View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15788_high_10 (Length: 375)

Name: NF15788_high_10
Description: NF15788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15788_high_10
NF15788_high_10
[»] chr7 (37 HSPs)
chr7 (1-359)||(18873169-18873527)
chr7 (1-244)||(15167984-15168227)
chr7 (9-359)||(14422802-14423151)
chr7 (1-243)||(10895795-10896037)
chr7 (1-252)||(12709839-12710090)
chr7 (1-252)||(13122910-13123161)
chr7 (9-244)||(16009395-16009628)
chr7 (8-252)||(13743526-13743768)
chr7 (38-252)||(12590639-12590851)
chr7 (134-252)||(13007374-13007491)
chr7 (79-244)||(16677180-16677347)
chr7 (79-244)||(17651416-17651583)
chr7 (287-359)||(19617457-19617528)
chr7 (274-359)||(14113417-14113500)
chr7 (287-356)||(4281212-4281281)
chr7 (192-244)||(11382874-11382926)
chr7 (192-244)||(11389351-11389403)
chr7 (192-244)||(20311055-20311107)
chr7 (192-244)||(21230963-21231015)
chr7 (312-355)||(11304303-11304346)
chr7 (312-355)||(23664018-23664061)
chr7 (312-355)||(29797665-29797708)
chr7 (312-355)||(29801484-29801527)
chr7 (184-347)||(13679485-13679646)
chr7 (287-347)||(36305145-36305203)
chr7 (307-358)||(19152935-19152985)
chr7 (307-358)||(20752334-20752384)
chr7 (307-358)||(41780943-41780993)
chr7 (193-244)||(2971254-2971305)
chr7 (193-244)||(11311059-11311110)
chr7 (193-244)||(20906465-20906516)
chr7 (191-242)||(46625961-46626012)
chr7 (287-347)||(13664946-13665005)
chr7 (212-252)||(831629-831669)
chr7 (212-252)||(1196809-1196849)
chr7 (287-338)||(11382780-11382831)
chr7 (212-252)||(34958578-34958618)
[»] chr5 (20 HSPs)
chr5 (1-358)||(22750950-22751307)
chr5 (9-355)||(28369946-28370291)
chr5 (9-355)||(19512204-19512549)
chr5 (9-252)||(38144532-38144773)
chr5 (38-257)||(23528478-23528695)
chr5 (183-359)||(23111088-23111264)
chr5 (287-355)||(22006782-22006849)
chr5 (183-244)||(18407947-18408008)
chr5 (192-244)||(22438751-22438803)
chr5 (312-359)||(22337647-22337694)
chr5 (312-359)||(22341185-22341232)
chr5 (307-363)||(23528758-23528814)
chr5 (312-355)||(9777219-9777262)
chr5 (287-355)||(37803967-37804034)
chr5 (317-359)||(38144424-38144466)
chr5 (222-355)||(41875486-41875620)
chr5 (193-244)||(19236900-19236951)
chr5 (307-358)||(21900899-21900949)
chr5 (195-244)||(22461158-22461207)
chr5 (195-244)||(22467782-22467831)
[»] scaffold0026 (5 HSPs)
scaffold0026 (1-252)||(11846-12097)
scaffold0026 (9-244)||(111504-111737)
scaffold0026 (307-348)||(121323-121364)
scaffold0026 (299-347)||(67298-67346)
scaffold0026 (307-358)||(143750-143800)
[»] chr3 (36 HSPs)
chr3 (1-244)||(14762761-14763004)
chr3 (1-244)||(38310803-38311046)
chr3 (15-244)||(20247792-20248021)
chr3 (9-355)||(9534146-9534491)
chr3 (8-244)||(24192771-24193008)
chr3 (9-244)||(23370509-23370743)
chr3 (12-244)||(55499105-55499337)
chr3 (134-244)||(24933832-24933941)
chr3 (166-252)||(41455093-41455178)
chr3 (108-252)||(16801463-16801606)
chr3 (183-355)||(17240407-17240577)
chr3 (287-359)||(8579134-8579206)
chr3 (287-359)||(14085693-14085764)
chr3 (287-359)||(49400693-49400764)
chr3 (287-359)||(14091094-14091165)
chr3 (186-347)||(18929239-18929398)
chr3 (312-359)||(16801147-16801194)
chr3 (312-359)||(20247678-20247725)
chr3 (312-363)||(38310685-38310736)
chr3 (312-355)||(54521876-54521919)
chr3 (287-347)||(31689679-31689737)
chr3 (287-347)||(31944489-31944547)
chr3 (317-355)||(24193082-24193120)
chr3 (193-244)||(13302244-13302295)
chr3 (193-244)||(13323791-13323842)
chr3 (307-355)||(14288082-14288129)
chr3 (193-244)||(12033448-12033499)
chr3 (193-244)||(13312900-13312951)
chr3 (193-244)||(17131732-17131783)
chr3 (307-358)||(35985770-35985820)
chr3 (193-244)||(51301589-51301640)
chr3 (134-244)||(10389447-10389557)
chr3 (134-244)||(10414536-10414646)
chr3 (134-244)||(10421206-10421316)
chr3 (307-347)||(12203360-12203401)
chr3 (191-244)||(16801027-16801080)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-252)||(988-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-252)||(49989-50238)
[»] chr6 (33 HSPs)
chr6 (14-244)||(23057760-23057990)
chr6 (9-359)||(23839016-23839365)
chr6 (1-252)||(29614142-29614393)
chr6 (9-244)||(10986184-10986418)
chr6 (9-252)||(18800255-18800497)
chr6 (12-244)||(4477678-4477909)
chr6 (115-252)||(930091-930227)
chr6 (9-244)||(21565215-21565449)
chr6 (134-252)||(12168305-12168422)
chr6 (134-252)||(19287214-19287331)
chr6 (134-252)||(19785865-19785982)
chr6 (134-252)||(19878398-19878515)
chr6 (134-252)||(19884174-19884291)
chr6 (165-244)||(34639990-34640069)
chr6 (191-355)||(25397172-25397336)
chr6 (165-244)||(34646664-34646743)
chr6 (134-244)||(25469708-25469816)
chr6 (287-359)||(9187589-9187660)
chr6 (312-359)||(2286656-2286703)
chr6 (220-355)||(12943152-12943288)
chr6 (307-359)||(23058057-23058109)
chr6 (312-355)||(29483324-29483367)
chr6 (307-348)||(8767115-8767156)
chr6 (307-348)||(14615340-14615381)
chr6 (192-240)||(24512851-24512899)
chr6 (195-244)||(9187498-9187547)
chr6 (191-244)||(25348486-25348539)
chr6 (191-244)||(25598643-25598696)
chr6 (326-359)||(933550-933583)
chr6 (191-244)||(2286770-2286823)
chr6 (307-347)||(18787161-18787202)
chr6 (191-244)||(19471338-19471391)
chr6 (183-244)||(31252413-31252474)
[»] scaffold0029 (1 HSPs)
scaffold0029 (28-252)||(111717-111942)
[»] chr4 (19 HSPs)
chr4 (1-252)||(8045828-8046078)
chr4 (1-252)||(11847916-11848173)
chr4 (287-358)||(16157883-16157953)
chr4 (192-359)||(18213768-18213935)
chr4 (134-244)||(53483646-53483756)
chr4 (312-359)||(2757449-2757496)
chr4 (192-244)||(15408139-15408191)
chr4 (312-355)||(15535235-15535278)
chr4 (312-355)||(49546840-49546883)
chr4 (307-347)||(14063796-14063836)
chr4 (191-244)||(8834895-8834948)
chr4 (191-244)||(13888641-13888694)
chr4 (193-244)||(14486661-14486712)
chr4 (191-242)||(22724691-22724742)
chr4 (191-244)||(15245215-15245268)
chr4 (191-242)||(15308120-15308171)
chr4 (193-242)||(27906266-27906315)
chr4 (326-363)||(43283939-43283976)
chr4 (212-252)||(15747552-15747592)
[»] chr1 (21 HSPs)
chr1 (9-359)||(20436913-20437261)
chr1 (183-359)||(32651563-32651738)
chr1 (134-252)||(41111977-41112094)
chr1 (287-359)||(21543218-21543289)
chr1 (183-348)||(18712790-18712954)
chr1 (192-355)||(19663410-19663572)
chr1 (307-359)||(42094850-42094902)
chr1 (307-358)||(20850115-20850166)
chr1 (192-347)||(11158093-11158246)
chr1 (307-348)||(29553504-29553545)
chr1 (191-244)||(10811786-10811839)
chr1 (191-244)||(20805320-20805373)
chr1 (307-347)||(19777713-19777753)
chr1 (287-347)||(21736197-21736256)
chr1 (307-358)||(5381715-5381765)
chr1 (193-244)||(20851136-20851187)
chr1 (193-244)||(20857763-20857814)
chr1 (193-244)||(21706276-21706327)
chr1 (193-244)||(21710818-21710869)
chr1 (329-359)||(16373102-16373132)
chr1 (307-347)||(11140164-11140205)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-252)||(746-997)
[»] chr2 (24 HSPs)
chr2 (9-355)||(6483536-6483882)
chr2 (9-355)||(6487003-6487349)
chr2 (9-244)||(19661457-19661690)
chr2 (79-252)||(26583715-26583886)
chr2 (9-244)||(23878826-23879059)
chr2 (9-244)||(23089058-23089292)
chr2 (9-244)||(23101466-23101700)
chr2 (287-359)||(6743190-6743261)
chr2 (287-359)||(43694562-43694633)
chr2 (183-348)||(23265133-23265298)
chr2 (183-348)||(23280201-23280366)
chr2 (192-360)||(9242961-9243129)
chr2 (134-244)||(5706027-5706137)
chr2 (186-244)||(21908353-21908411)
chr2 (312-355)||(10683828-10683871)
chr2 (312-355)||(20262273-20262316)
chr2 (287-336)||(201783-201831)
chr2 (307-348)||(24944419-24944460)
chr2 (287-347)||(21908453-21908512)
chr2 (191-244)||(24661576-24661629)
chr2 (311-358)||(20649170-20649217)
chr2 (193-244)||(10577-10628)
chr2 (193-244)||(25180933-25180984)
chr2 (144-244)||(26885133-26885233)
[»] scaffold0456 (4 HSPs)
scaffold0456 (165-359)||(8049-8243)
scaffold0456 (165-355)||(904-1094)
scaffold0456 (8-102)||(806-899)
scaffold0456 (8-102)||(7951-8044)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-252)||(1893-2143)
scaffold0117 (1-252)||(8570-8820)
[»] scaffold0025 (2 HSPs)
scaffold0025 (8-244)||(14399-14635)
scaffold0025 (317-355)||(14287-14325)
[»] chr8 (19 HSPs)
chr8 (9-244)||(44477441-44477674)
chr8 (9-244)||(44492599-44492832)
chr8 (1-244)||(8727736-8727979)
chr8 (1-252)||(23866423-23866674)
chr8 (191-359)||(18614271-18614437)
chr8 (183-359)||(23481941-23482117)
chr8 (9-156)||(27940946-27941091)
chr8 (134-244)||(17054533-17054642)
chr8 (287-359)||(23826302-23826373)
chr8 (287-347)||(21283095-21283153)
chr8 (316-359)||(8727623-8727666)
chr8 (191-244)||(39364919-39364972)
chr8 (307-347)||(21321078-21321118)
chr8 (307-347)||(21325676-21325716)
chr8 (193-244)||(29643389-29643440)
chr8 (192-244)||(14056567-14056619)
chr8 (192-244)||(25111976-25112028)
chr8 (193-244)||(24320674-24320725)
chr8 (191-244)||(21931696-21931749)
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-244)||(10199-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-244)||(1529-1763)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-252)||(11159-11401)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-252)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-252)||(17985-18229)
[»] scaffold0004 (1 HSPs)
scaffold0004 (183-359)||(116887-117062)
[»] scaffold0476 (1 HSPs)
scaffold0476 (9-244)||(3296-3531)
[»] scaffold0154 (2 HSPs)
scaffold0154 (108-252)||(30772-30917)
scaffold0154 (294-355)||(17479-17539)
[»] scaffold0077 (1 HSPs)
scaffold0077 (9-244)||(3625-3859)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-88)||(3471-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (134-252)||(1728-1845)
scaffold0796 (134-252)||(5751-5868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (183-355)||(13623-13793)
[»] scaffold0106 (1 HSPs)
scaffold0106 (287-359)||(39563-39634)
[»] scaffold0104 (2 HSPs)
scaffold0104 (287-359)||(12928-12999)
scaffold0104 (307-359)||(40694-40746)
[»] scaffold0076 (2 HSPs)
scaffold0076 (287-359)||(29089-29160)
scaffold0076 (287-359)||(34490-34561)
[»] scaffold0028 (3 HSPs)
scaffold0028 (287-359)||(45923-45994)
scaffold0028 (287-359)||(51327-51398)
scaffold0028 (195-343)||(69749-69896)
[»] scaffold0011 (1 HSPs)
scaffold0011 (287-359)||(173505-173576)
[»] scaffold0053 (1 HSPs)
scaffold0053 (214-355)||(78984-79125)
[»] scaffold0337 (1 HSPs)
scaffold0337 (192-359)||(8658-8825)
[»] scaffold0019 (3 HSPs)
scaffold0019 (274-363)||(34524-34611)
scaffold0019 (192-244)||(135473-135525)
scaffold0019 (307-358)||(13697-13747)
[»] scaffold0610 (1 HSPs)
scaffold0610 (233-348)||(6540-6653)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-348)||(101827-101992)
[»] scaffold0129 (1 HSPs)
scaffold0129 (136-244)||(45278-45386)
[»] scaffold0124 (1 HSPs)
scaffold0124 (192-355)||(34169-34331)
[»] scaffold0222 (1 HSPs)
scaffold0222 (183-348)||(16811-16975)
[»] scaffold0461 (1 HSPs)
scaffold0461 (183-244)||(11-72)
[»] scaffold0310 (1 HSPs)
scaffold0310 (192-244)||(17643-17695)
[»] scaffold0107 (2 HSPs)
scaffold0107 (192-244)||(40535-40587)
scaffold0107 (307-363)||(40426-40482)
[»] scaffold0139 (2 HSPs)
scaffold0139 (192-304)||(14940-15052)
scaffold0139 (307-355)||(1964-2012)
[»] scaffold0317 (1 HSPs)
scaffold0317 (184-347)||(1378-1539)
[»] scaffold0235 (1 HSPs)
scaffold0235 (194-244)||(22596-22646)
[»] scaffold0706 (1 HSPs)
scaffold0706 (307-348)||(2422-2463)
[»] scaffold0138 (1 HSPs)
scaffold0138 (191-244)||(12296-12349)
[»] scaffold0506 (1 HSPs)
scaffold0506 (307-347)||(9296-9336)
[»] scaffold0490 (1 HSPs)
scaffold0490 (307-358)||(5984-6034)
[»] scaffold0180 (1 HSPs)
scaffold0180 (307-358)||(13513-13563)
[»] scaffold0096 (2 HSPs)
scaffold0096 (191-244)||(39510-39563)
scaffold0096 (307-347)||(3952-3993)
[»] scaffold0015 (1 HSPs)
scaffold0015 (307-348)||(170868-170909)
[»] scaffold0815 (1 HSPs)
scaffold0815 (196-244)||(1453-1501)
[»] scaffold0266 (2 HSPs)
scaffold0266 (307-359)||(24083-24134)
scaffold0266 (307-359)||(13528-13579)
[»] scaffold1318 (1 HSPs)
scaffold1318 (193-244)||(1916-1967)
[»] scaffold0583 (1 HSPs)
scaffold0583 (307-358)||(5513-5563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (193-244)||(9336-9387)
[»] scaffold0309 (1 HSPs)
scaffold0309 (307-358)||(9239-9289)
[»] scaffold0127 (1 HSPs)
scaffold0127 (193-244)||(10239-10290)
[»] scaffold0046 (1 HSPs)
scaffold0046 (307-358)||(71645-71695)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-244)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-244)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (159-252)||(680-774)
[»] scaffold0669 (1 HSPs)
scaffold0669 (307-359)||(796-848)
[»] scaffold0609 (1 HSPs)
scaffold0609 (183-244)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (191-244)||(2631-2684)
[»] scaffold0178 (1 HSPs)
scaffold0178 (307-359)||(26520-26572)
[»] scaffold0790 (1 HSPs)
scaffold0790 (322-358)||(5579-5615)
[»] scaffold0042 (1 HSPs)
scaffold0042 (311-355)||(53943-53986)


Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 18873169 - 18873527
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873169 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 18873268  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18873269 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 18873368  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctctgactatacttgttcttctc 300  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18873369 gaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacggccggattctctgactatacttgttcttctc 18873468  T
Q  301 tccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873469 tccccctttttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 18873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 15167984 - 15168227
