View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1579_high_2 (Length: 686)

Name: NF1579_high_2
Description: NF1579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1579_high_2
NF1579_high_2
[»] chr3 (70 HSPs)
chr3 (1-670)||(53917911-53918585)
chr3 (1-339)||(457955-458294)
chr3 (1-339)||(455578-455917)
chr3 (1-339)||(746427-746767)
chr3 (1-339)||(4104142-4104478)
chr3 (1-339)||(25533112-25533452)
chr3 (1-339)||(10621777-10622122)
chr3 (1-339)||(42991958-42992296)
chr3 (43-339)||(42989957-42990253)
chr3 (1-339)||(41848809-41849162)
chr3 (1-339)||(1313087-1313419)
chr3 (1-339)||(53915743-53916077)
chr3 (1-339)||(51943047-51943381)
chr3 (91-339)||(27635962-27636207)
chr3 (271-339)||(6561618-6561686)
chr3 (261-334)||(53974124-53974197)
chr3 (1-132)||(6561693-6561820)
chr3 (1-50)||(9604854-9604903)
chr3 (261-334)||(11072644-11072717)
chr3 (2-57)||(38889993-38890049)
chr3 (1-91)||(38210291-38210380)
chr3 (178-261)||(11066346-11066429)
chr3 (1-86)||(10084636-10084722)
chr3 (261-334)||(11066255-11066329)
chr3 (1-50)||(30005801-30005851)
chr3 (1-50)||(42990264-42990314)
chr3 (195-256)||(53974012-53974074)
chr3 (1-93)||(10191556-10191649)
chr3 (1-48)||(6063693-6063741)
chr3 (1-52)||(47149142-47149194)
chr3 (189-261)||(54287487-54287559)
chr3 (261-312)||(54287576-54287627)
chr3 (1-46)||(1626930-1626976)
chr3 (1-46)||(3859492-3859538)
chr3 (1-46)||(4308528-4308574)
chr3 (1-46)||(5191617-5191663)
chr3 (1-46)||(5522862-5522908)
chr3 (1-46)||(11163114-11163160)
chr3 (1-46)||(11170368-11170414)
chr3 (1-46)||(28102249-28102295)
chr3 (1-46)||(28137542-28137588)
chr3 (1-46)||(35918196-35918242)
chr3 (1-46)||(43226050-43226096)
chr3 (1-46)||(43228255-43228301)
chr3 (1-46)||(45882903-45882949)
chr3 (195-264)||(11072731-11072800)
chr3 (1-93)||(15780781-15780870)
chr3 (1-48)||(18099417-18099465)
chr3 (1-48)||(50493961-50494009)
chr3 (304-339)||(27000088-27000123)
chr3 (1-47)||(27101428-27101475)
chr3 (1-93)||(48361918-48362006)
chr3 (11-93)||(1321362-1321441)
chr3 (1-46)||(6231413-6231459)
chr3 (1-46)||(24979671-24979717)
chr3 (1-46)||(26720512-26720558)
chr3 (1-46)||(28100288-28100334)
chr3 (1-46)||(32219059-32219105)
chr3 (1-46)||(32264286-32264332)
chr3 (1-46)||(35777385-35777431)
chr3 (1-46)||(43423710-43423756)
chr3 (1-46)||(47701842-47701888)
chr3 (1-46)||(51675002-51675048)
chr3 (1-46)||(51727253-51727299)
chr3 (1-45)||(10956274-10956319)
chr3 (1-45)||(10958570-10958615)
chr3 (1-91)||(18097147-18097235)
chr3 (1-102)||(28761675-28761773)
chr3 (2-50)||(29956646-29956695)
chr3 (47-115)||(23633359-23633427)
[»] chr8 (40 HSPs)
chr8 (1-339)||(15808967-15809305)
chr8 (1-339)||(3873755-3874096)
chr8 (1-339)||(28283468-28283808)
chr8 (6-339)||(43529876-43530209)
chr8 (42-339)||(41382424-41382721)
chr8 (71-339)||(41384498-41384764)
chr8 (2-339)||(608475-608819)
chr8 (186-339)||(32339099-32339252)
chr8 (227-339)||(3265635-3265747)
chr8 (1-132)||(32339263-32339395)
chr8 (1-132)||(24873430-24873564)
chr8 (1-193)||(181434-181623)
chr8 (1-93)||(15072707-15072796)
chr8 (1-93)||(3886167-3886256)
chr8 (263-334)||(13986304-13986374)
chr8 (1-102)||(13858733-13858831)
chr8 (1-102)||(14419440-14419538)
chr8 (1-48)||(12517273-12517321)
chr8 (1-93)||(14807748-14807837)
chr8 (178-264)||(11701364-11701447)
chr8 (263-334)||(30679186-30679256)
chr8 (1-46)||(4424058-4424104)
chr8 (1-46)||(5622987-5623033)
chr8 (1-46)||(18810748-18810794)
chr8 (1-46)||(27107146-27107192)
chr8 (1-46)||(27827026-27827072)
chr8 (1-46)||(27829337-27829383)
chr8 (1-46)||(33541637-33541683)
chr8 (1-46)||(37214459-37214505)
chr8 (1-50)||(43082009-43082059)
chr8 (1-46)||(44720883-44720929)
chr8 (1-45)||(36865579-36865624)
chr8 (1-93)||(15067978-15068067)
chr8 (4-46)||(26775241-26775284)
chr8 (1-46)||(1225206-1225252)
chr8 (1-46)||(14477316-14477362)
chr8 (1-46)||(18812933-18812979)
chr8 (1-50)||(22684905-22684955)
chr8 (2-46)||(25952561-25952606)
chr8 (6-46)||(35872632-35872673)
[»] chr7 (65 HSPs)
chr7 (1-339)||(3035420-3035761)
chr7 (1-339)||(11756930-11757269)
chr7 (1-339)||(20299160-20299499)
chr7 (1-339)||(28487254-28487593)
chr7 (1-339)||(18345242-18345581)
chr7 (1-339)||(38393688-38394026)
chr7 (1-339)||(28485266-28485606)
chr7 (1-339)||(20625739-20626078)
chr7 (1-339)||(20629630-20629969)
chr7 (1-339)||(20642049-20642388)
chr7 (3-339)||(7094673-7095010)
chr7 (1-339)||(7472229-7472569)
chr7 (3-339)||(7092426-7092763)
chr7 (1-339)||(7351901-7352241)
chr7 (1-339)||(7470271-7470616)
chr7 (1-339)||(7349522-7349862)
chr7 (38-339)||(38395991-38396292)
chr7 (1-339)||(31156160-31156495)
chr7 (38-339)||(1849670-1849971)
chr7 (62-339)||(1606176-1606452)
chr7 (1-339)||(42331248-42331588)
chr7 (78-339)||(21470618-21470878)
chr7 (1-339)||(37412377-37412711)
chr7 (144-339)||(47865333-47865528)
chr7 (71-339)||(21989858-21990124)
chr7 (143-336)||(24258166-24258358)
chr7 (1-240)||(20297163-20297402)
chr7 (1-256)||(43253765-43254027)
chr7 (1-275)||(13099725-13099996)
chr7 (196-339)||(443331-443474)
chr7 (72-339)||(3677002-3677252)
chr7 (216-339)||(40281862-40281987)
chr7 (1-85)||(48457608-48457693)
chr7 (281-334)||(20297108-20297161)
chr7 (1-132)||(443507-443635)
chr7 (261-334)||(10690684-10690756)
chr7 (1-93)||(27306478-27306567)
chr7 (290-336)||(43254023-43254069)
chr7 (1-57)||(40946311-40946368)
chr7 (1-93)||(44515-44604)
chr7 (1-86)||(9680772-9680859)
chr7 (2-131)||(24258375-24258502)
chr7 (1-46)||(1049544-1049590)
chr7 (1-50)||(1849971-1850021)
chr7 (1-58)||(9679041-9679099)
chr7 (1-46)||(11355252-11355298)
chr7 (178-264)||(12310442-12310528)
chr7 (261-327)||(12310542-12310608)
chr7 (1-46)||(20137358-20137404)
chr7 (1-46)||(21680021-21680067)
chr7 (1-46)||(22828882-22828928)
chr7 (1-46)||(26804563-26804609)
chr7 (1-48)||(3878569-3878617)
chr7 (1-93)||(18567564-18567653)
chr7 (1-93)||(31435296-31435385)
chr7 (23-115)||(7188472-7188560)
chr7 (217-264)||(12484976-12485023)
chr7 (217-264)||(12506407-12506454)
chr7 (1-50)||(1047173-1047223)
chr7 (1-46)||(21678060-21678106)
chr7 (1-46)||(22251791-22251837)
chr7 (1-50)||(38396306-38396356)
chr7 (1-46)||(44724573-44724619)
chr7 (2-46)||(21592393-21592438)
chr7 (1-93)||(35580-35669)
[»] chr5 (49 HSPs)
chr5 (1-339)||(18468703-18469041)
chr5 (1-339)||(27910140-27910480)
chr5 (1-339)||(27912224-27912566)
chr5 (1-324)||(10586549-10586872)
chr5 (1-339)||(25803712-25804055)
chr5 (1-339)||(15551930-15552275)
chr5 (62-339)||(3373348-3373625)
chr5 (1-339)||(18511461-18511797)
chr5 (1-339)||(18509567-18509902)
chr5 (1-339)||(26097426-26097763)
chr5 (1-256)||(18466461-18466714)
chr5 (71-339)||(26098567-26098836)
chr5 (1-336)||(18596334-18596675)
chr5 (161-339)||(21288534-21288713)
chr5 (195-337)||(17415751-17415893)
chr5 (240-339)||(6661929-6662028)
chr5 (146-256)||(15143270-15143373)
chr5 (265-339)||(40221287-40221361)
chr5 (1-85)||(4410006-4410091)
chr5 (290-340)||(15143224-15143274)
chr5 (261-334)||(5779144-5779217)
chr5 (290-339)||(18466416-18466465)
chr5 (143-211)||(40221340-40221408)
chr5 (1-86)||(1189858-1189945)
chr5 (1-91)||(21684700-21684797)
chr5 (1-50)||(34477303-34477353)
chr5 (1-50)||(34479668-34479718)
chr5 (1-93)||(2818585-2818674)
chr5 (1-46)||(2174903-2174949)
chr5 (1-46)||(20043034-20043080)
chr5 (1-46)||(31542719-31542765)
chr5 (47-132)||(41585998-41586083)
chr5 (1-93)||(25921722-25921811)
chr5 (1-47)||(6747289-6747336)
chr5 (2-48)||(16092450-16092497)
chr5 (2-93)||(20507712-20507800)
chr5 (1-46)||(4236613-4236659)
chr5 (1-50)||(6745049-6745099)
chr5 (1-46)||(6756478-6756524)
chr5 (1-46)||(16776142-16776188)
chr5 (1-46)||(17072867-17072913)
chr5 (1-46)||(25904087-25904133)
chr5 (1-46)||(31179620-31179666)
chr5 (1-46)||(31472862-31472908)
chr5 (1-46)||(31545064-31545110)
chr5 (1-46)||(34530915-34530961)
chr5 (3-43)||(10474574-10474615)
chr5 (1-93)||(12556172-12556261)
chr5 (1-132)||(40221426-40221552)
[»] chr1 (67 HSPs)
chr1 (1-339)||(31735772-31736110)
chr1 (1-339)||(47905961-47906300)
chr1 (1-339)||(9463495-9463835)
chr1 (1-339)||(27337189-27337527)
chr1 (1-339)||(9459668-9460008)
chr1 (1-339)||(24325352-24325693)
chr1 (1-339)||(27339381-27339725)
chr1 (1-339)||(39931767-39932103)
chr1 (1-317)||(21948438-21948756)
chr1 (1-339)||(15295085-15295434)
chr1 (1-339)||(28998504-28998839)
chr1 (1-339)||(29004220-29004555)
chr1 (71-339)||(17324954-17325222)
chr1 (1-339)||(48664857-48665207)
chr1 (146-340)||(2949617-2949811)
chr1 (152-339)||(4131690-4131877)
chr1 (154-336)||(45693834-45694016)
chr1 (159-328)||(6115532-6115701)
chr1 (38-232)||(46432013-46432207)
chr1 (1-222)||(2510575-2510801)
chr1 (156-340)||(6997218-6997395)
chr1 (146-306)||(6996067-6996221)
chr1 (229-339)||(46432521-46432631)
chr1 (215-337)||(16561138-16561260)
chr1 (178-264)||(11693580-11693666)
chr1 (178-334)||(13785662-13785835)
chr1 (146-210)||(26520516-26520580)
chr1 (143-205)||(6115479-6115541)
chr1 (178-261)||(14352759-14352842)
chr1 (263-334)||(32260746-32260817)
chr1 (1-91)||(47177301-47177392)
chr1 (1-91)||(47179652-47179743)
chr1 (1-92)||(12302756-12302849)
chr1 (1-117)||(6995951-6996064)
chr1 (1-93)||(28207317-28207406)
chr1 (1-93)||(28842434-28842525)
chr1 (215-264)||(32260833-32260882)
chr1 (1-93)||(13215022-13215111)
chr1 (1-93)||(38925729-38925818)
chr1 (1-93)||(41646861-41646950)
chr1 (1-46)||(6822999-6823045)
chr1 (261-299)||(10115517-10115555)
chr1 (1-46)||(17318877-17318923)
chr1 (1-46)||(18307093-18307139)
chr1 (1-46)||(20302443-20302489)
chr1 (1-50)||(25127852-25127902)
chr1 (1-46)||(25248765-25248811)
chr1 (1-46)||(31423125-31423171)
chr1 (1-46)||(51750023-51750069)
chr1 (1-38)||(9241337-9241374)
chr1 (1-45)||(16428638-16428683)
chr1 (1-86)||(25251526-25251608)
chr1 (1-48)||(4131630-4131678)
chr1 (178-261)||(10115572-10115653)
chr1 (225-269)||(13112047-13112091)
chr1 (1-93)||(15823487-15823576)
chr1 (267-334)||(11693686-11693753)
chr1 (305-339)||(6997388-6997422)
chr1 (1-46)||(11457726-11457772)
chr1 (1-46)||(17186379-17186425)
chr1 (1-46)||(18839571-18839617)
chr1 (1-93)||(28840619-28840710)
chr1 (1-46)||(31425270-31425316)
chr1 (2-46)||(51752349-51752394)
chr1 (290-334)||(14352429-14352473)
chr1 (47-131)||(26520412-26520495)
chr1 (1-93)||(47451589-47451678)
[»] chr4 (72 HSPs)
chr4 (1-339)||(24347964-24348302)
chr4 (1-339)||(22132639-22132982)
chr4 (38-339)||(22134913-22135214)
chr4 (1-339)||(17662483-17662821)
chr4 (1-339)||(14787680-14788016)
chr4 (1-339)||(44600087-44600423)
chr4 (1-339)||(5100748-5101081)
chr4 (1-339)||(56030194-56030528)
chr4 (143-328)||(30136331-30136516)
chr4 (195-339)||(47211159-47211303)
chr4 (1-216)||(53404998-53405214)
chr4 (143-335)||(38890517-38890692)
chr4 (1-169)||(47210989-47211160)
chr4 (178-339)||(10112631-10112787)
chr4 (178-339)||(9022065-9022225)
chr4 (1-132)||(18709412-18709548)
chr4 (190-336)||(9863507-9863650)
chr4 (143-237)||(19322547-19322641)
chr4 (243-339)||(19322413-19322510)
chr4 (273-339)||(14789500-14789566)
chr4 (1-91)||(37089620-37089710)
chr4 (178-264)||(54929094-54929180)
chr4 (1-93)||(5637714-5637807)
chr4 (1-85)||(8631668-8631753)
chr4 (261-334)||(38209186-38209259)
chr4 (1-93)||(47274722-47274811)
chr4 (185-264)||(10979676-10979755)
chr4 (1-91)||(11008815-11008906)
chr4 (266-328)||(5516771-5516833)
chr4 (1-93)||(38409194-38409289)
chr4 (1-91)||(11006486-11006577)
chr4 (1-93)||(36919834-36919925)
chr4 (1-54)||(3824819-3824871)
chr4 (1-93)||(5198415-5198504)
chr4 (1-48)||(7941357-7941405)
chr4 (1-93)||(22802983-22803072)
chr4 (1-93)||(24888791-24888880)
chr4 (1-93)||(48486314-48486403)
chr4 (1-93)||(51015241-51015330)
chr4 (1-92)||(36378288-36378376)
chr4 (1-93)||(9148246-9148337)
chr4 (1-46)||(11434993-11435039)
chr4 (1-58)||(13543985-13544043)
chr4 (1-46)||(22044639-22044685)
chr4 (1-46)||(22046934-22046980)
chr4 (1-46)||(31849848-31849894)
chr4 (1-46)||(38928427-38928473)
chr4 (1-46)||(40637112-40637158)
chr4 (1-45)||(2891356-2891401)
chr4 (261-330)||(29609914-29609983)
chr4 (2-46)||(37313316-37313361)
chr4 (1-93)||(619696-619785)
chr4 (1-48)||(16453345-16453393)
chr4 (1-93)||(22801111-22801200)
chr4 (178-241)||(38209098-38209162)
chr4 (1-93)||(40091664-40091753)
chr4 (202-261)||(29609838-29609897)
chr4 (1-46)||(6764877-6764923)
chr4 (1-46)||(9174395-9174441)
chr4 (1-46)||(9176723-9176769)
chr4 (1-46)||(12396094-12396140)
chr4 (1-46)||(12401056-12401102)
chr4 (1-46)||(18847191-18847237)
chr4 (1-50)||(22780622-22780672)
chr4 (1-50)||(22782987-22783037)
chr4 (1-46)||(24880489-24880535)
chr4 (1-46)||(33415736-33415782)
chr4 (1-93)||(36921743-36921833)
chr4 (1-115)||(52942695-52942806)
chr4 (215-256)||(5516703-5516744)
chr4 (6-46)||(24446833-24446874)
chr4 (263-334)||(54929198-54929267)
[»] chr2 (40 HSPs)
chr2 (1-339)||(23452486-23452824)
chr2 (1-339)||(35215835-35216179)
chr2 (1-339)||(42452454-42452789)
chr2 (1-339)||(35218212-35218560)
chr2 (1-339)||(42923758-42924089)
chr2 (143-339)||(27583713-27583902)
chr2 (178-334)||(28568584-28568740)
chr2 (215-339)||(27136368-27136500)
chr2 (249-337)||(34575608-34575696)
chr2 (178-334)||(15693583-15693755)
chr2 (271-334)||(28568346-28568409)
chr2 (261-334)||(41303549-41303623)
chr2 (178-263)||(7502638-7502723)
chr2 (1-93)||(21520942-21521033)
chr2 (1-57)||(5377678-5377735)
chr2 (195-256)||(39286979-39287040)
chr2 (1-93)||(40032307-40032396)
chr2 (3-86)||(6264396-6264476)
chr2 (143-239)||(34575528-34575617)
chr2 (1-47)||(38020161-38020208)
chr2 (185-256)||(41304806-41304876)
chr2 (1-46)||(13910293-13910339)
chr2 (1-46)||(19504594-19504640)
chr2 (4-86)||(22163199-22163278)
chr2 (1-91)||(24162461-24162548)
chr2 (1-46)||(28196597-28196643)
chr2 (1-46)||(31733014-31733060)
chr2 (2-46)||(19007600-19007645)
chr2 (1-93)||(43623817-43623906)
chr2 (280-331)||(7502582-7502633)
chr2 (266-330)||(39286892-39286952)
chr2 (1-46)||(19502260-19502306)
chr2 (1-46)||(22287585-22287631)
chr2 (1-46)||(27104759-27104805)
chr2 (186-256)||(41303457-41303527)
chr2 (261-334)||(41304898-41304964)
chr2 (1-46)||(42064475-42064521)
chr2 (1-58)||(45239225-45239283)
chr2 (1-93)||(6259064-6259153)
chr2 (1-93)||(22407658-22407747)
[»] chr6 (37 HSPs)
chr6 (1-339)||(2629134-2629474)
chr6 (1-339)||(30966928-30967266)
chr6 (2-339)||(30034853-30035191)
chr6 (1-339)||(12195764-12196099)
chr6 (1-339)||(19704818-19705160)
chr6 (71-339)||(18317756-18318024)
chr6 (143-339)||(5275727-5275923)
chr6 (1-339)||(26932811-26933153)
chr6 (1-336)||(17852275-17852607)
chr6 (147-339)||(17011784-17011973)
chr6 (143-339)||(22858343-22858531)
chr6 (178-339)||(20526551-20526708)
chr6 (1-91)||(20915605-20915694)
chr6 (178-264)||(30445318-30445404)
chr6 (1-115)||(15532930-15533040)
chr6 (1-115)||(15541389-15541499)
chr6 (261-322)||(30445243-30445304)
chr6 (261-334)||(30443022-30443097)
chr6 (1-91)||(4816480-4816581)
chr6 (1-47)||(28241570-28241617)
chr6 (1-46)||(24338697-24338743)
chr6 (1-46)||(25477293-25477339)
chr6 (1-50)||(26065001-26065051)
chr6 (1-50)||(26084970-26085020)
chr6 (1-46)||(32447565-32447611)
chr6 (1-102)||(3390346-3390444)
chr6 (1-93)||(1072126-1072215)
chr6 (1-48)||(8995496-8995544)
chr6 (1-48)||(9019943-9019991)
chr6 (198-264)||(30443111-30443175)
chr6 (1-46)||(3630113-3630159)
chr6 (1-46)||(11983278-11983324)
chr6 (1-46)||(13057213-13057259)
chr6 (1-46)||(14459014-14459060)
chr6 (1-46)||(14507424-14507470)
chr6 (1-45)||(3233980-3234025)
chr6 (1-46)||(22490658-22490705)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-339)||(51714-52050)
scaffold0005 (273-339)||(50164-50230)
[»] scaffold0511 (1 HSPs)
scaffold0511 (1-339)||(1740-2081)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-339)||(11722-12056)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-339)||(78888-79224)
[»] scaffold0468 (2 HSPs)
scaffold0468 (229-339)||(2070-2180)
scaffold0468 (143-201)||(2022-2080)
[»] scaffold0133 (1 HSPs)
scaffold0133 (196-338)||(4552-4694)
[»] scaffold1674 (1 HSPs)
scaffold1674 (250-339)||(1-90)
[»] scaffold0025 (2 HSPs)
scaffold0025 (3-93)||(73274-73365)
scaffold0025 (1-57)||(69540-69597)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-93)||(3947-4036)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-91)||(29113-29210)
[»] scaffold0008 (2 HSPs)
scaffold0008 (195-261)||(57840-57905)
scaffold0008 (263-334)||(57926-57995)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-47)||(41732-41779)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-50)||(30-80)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-46)||(2873-2919)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-93)||(14969-15058)
scaffold0131 (1-48)||(14631-14679)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-46)||(1080-1126)


Alignment Details
Target: chr3 (Bit Score: 447; Significance: 0; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 1 - 670
Target Start/End: Original strand, 53917911 - 53918585
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| |||||||| |||||    || |||||  ||||| ||  |||||| ||||||||| ||||||||||||    
T  53917911 gttttgttgttgtcattctaaaccattgtttcagccccctccatctc----aaggtttaatctgattcaaggtctatatttatagtaaaagtataactca 53918006  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||| ||| ||||| ||||||||||||||          |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  53918007 taaatttgaaacgaataccacactgaagatacgttttttttt-ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 53918105  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  53918106 ttgcatcaaatcgttcttcatacggtaaaaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatattttta 53918205  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatactat--------cagactttgtagaatggtgttgatgtctcttaaaatctccttgtcatggtg 391  Q
    | |||||||||||||||||||||||||||||||||||||||        || ||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  53918206 gcaacaatattctccatccatcaaattttgagtcatactataacaatatcaaactctgtagaatggtgttgatgtctcttaatatctccttctcatggtg 53918305  T
Q  392 ctctctaatttatgtctacgaaatcttgcagagtatagtcgatgcct-ttcaatcagctcgggtgtctatttcttattctagctaccgagtgttgtaagg 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53918306 ctctctaatttatgtctacgaaatcttgcagagtatagtcgatgcctcttcaatcagctcgggtgtccatttcttattctagctaccgagtgttgtaagg 53918405  T
Q  491 ctcctcaagcaaccaattgtaagagaaagagttcaagcctacaactcattgcgtccattttataatgtcctaatacaactttacaacgccaaatacatct 590  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  53918406 ctcctcaagcaaccaattgtaagagaaagagttcaagcctacaactcattgcgtccattttagaatgtcctaatactactttacaacgtcaaatacatct 53918505  T
Q  591 agcacaaaaacagacccccaaacaacacaaaatactgtaggcaactacttaacatagaaccatttccgatggcaaaatac 670  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53918506 agcacaaaaacacacccccaaacaacacaaaatactgtagccaactacttaacatagaaccatttccgatggcaaaatac 53918585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 458294 - 457955
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||  |||||| ||||||||| ||||||||||||    
T  458294 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagtataactca 458195  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  458194 taaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 458095  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  458094 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 457995  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||| |||||||||||||||||||||||||||    
T  457994 gcaacaatattccccatccatcaaattttgagtcatacta 457955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 455917 - 455578
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||  |||||| ||||||||| ||||||||||||    
T  455917 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaaaagtataactca 455818  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| ||||||||||||||  |||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  455817 taaatttggaacaaataccgcactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 455718  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  455717 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 455618  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||| |||||||||||||||||||||||||||    
T  455617 gcaacaatattccccatccatcaaattttgagtcatacta 455578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 746767 - 746427
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  746767 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 746668  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  746667 cataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 746569  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  746568 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 746469  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  746468 tagcaacaatattctccatccatcaaattttgagtcatacta 746427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 4104142 - 4104478
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  4104142 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 4104241  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| |||||||   ||||          ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4104242 taaatttggaacaaataccacactga---tacgttttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatatat 4104338  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||||||||    
T  4104339 ttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttatattttta 4104438  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||| | ||||||||||||||||||||||||    
T  4104439 gcaacaatattcttcttccatcaaattttgagtcatacta 4104478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 25533452 - 25533112
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc----aaagtttagcctgatacacagtctatctttatagtacaagtataa 95  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||    ||||||||||||||||||  |||||| ||||||||| ||||||||    
T  25533452 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataa 25533353  T
Q  96 ctcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaact 195  Q
    ||||||| ||| |||||||||  ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  25533352 ctcataaatttagaacaaatatcacactgaagatacgttttttt---ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 25533256  T
Q  196 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatt 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  25533255 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatatt 25533156  T
Q  296 tttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  25533155 tttagcaacaatattctccatccatcaaattttgagtcatacta 25533112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 10621777 - 10622122
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--------aaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||||||        ||||||||||||||||||  |||||| ||||||||| ||||    
T  10621777 gttttgttgttgcttttctaaacccttgtttcagcaccctctatctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 10621876  T
Q  92 ataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttca 191  Q
    ||||||||||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10621877 ataactcataaatttggaacaaataccacactgaagatacgtttttttt--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttca 10621974  T
Q  192 aactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatctttta 291  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  10621975 aaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatctttta 10622074  T
Q  292 tatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10622075 tatttttagcaacaatattctccatccatcaaattttgagtcatacta 10622122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 42992296 - 42991958
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||||||| |||||||  || ||| ||||||||| ||||||||||||    
T  42992296 gttttgttgttgcctttttaaacccttgtttcagccccctctatctctcttaaagtttagcatgatacaaggtatatatttatagtaaaagtataactca 42992197  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||  ||||  ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42992196 taaatttggaattaatattacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 42992098  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  42992097 ttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatattttta 42991998  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
      ||||||||||||||||||||||||||||||||||||||    
T  42991997 acaacaatattctccatccatcaaattttgagtcatacta 42991958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 43 - 339
Target Start/End: Complemental strand, 42990253 - 42989957
Alignment:
Q  43 tctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnn 142  Q
    |||||||||||||||||| |||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||               
T  42990253 tctctctcaaagtttagcatgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacatttttttttt 42990154  T
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 242  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42990153 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 42990054  T
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||  ||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42990053 gtccataaatatactttcagcaaaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 42989957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 41849162 - 41848809
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatct------ctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||||   ||||||||| ||||||| |||||||||||||      |||||||||||||||||||||||  |||||| ||||||||| ||||||    
T  41849162 gttttgttgttgttattctaaacccttgtttcagccccctctatctatctctctctcaaagtttagcctgatacaatgtctatatttatagtaaaagtat 41849063  T
Q  94 aactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnn--------ctccttcagtgaaagaatatttgcataaaaaatataatattcc 185  Q
    ||||||||| |||||||||||||| ||||||||||||||                  ||| |||||| ||||||||||||||| ||||||||||||||||    
T  41849062 aactcataaatttggaacaaataccacactgaagatacgttttttttttttttttttctctttcagttaaagaatatttgcatcaaaaatataatattcc 41848963  T
Q  186 ctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaat 285  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  41848962 ttttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 41848863  T
Q  286 cttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41848862 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 41848809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 1313419 - 1313087
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcat 100  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||    || |||||  ||||| ||  |||||| ||||||||| |||||||||||||    
