View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15794_low_3 (Length: 280)
Name: NF15794_low_3
Description: NF15794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15794_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 44119917 - 44119662
Alignment:
| Q |
18 |
acaatggtgtttgaaaacacgaaaactaatgtgattcagtttaataaataaatttatacctcgctaatttatcatgtcttgcgcataaattaggtgaggt |
117 |
Q |
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| T |
44119917 |
acaatggtgtttgaaaacacgaaaactaatgtgattcagtttaataaataaatttatacctcgctaatttatcatgtcttgcgcataaattaggtgaggt |
44119818 |
T |
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| Q |
118 |
tgtcttctcaacacctttgtttttcgcttaaaggtgttaagatacgagtatttgtttttggtgctttgtttatagccttgcaaaagaaatacaataaaaa |
217 |
Q |
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| T |
44119817 |
tgtcttctcaacacctttgtttttcgcttaaaggtgttaagatacgagtatttgttttcggtgctttgtttatagccttgcaaaagaaatacaataaaaa |
44119718 |
T |
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| Q |
218 |
tatttttgcctgacatgatattcaaacaaagagttaacccaaacttgattttattc |
273 |
Q |
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| T |
44119717 |
tatttttgcctgacatgatattcaaacaaagagttaacccaaacttgattttattc |
44119662 |
T |
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