View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15789_high_59 (Length: 227)
Name: NF15789_high_59
Description: NF15789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15789_high_59 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 44543217 - 44543009
Alignment:
| Q |
1 |
tgggcaatattcaaacacgtgtctcccattcttaacatgtgggaagctggtgaaggttccaagtgatgaatccgaacaaaacgaagaagcccgattctgt |
100 |
Q |
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| T |
44543217 |
tgggcaatattcaaacacgtgtctcccattcttaacatgtgggaagctggtgaaggttccaagtgatgaatccgaacaaaacgaagaagcccgattctgt |
44543118 |
T |
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| Q |
101 |
ctcactctgcatgcatgatatcactccttctattatatttgtaagataataaataaacttcatctcttggctttgcttcaattgacaaaggatgatggag |
200 |
Q |
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| T |
44543117 |
ctcactctgcatgcatgatatcactccttctattatatttgtaagataataaataaacttcatctcttggctttgcttcaattgacaaaggatgatggag |
44543018 |
T |
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| Q |
201 |
gatgaaaag |
209 |
Q |
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||||||||| |
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| T |
44543017 |
gatgaaaag |
44543009 |
T |
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