T  1313419 gttttgttgttgccattgtaaaccttgtttcagccccctctatctc----aaggtttactctgattcaaggtctatatttatagtaaaagtataactcat 1313324  T
Q  101 aactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatt 200  Q
    || |||||||| ||||  ||||| |||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  1313323 aaatttggaacgaatatcacactaaagatac--tttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatt 1313226  T
Q  201 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttag 300  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||||    
T  1313225 tgcatcaaatcgttcttcatacggtacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatatttttag 1313126  T
Q  301 taacaatattctccatccatcaaattttgagtcatacta 339  Q
     ||||||||||||||||||||||||||||||||||||||    
T  1313125 caacaatattctccatccatcaaattttgagtcatacta 1313087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 53915743 - 53916077
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | | ||||||| ||||||| |||||||||||||     || |||||  ||||| ||  |||||| ||||||||| ||||||||||||    
T  53915743 gttttgttgttgtcatcctaaacccttgtttcagccccctctatctt----aaggtttactctgattcaaggtctatatttatagtaaaagtataactca 53915838  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||| ||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  53915839 taaatttggaacgaataccacactcaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 53915937  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  53915938 ttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 53916037  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||| ||||||||||||||||||||    
T  53916038 gcaacaatattctccatccctcaaattttgagtcatacta 53916077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 51943381 - 51943047
Alignment:
Q  1 gttttgttgttgcctttctaaacctt-gtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||     | |||||  ||||| ||  |||||| ||||||||| |||||||| |||    
T  51943381 gttttgttgttgcctttctaaacctttgtttcagcaccctctatctcc----aggtttactctgattcaaggtctatatttatagtaaaagtataaatca 51943286  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  51943285 taaatttggaacgaataccacactgaagatacgtttttcttt-ctccttcaatgaaagaatatttacatcaaaaatataatattccctttcaaaatatat 51943187  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  51943186 ttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 51943087  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||| ||||||||||||||||||||||||||    
T  51943086 gcaacaatattcttcatccatcaaattttgagtcatacta 51943047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 91 - 339
Target Start/End: Original strand, 27635962 - 27636207
Alignment:
Q  91 tataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttc 190  Q
    |||||||||||| |||||||| ||||| |||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||    
T  27635962 tataactcataaatttggaacgaataccacactgaagatac---atttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttc 27636058  T
Q  191 aaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatctttt 290  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||    
T  27636059 aaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatatttt 27636158  T
Q  291 atatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  27636159 atatttttagcaacaatattctccatccatcaaattttaaatcatacta 27636207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 339
Target Start/End: Complemental strand, 6561686 - 6561618
Alignment:
Q  271 atatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  6561686 atatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatacta 6561618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 53974124 - 53974197
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| ||| |||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  53974124 agcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagtca 53974197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 6561820 - 6561693
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    || |||||  ||||||||  |||||| ||||||| | || |||||||||    
T  6561820 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaggtttactctgatacaaggtctatatttatag-agaaatataactca 6561726  T
Q  100 taactttggaacaaatacaacactgaagatacg 132  Q
    ||| |||||||| ||||  ||||||||||||||    
T  6561725 taaatttggaacgaatatcacactgaagatacg 6561693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9604854 - 9604903
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctc 50  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9604854 gttttgttgttgcctttctaaaccttgtttcagccccctctatctctctc 9604903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 11072717 - 11072644
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| | |||||||||||||||| ||||||||||| | |||||| |||| |||||||||||||||||||||    
T  11072717 agcacaagatatatttgaaacaaatcatttatattttttgcaacaatcttcttcatccatcaaattttgagtca 11072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 38890049 - 38889993
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagttt 57  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  38890049 ttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttt 38889993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38210380 - 38210291
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||   ||||||||||||  | |||| ||||||||| ||||    
T  38210380 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaa--atagcctgatacaaggcctatatttatagtaaaagt 38210291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 11066429 - 11066346
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    ||||||| |||| ||| ||||||||||||||||  | ||||||| | || ||||||||||||||||||||||||| ||| ||||    
T  11066429 aatattctctttaaaaatatatttgcatcaaatattccttcatatggtaaaaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10084636 - 10084722
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagta 86  Q
    |||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||||   | ||||||  |||||| |||||||||    
T  10084636 gttttgttattgcctttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagta 10084722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 11066329 - 11066255
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatattttt-agtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| | |||||||||||||||| ||||| ||||| || ||||||||||| ||||||||||||| |||||||    
T  11066329 agcacaagatatatttgaaacaaatcatttatcttttttagcaacaatattcttcatccatcaaattatgagtca 11066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30005851 - 30005801
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  30005851 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 30005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42990314 - 42990264
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  42990314 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 42990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 53974012 - 53974074
Alignment:
Q  195 tatatttgcatcaaatcgttctt-catacgatacaaaaatatatttattgtccataaatatat 256  Q
    ||||||||||||||||| | ||| |||||| ||||||||||||||||||||| ||||||||||    
T  53974012 tatatttgcatcaaatcttcctttcatacggtacaaaaatatatttattgtctataaatatat 53974074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10191556 - 10191649
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||| ||||||||||||||| ||||| | ||||||| |||||||||||||||||   | ||||||  |||||| ||||||||| ||||||    
T  10191556 gttttgttattgcctttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagtat 10191649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6063693 - 6063741
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  6063693 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctc 6063741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47149142 - 47149194
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaa 52  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  47149142 gttttgttgttgcctttctaaacccttgtttcagccccctctatctccctcaa 47149194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 54287487 - 54287559
Alignment:
Q  189 tcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    ||||| ||||||||||||||||  | ||||||||  ||||||||| |||||||| ||||||||||||| ||||    
T  54287487 tcaaaatatatttgcatcaaatattccttcatacagtacaaaaatgtatttattatccataaatatattttca 54287559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 54287576 - 54287627
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattct 312  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||| ||||    
T  54287576 agcacgaaatatatttgaaacaaatcttttatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1626930 - 1626976
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  1626930 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 1626976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3859538 - 3859492
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3859538 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 3859492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4308528 - 4308574
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  4308528 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 4308574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5191663 - 5191617
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5191663 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 5191617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5522862 - 5522908
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5522862 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 5522908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11163160 - 11163114
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  11163160 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 11163114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11170414 - 11170368
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  11170414 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 11170368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28102249 - 28102295
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  28102249 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 28102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28137542 - 28137588
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  28137542 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 28137588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35918196 - 35918242
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  35918196 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 35918242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43226096 - 43226050
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  43226096 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 43226050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43228301 - 43228255
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  43228301 gttttgttgttgcctttctaaactcttgtttcagccccctctatctc 43228255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45882949 - 45882903
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45882949 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 45882903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 11072800 - 11072731
Alignment:
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    ||||||||||||||||| | | | ||||| ||||||||| ||||| |||||||||||| ||| |||||||    
T  11072800 tatatttgcatcaaatcttccgtaatacggtacaaaaatctatttgttgtccataaatgtattttcagca 11072731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15780870 - 15780781
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    |||| |||||||  ||||||||  |||||| ||||||||| ||||||    
T  15780870 gttttgttgttgccattctaaacccttgtttcagccccctcta----tctccaagtttactctgatacaaggtctatatttatagtaaaagtat 15780781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18099417 - 18099465
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctc 48  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  18099417 gttttgttgttgccattctaaacccttgtttcagccccctctatctctc 18099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 50494009 - 50493961
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctc 48  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  50494009 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctc 50493961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 27000123 - 27000088
Alignment:
Q  304 caatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||||||||||||| ||||||||||    
T  27000123 caatattctccatccatcaaattttcagtcatacta 27000088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27101428 - 27101475
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctct 47  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  27101428 gttttgttgttgcctttctaaacccttgtttcagcctcctctatctct 27101475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48361918 - 48362006
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| | |||||||||||||||| ||||||| ||    ||||||||||||   |||||||  |||||| ||||||||| ||||||    
T  48361918 gttttgttgttgtcattctaaaccttgtttcagccccctgta----tctcaaagtttactatgatacaaggtctatatttatagtaaaagtat 48362006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 1321441 - 1321362
Alignment:
Q  11 tgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||| ||||||| ||||||||||||||    |||||||   |||||||| ||||||| ||||||||| ||||||    
T  1321441 tgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaagtctatatttatagtaaaagtat 1321362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6231459 - 6231413
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||    
T  6231459 gttttgttgttgcctttctaaatccttgtttcagcccgctctatctc 6231413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24979717 - 24979671
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  24979717 gttttgttgttgtctttctaaacccttgtttcagccccctctatctc 24979671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26720558 - 26720512
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||    
T  26720558 gttttgttgttgcctttctaaacccttatttcagccccctctatctc 26720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28100288 - 28100334
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  28100288 gttttgttgttgcttttctaaacccttgtttcagccccctctatctc 28100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32219105 - 32219059
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  32219105 gttttgttgttgcctttctgaacccttgtttcagccccctctatctc 32219059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32264286 - 32264332
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  32264286 gttttgttgttgcctttctaaacccttgtttgagccccctctatctc 32264332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35777431 - 35777385
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  35777431 gttttgttgttgcttttctaaacccttgtttcagccccctctatctc 35777385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43423710 - 43423756
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  43423710 gttttgttgttgcctttctaaacccttgtttcagccccctctttctc 43423756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47701842 - 47701888
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  47701842 gttttgttgttgcctttctaaacccttgtttcagccccctttatctc 47701888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51675002 - 51675048
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  51675002 gttttgttgttgtctttctaaacccttgtttcagccccctctatctc 51675048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51727253 - 51727299
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  51727253 gttttgttgttgcctttctaaacccttgtttcagccccctttatctc 51727299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10956274 - 10956319
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatct 45  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||    
T  10956274 gttttgttgttgccattctaaacccttgtttcagccccctctatct 10956319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10958570 - 10958615
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatct 45  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||    
T  10958570 gttttgttgttgccattctaaacccttgtttcagccccctctatct 10958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18097147 - 18097235
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||||||   |||||||   |||||||  |||||| ||||||||| ||||    
T  18097147 gttttgttgttgccattctaaacccttgtttgagccccctctatctctc---aagtttactatgatacaaggtctatatttatagtaaaagt 18097235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28761675 - 28761773
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| ||||||||| |||||||||  |||||||||    |||||| |||||  ||||| || ||||||| ||||||||| ||||||  ||||    
T  28761675 gttttgttgttgtctttctaaacccttgtttcaaccccctcta----tctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatccctca 28761770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 29956695 - 29956646
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    |||||||||||  |||||||||| ||||||| ||||||||||||||||||    
T  29956695 ttttgttgttgaatttctaaacccttgtttcagccccctctatctctctc 29956646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 23633427 - 23633359
Alignment:
Q  47 tctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaat 115  Q
    |||||| |||||  |||||||| ||||||| ||||||||| ||||||  |||||||  |||||||||||    
T  23633427 tctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaat 23633359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 15809305 - 15808967
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  15809305 gttttgttgttgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 15809206  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  15809205 taaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 15809107  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  15809106 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatattttta 15809007  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  15809006 gcaacaatattctccatccatcaaattttgagtcatacta 15808967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 3874096 - 3873755
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  3874096 gttttgttgttgtctttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaagtctatatttatagtaaaagtataactca 3873997  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnn-ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||||||||| |||| ||||||| |           |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  3873996 taaatttggaacaaataccacaccgaagatatgtttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatata 3873897  T
Q  199 tttgcatcaaatcgtt-cttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3873896 tttgcatcaaatcgtttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 3873797  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  3873796 tagcaacaatattctccatccatcaaattttgagtcatacta 3873755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 28283468 - 28283808
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  28283468 gttttgttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 28283567  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||  ||||||||||||||          |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||    
T  28283568 cataaatttggaacaaatattacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaatat 28283666  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28283667 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 28283766  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| || |||||||||||||||||||||||||||||||||||    
T  28283767 tagcaaaaatattctccatccatcaaattttgagtcatacta 28283808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 339
Target Start/End: Complemental strand, 43530209 - 43529876
Alignment:
Q  6 gttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataact 104  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||||||||   ||||||||  |||||| ||||||||| ||||||||||||||| |    
T  43530209 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactcataaat 43530110  T
Q  105 ttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgca 204  Q
    |||||| |||||| |||||||||||||           ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  43530109 ttggaataaataccacactgaagatac-ttttttttttctccttcagtgaaagaatattagcataaaaaatataatattccctttcaaaatatatttgca 43530011  T
Q  205 tcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaac 304  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||    
T  43530010 tcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaac 43529911  T
Q  305 aatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||||||||||    
T  43529910 aatattctccatccatcaaattttgagtcatacta 43529876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 42 - 339
Target Start/End: Complemental strand, 41382721 - 41382424
Alignment:
Q  42 atctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnn 141  Q
    |||| |||||| |||||  ||||| ||  |||||| ||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||||             
T  41382721 atctatctcaaggtttactctgattcaaggtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttt 41382622  T
Q  142 nctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttat 241  Q
     ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  41382621 tctcattcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatatttgcatcaaatcgttgttcatacggtacaaaaatatatttat 41382522  T
Q  242 tgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||| ||||| | |||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  41382521 tgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttaacaacaatattctccatccatcaaattttgagtcatacta 41382424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 71 - 339
Target Start/End: Complemental strand, 41384764 - 41384498
Alignment:
Q  71 gtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataa 170  Q
    |||||| ||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||||           ||||||| |||||||||||||||||||    
T  41384764 gtctatatttatagtaaaagtataactcataaatttggaacgaataccacactgaagatacgtttttttttt-tccttcaatgaaagaatatttgcataa 41384666  T
Q  171 aaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaag 270  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||     
T  41384665 aaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtataaaat 41384567  T
Q  271 atatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41384566 atattcgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 41384498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 2 - 339
Target Start/End: Complemental strand, 608819 - 608475
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc----aaagtttagcctgatacacagtctatctttatagtacaagtataac 96  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||||||    |||||||    ||||| |  |||||| |||| |||  || ||||||    
T  608819 ttttgttgttgcatttctaaacccttgtttcagccccctctatctctctctctcaaagtttgctatgatataaggtctatatttacagtgaaa-tataac 608721  T
Q  97 tcataactttggaacaaatacaacactgaagatacgnnnnnnnnnn---ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 193  Q
    |||||| |||||||||||||  |||| |||||||||             |||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  608720 tcataaatttggaacaaatatcacaccgaagatacgttcttttttttttctccttcagtgaaagaatatttgcataaaatatataatattctctttcaaa 608621  T
Q  194 ctatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttata 293  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  608620 atatatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 608521  T
Q  294 tttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||| ||||||||||| | ||||||||||||||||| ||||||    
T  608520 tttttagcaacaatattcttcttccatcaaattttgagtgatacta 608475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 186 - 339
Target Start/End: Complemental strand, 32339252 - 32339099
Alignment:
Q  186 ctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaat 285  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  32339252 ctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaat 32339153  T
Q  286 cttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32339152 cttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 32339099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 3265635 - 3265747
Alignment:
Q  227 caaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaatt 326  Q
    |||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  327 ttgagtcatacta 339  Q
    |||||||||||||    
T  3265735 ttgagtcatacta 3265747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32339395 - 32339263
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  32339395 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 32339296  T
Q  100 taactttggaacaaatacaacactgaagatacg 132  Q
    ||| |||||||||||||| ||||||||||||||    
T  32339295 taaatttggaacaaataccacactgaagatacg 32339263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 24873430 - 24873564
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc--tctcaaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  24873430 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 24873529  T
Q  98 cataactttggaacaaatacaacactgaagatacg 132  Q
    ||||| |||||||||||||||||||||||||||||    
T  24873530 cataaatttggaacaaatacaacactgaagatacg 24873564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 181623 - 181434
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||| |||||||| |||||| || ||||||| ||||||||||||||    ||||||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  181623 gttttattgttgccattctaagcccttgtttcagccccctctatctc----aaagtttagtctgatacaaagtctatatttatagtaaaagtataactca 181528  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 193  Q
    ||| |||||||| ||||| ||||||||||||||          |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  181527 taaatttggaacgaataccacactgaagatacgtttttttcttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 181434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15072796 - 15072707
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    ||||||||| ||||||||  |||||| ||||||||| ||||||    
T  15072796 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaggtctatatttatagtaaaagtat 15072707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3886167 - 3886256
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||   |||||||| ||||||| ||||||||| ||||||    
T  3886167 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaagtctatatttatagtaaaagtat 3886256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 13986304 - 13986374
Alignment:
Q  263 cacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| |||||| |||||||||||| |||||||||| |||||| |||| ||||||| |||||||||||||    
