View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15789_low_36 (Length: 353)
Name: NF15789_low_36
Description: NF15789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15789_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 86 - 347
Target Start/End: Original strand, 48541875 - 48542136
Alignment:
| Q |
86 |
ttaggcacaaatgggatttgtttagcgacagcaagtgacatcaaatttttcaactgttgaggagaagaaggtaacataagatcttcaattttgtccaatc |
185 |
Q |
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| T |
48541875 |
ttaggcacaaatgggatttgtttagcgacagcaagtgacatcaaatttttcaactgttgaggagaagaaggtaacataagatcttcaattttgtccaatc |
48541974 |
T |
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| Q |
186 |
cagctcttttcaacaatgctatattgtgattctttgtcatattcacaccagaacttgcaataactactttctcaatcttctcttctcccaacatcttcgc |
285 |
Q |
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| T |
48541975 |
cagctcttttcaacaatgctatgttgtgattctttgtcatattcacaccagaacttgcaataactactttctcaatcttctcttctcccaacatcttcgc |
48542074 |
T |
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| Q |
286 |
caaattatacgcaactattccaccataactcgttcccaccacgtggcactttttcacaccta |
347 |
Q |
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| T |
48542075 |
caaattatacgcaactattccaccataactcgttcccaccacgtggcactttttcacaccta |
48542136 |
T |
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