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15167984 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 15168083  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15168084 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 15168183  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  15168184 gaaattatagattatgattatcgagagatagtctcacccttacc 15168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 359
Target Start/End: Original strand, 14422802 - 14423151
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| | |||||||||||||||||| ||||||| |||||||  ||||    
T  14422802 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  14422901 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcacaacgaccagattctctgactatacttgttcttctctcccc 305  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    ||| |||  |||||| | | ||||||||||||  ||||||||||| | |||     
T  14423000 tagattatgattattgagagatagtctcacccttaccttagtttagatgaacaaaaacacaacaatcggattctctgactccacttgttcttcccaccc- 14423098  T
Q  306 gttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14423099 -ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 14423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 10896037 - 10895795
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10896037 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 10895938  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttc 199  Q
    ||| ||||||||| ||||| ||||| |||||| ||||||||||||| |||||||||||| |||||||| |||| ||||||| ||||||||||||||||||    
T  10895937 aagagaattaacatgatcaataccc-attcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttc 10895839  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttac 243  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  10895838 aaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12710090 - 12709839
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaa-tcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  12710090 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 12709992  T
Q  100 caagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 198  Q
    |||   ||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  12709991 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 12709893  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  12709892 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 12709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 13123161 - 13122910
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaa-tcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| |||||| ||||||||||  ||||||||||||||||||    
T  13123161 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 13123063  T
Q  100 caagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 198  Q
    |||   ||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  13123062 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 13122964  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13122963 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 16009395 - 16009628
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  16009395 ttcatcaattcatccaatcaatcataa-tttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||| |||||| |||||||| ||||||||| | |||||||||||||||||||||||||||    
T  16009494 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  209 agattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacc 16009628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 13743526 - 13743768
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaa 107  Q
    ||||||||||| |||||| ||  ||||| |||||| ||||||||||||||||||  |||| ||||||||| |||| ||||||||  ||| ||||||  ||    
T  13743526 attcatcaatttatccaaccaagcataa-tttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  108 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaatta 207  Q
    |||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    || |||||||||||||||||||||||||||||||||| |||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagtttt 13743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 12590851 - 12590639
Alignment:
Q  38 ttcaatcaatttatg-atcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttca 136  Q
    ||||||||||| ||| || |||||| |||||  ||||||| ||||||||| ||||||| ||| ||||  || |||||  ||| |||| || |  || |||    
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatca 12590754  T
Q  137 gaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    |||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12590753 gaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 12590655  T
Q  237 cccttaccatagtttt 252  Q
    |||||||| |||||||    
T  12590654 cccttaccttagtttt 12590639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 13007374 - 13007491
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 13007472  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  13007473 tcacccttaccttagtttt 13007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 16677180 - 16677347
Alignment:
Q  79 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaa 177  Q
    |||||||||||||| |  ||||||   | |||||| ||||||||| | || | | ||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  16677180 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 16677279  T
Q  178 -ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16677280 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 16677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 17651416 - 17651583
Alignment:
Q  79 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaa 177  Q
    |||||||||||||| |  ||||||   | |||||| ||||||||| | || | | ||| ||||||||| ||||||||||||| ||||| || ||||||||    
T  17651416 ttcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaa 17651515  T
Q  178 -ctaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
     ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17651516 actatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 17651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 19617457 - 19617528
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19617457 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 19617528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 14113417 - 14113500
Alignment:
Q  274 gattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||  ||||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14113417 gattctctgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 14113500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 4281212 - 4281281
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgt-aaaactgcttctg 356  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  4281212 tacttgttcttctctcccc-ttattcttggttttctctcccaaaacttgtttcacgtaaaaactgcttctg 4281281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 11382926 - 11382874
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacc 11382874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 11389403 - 11389351
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacc 11389351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 20311107 - 20311055
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttacc 20311055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 21231015 - 21230963
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 21230963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 11304303 - 11304346
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11304303 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 11304346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 23664061 - 23664018
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23664061 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 23664018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 29797665 - 29797708
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29797665 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 29797708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 29801484 - 29801527
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29801484 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 29801527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 13679485 - 13679646
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tg 282  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| |||| |||| |||  | | | |||  || ||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta-tttcagaa-aaacacacggcaatcggatgatcttg 13679582  T
Q  283 actatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaa 347  Q
     || |||||||||||||||  || | |||||||| |||||||||||||||||||||||||||||||    
T  13679583 gctctacttgttcttctct--ccttagttcttggtttttctctcccaaaacttgtttcacgtaaaa 13679646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 36305203 - 36305145
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    |||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||    
T  36305203 tacttgttcttctccccc--ttattcttggttttctctcccaaaacttgtttcacgtaaaa 36305145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 19152935 - 19152985
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  19152935 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 19152985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 20752334 - 20752384
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  20752334 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 20752384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 41780993 - 41780943
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  41780993 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 41780943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 2971254 - 2971305
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttacc 2971305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 11311059 - 11311110
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||| ||||||| || | ||| ||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacc 11311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 20906516 - 20906465
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 46625961 - 46626012
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    ||||||||| ||||||||| ||||| || |||||||| ||||||||||||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcaccctta 46626012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 13664946 - 13665005
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttct-ctcccaaaacttgtttcacgtaaaa 347  Q
    |||||||||||||||||   | |||||||||||| | |||||||||||||||||||||||||    
T  13664946 tacttgttcttctctcct--tagttcttggtttttttctcccaaaacttgtttcacgtaaaa 13665005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 831669 - 831629
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagtttt 831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 1196849 - 1196809
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagtttt 1196809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 11382831 - 11382780
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgttt 338  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||||||||||||    
T  11382831 tacttgttcttctctcccc-ttgctcttggttctcctctcccaaaacttgttt 11382780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 34958578 - 34958618
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagtttt 34958618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 22750950 - 22751307
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22750950 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 22751049  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22751050 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 22751149  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctctgactatacttgttcttctc 300  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22751150 gaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactatacttgttcttctc 22751249  T
Q  301 tccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  22751250 tcccccttgttattggttttctctcctaaaacttgtttcacgtaaaactgcttctgac 22751307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 9 - 355
Target Start/End: Complemental strand, 28370291 - 28369946
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  28370291 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28370192 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  209 agattatgattattgagagatagtctcacccttaccatagttttagaag--aaacgcacaacgaccagattctc-tgactatacttgttcttctctcccc 305  Q
    |||||||||||||||||||||||||||||||||||| ||  || |||||  ||| ||||||||| ||||||| | || || |||||| |||||||||||     
T  28370093 agattatgattattgagagatagtctcacccttacctta-attcagaagaaaaatgcacaacgatcagattcccttggctctacttgctcttctctccc- 28369996  T
Q  306 gttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
     |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  28369995 -ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 28369946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 355
Target Start/End: Original strand, 19512204 - 19512549
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  19512204 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  19512303 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctc-tgactatacttgttcttctctcccc 305  Q
    ||||||||||||||||||||||||||||||||||||| ||  || ||||| ||| ||||||||| ||||||| | || || |||||| |||||||||||     
T  19512402 tagattatgattattgagagatagtctcacccttacctta-attcagaagaaaatgcacaacgatcagattcccttggctctacttgctcttctctccc- 19512499  T
Q  306 gttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
