcc 37443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 21344815 - 21344869
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||| || | || |||||||| || ||||||||||||    
T  21344815 taaacccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcc 21344869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 21660223 - 21660169
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||| ||||||||||| |||||||||||  |||| ||||| |||||||||||    
T  21660223 ataaaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctc 21660169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 21668987 - 21668933
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||| ||||||||||| |||||||||||  |||| ||||| |||||||||||    
T  21668987 ataaaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctc 21668933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 7949531 - 7949478
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||| |||||| | |||||| |||||||| || ||||||||||||    
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcc 7949478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 19680866 - 19680813
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||| ||||||| |||||||| ||||||||  | |||||||||||    
T  19680866 taaacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctc 19680813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 39030186 - 39030137
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| |||||||||||||||| || |||||||| || ||||||||||||    
T  39030186 ccactggggttggcctggtggtgttggcttgggaccttggagtgtgctcc 39030137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 39509070 - 39509135
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||| ||  ||||| | ||||||||||| ||||||||||||  ||||| |||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctc 39509135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 47044717 - 47044782
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||| ||||||||||||||||  ||||||||||  |||| ||||||  ||||| |||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctc 47044782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 1730565 - 1730513
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| ||| |||||||| |||||||| ||  |||||||||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcc 1730513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 37980219 - 37980171
Alignment:
Q  188 cacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| | || |||||||| || ||||||||||||    
T  37980219 cacttgggttggcctggtgatgttggcttgggaccttggagtgtgctcc 37980171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 38206201 - 38206149
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| |||||||||  | |||||||| || ||||||||||||    
T  38206201 aacccacttgggttgacctggtggtgctggcttgggaccttggagtgtgctcc 38206149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 42281309 - 42281257
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| |||||| || |||||||| || | ||||||||||    
T  42281309 aacccacttgggttggccaggtggtgttggcttgggaccttgtagtgtgctcc 42281257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 46545711 - 46545763
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| ||||| || ||  |||||||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcc 46545763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 56409951 - 56410003
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||| |||||||||| | || |||||||| || ||||||||||||    
T  56409951 aacccacttgggctggcctggtgctgttggcttgggaccttggagtgtgctcc 56410003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19528403 - 19528351
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcc 19528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 40257390 - 40257464
Alignment:
Q  175 tcacacataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| || || ||||||||||||  ||||| |||||    
T  40257390 tcacaaataaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctc 40257464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 37310052 - 37310007
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagt 229  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||    
T  37310052 aacccacttgggttggcctggtggtattagcttcggatctgggagt 37310007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 41508830 - 41508883
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||||| | | ||||||||| ||||||||||||    
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcc 41508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 46146348 - 46146291
Alignment:
Q  179 acataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||| | | ||||||||||||||||||| ||| ||||||||    
T  46146348 acataaacccacttgggttggtccgatggtattagcttgggatctgggaatgtgctcc 46146291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 9165271 - 9165219
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 9165219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 15581217 - 15581165
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||    
T  15581217 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcc 15581165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 33700847 - 33700797
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| |||||||| |||||| |||| ||||||||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcc 33700797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 8177259 - 8177206
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||| ||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcc 8177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 36371469 - 36371522
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||| |||||||| |||||| | || ||||||||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcc 36371522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 37046984 - 37047037
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| |||||||| || |||||||| || ||||||||||||    
T  37046984 aaacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcc 37047037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19940948 - 19940896
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||| ||||||||||  || ||||||||||||    
T  19940948 aacccacttgggttggtctggtggtgttagcttgggtccttggagtgtgctcc 19940896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 31794340 - 31794288
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| ||||||||  | ||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcc 31794288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 44961765 - 44961817
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| | ||||||||||||||| ||| || |||||||||||    
T  44961765 aacccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcc 44961817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 52116857 - 52116805
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||||||||||||||| ||||||||  | ||||||||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcc 52116805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 4566545 - 4566600
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||| ||| |||| |||||| | || ||||||||||||    