T  13986304 cacaaaatatatttaaaacaaatcttt-atatttttagcaacaatcttcttcatccataaaattttgagtca 13986374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13858733 - 13858831
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||| |||||||||  |||||||||    |||||| |||||  |||||||| ||||||| ||||||||| ||||||  ||||    
T  13858733 gttttgttgttgcctttctaaacccttgtttcatccccctcta----tctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctca 13858828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14419440 - 14419538
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||    |||||| |||||  ||||||||  |||||| ||||||||| |||||| |||||    
T  14419440 gtttttttgttgcctttctaaacccttgtttcagccccctcta----tctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcactca 14419535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12517273 - 12517321
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12517273 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctc 12517321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14807837 - 14807748
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  14807837 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 14807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 11701364 - 11701447
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||||||| ||| ||||||| |||||| || |||  |||||| |||||||||||||||| || |||||||||||| |||||||    
T  11701364 aatattccctttaaaaatatatttacatcaattc-ttc--catacggtacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 30679186 - 30679256
Alignment:
Q  263 cacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| |||| | ||||||||||||| ||||||||  |||| |||||| |||||||||||||||||||||    
T  30679186 cacaaaatatatctaaaacaaatcttttttatttttaccaaca-tattcttcatccatcaaattttgagtca 30679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4424104 - 4424058
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  4424104 gttttgttgttgcctttctaaatccttgtttcagccccctctatctc 4424058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5622987 - 5623033
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5622987 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 5623033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18810794 - 18810748
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  18810794 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 18810748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27107146 - 27107192
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  27107146 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 27107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27827072 - 27827026
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  27827072 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 27827026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27829383 - 27829337
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  27829383 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 27829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33541637 - 33541683
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  33541637 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 33541683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37214459 - 37214505
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37214459 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 37214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43082059 - 43082009
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  43082059 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctc 43082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44720929 - 44720883
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  44720929 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 44720883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36865624 - 36865579
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatct 45  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  36865624 gttttgttgttgcctttctaaacccttgtttcagccccctctatct 36865579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15068067 - 15067978
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||    |||||||||||||  |||||||  || ||| ||||||||| ||||||    
T  15068067 gttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttaggttgatacaaggtttatatttatagtaaaagtat 15067978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 26775284 - 26775241
Alignment:
Q  4 ttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  26775284 ttgttgttgcctttctaaacccttgtttcagccccctctatctc 26775241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1225252 - 1225206
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  1225252 gttttgttgttgtctttctaaacccttgtttcagccccctctatctc 1225206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14477362 - 14477316
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||    
T  14477362 gttttgttgttgcctttctaaacccttgtttcaaccccctctatctc 14477316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18812979 - 18812933
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  18812979 gttttgttgttgcctttctaaacccttgtttcagcctcctctatctc 18812933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22684905 - 22684955
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctc 50  Q
    |||||||||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  22684905 gttttgttgttgtctttctaaacccttgtttcagcctcctctatctctctc 22684955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 25952606 - 25952561
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||    
T  25952606 ttttattgttgcctttctaaacccttgtttcagccccctctatctc 25952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 35872632 - 35872673
Alignment:
Q  6 gttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccctctatctc 35872673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 3035761 - 3035420
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  3035761 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 3035662  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnn--ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||| |||||||||||||| | ||||||||||||            |||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  3035661 taaatttggaacaaataccatactgaagatacgttttttttctttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 3035562  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3035561 atttgcatcaaatcattcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 3035462  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  3035461 tagcaacaatattctccatccatcaaattttgagtcatacta 3035420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 11757269 - 11756930
Alignment:
Q  1 gttttgttgttgcctttctaaacc--ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactc 98  Q
    |||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||    
T  11757269 gttttgttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactc 11757170  T
Q  99 ataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    |||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11757169 ataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 11757071  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11757070 tttgcatcaaatagttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 11756971  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  11756970 agcaacaatattctccatccatcaaattttgagtcatacta 11756930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 20299499 - 20299160
Alignment:
Q  1 gttttgttgttgcctttctaaacc--ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactc 98  Q
    |||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||    
T  20299499 gttttgttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactc 20299400  T
Q  99 ataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    |||| | |||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  20299399 ataaatatggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 20299301  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  20299300 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatattttt 20299201  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  20299200 agcaacaatattctccatccatcaaattttgagtcatacta 20299160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 28487593 - 28487254
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||| | ||||||||||||    
T  28487593 gttttgttgttacctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacatggtctatatttataggaaaagtataactca 28487494  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| ||| |||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  28487493 taaatttagaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 28487394  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  28487393 ttgcatcaaatcattcttcatacgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatattttta 28487294  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  28487293 gcaacaatattctccatccatcaaattttgagtcatacta 28487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 18345581 - 18345242
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||| |||||||||||  |||||| ||||||||| ||||||||||||    
T  18345581 gttttgttgttgcctttctaaacccttgtttcaaccccctctatctccctcaaagttcagcctgatacaaggtctatatttatagtaaaagtataactca 18345482  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  18345481 taaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccatttcaaaatatat 18345382  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  18345381 ttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatattttta 18345282  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  18345281 gcaacaatattctccatccatcaaattttgagtcatacta 18345242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 38394026 - 38393688
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  38394026 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 38393927  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          | |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  38393926 taaatttggaacaaataccacactgaagatacgttatttttt-caccttcagtgaaagaatatttgcatcaaaaatataacattccctttcaaaatatat 38393828  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||| ||||||||||    
T  38393827 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatattttta 38393728  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||||||||||||||||||| || ||||||||    
T  38393727 gcaacaatattctccatccatcaaatttagaatcatacta 38393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 28485606 - 28485266
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  28485606 gttttgttgttgcctttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 28485507  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnc-tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||||||||| ||||||||||||||          | |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  28485506 taaatttggaacaaataccacactgaagatacgtgttttttttcctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 28485407  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  28485406 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatattttt 28485307  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||| ||||||||||||||||| ||||||||    
T  28485306 agcaacaatattcttcatccatcaaattttgaatcatacta 28485266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 20626078 - 20625739
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |  |||||| |||||| || |  |||||||||    
T  20626078 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaacatataactca 20625979  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  20625978 taaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatat 20625879  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20625878 ttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 20625779  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  20625778 gcaacaatattctccatccatcaaattttgagtcatacta 20625739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 20629969 - 20629630
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |  |||||| |||||| || |  |||||||||    
T  20629969 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaacatataactca 20629870  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  20629869 taaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatat 20629770  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20629769 ttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 20629670  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  20629669 gcaacaatattctccatccatcaaattttgagtcatacta 20629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 20642388 - 20642049
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |  |||||| |||||| || |  |||||||||    
T  20642388 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataaacatataactca 20642289  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  20642288 taaatttggaacgaataccacactgaagatacgtttttttttgctccttcagtgaaaaaatatttgcatcaaaaatataatattccctttcaaaatatat 20642189  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  20642188 ttgtatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 20642089  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  20642088 gcaacaatattctccatccatcaaattttgagtcatacta 20642049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 3 - 339
Target Start/End: Original strand, 7094673 - 7095010
Alignment:
Q  3 tttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcata 101  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||   ||||||||  |||||| |||||| || |  |||||||||||    
T  7094673 tttgttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaacatataactcata 7094772  T
Q  102 actttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatattt 201  Q
    | |||||||| ||||| ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  7094773 aatttggaacgaataccacactgaagatacgtttttttttcctccttcagtgaaagaatatttgcataaaaaatataatatttcctttcaaaatatattt 7094872  T
Q  202 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||     
T  7094873 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagc 7094972  T
Q  302 aacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7094973 aacaatattctccatccatcaaattttgagtcatacta 7095010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7472229 - 7472569
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||  |||||| ||||||||| |  |||||||||    
T  7472229 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactca 7472328  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnn-ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||||||||| ||||||||||||||           |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  7472329 taaatttggaacaaataccacactgaagatacgtttttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 7472428  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  7472429 tttgcatcaaatcgttcttcatatgatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 7472528  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  7472529 agcaacaatattctccatccatcaaattttgagtcatacta 7472569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 339
Target Start/End: Original strand, 7092426 - 7092763
Alignment:
Q  3 tttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcata 101  Q
    |||||||||| | ||||||||| ||||||| |||||||| ||||||||||||||||   ||||||||  |||||| ||||||||| |  |||||||||||    
T  7092426 tttgttgttgtcattctaaacccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagtaaacatataactcata 7092525  T
Q  102 actttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatattt 201  Q
    | |||||||| ||||| |||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  7092526 aatttggaacgaataccacactgaagatacaattttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatattt 7092625  T
Q  202 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||     
T  7092626 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagc 7092725  T
Q  302 aacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7092726 aacaatattctccatccatcaaattttgagtcatacta 7092763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7351901 - 7352241
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||  || ||| ||||||||| ||||||||||    
T  7351901 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagtaaaagtataact 7352000  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||  ||||||||||||||          ||| |||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  7352001 cataaatttggaacaaatatcacactgaagatacgttttttttt-ctcattcagtgaaagaatatttgcctcaaaaatataatattccctttcaaaatat 7352099  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  7352100 atttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttt 7352199  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| |||||||||||||||||||||| |||||||||||||||    
T  7352200 tagcaacaatattctccatccatcaatttttgagtcatacta 7352241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7470271 - 7470616
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||  |||||| ||||||||| |  |||||||||    
T  7470271 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaacatataactca 7470370  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnn------ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 193  Q
    ||| |||||||| ||||| ||||||||||||||                |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  7470371 taaatttggaacgaataccacactgaagatacgtttttttttttcttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaa 7470470  T
Q  194 ctatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttata 293  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  7470471 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgttttata 7470570  T
Q  294 tttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  7470571 tttttagcaataatattctccatccatcaaattttgagtcatacta 7470616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 7349522 - 7349862
Alignment:
Q  1 gttttgttgttgcctttctaaacct-tgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  7349522 gttttgttgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 7349621  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||  ||||||||||||||          ||| |||||||||||||||||||| | ||||||||||||||| |||||||| |||    
T  7349622 cataaatttggaacaaatatcacactgaagatacgttttttttt-ctcattcagtgaaagaatatttgcctcaaaaatataatattctctttcaaaatat 7349720  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  7349721 atttgcatcaaatcgttcttcatgcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttt 7349820  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| |||||||||||||||||||||| |||||||||||||||    
T  7349821 tagcaacaatattctccatccatcaatttttgagtcatacta 7349862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 38 - 339
Target Start/End: Complemental strand, 38396292 - 38395991
Alignment:
Q  38 ctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnn 137  Q
    |||| ||||||||||| ||||||||||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||         
T  38396292 ctctctctctctcaaaatttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttttt 38396193  T
Q  138 nnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatat 237  Q
         |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38396192 tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatat 38396093  T
Q  238 ttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatac 337  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  38396092 ttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatac 38395993  T
Q  338 ta 339  Q
    ||    
T  38395992 ta 38395991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 31156160 - 31156495
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    |||||||  | |||||||   ||||| ||||||||| ||||||| ||||    
T  31156160 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttgccttgatacaagctctatatttatagtaaaagtatagctca 31156255  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||| ||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  31156256 taaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 31156355  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  31156356 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattttta 31156455  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||||||||||||||| |||||||||||||||    
T  31156456 gcaacaatattctccatccatcaatttttgagtcatacta 31156495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 38 - 339
Target Start/End: Complemental strand, 1849971 - 1849670
Alignment:
Q  38 ctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnn 137  Q
    |||| |||||||||||||||    ||| |||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||         
T  1849971 ctctctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttt 1849872  T
Q  138 nnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatat 237  Q
         |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  1849871 tttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccttcatacgatacaaaaatatat 1849772  T
Q  238 ttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatac 337  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  1849771 ttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatac 1849672  T
Q  338 ta 339  Q
    ||    
T  1849671 ta 1849670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 62 - 339
Target Start/End: Complemental strand, 1606452 - 1606176
Alignment:
Q  62 tgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaata 161  Q
    |||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||          |||||||||||||||||||    
T  1606452 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagattcgttttttttt-ctccttcagtgaaagaata 1606354  T
Q  162 tttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1606353 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttca 1606254  T
Q  262 gcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  1606253 gcacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 1606176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 42331248 - 42331588
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||||||||||||||    ||||||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  42331248 gttttgttgttgtcattctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaagtctatatttatagtaaaagtataactca 42331343  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnn-----ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaac 194  Q
    ||| |||||||| ||||| ||||| ||||||||               |||||||| ||||||||||||||||| ||||||||||||||||||||||||     
T  42331344 taaatttggaacgaataccacactaaagatacgtttttttttttctttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaa 42331443  T
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatat 294  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  42331444 tatatttgcatcaaatcgttcttcatacggtacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatat 42331543  T
Q  295 ttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| ||||||||||| ||| ||||||||||| ||||||||||    
T  42331544 ttttagcaacaatattcttcattcatcaaattttaagtcatacta 42331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 78 - 339
Target Start/End: Original strand, 21470618 - 21470878
Alignment:
Q  78 tttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatat 177  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||          |||||||||||||||||||||||||| ||||||||    
T  21470618 tttatagtaaaagtataactcataaatttggaacaaataccacaccgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatat 21470716  T
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttg 277  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21470717 aatattccctttcaaaatatattcgcatcaaatcgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 21470816  T
Q  278 aaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  21470817 aaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcaaacta 21470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 37412377 - 37412711
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||| ||||||| ||||||     | |||||  ||||| ||  |||||| ||||||||| || |||||||||    
T  37412377 gttttgttgttgccattctaaacccttgtttcagccccctatatctcc----aggtttactctgattcaaggtctatatttatagtaaaaatataactca 37412472  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||  ||||||||||||||          ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  37412473 taaatttggaacgaataacacactgaagatacgttttttttt-ctccttcagtggaagaatatttgcatcaaaaatataatattccctttcaaaatatat 37412571  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||| ||||||||||| |||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37412572 ttgcatcaaatcattcttcatacgttacataattatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 37412671  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  37412672 gcaacaatattctccatccatcaaattttgagtcatacta 37412711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 144 - 339
Target Start/End: Complemental strand, 47865528 - 47865333
Alignment:
Q  144 tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 243  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47865528 tccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattg 47865429  T
Q  244 tccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  47865428 tccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttggagtcatacta 47865333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 71 - 339
Target Start/End: Complemental strand, 21990124 - 21989858
Alignment:
Q  71 gtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataa 170  Q
    |||||| ||||||||| || |||||||||||| |||||||| ||||| |||| |||||||||          |||||||||||||||||||||||||| |    
T  21990124 gtctatatttatagtaaaattataactcataaatttggaacgaataccacacagaagatacgtttttttttcctccttcagtgaaagaatatttgcatca 21990025  T
Q  171 aaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaag 270  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||| ||     
T  21990024 aaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttca--acacaat 21989927  T
Q  271 atatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21989926 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgggtcatacta 21989858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 143 - 336
Target Start/End: Complemental strand, 24258358 - 24258166
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 242  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||||||    
T  24258358 ctccttcagtgaaagaatatttacatcaaaaatataatattccctttcaaaatatatttgcatcaa-tcgtccttcatactgtacaaaaatatatttatt 24258260  T