     |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19512500 -ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 19512549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 38144773 - 38144532
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  38144773 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  38144674 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  209 agattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagtttt 38144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 23528478 - 23528695
Alignment:
Q  38 ttcaatcaatttatg-atcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttca 136  Q
    ||||||||||| ||| || |||||| |||||  ||||||| |||| |||| ||||||| ||| ||||  || |||||  ||| |||| || |  || |||    
T  23528478 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatca 23528575  T
Q  137 gaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    |||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23528576 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 23528674  T
Q  237 cccttaccatagttttagaag 257  Q
    |||||||| ||||||||||||    
T  23528675 cccttaccttagttttagaag 23528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 359
Target Start/End: Complemental strand, 23111264 - 23111088
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctc 280  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | |||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23111165  T
Q  281 tgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||  ||||||||||| | |||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23111164 tgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaccttgtttcacgtaaaactgcttctgacc 23111088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 22006849 - 22006782
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22006849 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgttttacgtaaaactgcttct 22006782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 18408008 - 18407947
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacc 18407947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 22438803 - 22438751
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttacc 22438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 22337647 - 22337694
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22337647 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 22337694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 22341185 - 22341232
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22341185 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 22341232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 23528758 - 23528814
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacccttt 363  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  23528758 ttgttcttggttttctctcctaaaactggtttcacgtaaaactgcttctgactcttt 23528814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 9777219 - 9777262
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9777219 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 9777262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 37804034 - 37803967
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggtttt-ctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||| |||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  37804034 tacttgctcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 37803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 38144466 - 38144424
Alignment:
Q  317 ttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  38144466 ttttctctcccaaaacttgtttcacgtaaaactgcttttgacc 38144424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 355
Target Start/End: Complemental strand, 41875620 - 41875486
Alignment:
Q  222 tgagagatagtctcacccttaccatagttttagaagaaac--gcacaacgaccagattctct-gactatacttgttcttctctccccgttgttcttggtt 318  Q
    ||||||| ||||||||||||||| || ||  ||||||||   ||||||||| | ||||| || | || |||||| |||||||||||  |||| |||||||    
T  41875620 tgagagagagtctcacccttaccttaattc-agaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctccc--ttgtccttggtt 41875524  T
Q  319 tt-ctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    || ||||||||||||||||||||||| ||||| |||||    
T  41875523 tttctctcccaaaacttgtttcacgtgaaacttcttct 41875486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 19236900 - 19236951
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 19236951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 21900949 - 21900899
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  21900949 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactacttctgac 21900899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 22461158 - 22461207
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttacc 22461207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 22467782 - 22467831
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttacc 22467831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 208; Significance: 1e-114; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12097 - 11846
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  12097 tacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattac 11998  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  11997 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttca 11898  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11897 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 111504 - 111737
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  111504 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  111603 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  209 agattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttacc 111737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 121364 - 121323
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  121364 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 67298 - 67346
Alignment:
Q  299 tctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  67298 tctcccccttgttcttggttttctcccccaaaacttgtttcacgtaaaa 67346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 143750 - 143800
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| | || ||||||||||||||    
T  143750 ttgttcttggtttt-tctcccaaaacttgttttatgtgaaactgcttctgac 143800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14763004 - 14762761
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14763004 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 14762905  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14762904 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 14762805  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  14762804 gaaattatagattatgattatcgagagatagtctcacccttacc 14762761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 38311046 - 38310803
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38311046 tacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 38310947  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  38310946 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattca 38310847  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  38310846 gaaattatagattatgattatcgagagatagtctcacccttacc 38310803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 20248021 - 20247792
Alignment:
Q  15 aattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacac 114  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  115 gatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatta 214  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  215 tgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacc 20247792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 9 - 355
Target Start/End: Original strand, 9534146 - 9534491
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||  || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  9534146 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9534245 taacatgatcaataccca-ttccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  209 agattatgattattgagagatagtctcacccttaccatagttttagaag--aaacgcacaacgaccagattctc-tgactatacttgttcttctctcccc 305  Q
    |||||||||||||||||||||||||||||||||||| ||  || |||||  ||| ||||||||| | ||||| | || || |||||| |||||||||||     
T  9534344 agattatgattattgagagatagtctcacccttacctta-attcagaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctccc- 9534441  T
Q  306 gttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
     |||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  9534442 -ttgtccttggtttttccctcccaaaacttgtttcacgtaaaactgcttct 9534491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 24192771 - 24193008
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgat-cacagcagcaacaaagattaagttttcattctgaacattatattacaaggga 106  Q
    ||||||||||| ||||||||| |||||  ||||||||| |||||||| ||||||| || || |||||||||||||||||||||||| | |||||||  ||    
T  24192771 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  107 attaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttcagaaat 205  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  206 tatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacc 24193008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 23370743 - 23370509
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  23370743 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  23370644 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  208 tagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||||||||||| ||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttacc 23370509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 55499337 - 55499105
Alignment:
Q  12 atcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaa 111  Q
    ||||||||||||||||| | |||  ||||||||||||||||||||||||| |   | |||||||| |||||||| |||||| | |||||||   ||||||    
T  55499337 atcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  112 cacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatag 210  Q
    || |||||||||||| ||||| ||||||||||||| |||||||||||||||||||  |   |||   |||||| ||||||||||||| | ||||||| |     
T  55499238 catgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcagttaggtcaattttcccgaaattacat 55499140  T
Q  211 attat-gattattgagagatagtctcacccttacc 244  Q
    |||||  |||| |||||||||||||||||||||||    
T  55499139 attatctattaatgagagatagtctcacccttacc 55499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 24933941 - 24933832
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| |||||||||   |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24933941 tcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 24933843  T
Q  234 tcacccttacc 244  Q
    |||||||||||    
T  24933842 tcacccttacc 24933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 41455178 - 41455093
Alignment:
Q  166 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41455178 tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 41455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 16801606 - 16801463
Alignment:
Q  108 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaatt 206  Q
    |||||| ||||||||| | |||| | ||| ||||||||| || |||||||| ||||||| || ||| ||| ||||||||| |||||||||||||||||||    
T  16801606 ttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaatt 16801508  T
Q  207 atagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||| || ||||||||||||||||||||||||||||||| |||||||    
T  16801507 atatat-atgattattgagagatagtctcacccttaccttagtttt 16801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 355
Target Start/End: Complemental strand, 17240577 - 17240407
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct- 281  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||| || ||  |||| || ||||| ||   | | |  | |     
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttaccttaattc-agaa-aatcgcacgacacacggttgatatt 17240480  T
Q  282 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    | || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17240479 ggctctacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 17240407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 8579206 - 8579134
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8579206 tacttgttcttctctcccctttgttcttggttttctctcccaaaacttgtttgacgtaaaactgcttctgacc 8579134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 14085693 - 14085764
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14085693 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 14085764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 49400693 - 49400764
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49400693 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 49400764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 14091094 - 14091165
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14091094 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactacttctgacc 14091165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 347
Target Start/End: Original strand, 18929239 - 18929398
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tgac 284  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||  || |||| |||||||| ||   ||||   || || |    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta-attcagaa-aaacgcacgacagtcagacgatcttggc 18929336  T
Q  285 tatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaa 347  Q
    | ||||||||||||||||||  | |||||||||| || ||||||||||||||||||||||||||    
T  18929337 tctacttgttcttctctccc--tagttcttggttcttttctcccaaaacttgtttcacgtaaaa 18929398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 16801147 - 16801194
