View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15789_low_84 (Length: 207)
Name: NF15789_low_84
Description: NF15789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15789_low_84 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 41123646 - 41123818
Alignment:
| Q |
14 |
cacagatggtgcaacctgtggttcttcatatatatatgcagagttctttgctacaatgtatgatattgatataacctatttgtataattggtggagtctc |
113 |
Q |
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| T |
41123646 |
cacagatggtgcaacctgtggttctccatat----atgcagagttctttgctacaatgtatgatattgatataacctatttgtataattggtggagtctc |
41123741 |
T |
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| Q |
114 |
tatagctcgaatgtgattctaagtaattggtggtttggagtcttactattagatggagaaactgtttgcagtcatat |
190 |
Q |
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| T |
41123742 |
tatagctcgaatgtgattctaagtaattgatggtttggagtcttactattagatggagaaactgtttgcagtcatat |
41123818 |
T |
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