T  4566545 ataaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcc 4566600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 44126396 - 44126447
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||||  | ||||| || ||||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcc 44126447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 39714856 - 39714802
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| | ||||  || ||||||||||| ||||||||||||    
T  39714856 taaacccacttgggttggcatagtggcgttggcttgggatcttggagtgtgctcc 39714802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 4824966 - 4825023
Alignment:
Q  179 acataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||| |||||||||||| ||| |||| || |||||||| || ||||||||||||    
T  4824966 acataaacacacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcc 4825023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 5711518 - 5711465
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||  ||||||||| ||||||||||| || ||||||| ||||    
T  5711518 aaacccacttgggttcacctggtggtgttagcttgggagcttggagtgtactcc 5711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 12259260 - 12259325
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||| | ||| ||||| |||||||| | ||||||||||||  ||||| |||||    
T  12259260 aacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctc 12259325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 15786393 - 15786344
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||| || || ||||| ||||||||||| ||||||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcc 15786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 24730387 - 24730436
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| ||||||||  |||| ||||| ||||||||||||    
T  24730387 ccacttgggttggcctagtggtattgtcttgagatctgggagtgtgctcc 24730436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 26232459 - 26232410
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||| || |||||||| ||||| ||||| ||||||||||||    
T  26232459 ccacttgggttggtctagtggtattggcttgagatctgggagtgtgctcc 26232410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 51814493 - 51814546
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||| |||||||  |||| |||||  |||||||||||    
T  51814493 aaacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcc 51814546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 52336839 - 52336798
Alignment:
Q  195 gttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||| |||||||| ||||||||||| ||||||||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcc 52336798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 11068919 - 11068867
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||  |||||||||||  ||||||||| |||||||||||||    
T  11068919 aacccatttgggttgatctggtggtattgacttgggatccaggagtgtgctcc 11068867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 16170054 - 16170006
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtg 232  Q
    |||||||||||||| |||||||||||||  ||||||| || ||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtg 16170006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 21694446 - 21694498
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| |||||||||||| ||||| ||  | ||||||||||||    
T  21694446 aacccacttgggttgacctggtggtattggcttgagacttgggagtgtgctcc 21694498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 30420310 - 30420362
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||| ||||||||  ||||| || ||||||||| ||||||||||||||    
T  30420310 aacccacttaggttggccaagtggttttggcttgggatataggagtgtgctcc 30420362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 39012290 - 39012342
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    |||||||||| ||||||||| ||||| || |||||||| || |||||||||||    
T  39012290 aaacccactttggttggcctagtggtgttggcttgggaccttggagtgtgctc 39012342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 51703779 - 51703831
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||| || |||||||| |||||| |||| ||||||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcc 51703831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 22927477 - 22927526
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgct 234  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtgct 22927526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 48771938 - 48771990
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcc 48771990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 45709785 - 45709719
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||| |||||||||||| ||||||||||||||||||||  |||||||||||  ||||| |||||    
T  45709785 aaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctc 45709719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 15137553 - 15137605
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcc 15137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 25021411 - 25021359
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 25021359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 26459486 - 26459434
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 26459434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 42836077 - 42836026
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||||||||| |||||||| |||||||| || |||||||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctc 42836026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 21854550 - 21854600
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcc 21854600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 44628257 - 44628207
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||| | ||||||||||| || ||||||||||||    
T  44628257 cccacttgggttggcctggtgttgttagcttgggaccttggagtgtgctcc 44628207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 15905746 - 15905697
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| |||||| |||||||| || ||||||||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcc 15905697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 25590611 - 25590676
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||| |||| ||||||| ||||| ||||| ||||||||||||  ||||| |||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctc 25590676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 41487361 - 41487398
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttggga 220  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  41487361 aaacccacttgggttggcctggtggtattggcttggga 41487398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 43215183 - 43215236
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| || |||||||| |||||||| || ||||||||||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcc 43215236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 4161288 - 4161340
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||| ||||||||||| ||||||||||| | ||||||||||    
T  4161288 aacccatttgggttggtctggtggtattggcttgggatcttgaagtgtgctcc 4161340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 5273666 - 5273614
