View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15789_low_68 (Length: 235)
Name: NF15789_low_68
Description: NF15789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15789_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 45192103 - 45192303
Alignment:
| Q |
17 |
caaaggaaagacaaggcaacaatcaggtgacttcaaaagccaaaaacaaggccaaaagcatcaattctgctacacatgggacctcttcagtgccaaataa |
116 |
Q |
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| T |
45192103 |
caaaggaaagacaaggcaacaatcaggtgacttcaaaagccaaaaacaaggccaaaagcatcaattctactacacatgggacctcttcagtgccaaataa |
45192202 |
T |
|
| Q |
117 |
atctgaagacaacaatatggtttgttctcaaaccagacatacagcttcccccgtgttggaaactaaggctgatgattcctcagcggaaatatgtgaaata |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45192203 |
atctgaagacaacaatatggtttgttctcaaaccagacatacagcttcccccgtgttggaaactaaggctgatgattcctcagcggaaatatgtgaaata |
45192302 |
T |
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| Q |
217 |
c |
217 |
Q |
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| T |
45192303 |
c |
45192303 |
T |
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