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16801147 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 16801194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 20247725 - 20247678
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247725 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 20247678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 38310736 - 38310685
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacccttt 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38310736 cttggttttctctcccaaaatttgtttcacgtaaaactgcttctgacccttt 38310685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 54521876 - 54521919
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54521876 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 54521919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 31689737 - 31689679
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  31689737 tacttgctcttctctccc--ttgttcttggttttctctcccaaaacttatttcacgtaaaa 31689679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 31944489 - 31944547
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  31944489 tacttgctcttctctccc--ttgttcttggttttctctcccaaaacttgtttcacctaaaa 31944547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 24193082 - 24193120
Alignment:
Q  317 ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24193082 ttttctctcccaaaacttgtttcacgtaaaactgcttct 24193120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13302295 - 13302244
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 13302244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13323842 - 13323791
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 13323791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 355
Target Start/End: Complemental strand, 14288129 - 14288082
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  14288129 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttct 14288082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 12033499 - 12033448
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 12033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13312951 - 13312900
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttacc 13312900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 17131732 - 17131783
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 17131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 35985770 - 35985820
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| |||||| |||||||    
T  35985770 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgtttctgac 35985820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 51301589 - 51301640
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttacc 51301640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 10389557 - 10389447
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  234 tcacccttacc 244  Q
     ||||||||||    
T  10389457 ccacccttacc 10389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 10414646 - 10414536
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  234 tcacccttacc 244  Q
     ||||||||||    
T  10414546 ccacccttacc 10414536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 10421316 - 10421206
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| |||||||||   |||  ||||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  234 tcacccttacc 244  Q
     ||||||||||    
T  10421216 ccacccttacc 10421206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 12203360 - 12203401
Alignment:
Q  307 ttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 347  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  12203360 ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 12203401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 16801027 - 16801080
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 16801080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 988 - 1237
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  988 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 1086  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  1087 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 1185  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1186 ggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 49989 - 50238
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  49989 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 50087  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| ||||||||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  50088 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 50186  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50187 ggaattatagattatgattattgagagatagtctcacccttaccttagtttt 50238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-103; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 23057760 - 23057990
Alignment:
Q  14 caattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaaca 113  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  114 cgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatt 213  Q
     |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  214 atgattattgagagatagtctcacccttacc 244  Q
    |||||||| ||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacc 23057990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 9 - 359
Target Start/End: Original strand, 23839016 - 23839365
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||||  ||||    
T  23839016 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaa-actaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcacaacgaccagattctctgactatacttgttcttctctcccc 305  Q
    ||||||||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | ||||||||||||  ||||||||||| | |||     
T  23839214 tagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccacttgttcttcccaccc- 23839312  T
Q  306 gttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
     ||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  23839313 -ttgttcttgattttctctcccaaaacatgtttcacgtaaaactgcttctgacc 23839365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 29614393 - 29614142
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||  | |||    
T  29614393 tacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacatt-caatac 29614295  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattta-ttttccaaaactaagcaattaggtcaattttc 199  Q
    ||| ||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||| || |||| |||||||||||||    
T  29614294 aagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttc 29614195  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29614194 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 29614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 10986418 - 10986184
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||||  ||||    
T  10986418 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||||||    
T  10986319 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  208 tagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttacc 10986184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 18800255 - 18800497
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| | |||  ||||||||||||| |||||||| || ||| | |||||||| ||||||| ||||||| | |||||||  ||||    
T  18800255 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatt-tattttccaaaactaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||||||| || |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18800354 taacatgatcattactca-ttccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 18800452  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  18800453 tagattatgattattgagagatagtctcacccttacattagtttt 18800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 4477678 - 4477909
Alignment:
Q  12 atcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaa 111  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||| || ||| | |||||||||||||||||| ||||||| |||||||  ||||||     
T  4477678 atcaaatcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  112 cacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaattatag 210  Q
    || ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  4477777 catgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  211 attatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacc 4477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 115 - 252
Target Start/End: Complemental strand, 930227 - 930091
Alignment:
Q  115 gatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagatta 214  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  930227 gatcattaccca-ttcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagatta 930129  T
Q  215 tgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||||||||||||||||||||||||||||| |||||||    
T  930128 tgattattgagagatagtctcacccttaccttagtttt 930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 21565449 - 21565215
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| | |||  ||||||||||||||||||||||||| ||  | |||||||| |||||||| |||| | | |||||||   |||    
T  21565449 ttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 21565351  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||||||||| |||||| | ||||||||||| |||||||||||||||||||  |   |||   ||||||||||||||||||||| |||||||     
T  21565350 taacatgatcattaccc-attccccttagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaa 21565252  T
Q  209 agattat-gattattgagagatagtctcacccttacc 244  Q
    | |||||  |||| |||||||||||||||||||||||    
T  21565251 atattatctattaatgagagatagtctcacccttacc 21565215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 12168305 - 12168422
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 12168403  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  12168404 tcacccttaccttagtttt 12168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 19287214 - 19287331
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19287312  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  19287313 tcacccttaccttagtttt 19287331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 19785982 - 19785865
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  ||| |||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtc 19785884  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  19785883 tcacccttaccttagtttt 19785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 19878398 - 19878515
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19878496  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  19878497 tcacccttaccttagtttt 19878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 19884174 - 19884291
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 19884272  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||| ||| |||||||    
T  19884273 tcaccctaaccttagtttt 19884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 34640069 - 34639990
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacc 34639990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 191 - 355
Target Start/End: Original strand, 25397172 - 25397336
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaa--cgcacaacgaccagattctctga-ctat 287  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||| || ||  ||||||||  |||||||||| | |||||| | | || |    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttaccttaattc-agaagaaaaacgcacaacgatcggattcttttagctct 25397270  T
Q  288 acttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||| |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25397271 acttgctcttctctcat--ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 25397336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 34646743 - 34646664
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttacc 34646664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 25469816 - 25469708
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||| ||||| |||||||||   |||  |||||||||||||| |  ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  234 tcacccttacc 244  Q
    |||||||||||    
T  25469718 tcacccttacc 25469708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 9187589 - 9187660
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9187589 tacttgttcttctctctcc-ttgttctttgttttctctcccaaaacttgtttcacgtaaaactgattctgacc 9187660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 2286703 - 2286656
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2286703 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 2286656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 355
Target Start/End: Original strand, 12943152 - 12943288
Alignment:
Q  220 attgagagatagtctcacccttaccatagttttagaagaaac--gcacaacgaccagattctct-gactatacttgttcttctctccccgttgttcttgg 316  Q
    ||||||||||||||||||||||||| || ||  ||||||||   ||||||||| | ||||| || | || |||||| |||||||||||  |||| |||||    
T  12943152 attgagagatagtctcacccttaccttaattc-agaagaaaaatgcacaacgatcggattcccttggctctacttgctcttctctccc--ttgtccttgg 12943248  T
Q  317 tttt-ctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  12943249 tttttctctcccaaaacttgttttacgtaaaactgcttct 12943288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 23058057 - 23058109
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  23058057 ttgttcttggttttctctcccaaaacttgtttcacataaaactgcttgtgacc 23058109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 29483367 - 29483324
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29483367 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 29483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 8767156 - 8767115