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||| || |||||||| ||  |||||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcc 5273614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 5579310 - 5579258
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| ||||||||| || |||||||| || ||||||||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcc 5579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 7801180 - 7801232
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||| ||||||||||||||||  ||||||| || ||||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcc 7801232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 22760863 - 22760915
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||||||  ||||||| || ||||||||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcc 22760915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 23301678 - 23301626
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||||||  |||||||  | ||||||||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcc 23301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 25956368 - 25956316
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| |||||||||||| |||||||| |||||||| || ||||||||||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcc 25956316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 30579334 - 30579382
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgt 231  Q
    ||||||||||||||||||||||||||||| ||||| || || |||||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgt 30579382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 31835192 - 31835244
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||| || |||||||  || ||||||||||||    
T  31835192 aacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcc 31835244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 43590907 - 43590959
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||||||||||||||| ||||||||  | ||||||||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcc 43590959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 48039723 - 48039671
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||| || ||||| ||||| ||||| ||||||    
T  48039723 aacccacttgggttggcctggtggtgttggcttgcgatcttggagtatgctcc 48039671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 48125250 - 48125198
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||| || |||||||| || ||||||||||||    
T  48125250 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcc 48125198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 11721039 - 11720984
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||| |||| |||||||||||||||||| |||||||| || ||| ||||||||    
T  11721039 ataaaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcc 11720984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 17041091 - 17041036
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| || |||| ||| ||||||||||| | ||||||||||    
T  17041091 ataaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcc 17041036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 41519335 - 41519288
Alignment:
Q  189 acttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||| ||||||||  |||||||| ||||||||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcc 41519288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 45559200 - 45559251
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||||||||| |||||||| |||||| | || |||||||||||    
T  45559200 aacccacttgggttggcctagtggtattggcttggaaccttggagtgtgctc 45559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 23595727 - 23595781
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| |||||||||||| |||||||||||  |||| ||||| ||||||||||||    
T  23595727 taaactcacttgggttggtctggtggtattgacttgagatctcggagtgtgctcc 23595781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 2446307 - 2446360
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| ||| ||||||| ||||||||  | ||||||||||||    
T  2446307 aaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcc 2446360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 23552117 - 23552170
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||| ||| ||||  ||||||| || ||||||||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcc 23552170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 27776172 - 27776237
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||||||||||||  ||||||||  |  |||||||||||  ||||| |||||    
T  27776172 aacccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctcctcctcgaagtctc 27776237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 38374676 - 38374623
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| ||||||| || |||||||| ||  |||||||||||    
T  38374676 aaacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcc 38374623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 39631844 - 39631889
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagt 229  Q
    ||||||||||||||||||| |||||||| |||||||| || |||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagt 39631889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 45976996 - 45976947
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||| ||||| || || ||||||||||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcc 45976947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 18363696 - 18363748
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||  ||||| ||| | ||||||||||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcc 18363748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 19553454 - 19553505
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| |||||||||||||||||||||| |||| ||| || ||||||||||||    
T  19553454 aacccgcttgggttggcctggtggtattggctt-ggacctgggagtgtgctcc 19553505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 30442488 - 30442540
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||  |||||||| |||||||| || ||||| ||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcc 30442540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 37085618 - 37085574
Alignment:
Q  191 ttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    |||||||||| |||||||||| ||||||||| | |||||||||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctc 37085574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 37233648 - 37233596
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| | ||||| |||| ||||||||| | ||||||||||||    
T  37233648 aacccacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcc 37233596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 39499795 - 39499759
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttggga 220  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttggga 39499759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 31520682 - 31520629
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcc 31520629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 10499186 - 10499134
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  10499186 aaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctc 10499134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 36720379 - 36720433