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcata 336  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  24258259 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaattttgagtcata 24258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 20297402 - 20297163
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  ||| || ||| ||||| |||||||||||     
T  20297402 gttttattgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtccatatttttagtaaaagtataactcg 20297303  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  20297302 taaatttggaacaaataccacactgaagatacgttttttttt-ctccttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 20297204  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatattta 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20297203 ttgcatcaaatcgttcttcatacgatacaaaaatatattta 20297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 43253765 - 43254027
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccct----ctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataa 95  Q
    |||||||||||| | ||||||| ||||||||| |||| ||    || ||||||||||||||||||||||||||  |||||| ||||||||| ||||||||    
T  43253765 gttttgttgttgtcattctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataa 43253864  T
Q  96 ctcataactttggaacaaatacaacactgaagatacgnnnnnnnnnn--ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 193  Q
    ||||||| |||||||||||||| |||| ||||||||             |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43253865 ctcataaatttggaacaaataccacaccgaagatactttcttattttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaa 43253964  T
Q  194 ctatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 256  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43253965 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 43254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 13099725 - 13099996
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| |||||||  |||||||||||||    || |||||   |||| ||  |||||| ||||||||| ||||||||||||    
T  13099725 gttttgttgttgccattctaaacccttgtttcaaccccctctatctc----aaggtttactttgattcaaggtctatatttatagtaaaagtataactca 13099820  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  13099821 taaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 13099920  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatt 275  Q
    ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  13099921 ttgtatcaaatcgttcttcatacggtacgaaaatatatttattgtccataaatatattttcagcacaaaatatatt 13099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 443474 - 443331
Alignment:
Q  196 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatt 295  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  443474 atatttgcatcaaattgttcttcagacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatt 443375  T
Q  296 tttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  443374 tttagcaacaatattctccatccatcaaattttgagtcatacta 443331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 72 - 339
Target Start/End: Complemental strand, 3677252 - 3677002
Alignment:
Q  72 tctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacg--nnnnnnnnnnctccttcagtgaaagaatatttgcata 169  Q
    ||||| ||||||||| ||  ||||||||||| |||||||| ||||  ||||||||||||||            ||||||||||||||||||||||||||     
T  3677252 tctatatttatagtaaaaacataactcataaatttggaacgaatatcacactgaagatacgttttttttttctctccttcagtgaaagaatatttgcatc 3677153  T
Q  170 aaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaa 269  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||                   ||||||||||||    
T  3677152 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatt-------------------ttcagcacaaaa 3677072  T
Q  270 gatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
     |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3677071 tatatttgaaacaaatcttttatatttttagcaacaatattctccatctatcaaattttgagtcatacta 3677002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 40281862 - 40281987
Alignment:
Q  216 ttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaa--tattctc 313  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||| |||||  | ||||     
T  40281862 ttcatacggtacaaaaatatatttattttccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaaattcttctt 40281961  T
Q  314 catccatcaaattttgagtcatacta 339  Q
    ||||||||||||||||||||||||||    
T  40281962 catccatcaaattttgagtcatacta 40281987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 48457693 - 48457608
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagt 85  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  48457693 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagt 48457608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 20297161 - 20297108
Alignment:
Q  281 caaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagtca 20297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 443635 - 443507
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||  || |||||||||||    || |||||  ||||| || ||||||| ||||||||| ||||||||||||    
T  443635 gttttgttgttgccattctaaaccattgttttagctccctctatctc----aaggtttactctgattcaaagtctatatttatagtaaaagtataactca 443540  T
Q  100 taactttggaacaaatacaacactgaagatacg 132  Q
    ||| |||||||| ||| | ||||||||||||||    
T  443539 taaatttggaacgaattccacactgaagatacg 443507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 10690756 - 10690684
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| |||||||||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  10690756 agcacaaaatatatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagtca 10690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27306478 - 27306567
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    ||||||||||||  ||||||||  |||||| ||||||||| ||||||    
T  27306478 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaaagtat 27306567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 43254023 - 43254069
Alignment:
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcata 336  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgagacata 43254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40946368 - 40946311
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagttt 57  Q
    |||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||    
T  40946368 gttttgttgttgcctttctaaacccttgtttcagccccctctgtccctctcaaagttt 40946311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44604 - 44515
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  44604 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 44515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9680859 - 9680772
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagttta-gcctgatacacagtctatctttatagta 86  Q
    |||||||||||||| ||||||||| |||||||  ||||||||||||||||||| |||||   ||||||||  |||||| |||||||||    
T  9680859 gttttgttgttgcccttctaaacccttgtttcaaccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagta 9680772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 24258502 - 24258375
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcat 100  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||    || |||||  |||||||| |  |||| ||||||| | || ||||||||||    
T  24258502 ttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aatgtttactctgatacaaaacctatatttatag-agaaatataactcat 24258408  T
Q  101 aactttggaacaaata-ca-acactgaagatac 131  Q
    || |||||||| |||| || |||||||||||||    
T  24258407 aaatttggaacgaatatcacacactgaagatac 24258375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1049544 - 1049590
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  1049544 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 1049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1850021 - 1849971
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  1850021 gtttttttgttgcctttctaaacccttgtttcagccccctctatctctctc 1849971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9679099 - 9679041
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagttta 58  Q
    |||||||||||| | ||||| | ||||||||| ||||||||||||||||||||||||||    
T  9679099 gttttgttgttgtcattctagatccttgtttcagccccctctatctctctcaaagttta 9679041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11355298 - 11355252
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  11355298 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 11355252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 12310442 - 12310528
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||| ||| ||| ||||||| ||||||||| | ||||||||| |||||||||||||| | ||||| ||| ||||  |||||||    
T  12310442 aatattccttttaaaaatatatttacatcaaatcttccttcatacggtacaaaaatatattaactgtccttaagtataatttcagca 12310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 12310542 - 12310608
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattt 327  Q
    ||||||||| ||||||||||||||||||||||||   ||| |||||| |||| ||||||| ||||||    
T  12310542 agcacaaaatatatttgaaacaaatcttttatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20137358 - 20137404
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  20137358 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 20137404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21680067 - 21680021
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  21680067 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 21680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22828882 - 22828928
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  22828882 gttttgttgttgcctttctaaactcttgtttcagccccctctatctc 22828928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26804609 - 26804563
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  26804609 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 26804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3878617 - 3878569
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctc 48  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  3878617 gttttgttgttgtctttctaaacccttgtttcagccccctctatctctc 3878569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18567653 - 18567564
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||    ||||||||||||  ||||||||   ||||| ||||||||| ||||||    
T  18567653 gttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttactctgatacaagatctatatttatagtaaaagtat 18567564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31435296 - 31435385
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||    ||||||||||||  ||||||||   ||||| ||||||||| ||||||    
T  31435296 gttttgttgttgcctttctaaacccttgtttcagccccttcta----tctcaaagtttactctgatacaagatctatatttatagtaaaagtat 31435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 7188560 - 7188472
Alignment:
Q  23 ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaat 115  Q
    ||||||||| ||||||||||||||    || |||||  |||||||| ||||||| ||||||||| ||||||  |||||||  |||||||||||    
T  7188560 ccttgtttcagccccctctatctc----aaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaat 7188472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 12484976 - 12485023
Alignment:
Q  217 tcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||||||||||||||||||  | ||||||||||||| |||||||    
T  12484976 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 12506407 - 12506454
Alignment:
Q  217 tcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||||||||||||||||||  | ||||||||||||| |||||||    
T  12506407 tcatacgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1047173 - 1047223
Alignment:
Q  1 gttttgttgttgcctttctaaacct-tgtttccgccccctctatctctctc 50  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||||||||||    
T  1047173 gttttgttgttgcttttctaaacccctgtttcagccccctctatctctctc 1047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21678106 - 21678060
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  21678106 gttttgatgttgcctttctaaacccttgtttcagccccctctatctc 21678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22251791 - 22251837
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  22251791 gttttgttgttgcctttctaaactcttgtttcagcctcctctatctc 22251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38396356 - 38396306
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctc 50  Q
    |||||||||||||||||||||| ||||||||| ||||||||  ||||||||    
T  38396356 gttttgttgttgcctttctaaacccttgtttcagccccctccctctctctc 38396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44724619 - 44724573
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  44724619 gttttgttgttgcctttctaaacccttgtttcagccccctatatctc 44724573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 21592393 - 21592438
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||    
T  21592393 ttttgttgttgcatttctaaacctttgtttcagccccctctatctc 21592438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35669 - 35580
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| |||||| |||| ||||||| ||||||||||    |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  35669 gttttgttgttgtctttctgaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 35580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 18469041 - 18468703
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | |||||||  |||||| ||||||||| ||||||||||||    
T  18469041 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagtataactca 18468942  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| |||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18468941 taaatttggaacaaataccacactgaagatac-tttttattttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 18468843  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  18468842 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 18468743  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | || |||||||||||||||||||||||||||||||||||    
T  18468742 gcaaaaatattctccatccatcaaattttgagtcatacta 18468703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 27910480 - 27910140
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataactc 98  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||  |||||||| |||||||||  |||||| ||||||||| |||||||||||    
T  27910480 gttttgttgttgcctttttaaaccttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagtaaaagtataactc 27910381  T
Q  99 ataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    |||| |||||||||||||| |||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  27910380 ataaatttggaacaaataccacactgaagatactttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 27910281  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27910280 tttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 27910181  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || || |||||||||||||||||||||||||||||||||||    
T  27910180 agcaataatattctccatccatcaaattttgagtcatacta 27910140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 27912566 - 27912224
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  27912566 gttttgttgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 27912467  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnn-ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaacta 196  Q
    ||||| |||||||||||||  ||||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  27912466 cataaatttggaacaaatatcacactgaagatacgtttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaata 27912367  T
Q  197 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattt 296  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  27912366 tatttgcatcaaatcgtttttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattt 27912267  T
Q  297 ttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  27912266 ttagcaacaatattctccatccatcaaattttgagtcatacta 27912224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 10586872 - 10586549
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  10586872 gttttgttgttgccattctaaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 10586774  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10586773 taaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 10586674  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  10586673 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 10586574  T
Q  300 gtaacaatattctccatccatcaaa 324  Q
    | |||||||||| ||||||||||||    
T  10586573 gcaacaatattccccatccatcaaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 25804055 - 25803712
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctca-----aagtttagcctgatacacagtctatctttatagtacaagtata 94  Q
    |||||||||||||| ||||||||| ||||||  ||||||||||||||||||      || ||||||||||||||  |||||| ||||||||| |||||||    
T  25804055 gttttgttgttgccattctaaacccttgtttgagccccctctatctctctctctctcaaatttagcctgatacaaggtctatatttatagtaaaagtata 25803956  T
Q  95 actcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaac 194  Q
    |||||||| |||||||||||||  ||||||||||||||          |||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  25803955 actcataaatttggaacaaatattacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 25803857  T
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatat 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25803856 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 25803757  T
Q  295 ttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  25803756 ttttagcaacaatattctccatccatcaaattttgagtcatacta 25803712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 15552275 - 15551930
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc------aaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||||| |||||||||| ||||||| | ||||||||||||||||      ||||||||||||||||||  |||||| ||||||||| ||||||    
T  15552275 gttttgttgttgcttttctaaacccttgtttcagtcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 15552176  T
Q  94 aactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 193  Q
    ||||||||| |||||||||||||| || |||||||||||          |||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  15552175 aactcataaatttggaacaaataccacgctgaagatacgttttttttttctccttcagtgaaagaatatttgcatcaaaaatgtcatattccctttcaaa 15552076  T
Q  194 ctatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttata 293  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  15552075 atatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttata 15551976  T
Q  294 tttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  15551975 tttttagcaacaatattctccatccatcaaattttgagtcatacta 15551930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 62 - 339
Target Start/End: Original strand, 3373348 - 3373625
Alignment:
Q  62 tgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaata 161  Q
    |||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||          |||||||||||||| ||||    
T  3373348 tgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaaaaata 3373447  T
Q  162 tttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3373448 tttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttca 3373547  T
Q  262 gcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  3373548 gcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattctgagtcatacta 3373625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 18511461 - 18511797
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||||||||||||||||  ||||||||| ||||||||  |||||| |||||| || |  |||||||||    
T  18511461 gttttgttgttgtcattctaaacccttgtttcagccccctctatctctc--aaagtttagtctgatacaaggtctatatttatattaaacatataactca 18511558  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||| ||||||||          |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  18511559 taaatttggaacgaataccacactaaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatatttcctttcaaaatatat 18511657  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  18511658 ttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatattttta 18511757  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||| ||||||||||||||||||||||||||    
T  18511758 gcaacaatattcttcatccatcaaattttgagtcatacta 18511797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 18509567 - 18509902
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||||| ||||||||||  ||||||||| ||||||||  |||||| ||||||||| |  |||||||||    
T  18509567 gttttgttgttgtcattctaaacccttgtttcagcccc-tctatctctc--aaagtttagtctgatacaaggtctatatttatagtaaacatataactca 18509663  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| ||||| |  ||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18509664 taaatttgggatgaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 18509762  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  18509763 ttgcatcaaatcattcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatattttta 18509862  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  18509863 gcaacaatattctccatccatcaaattttgagtcatacta 18509902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 26097763 - 26097426
Alignment:
Q  1 gttttgttgttgcctttctaaaccttg-tttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||    ||||||||  ||||| ||  |||||| ||||||||| ||||||||||||    
T  26097763 gttttgttgttgccattctaaacctttatttcagccccctctatctc----aaagtttactctgattcaaggtctatatttatagtaaaagtataactca 26097668  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctt--tcaaactat 197  Q
    ||| |||||||| ||||| |||||||||||||           |||||||||||||||||||||||||| |||||||||| ||| ||||  ||||| |||    
T  26097667 taaatttggaacgaataccacactgaagatacatttttttttcctccttcagtgaaagaatatttgcatcaaaaatataacatttccttcttcaaaatat 26097568  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||||    
T  26097567 atttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttatatttt 26097468  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  26097467 tagcaacaatattctccatccatcaaattttgagtcatacta 26097426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 18466714 - 18466461
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| || |||||||||    
T  18466714 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaaatataactca 18466615  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| |||||||||||||           |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18466614 taaatttggaacaaataccacactgaagatac---ttttttttctcctttagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 18466518  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18466517 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 18466461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 71 - 339
Target Start/End: Original strand, 26098567 - 26098836
Alignment:
Q  71 gtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnn-ctccttcagtgaaagaatatttgcata 169  Q
    |||||| ||||||||| |||||||||||||||  ||||||| ||||| ||| ||||||||||           |||||||| ||||||||| |||| ||     
T  26098567 gtctatatttatagtaaaagtataactcataaaattggaacgaataccacattgaagatacgtttttttatttctccttcaatgaaagaatttttgtatc 26098666  T
Q  170 aaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaa 269  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  26098667 aaaaatataatattccctttcaaaatatatttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaa 26098766  T
Q  270 gatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
     |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  26098767 tatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatacta 26098836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18596675 - 18596334
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcat 100  Q
    |||||||||||| |||| ||  ||||||||| |||||||||||| |    || |||||  ||||| ||  |||||| ||||||||| |||||||||||||    
T  18596675 gttttgttgttgtctttatac-ccttgtttcagccccctctatccc----aaggtttactctgattcaaggtctatatttatagtaaaagtataactcat 18596581  T
Q  101 aactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatt 200  Q
    || |||||||| ||||| ||||||||||||||          |||||||||||| |||||||||| || ||||||||||||||| |||||||| ||||||    
T  18596580 aaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgatagaatatttgtatcaaaaatataatattctctttcaaaatatatt 18596481  T
Q  201 tgcatcaaatcgttcttcatacgatacaaaaatatatttat-----------tgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttt 289  Q
    ||||||||||||||||| ||||| |||||||||||||||||           ||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  18596480 tgcatcaaatcgttctttatacggtacaaaaatatatttatggtatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttt 18596381  T
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcata 336  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  18596380 tatatttttagcaacaatattctccatccatcaaattttgagtcata 18596334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 161 - 339
Target Start/End: Complemental strand, 21288713 - 21288534
Alignment:
Q  161 atttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgataca-aaaatatatttattgtccataaatatatgtt 259  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||| ||    
T  21288713 atttgcatcaaaaatataatattccctttcaaaatatatttgcataaaatcgttcttcatacggtaccgaaaatatatttattgtccataaatatatttt 21288614  T
Q  260 cagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  21288613 cagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaattttgagttatacta 21288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 195 - 337
Target Start/End: Original strand, 17415751 - 17415893
Alignment:
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatat 294  Q
    ||||||||||||||||  | ||||||||  |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  17415751 tatatttgcatcaaattttccttcatacagtacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatat 17415850  T
Q  295 ttttagtaacaatattctccatccatcaaattttgagtcatac 337  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  17415851 ttttagcaacaatattcttcatccatcaaattttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 6661929 - 6662028
Alignment:
Q  240 attgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||| ||||||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 15143373 - 15143270
Alignment:
Q  146 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtc 245  Q
    ||||||||||||||||||||||| |||       |||||||||||||| ||||||||||||||||| | ||||||| | ||||||||| |||||||||||    
T  15143373 cttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaatcttccttcatatggtacaaaaatgtatttattgtc 15143281  T
Q  246 cataaatatat 256  Q
    |||||||||||    
T  15143280 cataaatatat 15143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 40221361 - 40221287
Alignment:
Q  265 caaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatacta 40221287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4410091 - 4410006
