View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15789_high_37 (Length: 312)
Name: NF15789_high_37
Description: NF15789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15789_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 8 - 295
Target Start/End: Complemental strand, 48660125 - 48659838
Alignment:
| Q |
8 |
agataatactgttggcatagctatgggaattcctccaatcaggagaacaagaaggttgttgattccatccctgtatgaacggtgctccacagggaacatt |
107 |
Q |
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| T |
48660125 |
agataatactgttggcatagctatgggaattcctccaatcaggagaacaagaaggttgttgattccatccctgtatgaacggtgctccacagggaacatt |
48660026 |
T |
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| Q |
108 |
ataattatttcaagaatcatccctatagctattgagcaaatgcagaagttaccaattgaggtaagaacctacagaaaagtaaacaattagatcacagttt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48660025 |
ataattatttcaagaatcatccctatagctattgagcaaatgcagaagttgccaattgaggtaagaacctacagaaaagtaaacaattagatcacagttt |
48659926 |
T |
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| Q |
208 |
aatatttgagtggttaataaaaaacttcgcaaaaataattttatattcaagtgaatttccatatataataaataattaatcttcctta |
295 |
Q |
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| T |
48659925 |
aatatttgagtggttaataaaaaactttgcaaaaataattttatattcaagtgaatttccatatataataaataattaatcttcctta |
48659838 |
T |
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