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| ||||||||||| ||||||||| | ||||||||||||    
T  36720379 taaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcc 36720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 46518627 - 46518680
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||| ||||||||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcc 46518680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 2597296 - 2597244
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| ||||||||||| |||| |||| ||||||||||||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcc 2597244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 2667869 - 2667913
Alignment:
Q  191 ttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctc 2667913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 4222141 - 4222193
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| | |||||||| ||||||||||| ||||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcc 4222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 31789046 - 31788994
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcc 31788994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 16991542 - 16991589
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgt 231  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  16991542 aacccatttgggttggcctggtggtattggcttgggatctgggagtgt 16991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 8051212 - 8051250
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttggga 220  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8051212 taaacccacttgggttggcctggtggtattggcttggga 8051250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 30311304 - 30311358
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||| ||||||||||| |||||||  ||||||||||| ||||||||||||    
T  30311304 taaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcc 30311358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 30510272 - 30510210
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||| |||||||||| | |||||||| |||||||| |||||| |||||| |||||    
T  30510272 ccacttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggtctc 30510210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 42799821 - 42799771
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||| || |||||||| || ||||||||||||    
T  42799821 cccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcc 42799771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 5499484 - 5499431
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||||||  |||| |||||  |||||||||||    
T  5499484 aaacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcc 5499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 14339610 - 14339662
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| |||| |||||||||||||||| ||||||||| | ||||||||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcc 14339662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 28703480 - 28703428
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |  ||| |||||||||||||||| ||||||||||||    
T  28703480 aacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcc 28703428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 42430335 - 42430386
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  42430335 aacccacttgggttggc-tggtggtattgacttgggatcttggagtgtgctcc 42430386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 51903954 - 51903902
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||| ||||||| |||| ||||||| ||||||||||| ||||||||||||    
T  51903954 aacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcc 51903902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 9832496 - 9832543
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtg 230  Q
    ||||||||||||||||||| ||||||||| |||||||| || ||||||    
T  9832496 aaacccacttgggttggcccggtggtattggcttgggacctgggagtg 9832543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 40268482 - 40268541
Alignment:
Q  177 acacataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| ||||||||||||||| |||||||||| || |||||||| || |||||| |||||    
T  40268482 acacaaaaacccacttgggtttgcctggtggtgttggcttgggaccttggagtgggctcc 40268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 203090 - 203140
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgct 234  Q
    ||||||||||||||||||| ||||||||  |||||||||  ||||||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtgtgct 203140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 3054994 - 3055044
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgct 234  Q
    ||||||||||||||||||||||||| || |||||||| || |||| |||||    
T  3054994 aacccacttgggttggcctggtggtgttggcttgggaccttggagcgtgct 3055044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 4844580 - 4844522
Alignment:
Q  191 ttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||| |||||||||||  |||||||||| ||||||||||||  ||||| |||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctc 4844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 4870276 - 4870218
Alignment:
Q  191 ttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||| |||||||||||  |||||||||| ||||||||||||  ||||| |||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctc 4870218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 24459990 - 24460024
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgg 218  Q
    |||||||||||||||||||||||||||| ||||||    
T  24459990 aacccacttgggttggcctggtggtattggcttgg 24460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 26871581 - 26871535
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagt 229  Q
    |||||||||||||||||||||||||| || |||||||| || |||||    
T  26871581 aaacccacttgggttggcctggtggtgttggcttgggaccttggagt 26871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 7975417 - 7975470
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||| || ||||||||| |||||||  ||||||||||| ||||||||||||    
T  7975417 aaacccatttaggttggcctagtggtataggcttgggatctgggagtgtgctcc 7975470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 27093438 - 27093385
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||| |||||||| |||||| |  | ||||||||||||    
T  27093438 aaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcc 27093385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 28928952 - 28928903
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||| ||||||| |||||||| |||||||||||  |||||||||||    
T  28928952 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcc 28928903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 1360921 - 1360957
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttggga 220  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  1360921 aacccacttgggttggcctggtgttattggcttggga 1360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 11612307 - 11612351
Alignment:
Q  192 tgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||  ||||||| || ||||||||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcc 11612351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 14186648 - 14186699
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| ||||||||  ||||||| || ||||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcc 14186699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 16354968 - 16354916
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||| | ||  |||||||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcc 16354916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 27923119 - 27923083
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttggga 220  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  27923119 aacccacttaggttggcctggtggtattggcttggga 27923083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 37788541 - 37788489
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||  ||||||||  ||||| | |||||||||||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcc 37788489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 40286933 - 40286885
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtg 232  Q
    |||||||||||||||| |||||||| || ||||| ||||| ||||||||    
T  40286933 aacccacttgggttggtctggtggtgttcgcttgagatcttggagtgtg 40286885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 47079701 - 47079749
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtg 232  Q
    |||||||||||||||| |||||||| || ||||||||||| ||| ||||    
T  47079701 aacccacttgggttggtctggtggtgttggcttgggatcttggaatgtg 47079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 47454692 - 47454628
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||  || |||||||| ||||| ||||| ||||||||||||  ||||| |||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctc 47454628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 53863943 - 53863891
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||| ||||||| | || |||||||| || ||||||||||||    
T  53863943 aacccacttgggttgtcctggtgatgttggcttgggaccttggagtgtgctcc 53863891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 26545840 - 26545905
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||  |||||||||||||||||||||| | |||||||||| |||||| |||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtctc 26545905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 42602550 - 42602611
Alignment:
Q  180 cataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctc 241  Q
    ||||||||||||||||||||||| |||||||| |||||||| || |||||||||||| ||||    
T  42602550 cataaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctc 42602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 37480074 - 37480127
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||||||| |||||||| ||  |||||||||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcc 37480127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 42327471 - 42327419
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 42327419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 16918653 - 16918602
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| |||||||| | ||||||||| ||||||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcc 16918602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 29503268 - 29503323
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||| |||||||| | |||||| || ||||||||||||    
T  29503268 ataaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcc 29503323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 39714991 - 39715057
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||| ||||||||||  ||||||| || ||||||||||||  ||||| |||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctc 39715057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 3001378 - 3001431
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||| ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  3001378 aaactcacttgggttggcctagtggtattgacttgagatctaggagtgtgctcc 3001431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 7799112 - 7799059
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||||||| ||||||||  | ||||||||||||    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcc 7799059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 14500276 - 14500329
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||| ||||||| ||||||| |||||| ||||| ||||||||||||    
T  14500276 aaacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcc 14500329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 32106566 - 32106623
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctc 241  Q
    ||||||||||||||||||||||||| ||  ||||||| || |||||||||||| ||||    
T  32106566 aacccacttgggttggcctggtggtgttgacttgggaccttggagtgtgctccctctc 32106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 4439055 - 4439003
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||  |||||||| ||||||||||  |||||||||||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcc 4439003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 18825341 - 18825393
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||  ||||||||| || |||||||| |||||||||||||||    
T  18825341 aacccacttgggtttacctggtggtgttggcttgggacctaggagtgtgctcc 18825393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 26482093 - 26482145
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||| |||||||||| |||| || |||||||| |||||||||||||||    
T  26482093 aacccacttaggttggcctgatggtgttggcttgggacctaggagtgtgctcc 26482145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 37756046 - 37755982
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||| |||||||||| |||||||| || ||| ||||||||  ||||| |||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctc 37755982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 42922414 - 42922466
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||| | || ||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcc 42922466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 1435064 - 1435114
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgct 234  Q
    ||||||||||||||||| | |||||| | ||||||||| ||||||||||||    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgct 1435114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 1729814 - 1729868
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| || |||||||| ||||||||  | ||||||||||||    
T  1729814 taaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcc 1729868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 3697477 - 3697423
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| ||| ||||||| |||||||| || |||| |||||||    
T  3697477 taaacccacttgggttggtctgatggtattggcttgggaccttggagagtgctcc 3697423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 23052599 - 23052549
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgct 234  Q
    ||||||||| |||||||||||||||||| ||||||||  | ||||||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgct 23052549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 34041666 - 34041612
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||| ||||||||  ||| ||||||  |||||||||||    
