View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15790_high_5 (Length: 324)
Name: NF15790_high_5
Description: NF15790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15790_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 307
Target Start/End: Original strand, 41303079 - 41303370
Alignment:
| Q |
16 |
ataggtgaaggagtaatacatggtgaactttcagaaatgctaaattgaagcataactgatgttgagaatgaaaatgatcattctagtgaaaaagcttcta |
115 |
Q |
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| T |
41303079 |
ataggtgaaggagtaatacatggtgaactttcagaaatgctaaatttaagcataactgatgttgagaatgaaaaggatcattctagtgaaaaagcttcta |
41303178 |
T |
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| Q |
116 |
ctagcgaagtggttcccgttaatgaagagtatatcgatcaaggaactcaagagtccccattttccacaatacctgaccctctcgccaagaataatcatga |
215 |
Q |
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| T |
41303179 |
ctagcgaagtggttcccgttaatgaagagtatatcgatcaaggaactcaagagtccccattctccacaatacccgaccctctcaccgagaataatcatga |
41303278 |
T |
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| Q |
216 |
ggtaagctctcctattatctcattatctaccaatgctcctataagatatgagttgccttcaaagaacaatcgaggaaagccacccaatagat |
307 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
41303279 |
ggtaagctctcctattatctcattatctactaatgctcctatgagatatgagttgccttcaaggaacaatcgaggaaagccacccaatagat |
41303370 |
T |
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