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagt 85  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||   ||||||||  |||||| ||||||||    
T  4410091 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagt 4410006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 15143274 - 15143224
Alignment:
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcatactat 340  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatactat 15143224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 5779144 - 5779217
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||| |||| |||| |||||||||| |||||    
T  5779144 agcacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaattttaagtca 5779217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 18466465 - 18466416
Alignment:
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatacta 18466416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 40221408 - 40221340
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatc 211  Q
    ||||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | ||||||    
T  40221408 ctcctgcagtgaaagaatatttgcatcaaaaatataatattccttttcaaaatatatttgaaacaaatc 40221340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1189858 - 1189945
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctctctcaaagttta-gcctgatacacagtctatctttatagta 86  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||   ||||||||  |||||| |||||||||    
T  1189858 gttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagta 1189945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21684700 - 21684797
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctcta------tctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||      ||||||||||||||||||||||||||  |||||| ||||||||| ||||    
T  21684700 gttttgttgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 21684797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34477303 - 34477353
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctc 50  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  34477303 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 34477353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34479668 - 34479718
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctc 50  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  34479668 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctc 34479718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2818585 - 2818674
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  2818585 gttttgttgttacctttctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 2818674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2174949 - 2174903
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2174949 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 2174903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20043080 - 20043034
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  20043080 gttttgttgttgcctttctaaacacttgtttcagccccctctatctc 20043034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31542765 - 31542719
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31542765 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 31542719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 41585998 - 41586083
Alignment:
Q  47 tctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacg 132  Q
    |||||| |||||  |||||||| |  |||| ||||||||| ||||||||||||||  |||||||| ||||| | ||||||||||||    
T  41585998 tctcaaggtttactctgatacaaaacctatatttatagtaaaagtataactcatagatttggaacgaataccagactgaagatacg 41586083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25921722 - 25921811
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||    |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  25921722 gttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 25921811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6747336 - 6747289
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctct 47  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  6747336 gttttgttgttgcttttctaaacccttgtttcagccccctctatctct 6747289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 16092450 - 16092497
Alignment:
Q  2 ttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||    
T  16092450 ttttgttgttgcctttctaaacccttgtttcaaccccctctatctctc 16092497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 20507712 - 20507800
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||| |||||||||||||||||| ||||||| ||||||||||    ||||||||||||  ||||||||   ||||| ||||||||| ||||||    
T  20507712 tttttttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaagatctatatttatagtaaaagtat 20507800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4236659 - 4236613
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||    
T  4236659 gttttgttgttgcctttctaaactcttgtttcagccccctttatctc 4236613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6745099 - 6745049
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctctctc 50  Q
    ||||||||||||| ||||||||| |||||||| ||||||| ||||||||||    
T  6745099 gttttgttgttgcttttctaaacacttgtttcagccccctttatctctctc 6745049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6756524 - 6756478
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||    
T  6756524 gttttgttgttgcctttctaaaccattgtttcagctccctctatctc 6756478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16776188 - 16776142
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  16776188 gttttgttgttgcctttgtaaacccttgtttcagccccctctatctc 16776142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17072913 - 17072867
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  17072913 gttttgttgttgtctttctaaacccttgtttcagccccctctatctc 17072867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25904133 - 25904087
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  25904133 gttttgttgttgtctttctaaacccttgtttcagccccctctatctc 25904087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31179620 - 31179666
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||    
T  31179620 gttttgttgttgcctttctaaacccttgtttcagctccctctatctc 31179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31472862 - 31472908
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  31472862 gttttgttgttgcctttctaaacccttgttttagccccctctatctc 31472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31545110 - 31545064
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  31545110 gttttgttgttgcctttctaaacccttgtttcagccccctttatctc 31545064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34530915 - 34530961
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  34530915 gttttgttgttgcatttctaaacacttgtttcagccccctctatctc 34530961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 10474574 - 10474615
Alignment:
Q  3 tttgttgttgcctttctaaa-ccttgtttccgccccctctat 43  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  10474574 tttgttgttgcctttctaaatccttgtttcagccccctctat 10474615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12556172 - 12556261
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| | ||||||||| || |||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  12556172 gttttgttgttgtcattctaaacccttatttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 12556261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40221552 - 40221426
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||    |||||| |||||  ||||  ||  |||||| ||||||||| |||  |||||||    
T  40221552 gttttgttgttgccattctaaacccttgtttcagccccctcta----tctcaaggtttactctgagtcaatgtctatatttatagtaaaag--taactca 40221459  T
Q  100 taactttggaacaaatacaacactgaagatacg 132  Q
    ||| ||| ||||  |||  ||||||||||||||    
T  40221458 taaatttagaacggatatcacactgaagatacg 40221426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 31735772 - 31736110
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||  ||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  31735772 gttttgttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 31735871  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  31735872 taaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 31735970  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  31735971 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 31736070  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  31736071 gcaacaatattctccttccatcaaattttgagtcatacta 31736110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 47906300 - 47905961
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  47906300 gttttgttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 47906201  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||| |||||||||||||           |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||    
T  47906200 cataaatttggaacaaataccacactgaagatac--tttttttttctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 47906103  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  47906102 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 47906003  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  47906002 tagcaacaatattctccatccatcaaattttgagtcatacta 47905961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 9463495 - 9463835
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  9463495 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 9463594  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||| ||| ||||||||||          |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||    
T  9463595 cataaatttggaacaaataccacaatgaagatacgttttttttt-ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 9463693  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  9463694 atttgcattaaattgttcttcatacgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 9463793  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  9463794 tagcaacaatattctccatccatcaaattttgagtcatacta 9463835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 27337189 - 27337527
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||  |||||| ||||||||| ||||||||| ||    
T  27337189 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataacgca 27337288  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| |||  |||||||||           ||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  27337289 taaatttggaacaaataccacatcgaagatacgtttttttttt-tccttcagttaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 27337387  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  27337388 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttatatattttta 27337487  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||| ||||||||||||||| |||||||||||    
T  27337488 gcaacaatattccccatccatcaaatttggagtcatacta 27337527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 9459668 - 9460008
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  9459668 gttttgttgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 9459767  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||||| |||||||||||||| ||| ||||||||||          |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||    
T  9459768 cataaatttggaacaaataccacaatgaagatacgttttttttt-ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatat 9459866  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    |||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  9459867 atttgcattaaattgttcttcatacggtataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 9459966  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  9459967 tagcaacaatattctccatccatcaaattttgagtcatacta 9460008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 24325693 - 24325352
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctc----aaagtttagcctgatacacagtctatctttatagtacaagtataac 96  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||    |||||||   ||||||||  |||||| ||||||||| |||||||||    
T  24325693 gttttgttgttgcctttctaacccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataac 24325594  T
Q  97 tcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaacta 196  Q
    |||||| |||||||||||||| ||||| |||||||           |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||    
T  24325593 tcataaatttggaacaaataccacactaaagatac-atttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcactttcaaaata 24325495  T
Q  197 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattt 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  24325494 tatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattt 24325395  T
Q  297 ttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  24325394 ttagcaacaatattctccatccatcaaattttgagtcatacta 24325352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 27339381 - 27339725
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||| ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||||  |||||| ||||||||| ||||||||||||    
T  27339381 gttttattgttgcctttctaagcccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataactca 27339480  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnct-ccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||||||||| ||||||||||||||           | |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  27339481 taaatttggaacaaataccacactgaagatacgttcttttttttttccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 27339580  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataa----atatatgttcagcacaaaagatatttgaaacaaatcttttatat 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||||||||| ||||||||||||||||||||||||    
T  27339581 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatcttttatat 27339680  T
Q  295 ttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||    
T  27339681 ttttagcaacaatattctccatccgtcaaatttggagtcatacta 27339725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 39932103 - 39931767
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||| | || |||||  |||||| ||||||||| |  |||||||||    
T  39932103 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctc--aaagttttgtctcatacaaggtctatatttatagtaaacatataactca 39932006  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||| | ||||||||||||||| |||| ||||||||||||||||||| |||||    
T  39932005 taaatttggaacgaatactacactgaagatacgttttttttt-ctccttcaataaaagaatatttgcatcaaaagtataatattccctttcaaaatatat 39931907  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  39931906 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 39931807  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  39931806 gcaacaatattctccatccatcaaattttgagtcatacta 39931767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 21948438 - 21948756
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||  |||||| ||||||||| |  |||||||||    
T  21948438 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaacatataactca 21948537  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnc-tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||| ||||| ||||||||||||||          | |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21948538 taaatttggaacgaataccacactgaagatacgttttttttttcctccttctgtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 21948637  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  21948638 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 21948737  T
Q  299 agtaacaatattctccatc 317  Q
    || ||||||||||||||||    
T  21948738 agcaacaatattctccatc 21948756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 15295085 - 15295434
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc----------aaagtttagcctgatacacagtctatctttatagtacaa 89  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||          |||||||   ||||||||  |||||| ||||||||| |     
T  15295085 gttttgttgttgcctttctaaacccttgtttcagccctctctatctctctctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaac 15295184  T
Q  90 gtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattcccttt 189  Q
     |||||||||||| || ||||| ||||| |||||||||||||           |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  15295185 atataactcataaattaggaacgaataccacactgaagatacattttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgcttt 15295284  T
Q  190 caaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttt 289  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  15295285 caaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttt 15295384  T
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  15295385 tatatttttagcaacaatattcttcttccatcaaattttgagtcatacta 15295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 28998504 - 28998839
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||| ||||||||||    ||||||||  ||||| || ||||||| ||||||||| ||||||||||||    
T  28998504 gttttgttgttgtcattctaaacccttgtttcagcctcctctatctc----aaagtttactctgattcaaagtctatatttatagtaaaagtataactca 28998599  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||| || |||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  28998600 taaatttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 28998699  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||  |||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  28998700 ttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagtttta 28998799  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  28998800 gcaacaatattctccatccatcaaattttgagtcatacta 28998839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 29004220 - 29004555
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||| ||||||||||    ||||||||  ||||| || ||||||| ||||||||| ||||||||||||    
T  29004220 gttttgttgttgtcattctaaacccttgtttcagcctcctctatctc----aaagtttactctgattcaaagtctatatttatagtaaaagtataactca 29004315  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||| || |||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  29004316 taaatttggaacgaataccacactaaatatacggtttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 29004415  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||  |||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  29004416 ttgcatcaaatatttcttcgtacggtacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagtttta 29004515  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  29004516 gcaacaatattctccatccatcaaattttgagtcatacta 29004555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 71 - 339
Target Start/End: Original strand, 17324954 - 17325222
Alignment:
Q  71 gtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataa 170  Q
    |||||| ||||||||| ||||||||||||||| |||||||| ||||  || |||||||||||          ||||||||||||||||||||||||||||    
T  17324954 gtctatatttatagtaaaagtataactcataaatttggaacgaatatcaccctgaagatacgttttttttttctccttcagtgaaagaatatttgcataa 17325053  T
Q  171 aaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaag 270  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| | |||||     
T  17325054 aaaatataatattcccttgcaaaatatatttgcatcaaatcgtttttcatacggtacaaaaatatatttattgtccataaatatattttcaactcaaaat 17325153  T
Q  271 atatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17325154 atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 17325222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 48665207 - 48664857
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| |||||||  |||||||   |||| ||  || |||||  ||||| ||  |||||| ||||||||| ||||||||||    
T  48665207 gttttgttgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagtataact 48665108  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctc---------cttcagtgaaagaatatttgcataaaaaatataatattccctt 188  Q
    ||||| |||||||||||||| ||||||||||||||           |          ||||| ||||||||||||||||| |||||||||||||||||||    
T  48665107 cataaatttggaacaaatactacactgaagatacgttttttttttttttttttctttcttcaatgaaagaatatttgcatcaaaaatataatattccctt 48665008  T
Q  189 tcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatctt 288  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  48665007 tcaaaatatatgtgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatctt 48664908  T
Q  289 ttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48664907 ttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 48664857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 146 - 340
Target Start/End: Original strand, 2949617 - 2949811
Alignment:
Q  146 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtc 245  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  2949617 cttcagtgaaagaatatttgtatcaaaaatataatattccctttcaaaatatatttgcatcaaatcattcttcatacaatacaaaaatatatttattgtc 2949716  T
Q  246 cataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatactat 340  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  2949717 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaaattttgagtcatactat 2949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 152 - 339
Target Start/End: Original strand, 4131690 - 4131877
Alignment:
Q  152 tgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt-gtccataa 250  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  4131690 tgaaagaatatttgcatcaaaa-tataatattccctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttatttgtccataa 4131788  T
Q  251 atatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4131789 atatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 4131877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 45693834 - 45694016
Alignment:
Q  154 aaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaata 253  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45693834 aaagaatatttgcataaaaaatatattattctctttcaaaatatatttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaata 45693933  T
Q  254 tatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcata 336  Q
    ||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  45693934 tatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgaatcata 45694016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 159 - 328
Target Start/End: Original strand, 6115532 - 6115701
Alignment:
Q  159 atatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgt 258  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |    
T  6115532 atatttgcataaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcattcatacgatacaaaaatatatttattgtccataaatatattt 6115631  T
Q  259 tcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaatttt 328  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6115632 tcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 6115701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 38 - 232
Target Start/End: Original strand, 46432013 - 46432207
Alignment:
Q  38 ctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnn 137  Q
    |||| ||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||         
T  46432013 ctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacagtgaagatacgttttt 46432112  T
Q  138 nnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaa 232  Q
         |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46432113 tttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaa 46432207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 2510575 - 2510801
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  2510575 gttttgtggttgcctttataaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 2510674  T
Q  100 taactttggaacaaatacaacactgaagatacg----nnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaact 195  Q
    ||| |||||||||||||| |||||||| |||||              |||||||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  2510675 taaatttggaacaaataccacactgaaaatacgttttttttctttccctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaat 2510774  T
Q  196 atatttgcatcaaatcgttcttcatac 222  Q
    |||||||||||||||||||||||||||    
T  2510775 atatttgcatcaaatcgttcttcatac 2510801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 156 - 340
Target Start/End: Complemental strand, 6997395 - 6997218
Alignment:
Q  156 agaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatata 255  Q
    ||||||||||||| ||||||||||||||| |||||||      ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  6997395 agaatatttgcatcaaaaatataatattctctttcaa------tttgcatcaaatcgttcttcatacggtataaaaatatatttattgtccataa-tata 6997303  T
Q  256 tgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatactat 340  Q
    | || ||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  6997302 tttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattttgagtcatactat 6997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 6996221 - 6996067
Alignment:
Q  146 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtc 245  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||      ||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  6996221 cttcagtgaaagaatatttgcaacaaaaatataatattccctttcaa------tttacatcaaatcgttcttcatacggtacaaaaatatatgtattgtc 6996128  T
Q  246 cataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaa 306  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  6996127 cataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 229 - 339
Target Start/End: Original strand, 46432521 - 46432631
Alignment:
Q  229 aaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaatttt 328  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  329 gagtcatacta 339  Q
    |||||||||||    
T  46432621 gagtcatacta 46432631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 16561260 - 16561138
Alignment:
Q  215 cttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctcc 314  Q
    ||||||||| |||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |    
T  16561260 cttcatacggtacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttc 16561161  T
Q  315 atccatcaaattttgagtcatac 337  Q
    ||||| |||||||||| ||||||    
T  16561160 atccaacaaattttgaatcatac 16561138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 11693580 - 11693666
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||||||| ||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11693580 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 334
Target Start/End: Original strand, 13785662 - 13785835
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca------------- 264  Q
    |||||||| ||| ||| ||||||||||||||||| | |||||||||||||||||||||||||| | || |||||||||| |||||||                 
T  13785662 aatattccttttaaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttactatctataaatatattttcagcaacaatattctaga 13785761  T
Q  265 ----caaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
        ||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  13785762 aacacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccatccatcaatttttgagtca 13785835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 26520516 - 26520580
