View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1578_low_5 (Length: 248)
Name: NF1578_low_5
Description: NF1578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1578_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 7088659 - 7088424
Alignment:
| Q |
1 |
ctggtccattacctctttcttttgtcaacattagttcaataaggttcatcgatctctcgcataattcattcacgggacaaatgcctgatagtttctttga |
100 |
Q |
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| T |
7088659 |
ctggtccattacctctttcttttgtcaacatgagttcaataaggttcattgatctctcgcataattcgttcgcgggacaaatgcctgatggtttcttcga |
7088560 |
T |
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| Q |
101 |
gaattgtttctcccttcgtcgcgtctctttatctatgaacttatttgaaggacaaattcctaccacactttcaaaatgttctttgttgaatagtgttgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7088559 |
gaattgtttctcccttcgtcgcgtctctttatctatgaacttatttgaaggacaaattcctaccacactttcaaaatgttctttgttgaatagtgttgat |
7088460 |
T |
|
| Q |
201 |
ctttcaaataatcattttagtggtaatgttgatttt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
7088459 |
ctttcaaataatcattttagtggtaatgttgatttt |
7088424 |
T |
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