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8767156 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 8767115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 14615381 - 14615340
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14615381 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 14615340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 24512899 - 24512851
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcaccct 240  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccct 24512851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 9187498 - 9187547
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacc 9187547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 25348486 - 25348539
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacc 25348539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 25598643 - 25598696
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacc 25598696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 933583 - 933550
Alignment:
Q  326 ccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||| ||||||||||||||||||||    
T  933583 ccaaaacttgttttacgtaaaactgcttctgacc 933550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 2286823 - 2286770
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||| ||||| ||||  || |||||||| ||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacc 2286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 18787161 - 18787202
Alignment:
Q  307 ttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 347  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  18787161 ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 18787202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 19471391 - 19471338
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacc 19471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 31252413 - 31252474
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttacc 31252474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 28 - 252
Target Start/End: Original strand, 111717 - 111942
Alignment:
Q  28 attcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaattaacacgatcattacccaa 127  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||     
T  111717 attcatcaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccat 111816  T
Q  128 ttcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttcagaaattatagattatgattattgaga 226  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  111817 ttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgaga 111916  T
Q  227 gatagtctcacccttaccatagtttt 252  Q
    |||||||||||||||||| |||||||    
T  111917 gatagtctcacccttaccttagtttt 111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8046078 - 8045828
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  8046078 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattac 8045979  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttca 200  Q
    ||| |||||||||  ||| ||||||| |||||||||||||  || | ||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  8045978 aagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 8045880  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  8045879 gaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 8045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 11847916 - 11848173
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  11847916 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 11848015  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaa------tttattttccaaaactaagcaattaggtcaa 194  Q
    ||  | ||||||| |||||||||||| | | |||||||||| |||| ||||||||||||||||      || ||||| |||||||| || | ||||||||    
T  11848016 aaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaa 11848115  T
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11848116 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 11848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 16157883 - 16157953
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16157883 tacttgttcttctctccca-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 16157953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 359
Target Start/End: Original strand, 18213768 - 18213935
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctctgactatac 289  Q
    |||||||||||||| ||| ||||| || |||||  | ||| |||||||||||| || |||    ||| ||| ||||||| | | ||||||||||||  ||    
T  18213768 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccac 18213867  T
Q  290 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    | ||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18213868 tagttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 18213935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 53483646 - 53483756
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 232  Q
    ||||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagt 53483744  T
Q  233 ctcacccttacc 244  Q
    ||||||||||||    
T  53483745 ctcacccttacc 53483756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 2757449 - 2757496
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2757449 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 2757496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 15408139 - 15408191
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 15408191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 15535235 - 15535278
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15535235 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 15535278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 49546883 - 49546840
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49546883 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 49546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 14063796 - 14063836
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14063796 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 14063836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 8834895 - 8834948
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 8834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 13888641 - 13888694
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacc 13888694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 14486661 - 14486712
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacc 14486712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 15245215 - 15245268
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacc 15245268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 15308120 - 15308171
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcaccctta 15308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 27906266 - 27906315
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    ||||||||||||||||| |||||||| ||||| ||||| || ||||||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccaccctta 27906315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 43283976 - 43283939
Alignment:
Q  326 ccaaaacttgtttcacgtaaaactgcttctgacccttt 363  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  43283976 ccaaaacttgttttacgtaaaactgattctgacccttt 43283939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 15747592 - 15747552
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagtttt 15747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 9 - 359
Target Start/End: Complemental strand, 20437261 - 20436913
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||||   |||    
T  20437261 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  20437162 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcacaacgaccagattctctgactatacttgttcttctctcccc 305  Q
    ||||||||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | ||||||||||||  ||||||||||| | |||     
T  20437063 tagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccacttgttcttcccaccc- 20436965  T
Q  306 gttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
     ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  20436964 -ttgttcttgattttctctccc-aaacttgtttcacgtaaaactgcttatgacc 20436913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 359
Target Start/End: Original strand, 32651563 - 32651738
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctct 281  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||| | ||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 32651661  T
Q  282 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttg-tttcacgtaaaactgcttctgacc 359  Q
    ||||  |||||||||  |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32651662 gactccacttgttct--tctcaccattgttcttggttttctctcccaaaacttgttttcacgtaaaactgcttctgacc 32651738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 41111977 - 41112094
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtc 41112075  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  41112076 tcacccttaccttagtttt 41112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 21543218 - 21543289
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21543218 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 21543289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 348
Target Start/End: Original strand, 18712790 - 18712954
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-t 281  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| ||  || |||| || ||||| ||   | |||  || |    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta-attcagaa-aatcgcacgacacacggatgatctt 18712887  T
Q  282 gactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 348  Q
    | || ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  18712888 ggctctacttgttcttatctcccc-ttgttcttggttcttctctcccaaaacttgtttcacgtaaaac 18712954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 355
Target Start/End: Complemental strand, 19663572 - 19663410
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct-gactatact 290  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||| || ||| || | || ||||| ||   | | |  ||| | || ||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta-tttcagga-aatcgcacgacacacgggtgatcttggctctact 19663475  T
Q  291 tgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  19663474 tgttcttctctcccc-ttgttcttggttcttttctcccaaaacttgtttcacgtaaaactgcttct 19663410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 42094902 - 42094850
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42094902 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 42094850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 20850115 - 20850166
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  20850115 ttgttcttggttttctctcccaaaacttgttttacataaaactgcttctgac 20850166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 347
Target Start/End: Original strand, 11158093 - 11158246
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tgactatact 290  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||  || |||| ||||||||  | | | |||  || || || ||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta-attcagaa-aaacgcacggcaatcggatgatcttggctctact 11158190  T
Q  291 tgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaa 347  Q
     |||||||||||||  | |||||||| |||||||||||||||||||||||||||||||    
T  11158191 agttcttctctccc--tagttcttggtttttctctcccaaaacttgtttcacgtaaaa 11158246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 29553545 - 29553504
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29553545 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 29553504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 10811839 - 10811786
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacc 10811786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 20805320 - 20805373
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 20805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 19777753 - 19777713
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  19777753 ttgttcttggttttctctcccaaaactagtttcacgtaaaa 19777713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 21736197 - 21736256
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 347  Q
    |||||| |||||||||||  |||||||||||||||||||||||| ||| |||||||||||||    
T  21736197 tacttgctcttctctccc--ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 21736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 5381715 - 5381765
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  5381715 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttatgac 5381765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 20851187 - 20851136
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20851136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 20857814 - 20857763
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 20857763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 21706276 - 21706327
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 21706327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 21710818 - 21710869
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 21710869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 16373102 - 16373132
Alignment:
Q  329 aaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||||||||||||||||||||||||||||    
T  16373102 aaacttgtttcacgtaaaactgcttctgacc 16373132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 11140205 - 11140164
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttg-tttcacgtaaaa 347  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  11140205 ttgttcttggttttctctcccaaagcttgttttcacgtaaaa 11140164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 997 - 746