Alignment:
Q  146 cttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaat 210  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26520516 cttcggtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaat 26520580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 6115479 - 6115541
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcat 205  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  6115479 ctccttcaatgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcat 6115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 14352842 - 14352759
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    |||||||||||| ||| ||||||||||||||||| | ||||||||| |||||||||||||||| | | ||||||||||| ||||    
T  14352842 aatattccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttactattcataaatatattttca 14352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 32260817 - 32260746
Alignment:
Q  263 cacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| |||||| |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  32260817 cacaaaatatattttaaacaattcttttatatttttagcaacaatcttcttcatccatcaaattttgagtca 32260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47177392 - 47177301
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    |||||||  |||||| ||||||||| ||||    
T  47177392 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 47177301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47179743 - 47179652
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    |||||||  |||||| ||||||||| ||||    
T  47179743 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 47179652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12302756 - 12302849
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagttta-gcctgatacacagtctatctttatagtacaagta 92  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||   ||||||||  |||||| ||||||||| |||||    
T  12302756 gttttgttgttgcatttctaaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagta 12302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6995951 - 6996064
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    ||||||  ||||  ||||| ||  |||||| |||||| || ||||||||||||    
T  6995951 gttttgttgttgcctttctaaaccgttgtttcggccccctcta----tctcaagatttactctgattcaaggtctatatttataataaaagtataactca 6996046  T
Q  100 taactttggaacaaatac 117  Q
    ||| |||||||| |||||    
T  6996047 taaatttggaacgaatac 6996064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28207317 - 28207406
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||    ||||||||| ||||||||  |||||| ||||||||| ||||||    
T  28207317 gttttgttgttgtctttctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaggtctatatttatagtaaaagtat 28207406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28842525 - 28842434
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||   ||||||||  || ||| ||||||||| ||||||    
T  28842525 gttttgttgttgcctttctaaacccttgtttcagccccctcta--tctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtat 28842434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 32260882 - 32260833
Alignment:
Q  215 cttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  32260882 cttcatacggtacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13215111 - 13215022
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    ||||||| ||||  ||||||||  |||||| ||||||||| ||||||    
T  13215111 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaaatttactctgatacaaggtctatatttatagtaaaagtat 13215022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38925729 - 38925818
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  38925729 gttttgttgttgcctttctgaactcttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 38925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41646950 - 41646861
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| |||| |||| ||||||||||    ||||||||||||  ||||||||  |||||| ||||||||| ||||||    
T  41646950 gttttgttgttgcctttctaaacccttatttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaaagtat 41646861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6823045 - 6822999
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6823045 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 6822999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 10115555 - 10115517
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  10115555 agcacaaaatatatttgaaacaaatcttttatattttta 10115517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17318923 - 17318877
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  17318923 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 17318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18307139 - 18307093
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  18307139 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 18307093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20302489 - 20302443
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  20302489 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 20302443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25127902 - 25127852
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctc 50  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  25127902 gttttgttgttgcctttctaaacccttgtttcaggcccctctatctctctc 25127852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25248765 - 25248811
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  25248765 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 25248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31423125 - 31423171
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31423125 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 31423171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51750069 - 51750023
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  51750069 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 51750023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9241337 - 9241374
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccc 38  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  9241337 gttttgttgttgcctttctaaaccttgtttcagccccc 9241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16428683 - 16428638
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatct 45  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  16428683 gttttgttgttgcctttctaaacccttgtttcagccccctctatct 16428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25251526 - 25251608
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagta 86  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    |||||| |||||  |||||||| ||||||| |||||||||    
T  25251526 gttttgttgttgtctttctaaacctttgtttcagccccctcta----tctcaaggtttactctgatacaaagtctatatttatagta 25251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4131630 - 4131678
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  4131630 gttttgttgttgccattctaaatccttgtttcagccccctctatctctc 4131678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 10115653 - 10115572
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    |||||||| ||| ||| ||||||||||||||||  | |||||||||  | ||||||||  ||||||||||||||||||| ||||    
T  10115653 aatattccgtttaaaaatatatttgcatcaaatattccttcatacgggataaaaatat--ttattgtccataaatatattttca 10115572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 13112047 - 13112091
Alignment:
Q  225 tacaaaaatatatttattgtccataaatatatgttcagcacaaaa 269  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaa 13112091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15823576 - 15823487
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||||||    |||||||   |||||||  |||||| ||||||||| ||||||    
T  15823576 gttttgttgttgcctttctaaacccttgtttcagccccctttatctct----aagtttactttgatacaaggtctatatttatagtaaaagtat 15823487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 334
Target Start/End: Original strand, 11693686 - 11693753
Alignment:
Q  267 aaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||| |||||| |||||||  ||||||| |||||| || ||| |||| |||||||||||||||||||||    
T  11693686 aaatatatttaaaacaaaatttttataattttagcaataatcttcttcatccatcaaattttgagtca 11693753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 339
Target Start/End: Original strand, 6997388 - 6997422
Alignment:
Q  305 aatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||| ||||||||||||||||    
T  6997388 aatattctccatccatcatattttgagtcatacta 6997422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11457726 - 11457772
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  11457726 gttttgttgttgtctttctaaaccattgtttcagccccctctatctc 11457772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17186379 - 17186425
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||    
T  17186379 gttttgttgttgcctttctaaacccttatttcagccccctctatctc 17186425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18839617 - 18839571
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  18839617 gttttgttgttgcctatctaaacccttgtttcagccccctctatctc 18839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28840710 - 28840619
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||| |||||||||||| |||||||  |||||| ||||||||  |||||||   ||||||||  |||||| ||||||||| ||||||    
T  28840710 gttttgttgtttcctttctaaacccttgtttcatccccctgtatctctc--aaagtttgctctgatacaaggtctatatttatagtaaaagtat 28840619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31425270 - 31425316
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  31425270 gttttgttgttgcctttctaaacccttgtttcagccccctttatctc 31425316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 51752394 - 51752349
Alignment:
Q  2 ttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||    
T  51752394 ttttgttgttacctttctaaactcttgtttcagccccctctatctc 51752349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 14352473 - 14352429
Alignment:
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||| |||||||||||| |||| ||||||||||||||| |||||    
T  14352473 tatatgtttagtaacaatcttcttcatccatcaaattttaagtca 14352429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 26520412 - 26520495
Alignment:
Q  47 tctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatac 131  Q
    |||||| |||||  |||||||| ||||||| ||||||| | || ||||||| |||| |||||||| ||||  |||||||||||||    
T  26520412 tctcaaggtttactctgatacaaagtctatatttatag-agaaatataacttataaatttggaacgaatatcacactgaagatac 26520495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47451678 - 47451589
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||| ||| ||||| ||||||  ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  47451678 gttttgttgttgccattccaaacccttgtttaagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 47451589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 230; Significance: 1e-126; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 24348302 - 24347964
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||  |||||| ||||||||| ||||||||||||    
T  24348302 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtataactca 24348203  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||| |||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  24348202 taaatttggaacaaataccacattgaagatactttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 24348103  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  24348102 ttgcatcaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatattttta 24348004  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  24348003 gcaacaatattctccatccatcaaattttgagtcatacta 24347964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 22132639 - 22132982
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgcccc-----ctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtata 94  Q
    |||||||||||||||||||||||| ||||||| |||||     |||| ||||||||||||||||||||||||||  |||||| ||||||||| |||||||    
T  22132639 gttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtata 22132738  T
Q  95 actcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaac 194  Q
    |||||||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  22132739 actcataaatttggaacaaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaa 22132837  T
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatat 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  22132838 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatat 22132937  T
Q  295 ttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  22132938 ttttagcaacaatattctccatccatcaaattttgaatcatacta 22132982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 38 - 339
Target Start/End: Original strand, 22134913 - 22135214
Alignment:
Q  38 ctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnn 137  Q
    |||| |||||||||||||||||| |||||||  |||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||         
T  22134913 ctctctctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagtataactcataaatttggaacaaataccacactgaagatacgttttt 22135012  T
Q  138 nnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatat 237  Q
         ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22135013 tttttctccttcagtgaaagaatatttgaatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatat 22135112  T
Q  238 ttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatac 337  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22135113 ttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatac 22135212  T
Q  338 ta 339  Q
    ||    
T  22135213 ta 22135214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 17662483 - 17662821
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||   ||||||||  |||||| ||||||||| ||||||||||||    
T  17662483 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtataactca 17662582  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| |||||||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  17662583 taaatttggaacaaataccacactgaagatac-ttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 17662681  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  17662682 ttgcatcaaatcgttcttcgtacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatattttta 17662781  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||  ||||||||||    
T  17662782 gcaacaatattctccatccatcaaatttgtagtcatacta 17662821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 14787680 - 14788016
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||  |||||||||  |||||||  |||||| ||||||||| ||||||||||||    
T  14787680 gttttgttgttgccattctaaacccttgtttcagccccctctatctctc--aaagtttagtatgatacaaggtctatatttatagtaaaagtataactca 14787777  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  14787778 taaatttggaacgaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 14787876  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  14787877 ttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatattttta 14787976  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||| |||||||||||||||||||||||||||||||||    
T  14787977 gcaacattattctccatccatcaaattttgagtcatacta 14788016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 44600087 - 44600423
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||    |||||||    | |||||  |||||| ||||||||| ||||||||||||    
T  44600087 gttttgttgttgcttttctaaacccttgtttcagccccctctatctc----aaagtttgctttaatacaaggtctatatttatagtaaaagtataactca 44600182  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnc-tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||| ||||||||| ||||||||||| ||          | ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  44600183 taaatttgaaacaaataccacactgaagattcgttttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattcccttttaaaatata 44600282  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  44600283 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattttt 44600382  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || |||||||||||||||||||||| |||||||||||||||    
T  44600383 agcaacaatattctccatccatcaatttttgagtcatacta 44600423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 5101081 - 5100748
Alignment:
Q  1 gttttgttgttgcctttctaaacctt-gtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||||| ||||| | ||||||||||||    || ||||| |||||| ||  |||||| ||||||||| ||||||||||||    
T  5101081 gttttgttgttgtcattctaaacctttgtttcagtcccctctatctc----aaggtttaccctgattcaaggtctatatttatagtaaaagtataactca 5100986  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| | | ||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  5100985 taaatttggaacgaataccagattgaagatacgtttttttt--ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 5100888  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  5100887 ttgcatcaaatcgttcttcatacggtacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatattttta 5100788  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  5100787 gcaacaatattctccatccatcaaattttgagtcatacta 5100748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 56030528 - 56030194
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||||| ||||||||    || |||||  |||||||| || |||| ||||||||| || |||||||||    
T  56030528 gttttgttgttgtcattctaaacccttgtttcagccccttctatctc----aaggtttactctgatacaaagcctatatttatagtaaaaatataactca 56030433  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||  ||||| |||| ||||||||           |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  56030432 taaatttggaaagaataccacaccgaagatac-ttttttttttctccttcagtgaaagaatatttgcaccaaaaatataatattccctttcaaaatatat 56030334  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  56030333 ttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 56030234  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  56030233 gcaacaatattctccatccatcaaattttgagtcatacta 56030194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 143 - 328
Target Start/End: Complemental strand, 30136516 - 30136331
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 242  Q
    |||||||| |||||||||||||| || ||||||||||||||| |||| ||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  30136516 ctccttcaatgaaagaatatttgaatcaaaaatataatattctcttttaaaatatatttgcatcaaatcgttcttcatacagtacaaaaatatatttatt 30136417  T
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaatttt 328  Q
    |||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  30136416 gtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaatttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 195 - 339
Target Start/End: Original strand, 47211159 - 47211303
Alignment:
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatat 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  47211159 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttatat 47211258  T
Q  295 ttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  47211259 ttttagcaacaatattctccatccatcaaattttaagtcatacta 47211303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 53405214 - 53404998
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  53405214 gttttgttgttgcctttctaaacccttgtttcagcccc-tctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 53405116  T
Q  100 taactttggaacaaatacaacactgaagatacg-nnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||||||||| |||||||| |||||           |||||| ||||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  53405115 taaatttggaacaaataccacactgaaaatacgtttttttttttctcctttagtgaaagaatatttgcatcaaaaatataatttttcctttcaaaatata 53405016  T
Q  199 tttgcatcaaatcgttct 216  Q
    ||||||||||||||||||    
T  53405015 tttgcatcaaatcgttct 53404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 143 - 335
Target Start/End: Original strand, 38890517 - 38890692
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatatt-ccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttat 241  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  38890517 ctcctttagtgaaagaatatttgcatcaaaaatataatatttccctttcaaaatatatttgcatcaaatcgtccttcatacaatacaaaaatatatttat 38890616  T
Q  242 tgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcat 335  Q
    |||||||||||                  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38890617 tgtccataaat------------------atatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcat 38890692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 47210989 - 47211160
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc--tctcaaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||  |||||| ||||||||| ||||||||||    
T  47210989 gttttgttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataact 47211088  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcata 169  Q
    ||||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||||    
T  47211089 cataaatttggaacaaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcata 47211160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 10112787 - 10112631
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttg 277  Q
    ||||||| |||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||    
T  10112787 aatattctctttcaaa-tatatttacatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatagtttcagcacaaaatatatttg 10112689  T
Q  278 aaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||    ||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||    
T  10112688 aaac----cttttatatttttagcaacaatattcttcattcaacaaattttaagtcatacta 10112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 9022225 - 9022065
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttg 277  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||||| |||| |||||||    
T  9022225 aatattcccttttaaaatatatttgcatcaaatctttcttcatacggtagaaaaatatatttattgt-cataaatatattttcagcaaaaaatatatttg 9022127  T
Q  278 aaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||| |||||||||| |  |||||||||   ||||||| ||||||||| ||||||||    
T  9022126 aaacaaatcatttatattttcaacaacaatatttctcatccataaaattttgaatcatacta 9022065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18709412 - 18709548
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc----tctcaaagtttagcctgatacacagtctatctttatagtacaagtataa 95  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    |||||||||||||||| |||||  |||||| ||||||||| ||||||||    
T  18709412 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctaatacaaggtctatatttatagtaaaagtataa 18709511  T
Q  96 ctcataactttggaacaaatacaacactgaagatacg 132  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  18709512 ctcataaatttggaacaaataccacactgaagatacg 18709548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 190 - 336
Target Start/End: Complemental strand, 9863650 - 9863507
Alignment:
Q  190 caaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttt 289  Q
    |||| ||||||||||||||||| | |||||| |   ||||||||||||||||||| ||||||||||| || ||||||||| || ||||||||||||| ||    
T  9863650 caaaatatatttgcatcaaatcttccttcatgc---acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatt 9863554  T
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcata 336  Q
    ||||||||||||||||||||  | |||||| ||||||||||||||||    
T  9863553 tatatttttagtaacaatatatttcatccaacaaattttgagtcata 9863507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 19322641 - 19322547
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatat 237  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||  |||||||||||||    
T  19322641 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtcctttatacagtacaaaaatatat 19322547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 19322510 - 19322413
Alignment:
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttag-taacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||| ||||| | |||| |||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatacta 19322413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 14789500 - 14789566
Alignment:
Q  273 atttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatacta 14789566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37089620 - 37089710
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||  |||||| ||||||||| ||||    
T  37089620 gttttgttgttgccattctaaacccttgtttcagccccctctatctctctc-aagtttagcctgatacaaggtctatatttatagtaaaagt 37089710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 54929094 - 54929180
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    ||||||||  || ||| ||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  54929094 aatattcctattaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5637714 - 5637807
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   || |||||  |||||| ||||||||| ||||||    
T  5637714 gttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagtat 5637807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8631668 - 8631753
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagt 85  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    ||||||| ||||||| ||||||||    
T  8631668 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagt 8631753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 38209186 - 38209259
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| |||||| ||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  38209186 agcacaaaatatatttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagtca 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47274811 - 47274722
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    ||||||||| ||||||||  |||||| ||||||||| ||||||    
T  47274811 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaggtctatatttatagtaaaagtat 47274722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 10979755 - 10979676
Alignment:
Q  185 cctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    ||||| ||| ||||||||||||||||| | ||||||||   |||||||||||||| |||||||||||||||| |||||||    
T  10979755 cctttaaaaatatatttgcatcaaatcttccttcatacagcacaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11008815 - 11008906
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||  |   ||||||||||||  |||||| ||||||||| ||||    
T  11008815 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagcctgatacaaggtctatatttatagtaaaagt 11008906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 5516771 - 5516833
Alignment:
Q  266 aaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaatttt 328  Q
    |||| ||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||    
T  5516771 aaaatatatttgaaacaattcatttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38409289 - 38409194
