View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15791_high_26 (Length: 279)
Name: NF15791_high_26
Description: NF15791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15791_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 6240424 - 6240159
Alignment:
| Q |
1 |
aacatactagctttaaaacctaagtgaccgggttaagtttcaaaggttagagttaagacaagtaatttnnnnnnnngcaaacatattacaacatactaac |
100 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
6240424 |
aacatactagcattaaaacctaagtgaccgggttaagtttcaaaggttagagttaagacaagtaatttaaaaaaaagcaaacatattacaacatactaac |
6240325 |
T |
|
| Q |
101 |
atccaaacatcaacttataatttcattaacccttaaacacgaaatgggttagctcatggtaagcttaagaaataaaatggaatgatattcatcgtcaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6240324 |
atccaaacatcaacttataatttcattaacccttaaacacgaaatgggttagctcatggtaagcttaagaaataaaatggaatgatattcatcgtcaaaa |
6240225 |
T |
|
| Q |
201 |
gagtcattttaaagataaaacgacacaacgaatctctttgcatcctcactaagcatcaactctcct |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6240224 |
gagtcattttaaagataaaacgacacaacgaatctctttgcatcctcactaagcatcaactctcct |
6240159 |
T |
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