T  34041666 taaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcc 34041612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 29197453 - 29197400
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||| ||||||||||  |||||||  | ||||||||||||    
T  29197453 aaacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcc 29197400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 30359657 - 30359706
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||| ||||||| || |||||||| || ||||||||||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcc 30359706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 16381730 - 16381678
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||  |||||||||||  |||||| ||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgggatctgagagtgttctcc 16381678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 12234585 - 12234518
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||| ||||||||||||||||||  ||||||| || |||||||||||| |||||| |||||    
T  12234585 taaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctc 12234518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 10338252 - 10338198
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| ||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  10338252 taaactcacttgggttggcatggtggtattggcttgggacctaggagtgtgctcc 10338198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 33549103 - 33549169
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||  ||||| |||||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctc 33549169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 6776679 - 6776618
Alignment:
Q  188 cacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||  ||||| |||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctc 6776618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 12188380 - 12188327
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 12188327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 30127400 - 30127452
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcc 30127452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 31623069 - 31623002
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||||| | ||||||||| |||||||| || ||||||||||||  ||||| |||||    
T  31623069 taaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctc 31623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 32613214 - 32613159
Alignment:
Q  186 cccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctc 241  Q
    ||||||||||||||||||||||||||  |||||| ||| |||||||||||| ||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctc 32613159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 6758497 - 6758433
Alignment:
Q  185 acccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||| ||||||||||||||||| |||| |||| | ||||||||||||  ||||| |||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctc 6758433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 21418470 - 21418522
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||||||||||||||| ||||||||  | ||||||||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcc 21418522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 24641266 - 24641214
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| |||||||||| ||||||||||  |||||||||| ||||||||||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtgtgctcc 24641214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 22748 - 22696
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||||||| || ||||| || |||||||| || |||||||||||    
T  22748 aaacccacttgggttgggctagtggttttggcttgggaccttggagtgtgctc 22696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 13441053 - 13441101
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||| | ||||||||| |||||||| || |||||||||||    
T  13441053 ccacttgggttggtcgggtggtattggcttgggacctgggagtgtgctc 13441101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 14557962 - 14558014
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||| || |||||||| || | ||||||||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcc 14558014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 32201961 - 32201909
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| |||||||| | |||||||||| |||||||||||  |||||||||||    
T  32201961 aacccatttgggttgacttggtggtattggcttgggatctcagagtgtgctcc 32201909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 15399 - 15334
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||||||||| ||||||||||| |||||||| || ||||||||||||  ||||| |||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctc 15334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 22020939 - 22020886
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||| ||||||||||| | |||||||||||||||||||| ||||||||||||    
T  22020939 aaaccctcttgggttggcatagtggtattagcttgggatctgggagtgtgctcc 22020886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 16457810 - 16457862
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||| |||||||||||||||||| |||||||| || ||||||||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcc 16457862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 21549213 - 21549161
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcc 21549161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 29075781 - 29075833
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||| |||| |||||||| ||||||||||| ||||||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcc 29075833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 30109387 - 30109332
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||| |||||||||| ||||| || || ||||||||||||    
T  30109387 ataaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcc 30109332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 30883277 - 30883222
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| || |||||||| |||||||| || ||||||||||||    
T  30883277 ataaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcc 30883222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 21589288 - 21589338
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgct 234  Q
    |||||||||||||||||||||||||||| |||||||| || ||||| ||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgct 21589338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 14495881 - 14495816
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||| ||||||||| |||||||||||  |||||||||| ||||||||||||  ||||| |||||    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctc 14495816  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 26598523 - 26598576
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||| ||||||| |||||||| |||||||||||  |||||||||||    
T  26598523 aaacccacttggattggcctagtggtattggcttgggatctgagagtgtgctcc 26598576  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 29692463 - 29692410
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||| ||||||||| ||||||||||| | ||||||||| ||||||||||||    
T  29692463 aaacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcc 29692410  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 37258422 - 37258390