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc--tctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||  |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  38409289 gttttgttgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 38409194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11006486 - 11006577
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||  |   ||| ||||||||  |||||| ||||||||| ||||    
T  11006486 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaaatagtctgatacaaggtctatatttatagtaaaagt 11006577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36919834 - 36919925
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| |||||  |||| ||| ||||||||||  ||||||||  |||||| ||||||||| ||||||    
T  36919834 gttttgttgttgcctttctaaacccttgtttcagcccc--ctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaagtat 36919925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3824819 - 3824871
Alignment:
Q  1 gttttgttgttgcctttctaaaccttgtttccgccccctctatctctctcaaag 54  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  3824819 gttttgttgttgcttttctaaacct-gtttcagccccctctatctctctcaaag 3824871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 5198504 - 5198415
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  5198504 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 5198415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7941405 - 7941357
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  7941405 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctc 7941357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22802983 - 22803072
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  22802983 gttttgttgttgccattctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 22803072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24888880 - 24888791
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    ||||||   ||||||||  |||||| ||||||||| ||||||    
T  24888880 gttttgttgttgcctttctaaacccttgtttcagccccctctatctct----aagtttgctctgatacaaggtctatatttatagtaaaagtat 24888791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48486403 - 48486314
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  48486403 gttttgttgttgccattctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 48486314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 51015330 - 51015241
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    |||| ||||||   |||||||| ||||||| ||||||||| ||||||    
T  51015330 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctccaagtttgctctgatacaaagtctatatttatagtaaaagtat 51015241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36378376 - 36378288
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagta 92  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||    |||||| |||||  |||||||| ||||||| ||||||||| |||||    
T  36378376 gttttgttgttgcctttctaaacccttgtttcagccccgtcta----tctcaaggtttattctgatacaaagtctatatttatagtaaaagta 36378288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9148337 - 9148246
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||  |||||||||||||   ||||||||  | |||| ||||||||| ||||||    
T  9148337 gttttgttgttgcctttctaaacccttgcttcagccccctcta--tctctcaaagtttgctctgatacaaggcctatatttatagtaaaagtat 9148246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11435039 - 11434993
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  11435039 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 11434993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13544043 - 13543985
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagttta 58  Q
    |||||||||||| | ||||| | ||||||||| ||||||||||||||||||||||||||    
T  13544043 gttttgttgttgtcattctagatccttgtttcagccccctctatctctctcaaagttta 13543985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22044639 - 22044685
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22044639 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 22044685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22046934 - 22046980
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22046934 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 22046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31849848 - 31849894
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31849848 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 31849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38928427 - 38928473
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  38928427 gttttgttgttgcctttctaaactcttgtttcagccccctctatctc 38928473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40637158 - 40637112
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  40637158 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 40637112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2891401 - 2891356
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatct 45  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  2891401 gttttgttgttgcctttctaaacccttgtttcagccccctctatct 2891356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 29609914 - 29609983
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttga 330  Q
    ||||||||| |||||||||| |||||    ||| |||||| ||||||||||| |||||||||||||||||    
T  29609914 agcacaaaatatatttgaaaaaaatcaagaatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 37313316 - 37313361
Alignment:
Q  2 ttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37313316 ttttgttgttgcctttctaaacccttgtttcagccccctctatctc 37313361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 619696 - 619785
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| |||| |||||| ||||||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  619696 gttttgttgttgtctttataaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 619785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16453393 - 16453345
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctc 48  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  16453393 gttttgttgttgcctttttaaacccttgtttcagccccctctatctctc 16453345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22801111 - 22801200
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| | ||||||||| ||||||| ||||||||||||||    ||||||||  ||||||||  |||||| ||||||||| ||||||    
T  22801111 gttttgttgttgtcattctaaacccttgtttcagccccctctatctc----aaagtttactctgatacaaggtctatatttatagtaaaagtat 22801200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 38209098 - 38209162
Alignment:
Q  178 aatattccctttcaaac-tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttat 241  Q
    |||||||| |||||||  ||||||||||||||||| | ||||||||  |||||||||||||||||    
T  38209098 aatattccttttcaaatatatatttgcatcaaatcttccttcatacagtacaaaaatatatttat 38209162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40091664 - 40091753
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||    ||||||||||||   |||||||  |||||| ||||||||| ||||||    
T  40091664 gttttgttgttgtctttctaaacccttgtttcagccccctcta----tctcaaagtttactttgatacaaggtctatatttatagtaaaagtat 40091753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 29609838 - 29609897
Alignment:
Q  202 gcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    |||||||||| | ||||||||| |||||||||||||||| | | ||||||||||| ||||    
T  29609838 gcatcaaatcttccttcatacggtacaaaaatatatttactcttcataaatatattttca 29609897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6764923 - 6764877
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  6764923 gttttgttgttgcctttctaaacccttgtttcagccccttctatctc 6764877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9174395 - 9174441
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  9174395 gttttgttgttgcttttctaaacccttgtttcagccccctctatctc 9174441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9176723 - 9176769
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  9176723 gttttgttgttgcttttctaaacccttgtttcagccccctctatctc 9176769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12396094 - 12396140
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  12396094 gttttgttgttgcctttctaaatccttgtttcagccccatctatctc 12396140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12401056 - 12401102
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  12401056 gttttgttgttgcctttctaaatccttgtttcagccccatctatctc 12401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18847237 - 18847191
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||    
T  18847237 gttttgttgttgcctttctaaacccttgtttcaaccccctctatctc 18847191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22780622 - 22780672
Alignment:
Q  1 gttttgttgttgcctttctaaacct-tgtttccgccccctctatctctctc 50  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||||||||||    
T  22780622 gttttgttgttgcttttctaaacccctgtttcagccccctctatctctctc 22780672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22782987 - 22783037
Alignment:
Q  1 gttttgttgttgcctttctaaacct-tgtttccgccccctctatctctctc 50  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||||||||||    
T  22782987 gttttgttgttgcttttctaaacccctgtttcagccccctctatctctctc 22783037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24880535 - 24880489
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  24880535 gttttgttgttgcctttctaaaccctagtttacgccccctctatctc 24880489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33415736 - 33415782
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  33415736 gttttgttgttacctttctaaacccttgtttcagccccctctatctc 33415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36921743 - 36921833
Alignment:
Q  1 gttttgttgttgcctttctaa-accttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||  |||||||| | |||||||||  ||||||||||||||  ||||||||  |||||| ||||| ||| ||||||    
T  36921743 gttttgttgttgcctttctaagcccttgttt-caccccctcta--tctctcaaagtttactctgatacaaggtctatatttattgtaaaagtat 36921833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 52942695 - 52942806
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacaca--gtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||| ||||||||| |||||     ||| ||||||||||||| |||||| |||  |||||| ||||||||  |||||| |||    
T  52942695 gttttgttgttgcctttctaaacccttgtttcagcccc-----tctatctcaaagtttagtctgatatacaaggtctatatttatagtgaaagtattact 52942789  T
Q  98 cataactttggaacaaat 115  Q
     | || ||||||||||||    
T  52942790 ta-aaatttggaacaaat 52942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 5516703 - 5516744
Alignment:
Q  215 cttcatacgatacaaaaatatatttattgtccataaatatat 256  Q
    |||||||||||| ||||||||||||||| || ||||||||||    
T  5516703 cttcatacgataaaaaaatatatttattatctataaatatat 5516744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 24446833 - 24446874
Alignment:
Q  6 gttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccctctatctc 24446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 54929198 - 54929267
Alignment:
Q  263 cacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| | |||| || |||||||||||||||||||| ||||||||| |   ||||||||||||| |||||    
T  54929198 cacaaaatacatttaaatcaaatcttttatatttttagcaacaatattat--ttccatcaaattttaagtca 54929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 23452486 - 23452824
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||    
T  23452486 gttttgttgttgcctttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtataactca 23452585  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||| |||           |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  23452586 taaatttggaacaaataccacactgaaggtac-ttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 23452684  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||||    
T  23452685 ttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatttattttcagcataaaatatatttgaaacaaatcttttatattttta 23452784  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  23452785 gcaacaatattctccatccatcaaattttgagtcatacta 23452824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 35215835 - 35216179
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc------aaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||      ||||||||||||||||||  |||||| ||||||||| ||||||    
T  35215835 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagtat 35215934  T
Q  94 aactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaa 193  Q
    ||||||||| |||||||||||||| |||| |||||| |           |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  35215935 aactcataaatttggaacaaataccacaccgaagattc-atttttttttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaa 35216033  T
Q  194 ctatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttata 293  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  35216034 atatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttata 35216133  T
Q  294 tttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  35216134 tttttagcaacaatattcttcatccatcaaattttgagtcatacta 35216179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 42452789 - 42452454
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||     ||||||   ||||||||  |||||| |||||| || ||||||||||||    
T  42452789 gttttgttgttgcctttctaaacccttgtttcagccccctctatctcc----aagtttgctctgatacaatgtctatatttataataaaagtataactca 42452694  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| |||| ||||||||           |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42452693 taaatttggaacaaataccacaccgaagatacattttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 42452594  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  42452593 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 42452494  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||| ||||||||||||||| ||||||||||    
T  42452493 gcaacaatattcttcatccatcaaattttaagtcatacta 42452454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 35218212 - 35218560
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc----------aaagtttagcctgatacacagtctatctttatagtacaa 89  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||          |||||||||||| |||||  |||||| ||||||||| ||    
T  35218212 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagccttatacaaggtctatatttatagtaaaa 35218311  T
Q  90 gtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattcccttt 189  Q
    ||||||||||||| |||||| ||||||| ||||||||||| ||          |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  35218312 gtataactcataaatttggagcaaataccacactgaagattcgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattctcttt 35218410  T
Q  190 caaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttt 289  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  35218411 caaaatatatttgcatcaaatcgttctttatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttt 35218510  T
Q  290 tatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  35218511 tatatttttagcaacaatattcttcatccatcaaattttgagtcatacta 35218560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 42923758 - 42924089
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||||||||  || |||||   |||| ||  |||||| ||||||||| ||||||||||||    
T  42923758 gttttgttgttgccattctaaacccttgtttcagcctcctctatctctc--aaggtttactatgattcaaggtctatatttatagtaaaagtataactca 42923855  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| || ||    ||||||||||           |||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||    
T  42923856 taaatttggaacgaacac----ctgaagatac--ttatttgttctccttcagtgaaagaatatttgcatcaaaaatataatatttcttttcaaaatatat 42923949  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  42923950 ttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttta 42924049  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  42924050 gcaacaatattctccatccatcaaattttgagtcatacta 42924089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 339
Target Start/End: Original strand, 27583713 - 27583902
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 242  Q
    |||||||||||||||||||||||||| |||       |||||| ||||||| ||||||||||||||||  | ||||||| | || |||||||||||||||    
T  27583713 ctccttcagtgaaagaatatttgcatcaaa-------tattccttttcaaaatatatttgcatcaaatattccttcatatggtataaaaatatatttatt 27583805  T
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  27583806 gttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatttgagtcatacta 27583902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 178 - 334
Target Start/End: Original strand, 28568584 - 28568740
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttg 277  Q
    |||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||    
T  28568584 aatattccctttcaaaatatatttgcatcaaatcttccttcacacgatacaaaaatatatttattgtccataaatatattttcaaaacaaaatatatttg 28568683  T
Q  278 aaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    |||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  28568684 aaacaaatcttttatagttttagcaacaatattcttcatctatcaaattttgagtca 28568740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 215 - 339
Target Start/End: Original strand, 27136368 - 27136500
Alignment:
Q  215 cttcatacgatacaaaaatatatttattgtccataaatatatgt--------tcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaa 306  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |        ||| ||||||| |||||||||||||||||||||||||||||| | |||    
T  27136368 cttcatacggtacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaccaa 27136467  T
Q  307 tattctccatccatcaaattttgagtcatacta 339  Q
    |||||| ||||||||||||||||||||||||||    
T  27136468 tattcttcatccatcaaattttgagtcatacta 27136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  249 aaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatac 337  Q
    |||||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 178 - 334
Target Start/End: Complemental strand, 15693755 - 15693583
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttc----------------- 260  Q
    ||||| |||||| ||| ||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||||||||| |||                     
T  15693755 aatatcccctttaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatttattgcccataaatatattttcagcaacaagtttttgga 15693656  T
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||| |||||    
T  15693655 agcacaaaatatatttgaaacaaatc-tttatatttttagcaacaatattattcatccatcaaattttaagtca 15693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 28568409 - 28568346
Alignment:
Q  271 atatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  28568409 atatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagtca 28568346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 41303549 - 41303623
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttata-tttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||| |||||||    
T  41303549 agcacaaaatatatttgaaacaaatcttttatattttttagcaacaatcttcttcatccatcaaattctgagtca 41303623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 7502723 - 7502638
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttct-tcatacgatacaaaaatatatttattgtccataaatatatgttcagc 263  Q
    |||||| ||||| ||| ||||||||||||||||| |||| |||||| |||||||||||| |||||||| ||||||||||| ||||||    
T  7502723 aatatttcctttaaaaatatatttgcatcaaatc-ttctgtcatacaatacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21520942 - 21521033
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||  ||||||||||| ||||||||  || ||| ||||||||| ||||||    
T  21520942 gttttgttgttgcctttctaaacccttgtttcagccccatctatctc--tcaaagtttagtctgatacaaggtttatatttatagtaaaagtat 21521033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5377678 - 5377735
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagttt 57  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  5377678 gttttgttgttgcctttctaaacccttgtttcagtcccctctatctctctcaaagttt 5377735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 39287040 - 39286979
Alignment:
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 256  Q
    ||||||||||||||||| |  |||||| | ||||||||||||||||||||||||||||||||    
T  39287040 tatatttgcatcaaatcttcattcatatggtacaaaaatatatttattgtccataaatatat 39286979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40032307 - 40032396
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    ||||||||||||  ||||||||  |||||| ||||||||| ||||||    
T  40032307 gttttgttgttgcctttctaaacccttgtttcagccccctcta----tctcaaagtttactctgatacaaggtctatatttatagtaaaagtat 40032396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 6264396 - 6264476
Alignment:
Q  3 tttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagta 86  Q
    |||||||||||||||||||||| ||||||| ||||||||||    ||||||||||||| ||||||||  |||||| |||||||||    
T  6264396 tttgttgttgcctttctaaacctttgtttcagccccctcta----tctcaaagtttagtctgatacaaggtctatatttatagta 6264476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 34575528 - 34575617
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatattt 239  Q
    |||||||||||||||||||||||||| |||       |||||||||||||| ||||||||||||||||  | ||| ||| | |||||||||||||||    
T  34575528 ctccttcagtgaaagaatatttgcatcaaa-------tattccctttcaaaatatatttgcatcaaattttcctttatatggtacaaaaatatattt 34575617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38020208 - 38020161
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctct 47  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  38020208 gttttgttgttgcctttctaaacccttgtttcagccccctctatctct 38020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 41304806 - 41304876
Alignment:
Q  185 cctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 256  Q
    ||||| ||| ||||||||||||||||| | ||||||| | |||||||||||||||| | |||||||||||||    
T  41304806 cctttaaaaatatatttgcatcaaatcttccttcatatg-tacaaaaatatatttactatccataaatatat 41304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13910293 - 13910339
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  13910293 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 13910339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19504594 - 19504640
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19504594 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 19504640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 22163199 - 22163278
Alignment:
Q  4 ttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagta 86  Q
    ||||||||||||||||||| ||||||||| ||||||||||    ||||||||||||  ||||||||  |||||| |||||||||    
T  22163199 ttgttgttgcctttctaaatccttgtttcagccccctcta----tctcaaagtttacactgatacaatgtctatatttatagta 22163278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24162461 - 24162548
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    |||||||   ||||||||  |||||| ||||||||| ||||    
T  24162461 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttgctctgatacaaggtctatatttatagtaaaagt 24162548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28196643 - 28196597
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28196643 gttttgttgttgcctttctaaacctttgtttcagccccctctatctc 28196597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31733014 - 31733060
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  31733014 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 31733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 19007645 - 19007600
Alignment:
Q  2 ttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19007645 ttttgttgttgcctttctaaacccttgtttcagccccctctatctc 19007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43623817 - 43623906
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||| |    ||||||  ||||||||  |||||| ||||||||| ||||||    
T  43623817 gttttgttgttgcctttctaaaccattgtttcacccccctctatctccc----agtttactctgatacaaggtctatttttatagtaaaagtat 43623906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 7502633 - 7502582
Alignment:
Q  280 acaaatcttttatatttttagtaacaatattctccatccatcaaattttgag 331  Q
    |||||||||||||| ||| || |||||| |||| ||||||||||||||||||    
T  7502633 acaaatcttttatactttgagcaacaatcttcttcatccatcaaattttgag 7502582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 330
Target Start/End: Complemental strand, 39286952 - 39286892
Alignment:
Q  266 aaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttga 330  Q
    |||| |||||||||||||||| ||||||||||||| |||||| |    |||||||||||||||||    
T  39286952 aaaatatatttgaaacaaatcatttatatttttagcaacaatct----catccatcaaattttga 39286892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19502260 - 19502306
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||    
T  19502260 gttttgttgttgcctttctaaactcttgtttcagccccctttatctc 19502306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22287585 - 22287631
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  22287585 gttttgttgttgcctttctaaacccttgtttcagccccctatatctc 22287631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27104805 - 27104759
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  27104805 gttttgttgttgcctttctgaacccttgtttcagccccctctatctc 27104759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 41303457 - 41303527
Alignment:
Q  186 ctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatat 256  Q
    |||| ||| |||||||| ||||| || | ||||| ||| ||||||| |||||||| |||||||||||||||    
T  41303457 ctttaaaaatatatttgaatcaattcttccttcacacggtacaaaattatatttactgtccataaatatat 41303527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 41304898 - 41304964
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||||| ||||||||  |||||||||||||||||||     ||| |||| |||||||||||||||||||||    
T  41304898 agcacaaaatatatttga--caaatcttttatattttta-----aatcttcttcatccatcaaattttgagtca 41304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42064521 - 42064475
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||    
T  42064521 gttttgttgttgcctttctaaacccttgtttcagctccctctatctc 42064475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45239225 - 45239283
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagttta 58  Q
    |||||||| ||| ||||||||| | ||||||| |||||||||||||||||||| |||||    
T  45239225 gttttgtttttgtctttctaaatcattgtttcagccccctctatctctctcaaggttta 45239283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6259064 - 6259153
Alignment:
Q  1 gttttgttgttgcctttctaaac-cttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    ||||| ||||||||||||||||| ||||||||  || ||||||||||    ||||||||| || |||||  |||||| ||||||||| ||||||    
T  6259064 gttttattgttgcctttctaaactcttgtttcatcctcctctatctc----aaagtttagtctaatacaaggtctatatttatagtaaaagtat 6259153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 22407658 - 22407747
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| || |||| ||    ||||| ||||||  ||||||||  |||||| ||||||||| ||||||    
