View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15789_low_54 (Length: 272)
Name: NF15789_low_54
Description: NF15789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15789_low_54 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 1961845 - 1961593
Alignment:
| Q |
1 |
ccaagactagaactcattgcaaagcaaggatttcagatgtattagagaatgaaaagtttgtcatccatgaatttgttgatgaccttaaccacttaatact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
1961845 |
ccaagactagaactcattgcaaagcaaggatttcagatgtattagagaatgaaaagtttgtcatccatgaatttgttgattaccttaaccacttaatact |
1961746 |
T |
|
| Q |
101 |
ctacaacttttagagacaacattgtcattttgctgtaattttgggatgcatgatagcagtgtaatacctatttaaccgttatcatcaagttgctttgtgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1961745 |
ctacaacttttagagacaacattgtcattttgctgtaattttgggatgcatgatagcagtgtaatacctatttaaccgttatcatcaagttgctttgtgg |
1961646 |
T |
|
| Q |
201 |
attttccaatgtagctagcaatggtattgattataacaattaaatgtgcatct |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1961645 |
attttccaatgtagctagcaatggtattgattataacaattaaatgtgcatct |
1961593 |
T |
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