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||||| ||||||||||| || ||||||||||||||||    
T  997 tacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatattac 899  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttc 199  Q
    ||| | |||| || |||||||||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  898 aagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttc 799  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  798 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 9 - 355
Target Start/End: Original strand, 6483536 - 6483882
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  6483536 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6483635 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  209 agattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcacaacgaccagattctc-tgactatacttgttcttctctcccc 305  Q
    |||||||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | ||||| | || || |||||| |||||||||||     
T  6483734 agattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatccgattcccttggctctacttgctcttctctccc- 6483832  T
Q  306 gttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
     |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  6483833 -ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 6483882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 9 - 355
Target Start/End: Original strand, 6487003 - 6487349
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  6487003 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6487102 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  209 agattatgattattgagagatagtctcacccttaccatagttt--tagaagaaacgcacaacgaccagattctc-tgactatacttgttcttctctcccc 305  Q
    |||||||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | ||||| | || || |||||| |||||||||||     
T  6487201 agattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatccgattcccttggctctacttgctcttctctccc- 6487299  T
Q  306 gttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
     |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  6487300 -ttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttct 6487349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 19661690 - 19661457
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| | |||||||||||||||||| ||||||| |||||||  ||||    
T  19661690 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  19661591 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  209 agattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||| |||||| |||||||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacc 19661457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 252
Target Start/End: Original strand, 26583715 - 26583886
Alignment:
Q  79 ttcattctgaacattatattacaagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaac 178  Q
    |||||||||||||| |  ||||||   | |||||| |||||||||||  ||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  26583715 ttcattctgaacatcactttacaacatatttaacatgatcattaccct-ttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaac 26583813  T
Q  179 taagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26583814 tatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 26583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 23878826 - 23879059
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |  ||  |||||||||||||||||||||| || ||  | |||||||| ||||||||||||||| | |||||||   |||    
T  23878826 ttcatcaattcatccaatcaattctat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataat 23878924  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||||||||| |||||| ||||||||||||   ||||||||||||||||||| |   |||   ||||||||||||||||||||  ||||||||    
T  23878925 taacatgatcattaccccattcccctcagaatcatca-acaaccctaaccctcaatttaatcctcaaggttaagcaattaggtcaatttttcgaaattat 23879023  T
Q  209 agattatgattattgagagatagtctcacccttacc 244  Q
    | || || |||| |||||||||||||||||||||||    
T  23879024 atataattattaatgagagatagtctcacccttacc 23879059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 23089292 - 23089058
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| | |||  ||||||||||||||||||||||||| ||  | |||||||| |||||||| |||| | | |||||||   |||    
T  23089292 ttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 23089194  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||||||||| |||||| | ||||||||||| |||||||||||||||||||  |   |||   ||||||||||||||||||||| |||||||     
T  23089193 taacatgatcattaccc-attccccttagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaa 23089095  T
Q  209 agattat-gattattgagagatagtctcacccttacc 244  Q
    | |||||  |||| |||||||||||||||||||||||    
T  23089094 atattatctattaatgagagatagtctcacccttacc 23089058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 23101700 - 23101466
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    ||||| |||||||||||||| | |||  |||||||||||||||||||||| || ||  | |||||||| |||||||| |||| | | |||||||   |||    
T  23101700 ttcatgaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataat 23101602  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||  |   |||   ||| ||||||||||||||||| |||||||     
T  23101601 taacatgatcattaccc-attcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaaacaattaggtcaattttccgaaattac 23101503  T
Q  209 agattat-gattattgagagatagtctcacccttacc 244  Q
    | |||||  |||| |||||||||||||||||||||||    
T  23101502 atattatctattaatgagagatagtctcacccttacc 23101466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 6743261 - 6743190
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6743261 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 6743190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 43694562 - 43694633
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43694562 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 43694633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 348
Target Start/End: Original strand, 23265133 - 23265298
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaac-gacca--gattct 279  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||  || |  ||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacgaatgattct 23265230  T
Q  280 ctgactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 348  Q
     || || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  23265231 -tggctctacttgttcttctctcccc-ttgctcttggttcttctctcccaaaacttgtttcacgtaaaac 23265298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 348
Target Start/End: Original strand, 23280201 - 23280366
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaac-gacca--gattct 279  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||  || |  ||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacgaatgattct 23280298  T
Q  280 ctgactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 348  Q
     || || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  23280299 -tggctctacttgttcttctctcccc-ttgctcttggttcttctctcccaaaacttgtttcacgtaaaac 23280366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 360
Target Start/End: Original strand, 9242961 - 9243129
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctctgactatac 289  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||| || |||    ||| ||| ||||||| | | ||||| ||||||  ||    
T  9242961 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatttagatgaacaaaagcacaacaatcggattccctgactccac 9243060  T
Q  290 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgaccc 360  Q
    ||||||||| | |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9243061 ttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgaccc 9243129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 5706137 - 5706027
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 232  Q
    ||||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  233 ctcacccttacc 244  Q
    ||||||||||||    
T  5706038 ctcacccttacc 5706027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 21908353 - 21908411
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacc 21908411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 10683871 - 10683828
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10683871 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 10683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 20262273 - 20262316
Alignment:
Q  312 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20262273 cttggttttctctcccaaaacttgtttcacgtaaaactgcttct 20262316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 201783 - 201831
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgt 336  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  201783 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgt 201831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 24944419 - 24944460
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24944419 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 24944460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 21908453 - 21908512
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaa 347  Q
    ||||||||||||||||||  | |||||||||| || ||||||||||||||||||||||||||    
T  21908453 tacttgttcttctctccc--tagttcttggttcttttctcccaaaacttgtttcacgtaaaa 21908512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 24661576 - 24661629
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||| |||||||| || ||||| ||| ||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacc 24661629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 20649170 - 20649217
Alignment:
Q  311 tcttggttttctctcccaaaacttgttt-cacgtaaaactgcttctgac 358  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  20649170 tcttggtttt-tctcccaaaacttgttttcacgtaaaactgcttctgac 20649217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 10577 - 10628
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 10628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 25180984 - 25180933
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 25180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 26885133 - 26885233
Alignment:
Q  144 cattaaaccctaaccctcaatttattttccaa-aactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    ||||| |||||||  |||||||| || ||||| |||||  | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||    
T  26885133 cattataccctaattctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccaccctta 26885231  T
Q  243 cc 244  Q
    ||    
T  26885232 cc 26885233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 163; Significance: 6e-87; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 165 - 359
Target Start/End: Original strand, 8049 - 8243
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgca 264  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 8148  T
Q  265 caacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8149 caacgaccggattctctgactctacttgttcttctctcccccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 165 - 355
Target Start/End: Original strand, 904 - 1094
Alignment:
Q  165 ttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgca 264  Q
    |||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 1003  T
Q  265 caacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1004 caacgaccggattctctgactatacttgttcttctctcccccttgttcttggttttctctcccaaaacttgtttcacgtaaaactacttct 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 806 - 899
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaa 102  Q
    ||||||||||| ||||||||  |||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||    
T  806 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 7951 - 8044
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaa 102  Q
    ||||||||||| ||||||||  |||||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||||||    
T  7951 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 2143 - 1893
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttc 199  Q
    ||| |||||||||  |||||||||||  | || ||| ||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  2043 aagagaattaacataatcattaccca--ttccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 1946  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  1945 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8820 - 8570
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||| |||||| | || |||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaa-ttttc 199  Q
    ||| |||||||||  |||||||||||  | || ||| ||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  8720 aagagaattaacataatcattaccca--ttccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 8623  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  8622 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 14635 - 14399
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaa 107  Q
    ||||||||||| ||||||||| |||||  ||||||||| ||||||||||||||| || || ||||||||||||||||| |||||| | |||||||  |||    
T  14635 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  108 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttcagaaatt 206  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  207 atagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacc 14399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 14325 - 14287
Alignment:
Q  317 ttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14325 ttttctctcccaaaacttgtttcacgtaaaactgcttct 14287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 44477441 - 44477674
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  44477441 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44477540 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  209 agattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttacc 44477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 44492599 - 44492832