T  22407658 gttttgttgttgcctttctaaacccttgtttcagcaccctata----tctcacagtttactctgatacaaggtctatatttatagtaaaagtat 22407747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 2629134 - 2629474
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgcccc-ctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactc 98  Q
    |||||||||||||||||||||||| ||||||| ||||| || | |||||||||||||||| | |||||||  |||||| ||||||||| ||||||||||     
T  2629134 gttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggtctatatttatagtaaaagtataacta 2629233  T
Q  99 ataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    |||| |||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  2629234 ataaatttggaacaaatactacactgaagatacgtttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 2629333  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2629334 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttt 2629433  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||| | ||||||||||||||||||||||||    
T  2629434 agcaacaatattcttcttccatcaaattttgagtcatacta 2629474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 30967266 - 30966928
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||  |||||| ||||||||| ||||||||||||    
T  30967266 gttttgttgttgtctttctaaacccttgtttcagccccctctatctctctcaaagtttagcct-atacaaggtctatatttatagtaaaagtataactca 30967168  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||| ||          |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  30967167 taaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattcgctttcaaaatatat 30967068  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  30967067 ttgcattaaatcgttcttcatacaatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatattttta 30966968  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||||||||||||||||||| |||||||||||    
T  30966967 gcaacaatattctccatccatcaaatttggagtcatacta 30966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 2 - 339
Target Start/End: Original strand, 30034853 - 30035191
Alignment:
Q  2 ttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactcat 100  Q
    ||||||||||||||||||||||| ||||||  || |||||||||||||| ||||||||||||||||||  |||||| ||||||||| |||||||||||||    
T  30034853 ttttgttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaaaagtataactcat 30034952  T
Q  101 aactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatt 200  Q
    || |||||||||||||  ||| ||||||||||          |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  30034953 aaatttggaacaaatatcacattgaagatacgtttttattttctccttcagtgaaagaatatctgcatcaaaaatataatattccctttcaaaatatatt 30035052  T
Q  201 tgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttag 300  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  30035053 tgcattaaatcgttcttcatacgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttag 30035152  T
Q  301 taacaatattctccatccatcaaattttgagtcatacta 339  Q
     ||||||||||||||||||||||||||||||||||||||    
T  30035153 caacaatattctccatccatcaaattttgagtcatacta 30035191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 12195764 - 12196099
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||    |||||||    |||||||  |||||| ||||||||| ||||||||||||    
T  12195764 gttttgttgttgcttttctaaacccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtataactca 12195859  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||||||||| ||||||||||| ||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12195860 taaatttggaacaaataccacactgaagattcgttttttttttctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 12195959  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  12195960 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatattttta 12196059  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||||||||||||||||||||| |||||||||||||||    
T  12196060 gcaacaatattctccatccatcaatttttgagtcatacta 12196099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 19704818 - 19705160
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc--aaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||  |||||||   ||||||||  |||||| ||||||||  || |||||||    
T  19704818 gttttgttgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaa-tataact 19704916  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnn--ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaact 195  Q
    ||||| |||||||| ||||  ||||| ||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19704917 cataaatttggaacgaatatcacacttaagatacgtttcttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaat 19705016  T
Q  196 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatt 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||    
T  19705017 atatttgcatcaaatcgtccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatt 19705116  T
Q  296 tttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  19705117 tttagcaacaatattcttcttccatcaaattttgagtcatacta 19705160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 71 - 339
Target Start/End: Complemental strand, 18318024 - 18317756
Alignment:
Q  71 gtctatctttatagtacaagtataactcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataa 170  Q
    |||||| ||||||||  ||||||||||||||| |||||||| ||||| ||||||||||||||          ||||||||||||||||||||||||||||    
T  18318024 gtctatatttatagtgaaagtataactcataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcataa 18317925  T
Q  171 aaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaag 270  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  18317924 aaaatataatattccctttcaaaatatatttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaat 18317825  T
Q  271 atatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||    
T  18317824 atatttgaaacaaatcttttatatttttagcaacaatattcttcttccttcaaattttgagtcatacta 18317756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 143 - 339
Target Start/End: Original strand, 5275727 - 5275923
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 242  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5275727 ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 5275826  T
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5275827 gtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 5275923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 26932811 - 26933153
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc----aaagtttagcctgatacacagtctatctttatagtacaagtataa 95  Q
    |||||||| |||| ||||||| || |||||||  |||||||||||||||||    |||||||    ||| |||  |||||| ||||||||  ||||||||    
T  26932811 gttttgttattgcttttctaagcccttgtttcaaccccctctatctctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataa 26932910  T
Q  96 ctcataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaact 195  Q
    | ||||| |||||||||||||| ||||||||||| ||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  26932911 cccataaatttggaacaaataccacactgaagattcgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaat 26933009  T
Q  196 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatt 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| | |||||||||||||||||||||||||    
T  26933010 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatt 26933109  T
Q  296 tttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||| |||||||||||||||||||||| |||||||||||||||    
T  26933110 tttagcaacaatattctccatccatcaatttttgagtcatacta 26933153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 17852607 - 17852275
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||||| ||||||| ||||||||||||||    || |||||  ||||| || ||||||| ||||||||| ||||||||||||    
T  17852607 gttttgttgttgtcattctaaacccttgtttcagccccctctatctc----aaggtttactctgattcaaagtctatatttatagtaaaagtataactca 17852512  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnn--ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
    ||| |||||||| ||||| |||| ||||||||             ||| |||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  17852511 taaatttggaacgaataccacac-gaagatacttttttttttcttctctttcagtgaaataatatttgcatcaaaaatataatattccctttcaaaatat 17852413  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||||||    
T  17852412 atttgcatcaaatagttcttcataaggtacaaaaatatatttattgtccataaatatattttcagcataaa--atatttgaaacaaatcttttatatttt 17852315  T
Q  298 tagta--acaatattctccatccatcaaattttgagtcata 336  Q
    ||| |  |||||||||||||| |||||||||||||||||||    
T  17852314 tagcaacacaatattctccat-catcaaattttgagtcata 17852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 147 - 339
Target Start/End: Complemental strand, 17011973 - 17011784
Alignment:
Q  147 ttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtcc 246  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  17011973 ttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatatttgcatcaaatcgtccatcatacggtacaaaaatatatttattgtcc 17011874  T
Q  247 ataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||| |||  ||||||  |||||| ||||||| ||||||||||||||| || |||||||| ||||||||||||||| ||||||||||    
T  17011873 ataaatatattttctacacaaa--atatttaaaacaaa-cttttatatttttagcaataatattcttcatccatcaaattttaagtcatacta 17011784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 143 - 339
Target Start/End: Original strand, 22858343 - 22858531
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttatt 242  Q
    |||||||| ||||||||||||||||| ||||        |||||||||||| |||||||||||| |||| |  |||||||| ||||||||||||||||||    
T  22858343 ctccttcaatgaaagaatatttgcatcaaaa--------ttccctttcaaaatatatttgcatctaatcttctttcatacggtacaaaaatatatttatt 22858434  T
Q  243 gtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||| |||||||||||  |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  22858435 gtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaattttgagtcatacta 22858531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 20526708 - 20526551
Alignment:
Q  178 aatattccctttcaaac-tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatattt 276  Q
    ||||||| ||||||||  ||||||||||||||||| | ||||||||| ||||||||||||| ||     ||||||||||| ||||||| |||| ||||||    
T  20526708 aatattctctttcaaaaatatatttgcatcaaatcttccttcatacggtacaaaaatatatgta-----cataaatatattttcagcataaaatatattt 20526614  T
Q  277 gaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  20526613 gaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatacta 20526551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20915605 - 20915694
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||  |||||| ||||||||| ||||    
T  20915605 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaa--tttagcctgatacaaggtctatatttatagtaaaagt 20915694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Complemental strand, 30445404 - 30445318
Alignment:
Q  178 aatattccctttcaaactatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||| ||| ||| ||||||||||||||||| | ||||||| | |||||||||||||||||||| ||||||||||| |||||||    
T  30445404 aatattcctttttaaaatatatttgcatcaaatcttccttcatatggtacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15532930 - 15533040
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||    ||||||||| ||||||||  |||||| ||||||||| |||||||||| |    
T  15532930 gttttgttgttacctttctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaggtctatatttatagtaaaagtataactta 15533025  T
Q  100 taactttggaacaaat 115  Q
     || ||||||||||||    
T  15533026 -aaatttggaacaaat 15533040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15541389 - 15541499
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||    ||||||||| ||||||||  |||||| ||||||||| |||| ||||| |    
T  15541389 gttttgtttttgcctttctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaggtctatatttatagtaaaagtgtaactta 15541484  T
Q  100 taactttggaacaaat 115  Q
     || ||||||||||||    
T  15541485 -aaatttggaacaaat 15541499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 30445304 - 30445243
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatca 322  Q
    ||||||||| ||||||||||||||| |||||||||| ||| ||||||||||| |||||||||    
T  30445304 agcacaaaatatatttgaaacaaatattttatatttctagcaacaatattcttcatccatca 30445243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 30443097 - 30443022
Alignment:
Q  261 agcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatc--aaattttgagtca 334  Q
    |||| |||| ||||||||||||||||| |||||||||||  ||||||||||| ||||||||  |||||||||||||    
T  30443097 agcaaaaaatatatttgaaacaaatctcttatatttttaacaacaatattcttcatccatcataaattttgagtca 30443022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4816480 - 4816581
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc----------tctcaaagtttagcctgatacacagtctatctttatagtacaa 89  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||          ||||||||||||||||||||||  |||||| ||||||||| ||    
T  4816480 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 4816579  T
Q  90 gt 91  Q
    ||    
T  4816580 gt 4816581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28241570 - 28241617
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctct 47  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  28241570 gttttgttgttgcctttctaaacccttgtttcagccccctctatctct 28241617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24338697 - 24338743
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  24338697 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 24338743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25477339 - 25477293
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  25477339 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 25477293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26065051 - 26065001
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  26065051 gttttgttgttgccattctaaacccttgtttcagccccctctatctctctc 26065001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26085020 - 26084970
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  26085020 gttttgttgttgccattctaaacccttgtttcagccccctctatctctctc 26084970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32447565 - 32447611
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32447565 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 32447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3390444 - 3390346
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||    |||||| |||||  ||||||||  |||||| ||||||||| ||||||  ||||    
T  3390444 gttttgttgttgcctttctaaacccttgtttcagccccgtcta----tctcaaggtttatactgatacaatgtctatatttatagtaaaagtatctctca 3390349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1072126 - 1072215
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||||| || || ||||    ||||||||||||  ||||||||  |||||| ||||||||| ||||||    
T  1072126 gttttgttgttgcctttctaaacccttgtttcagctccttcta----tctcaaagtttactctgatacaatgtctatatttatagtaaaagtat 1072215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8995544 - 8995496
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  8995544 gttttgttgttgcctttctaaacccttgttttagccccctctatctctc 8995496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9019991 - 9019943
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctc 48  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  9019991 gttttgttgttgcctttctaaacccttgttttagccccctctatctctc 9019943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 30443175 - 30443111
Alignment:
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagca 264  Q
    |||||||||||||| | ||| ||||| |||||| |||||||  |||||||||||||||| |||||||    
T  30443175 atttgcatcaaatcttcctttatacggtacaaacatatatt--ttgtccataaatatattttcagca 30443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3630113 - 3630159
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||    
T  3630113 gttttgttgttgcctttctaaaccgatgtttcagccccctctatctc 3630159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11983278 - 11983324
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||    
T  11983278 gttttgttgttgcctttctaagcctttgtttcagccccctctatctc 11983324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13057259 - 13057213
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc 46  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  13057259 gttttgttcttgcctttctaaacccttgtttcagccccctctatctc 13057213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14459014 - 14459060
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||    
T  14459014 gttttgttgttgcctttctaaacccttatttcagccccctctatctc 14459060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14507424 - 14507470
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  14507424 gttttgttgttgcctttctaaacccttgttttagccccctctatctc 14507470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3233980 - 3234025
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatct 45  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  3233980 gttttgttgttgtctttctaaatccttgtttcagccccctctatct 3234025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22490705 - 22490658
Alignment:
Q  1 gttttgttgttgcctttctaaa--ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  22490705 gttttgttgttgcctttcaaaaacccttgtttcagccccctctatctc 22490658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 206; Significance: 1e-112; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 52050 - 51714
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||  |||||||||  |||||||  |||||| ||||||||| ||||||||||||    
T  52050 gttttgttgttgccattctaaacccttgtttcagccccctctatctctc--aaagtttagtatgatacaaggtctatatttatagtaaaagtataactca 51953  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  51952 taaatttggaacgaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 51854  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  51853 ttgcatcaaatcgttctttatacggtacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatattttta 51754  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | |||| |||||||||||||||||||||||||||||||||    
T  51753 gcaacattattctccatccatcaaattttgagtcatacta 51714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 50230 - 50164
Alignment:
Q  273 atttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatacta 50164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 193; Significance: 1e-104; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 2081 - 1740
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatct--ctctcaaagtttagcctgatacacagtctatctttatagtacaagtataact 97  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||  ||||||||||||    ||| |||  |||||| ||||||||  ||||||||||    
T  2081 gttttgttgttgcctttctaaacccttgtttcagccccctatatctttctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagtataact 1982  T
Q  98 cataactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactat 197  Q
     |||| |||||||| ||||| ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1981 tataaatttggaacgaataccacactgaagatacgttttttttttctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaaatat 1882  T
Q  198 atttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttt 297  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  1881 atttgcatcaaatcttccttcatacgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttt 1782  T
Q  298 tagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||| ||||||||||| | ||| ||||||||||||||||||||    
T  1781 tagcaacaatattcttcttccttcaaattttgagtcatacta 1740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 184; Significance: 3e-99; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 11722 - 12056
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||| | ||||||| || |||||| ||||||||||||||     | |||||  ||||| ||  |||||| ||||||||| ||||||||||||    
T  11722 gttttgttgttgtcattctaaatccctgtttcagccccctctatctcc----aggtttactctgattcaaggtctatatttatagtaaaagtataactca 11817  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatat 199  Q
    ||| |||||||| ||||| ||||||||||||||          |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  11818 taaatttggaacgaataccacactgaagatacgttttttttt-ctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatatat 11916  T
Q  200 ttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttta 299  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  11917 ttgcatcaaatcgttcttcatacggtacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatattttta 12016  T
Q  300 gtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    | ||||||||||||||||||||||||||||| ||||||||    
T  12017 gcaacaatattctccatccatcaaattttgaatcatacta 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 166; Significance: 2e-88; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 79224 - 78888
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtataactca 99  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||    ||  ||||  ||||| ||  |||||| ||||||||| | ||||||||||    
T  79224 gttttgttgttgcctttctaaacccttgttttagccccctctatctc----aagttttactctgattcaaggtctatatttatagtaaaggtataactca 79129  T
Q  100 taactttggaacaaatacaacactgaagatacgnnnnnnnnnnc-tccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactata 198  Q
    ||| |||||||| ||||| |||||||||||||           | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  79128 taaatttggaacgaataccacactgaagatacattttttttttcctccttcagtgaaagaatatttgcatcaaaaatataatattccctttcaaaatata 79029  T
Q  199 tttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatattttt 298  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| || |||| |||| |||||||| |||||||||||||||||||    
T  79028 tttgcatcaaatcgttcttcatacagtacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatattttt 78929  T
Q  299 agtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    || ||||||||||||||||||||||||||| ||||||||||    
T  78928 agcaacaatattctccatccatcaaattttaagtcatacta 78888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 229 - 339
Target Start/End: Original strand, 2070 - 2180
Alignment:
Q  229 aaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaatttt 328  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  329 gagtcatacta 339  Q
    |||||||||||    
T  2170 gagtcatacta 2180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 2022 - 2080
Alignment:
Q  143 ctccttcagtgaaagaatatttgcataaaaaatataatattccctttcaaactatattt 201  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  2022 ctccttcagtgaaagaatatttgcatcaaaaatataatattctctttcaaaatatattt 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 4694 - 4552
Alignment:
Q  196 atatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttcagcacaaaagatatttgaaacaaatcttttatatt 295  Q
    ||||||||||||||| || ||||||||  ||||||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||    
T  4694 atatttgcatcaaattgtccttcatacagtacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatt 4595  T
Q  296 tttagtaacaatattctccatccatcaaattttgagtcatact 338  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||    
T  4594 tttagcaacaatattcttcatccatcaaattttgagttatact 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 250 - 339
Target Start/End: Original strand, 1 - 90
Alignment:
Q  250 aatatatgttcagcacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtcatacta 339  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatacta 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 73274 - 73365
Alignment:
Q  3 tttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    |||||||| |||||| ||||||||| ||||||    
T  73274 tttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagtat 73365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 69540 - 69597
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagttt 57  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  69540 gttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagttt 69597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4036 - 3947
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    ||||||||| ||||||||  |||||| ||||||||| ||||||    
T  4036 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc----aaagtttagtctgatacaaggtctatatttatagtaaaagtat 3947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29210 - 29113
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctc------tctcaaagtttagcctgatacacagtctatctttatagtacaagt 91  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||      ||||||||||||||||||||||  |||||| ||||||||| ||||    
T  29210 gttttgttgttgcctttttaaacccttgtttcagccccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 29113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 57840 - 57905
Alignment:
Q  195 tatatttgcatcaaatcgttcttcatacgatacaaaaatatatttattgtccataaatatatgttca 261  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||||| |||| |||||| ||||    
T  57840 tatatttgcatcaaatt-ttcttcatacggtacaaaaatatatttattgttcatacatatattttca 57905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 57926 - 57995
Alignment:
Q  263 cacaaaagatatttgaaacaaatcttttatatttttagtaacaatattctccatccatcaaattttgagtca 334  Q
    ||||||| |||| | |||||||||||||||| |||||| ||||  ||||  |||||||||||||||||||||    
T  57926 cacaaaaaatatataaaacaaatcttttatacttttagaaaca--attcatcatccatcaaattttgagtca 57995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41732 - 41779
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctct 47  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  41732 gttttgttgttgcctttctaaacccttgtttcagccccctctatctct 41779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 80 - 30
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctctc 50  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  80 gttttgttgttgcttttctaaacccttgtttcagccccctctatctctctc 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2919 - 2873
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2919 gttttgttgttgcctttctaaacccttgtttcagccccctctatctc 2873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15058 - 14969
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctctctcaaagtttagcctgatacacagtctatctttatagtacaagtat 93  Q
    |||||||||||||||||||||| | ||||||| ||||||||||    |||||||||||   ||||||||  |||||| ||||||||| ||||||    
T  15058 gttttgttgttgcctttctaaatcattgtttcagccccctcta----tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtat 14969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14631 - 14679
Alignment:
Q  1 gttttgttgttgcctttctaaacc-ttgtttccgccccctctatctctc 48  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  14631 gttttgttgttgtctttctaaaccattgtttcatccccctctatctctc 14679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1080 - 1126
Alignment:
Q  1 gttttgttgttgcctttctaaa-ccttgtttccgccccctctatctc 46  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  1080 gttttgttgttgcctttctaaacccttgtttcagccccttctatctc 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University