Alignment:
Q  204 gtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||||||||||||||||    
T  37258422 gtggtattagcttgggatctaggagtgtgctcc 37258390  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 87502 - 87447
Alignment:
Q  181 ataaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||| ||||||||| ||||||||  ||||| |||| ||||||||||||    
T  87502 ataaacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcc 87447  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 41430657 - 41430614
Alignment:
Q  188 cacttgggttggcctggtggtattagcttgggatctaggagtgt 231  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||    
T  41430657 cacttgggttggtctggtggtattcgcttgggatataggagtgt 41430614  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 3915074 - 3915040
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgg 218  Q
    |||| ||||||||||||||||||||||||||||||    
T  3915074 aacctacttgggttggcctggtggtattagcttgg 3915040  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 16436616 - 16436669
Alignment:
Q  182 taaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| ||||||||||||||| |||||||| |||||||| || ||||||||||||    
T  16436616 taaactcacttgggttggcctagtggtattggcttggga-cttggagtgtgctcc 16436669  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 41165687 - 41165641
Alignment:
Q  202 tggtggtattagcttgggatctaggagtgtgctccgtctcgacgtct 248  Q
    ||||| |||||||||||||||| |||||||||||| |||||| ||||    
T  41165687 tggtgatattagcttgggatctgggagtgtgctccttctcgaagtct 41165641  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 16773807 - 16773872
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||||||| ||||| |||||||||||  ||||||| || ||||||||||||  ||||| |||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctc 16773872  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 34984805 - 34984858
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||| || |||||||| |||||| | || ||||||||||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcc 34984858  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 8278351 - 8278299
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| ||| ||||||| ||||||||  | ||||||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcc 8278299  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 12883844 - 12883892
Alignment:
Q  188 cacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||| ||| |||| ||||||||| ||||||||| ||||||||||||    
T  12883844 cacttggattgacctgatggtattaggttgggatctgggagtgtgctcc 12883892  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 25627057 - 25627109
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||| |||||||| |||||| |  | ||||||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcc 25627109  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 32670703 - 32670655
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtg 232  Q
    ||||||| |||||||||||||||||||| |||| |||| | ||||||||    
T  32670703 aacccacctgggttggcctggtggtattggcttaggattttggagtgtg 32670655  T

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Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 11534 - 11593
Alignment:
Q  190 cttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||  ||||| |||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctc 11593  T

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Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 38975 - 38927
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||| ||||||||||| |||||||| |||||||| |||||    
T  38975 ccacttgggttggtctggtggtattggcttgggacctaggagtatgctc 38927  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 112282 - 112330
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtg 232  Q
    |||||||||||||||||||||| ||||| |||||| |||| ||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtg 112330  T

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Target: scaffold1367 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 910 - 851
Alignment:
Q  190 cttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    |||||| ||||||||||||||| ||||||||||| ||| ||||||||  ||||| |||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctc 851  T

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Target: scaffold0417 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 10218 - 10265
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtg 230  Q
    ||||||||||||||||||||| || |||| ||||||||||| ||||||    
T  10218 aaacccacttgggttggcctgatgatattggcttgggatctgggagtg 10265  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 106054 - 106112
Alignment:
Q  190 cttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtct 248  Q
    ||||||||||| ||||||||||||||||||| |  |||||||||| | |||||| ||||    
T  106054 cttgggttggcgtggtggtattagcttgggaccagggagtgtgctgcttctcgaagtct 106112  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 15854 - 15801
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||  ||||||||||||||||| ||||||||| | ||||| ||||||    
T  15854 aaacccacttaagttggcctggtggtattggcttgggattttggagtatgctcc 15801  T

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Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 32846 - 32793
Alignment:
Q  183 aaacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||||||||||||||||||||||||||| |||  |||||| || ||| |||||    
T  32846 aaacccacttgggttggcctggtggtattggctgaggatctgggggtgcgctcc 32793  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 41709 - 41644
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctccgtctcgacgtctc 249  Q
    ||||||||||||||||||| |||||||| ||||| |||||  |||| ||||||  ||||| |||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctc 41644  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 95044 - 94995
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||| |||||||| |||||| | || ||||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcc 94995  T

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Target: scaffold0955 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 3466 - 3514
Alignment:
Q  187 ccacttgggttggcctggtggtattagcttgggatctaggagtgtgctc 235  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||| |||||    
T  3466 ccacttgggttggccgggtggtattggcttgggacctagaagtatgctc 3514  T

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Target: scaffold0211 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 24053 - 24105
Alignment:
Q  184 aacccacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    |||||||||||||||||||  |||||||  |||||||  ||||||||||||||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcc 24105  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 13118 - 13070
Alignment:
Q  188 cacttgggttggcctggtggtattagcttgggatctaggagtgtgctcc 236  Q
    ||||| ||||||| |||||||||| ||||| ||||| ||||||||||||    
T  13118 cacttcggttggcttggtggtattggcttgagatctgggagtgtgctcc 13070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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