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| |||||||  ||||||  ||||    
T  44492599 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44492698 taacatgatcaataccca-ttcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  209 agattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttacc 44492832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 8727979 - 8727736
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||||||||||| |||||    
T  8727979 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 8727880  T
Q  101 aagggaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttcc-aaaactaagcaattaggtcaattttc 199  Q
    ||  ||||||||| ||||| ||||| || ||| ||||||||||| | ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  8727879 aacagaattaacatgatcaataccc-atacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttc 8727781  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  8727780 agaaattatagattatgattattgagggataatctcacccttacc 8727736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 23866423 - 23866674
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaa-tcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatatta 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||||| |||| |||||| ||||||||||  ||||||||||||||||||    
T  23866423 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatatta 23866521  T
Q  100 caagg-gaattaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaatttt 198  Q
    |||   ||||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  23866522 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 23866620  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  23866621 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 23866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 191 - 359
Target Start/End: Original strand, 18614271 - 18614437
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaa-cgcacaacgaccagattctctgactatac 289  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||| |||||||| ||||||| || | |||||||||||| |||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttaccttaattt-agaagaaaacgcacaatgatcggattctctgactctac 18614369  T
Q  290 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18614370 ttgttcttctcaccc--ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 18614437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 359
Target Start/End: Complemental strand, 23482117 - 23481941
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctc 280  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| || |||    ||| ||| ||||||| | | |||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctc 23482018  T
Q  281 tgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||  | ||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23482017 tgactccagttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 23481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| | || ||  | ||||||| |||||||||||||||||| |||||||  ||||    
T  27941091 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaa 156  Q
    ||||| ||||| ||||| |||||| ||||||||||||| |||||||||    
T  27940992 taacatgatcaataccc-attcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 17054533 - 17054642
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 17054631  T
Q  234 tcacccttacc 244  Q
    |||||||||||    
T  17054632 tcacccttacc 17054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 23826302 - 23826373
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23826302 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 23826373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 21283095 - 21283153
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  21283095 tacttgttcttctccccc--ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 21283153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 359
Target Start/End: Complemental strand, 8727666 - 8727623
Alignment:
Q  316 gttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8727666 gttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 8727623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 39364919 - 39364972
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacc 39364972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 21321118 - 21321078
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21321118 ttgttcttggttttctctcccaaaactggtttcacgtaaaa 21321078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 21325716 - 21325676
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21325716 ttgttcttggttttctctcccaaaactggtttcacgtaaaa 21325676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 29643440 - 29643389
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacc 29643389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 14056619 - 14056567
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttacc 14056567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 25111976 - 25112028
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttacc 25112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 24320725 - 24320674
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 24320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 21931696 - 21931749
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacc 21931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 10433 - 10199
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  10433 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  10334 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  208 tagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttacc 10199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 1763 - 1529
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| |||||||  ||||    
T  1763 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||| |||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  1664 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  208 tagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttacc 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 11159 - 11401
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| | |||  ||||||||||||| ||||||||||| ||  |  ||||||| ||||||| ||||||| | |||||||  ||||    
T  11159 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaat 11257  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatt-tattttccaaaactaagcaattaggtcaattttcagaaatta 207  Q
    ||||| ||||||||| || |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11258 taacatgatcattactca-ttccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 11356  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11357 tagattatgattattgagagatagtctcacccttaccttagtttt 11401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 109 - 350
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaa 107  Q
    ||||||||||| |||||| || |||||| |||||| ||||||||||||||| ||  |||| ||||||||| |||| ||||||||  ||| ||||||  ||    
T  109 attcatcaatttatccaaccaatcataa-tttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  108 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaatta 207  Q
    |||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  208 ttaacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  208 tagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagtttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 17985 - 18229
Alignment:
Q  8 attcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagg-ga 106  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||   ||    
T  17985 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  107 attaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaa-ctaagcaattaggtcaattttcagaaat 205  Q
    ||||||| || ||||||| | ||||| | ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  18084 attaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  206 tatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagtttt 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 183 - 359
Target Start/End: Original strand, 116887 - 117062
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctct 281  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||| | ||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 116985  T
Q  282 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttg-tttcacgtaaaactgcttctgacc 359  Q
    ||||  ||||||| ||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  116986 gactccacttgtttttctcaccc--ttgttcttggttttctctcccaaaacttgttttcacgtaaaactgcttctgacc 117062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 3531 - 3296
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| | |||  ||||||||||||| ||||||||||| ||  | |||||||| ||||||||||||||| | |||||||   |||    
T  3531 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaat 3433  T
Q  109 taacacga-tcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaatta 207  Q
    ||||| || ||||||||| |||||| ||||||||||||| |||||||||||||||||||  |  ||||   ||||||||||||||||||||| |||||||    
T  3432 taacatgattcattaccc-attcccctcagaatcatcatcaaaccctaaccctcaattttatccccaaggttaagcaattaggtcaattttccgaaatta 3334  T
Q  208 tagattat-gattattgagagatagtctcacccttacc 244  Q
     | |||||  |||| |||||||||||||||||||||||    
T  3333 catattatctattaatgagagatagtctcacccttacc 3296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 30772 - 30917
Alignment:
Q  108 ttaacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaattt-attttccaaaactaagcaattaggtcaattttcagaaatt 206  Q
    |||||| |||| |||| | |||||| ||| ||||||||| ||||||||| ||||||||| |  ||||||||||| |||||||||||||||||||||||||    
T  30772 ttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaatt 30871  T
Q  207 atagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  30872 atagattatgattattgagagatagtctcacccttaccttagtttt 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 17539 - 17479
Alignment:
Q  294 tcttctctccccgttgttcttggtttt-ctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  17539 tcttctctccc--ttgtccttggtttttctctcccaaaacttgtttcacgtaaaacttcttct 17479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 3859 - 3625
Alignment:
Q  9 ttcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagggaat 108  Q
    |||||||||||||||||||| | |||  |||||||||||||||||||||| || ||  | |||||||| |||||||| |||||| | |||||||   |||    
T  3859 ttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataat 3761  T
Q  109 taacacgatcattacccaattcccttcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattat 208  Q
    ||||| ||||||||||| || ||| ||||||||||||| |||||||||||||||||||  |   |||   ||||||||||||||||||||| |||||||     
T  3760 taacatgatcattaccc-atccccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattac 3662  T
Q  209 agattat-gattattgagagatagtctcacccttacc 244  Q
    | |||||  |||| |||||||||||||||||||||||    
T  3661 atattatctattaatgagagatagtctcacccttacc 3625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3471 - 3558
Alignment:
Q  1 tacacaaattcatcaattcatccaatcattcataaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctga 88  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3471 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

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Target: scaffold0796 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 1845 - 1728
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 1747  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  1746 tcacccttaccttagtttt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 5868 - 5751
Alignment:
Q  134 tcagaatcatcattaaaccctaaccctcaatttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 5770  T
Q  234 tcacccttaccatagtttt 252  Q
    ||||||||||| |||||||    
T  5769 tcacccttaccttagtttt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 355
Target Start/End: Original strand, 13623 - 13793
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct- 281  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||| || ||  |||| || ||||| ||   | | |  | |     
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttaccttaattc-agaa-aatcgcacgacacacggttgatatt 13720  T
Q  282 gactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    | || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13721 ggctctacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 13793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 39563 - 39634
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39563 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 39634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 12999 - 12928
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12999 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 12928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 40746 - 40694
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttc-acgtaaaactgcttctgacc 359  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  40746 ttgttcttggtttt-tctcccaaaacttgattgtacgtaaaactgcttctgacc 40694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 29160 - 29089
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29160 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 29089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 34561 - 34490
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34561 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 34490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 45994 - 45923
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45994 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 45923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 51398 - 51327
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51398 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 51327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 69749 - 69896
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaa-cgcacaacgaccagattctct-gactatacttg 292  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||| || ||| |||||||| ||| |||||| |  ||||||| | || ||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttaccttaattt-agaagaaaacgcgcaacgatcgaattctcttggctctacttg 69847  T
Q  293 ttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgt 343  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  69848 ttcttctctccc--ttgttcttggttttctctcccaaaacttgtttcacgt 69896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 173576 - 173505
Alignment:
Q  287 tacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  173576 tacttgttcttctctcccc-ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 214 - 355
Target Start/End: Complemental strand, 79125 - 78984
Alignment:
Q  214 atgattattgagagatagtctcacccttaccatagttttagaagaaa--cgcacaacgaccagattctct-gactatacttgttcttctctccccgttgt 310  Q
    ||||| |||||||| ||| |||||||||||| || ||| ||||||||  |||||||||| | |||||||| | || |||||| |||||||||||  ||||    
T  79125 atgatcattgagagttagcctcacccttaccttaattt-agaagaaaaacgcacaacgatcggattctctcggctctacttgctcttctctccc--ttgt 79029  T
Q  311 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  79028 tctttgttttctctcccaaaacttgtttcacgtaaaactgcttct 78984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 359
Target Start/End: Complemental strand, 8825 - 8658
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagtttta--gaagaaacgcacaacgaccagattctctgactatac 289  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||| || |||    ||| ||| ||||||| | ||||||||||||||  ||    
T  8825 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttaatttagatgaacaaaagcacaacaatcagattctctgactccac 8726  T
Q  290 ttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    ||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8725 ttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacc 8658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 34524 - 34611
Alignment:
Q  274 gattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacccttt 363  Q
    ||||||||||||  ||||||||||| | |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34524 gattctctgactccacttgttcttcccaccc--ttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgacccttt 34611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 135473 - 135525
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 135525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 13697 - 13747
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  13697 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 13747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 6540 - 6653
Alignment:
Q  233 ctcacccttaccatagttttagaagaaa-cgcacaacgaccagattctctgactatacttgttcttctctccccgttgttcttggttttctctcccaaaa 331  Q
    |||||||||||| || ||| |||||||| |||||||||| |  |||||||| || |||||||||||||| |||  |||||||||||||||||||||||||    
T  6540 ctcacccttaccttaattt-agaagaaaacgcacaacgatcgaattctctggctctacttgttcttctcaccc--ttgttcttggttttctctcccaaaa 6636  T
Q  332 cttgtttcacgtaaaac 348  Q
    |||||||||||||||||    
T  6637 cttgtttcacgtaaaac 6653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 348
Target Start/End: Complemental strand, 101992 - 101827
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgacca---gattct 279  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||   ||   ||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacaaatgattct 101895  T
Q  280 ctgactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 348  Q
     || || ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  101894 -tggctctacttgttcttctctcccc-ttgctcttggttcttctctcccaaaacttgtttcacgtaaaac 101827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 45386 - 45278
Alignment:
Q  136 agaatcatcattaaaccctaaccctca-atttattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 234  Q
    ||||||||||| |||||||||   ||| |||  ||||| |||||||  |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  235 cacccttacc 244  Q
    ||||||||||    
T  45287 cacccttacc 45278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 355
Target Start/End: Complemental strand, 34331 - 34169
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctct-gactatact 290  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||| || ||| || | || ||||| ||   | | |  ||| | || ||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta-tttcagga-aatcgcacgacacacgggtgatcttggctctact 34234  T
Q  291 tgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  34233 tgttcttctctcccc-ttgttcttggttcttttctcccaaaacttgtttcacgtaaaactgcttct 34169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 348
Target Start/End: Original strand, 16811 - 16975
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-t 281  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  || |||| || ||||| ||   | |||  || |    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-attcagaa-aatcgcacgacacacggatgatctt 16908  T
Q  282 gactatacttgttcttctctccccgttgttcttggtt-ttctctcccaaaacttgtttcacgtaaaac 348  Q
    | || ||||||||||| ||||||| |||||||||||| ||||||||||||||| |||| |||||||||    
T  16909 ggctctacttgttcttgtctcccc-ttgttcttggttcttctctcccaaaactcgttttacgtaaaac 16975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 72 - 11
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacc 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 17643 - 17695
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttacc 17695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 40587 - 40535
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttacc 40535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 40482 - 40426
Alignment:
Q  307 ttgttcttggttttctctc-ccaaaacttgtttcacgtaaaactgcttctgacccttt 363  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| | ||||| ||||    
T  40482 ttgttcttggttttc-ctctccaaaacttgtttcacgtaaaactgatgctgactcttt 40426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 304
Target Start/End: Complemental strand, 15052 - 14940
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaag-aaacgcacaacgaccagattctc-tgactatac 289  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||   ||||||| ||||||||||||| | ||||| | || || |||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta--attagaagaaaacgcacaacgatcggattcccttggctctac 14955  T
Q  290 ttgttcttctctccc 304  Q
    |||||||||||||||    
T  14954 ttgttcttctctccc 14940  T

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Target: scaffold0139; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 355
Target Start/End: Complemental strand, 2012 - 1964
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgttt-cacgtaaaactgcttct 355  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  2012 ttgttcttggtttt-tctcccaaaacttgtttgtacgtaaaactgcttct 1964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 1378 - 1539
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccatagttttagaagaaacgcacaacgaccagattctc-tg 282  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| |||| |||| |||  | | | |||  || ||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta-tttcagaa-aaacacacggcaatcggatgatcttg 1475  T
Q  283 actatacttgttcttctctccccgttgttcttgg-ttttctctcccaaaacttgtttcacgtaaaa 347  Q
     || |||||||||||||||  || | |||||||| |||||||||||||||||||||||||||||||    
T  1476 gctctacttgttcttctct--ccttagttcttggtttttctctcccaaaacttgtttcacgtaaaa 1539  T

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Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 22646 - 22596
Alignment:
Q  194 attttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacc 22596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 2463 - 2422
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2463 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 2422  T

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Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 12296 - 12349
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacc 12349  T

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Target: scaffold0506 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 9296 - 9336
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaa 347  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  9296 ttgttcttggttttctctcccaaaactggtttcacgtaaaa 9336  T

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Target: scaffold0490 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 5984 - 6034
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  5984 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 6034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 13513 - 13563
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  13513 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 13563  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 39563 - 39510
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| ||||||||||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacc 39510  T

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Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 3952 - 3993
Alignment:
Q  307 ttgttcttggttttctctcccaaaactt-gtttcacgtaaaa 347  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3952 ttgttcttggttttctctcccaaagcttggtttcacgtaaaa 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 170909 - 170868
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaac 348  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  170909 ttgttcttggttttctctttcaaaacttgtttcacgtaaaac 170868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 1453 - 1501
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttacc 1501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 24083 - 24134
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||| ||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  24083 ttgtccttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgacc 24134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 13528 - 13579
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacc 359  Q
    |||||||||||||| ||||||||||||||||| || | |||||||||| ||||    
T  13528 ttgttcttggtttt-tctcccaaaacttgttttacatgaaactgcttccgacc 13579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 1967 - 1916
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 5513 - 5563
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||| ||||    
T  5513 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaactgcttttgac 5563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 9336 - 9387
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttacc 9387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 9239 - 9289
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  9239 ttgttcttggtttt-tctcccaaaacttgttttacgtgaaattgcttctgac 9289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 10239 - 10290
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttacc 10290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 71645 - 71695
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    |||||||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  71645 ttgttcttggttct-tctcccaaaacttgttttacgtgaaactgcttctgac 71695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 135438 - 135489
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttacc 135489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 493082 - 493032
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttacc 493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 680 - 774
Alignment:
Q  159 ctcaatttattttccaaaactaagcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccatagtttt 252  Q
    |||||||||||||| | |||||  |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || |||||||||| |||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagtttt 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 848 - 796
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttc-acgtaaaactgcttctgacc 359  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  848 ttgttcttggtttt-tctcccaaaacttgattgtacgtaaaactgcttctgacc 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 5922 - 5861
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttacc 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 2684 - 2631
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacc 244  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacc 2631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 26520 - 26572
Alignment:
Q  307 ttgttcttggttttctctcccaaaacttgtttc-acgtaaaactgcttctgacc 359  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||||||    
T  26520 ttgttcttggtttt-tctcccaaaacttgattgtacgtaaaactgcttctgacc 26572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 358
Target Start/End: Original strand, 5579 - 5615
Alignment:
Q  322 tctcccaaaacttgtttcacgtaaaactgcttctgac 358  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  5579 tctcccaaaacttgttttacgtgaaactgcttctgac 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 53943 - 53986
Alignment:
Q  311 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttct 355  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||    
T  53943 tcttggtttt-tctcccaaaacttgttttacgtgaaactgcttct 53986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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