View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1579_low_24 (Length: 396)

Name: NF1579_low_24
Description: NF1579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1579_low_24
NF1579_low_24
[»] chr6 (37 HSPs)
chr6 (146-378)||(1966822-1967054)
chr6 (9-147)||(33829553-33829692)
chr6 (29-142)||(33828993-33829106)
chr6 (39-142)||(10087806-10087909)
chr6 (39-142)||(33974247-33974350)
chr6 (39-147)||(3403936-3404045)
chr6 (39-151)||(32733944-32734056)
chr6 (39-149)||(30388311-30388420)
chr6 (39-142)||(7654496-7654599)
chr6 (39-151)||(18242103-18242216)
chr6 (43-142)||(21031982-21032081)
chr6 (55-147)||(10039674-10039764)
chr6 (39-151)||(22684306-22684417)
chr6 (39-151)||(22754651-22754762)
chr6 (39-131)||(29074320-29074412)
chr6 (39-131)||(29079084-29079176)
chr6 (39-131)||(29106893-29106985)
chr6 (55-142)||(11656746-11656833)
chr6 (84-142)||(3403720-3403778)
chr6 (55-142)||(18241857-18241944)
chr6 (39-142)||(22755038-22755140)
chr6 (83-146)||(31598720-31598782)
chr6 (55-147)||(21032243-21032336)
chr6 (39-142)||(2354412-2354514)
chr6 (91-142)||(3825530-3825580)
chr6 (39-138)||(13177004-13177102)
chr6 (91-150)||(13579651-13579709)
chr6 (45-144)||(21032101-21032203)
chr6 (55-142)||(30388065-30388150)
chr6 (39-146)||(32733556-32733663)
chr6 (39-117)||(13176647-13176725)
chr6 (50-142)||(2354769-2354861)
chr6 (39-118)||(2762510-2762590)
chr6 (91-140)||(2762611-2762661)
chr6 (91-140)||(10039843-10039893)
chr6 (95-145)||(12714431-12714481)
chr6 (40-125)||(23250840-23250926)
[»] chr8 (69 HSPs)
chr8 (9-151)||(39723965-39724108)
chr8 (9-149)||(13026631-13026772)
chr8 (9-151)||(22851384-22851527)
chr8 (9-142)||(9823278-9823412)
chr8 (29-150)||(13027219-13027340)
chr8 (9-142)||(3307341-3307475)
chr8 (9-132)||(39723415-39723539)
chr8 (9-151)||(9822742-9822885)
chr8 (9-147)||(13937307-13937445)
chr8 (12-142)||(13936726-13936853)
chr8 (9-151)||(15042139-15042281)
chr8 (9-126)||(6092794-6092911)
chr8 (39-142)||(41662350-41662454)
chr8 (39-148)||(37396705-37396814)
chr8 (39-142)||(24473716-24473819)
chr8 (39-148)||(6199044-6199153)
chr8 (39-142)||(765737-765841)
chr8 (39-145)||(34498122-34498227)
chr8 (39-149)||(34498503-34498613)
chr8 (39-152)||(37397093-37397206)
chr8 (39-142)||(12281127-12281231)
chr8 (39-142)||(15156132-15156236)
chr8 (39-151)||(15444595-15444707)
chr8 (39-142)||(43245874-43245978)
chr8 (39-142)||(15442766-15442869)
chr8 (9-76)||(22851903-22851970)
chr8 (39-154)||(24473334-24473449)
chr8 (39-152)||(6198651-6198764)
chr8 (39-142)||(17431290-17431393)
chr8 (39-142)||(20861586-20861689)
chr8 (39-142)||(41662524-41662627)
chr8 (39-149)||(16928938-16929047)
chr8 (67-146)||(25439102-25439180)
chr8 (39-146)||(33727053-33727160)
chr8 (55-148)||(15155880-15155973)
chr8 (54-142)||(37752087-37752176)
chr8 (39-142)||(9623505-9623608)
chr8 (55-142)||(16929207-16929293)
chr8 (81-142)||(25438795-25438856)
chr8 (39-151)||(2856520-2856632)
chr8 (55-142)||(43246139-43246227)
chr8 (39-142)||(16169177-16169279)
chr8 (55-142)||(37752381-37752467)
chr8 (39-123)||(74932-75016)
chr8 (55-151)||(12281390-12281486)
chr8 (39-147)||(15043731-15043838)
chr8 (39-142)||(15444214-15444317)
chr8 (83-142)||(23123341-23123400)
chr8 (39-105)||(37752154-37752221)
chr8 (55-156)||(34313754-34313852)
chr8 (49-142)||(3463903-3463996)
chr8 (93-142)||(22851958-22852007)
chr8 (55-142)||(18020053-18020137)
chr8 (39-142)||(16169555-16169658)
chr8 (93-148)||(22786837-22786892)
chr8 (91-141)||(43162539-43162588)
chr8 (55-140)||(7127789-7127877)
chr8 (55-142)||(74689-74773)
chr8 (94-144)||(74864-74915)
chr8 (95-138)||(7127660-7127702)
chr8 (45-140)||(18019915-18020013)
chr8 (83-126)||(43598747-43598790)
chr8 (91-144)||(3463820-3463873)
chr8 (55-125)||(9465838-9465908)
chr8 (75-142)||(9623864-9623932)
chr8 (82-146)||(7127913-7127977)
chr8 (93-142)||(43162237-43162285)
chr8 (93-144)||(11007655-11007707)
chr8 (91-142)||(23123517-23123566)
[»] chr7 (67 HSPs)
chr7 (9-155)||(44599479-44599626)
chr7 (9-154)||(13863304-13863450)
chr7 (9-142)||(13863875-13864007)
chr7 (29-142)||(44600073-44600186)
chr7 (9-149)||(8643684-8643824)
chr7 (9-149)||(46816229-46816369)
chr7 (39-156)||(20418877-20418994)
chr7 (39-155)||(10533024-10533140)
chr7 (39-142)||(37888836-37888939)
chr7 (39-145)||(18863967-18864073)
chr7 (39-152)||(37972344-37972457)
chr7 (39-151)||(22740150-22740262)
chr7 (39-147)||(37889207-37889315)
chr7 (39-149)||(9412272-9412383)
chr7 (39-142)||(20419272-20419375)
chr7 (39-148)||(37971957-37972066)
chr7 (39-142)||(3687604-3687707)
chr7 (39-150)||(9034862-9034974)
chr7 (39-142)||(9035240-9035344)
chr7 (39-142)||(3205041-3205144)
chr7 (39-142)||(17156970-17157073)
chr7 (39-147)||(42418976-42419084)
chr7 (39-142)||(13741560-13741663)
chr7 (39-142)||(13744181-13744283)
chr7 (39-142)||(29292925-29293028)
chr7 (39-147)||(18864350-18864457)
chr7 (39-142)||(29293294-29293397)
chr7 (50-144)||(22740550-22740643)
chr7 (9-118)||(46815195-46815304)
chr7 (39-142)||(3204672-3204773)
chr7 (39-142)||(36527746-36527849)
chr7 (39-142)||(38826861-38826964)
chr7 (39-142)||(48359323-48359424)
chr7 (39-141)||(48359606-48359707)
chr7 (39-142)||(42418594-42418697)
chr7 (55-151)||(23686683-23686777)
chr7 (39-146)||(36527383-36527489)
chr7 (63-147)||(15567246-15567327)
chr7 (84-148)||(13772638-13772702)
chr7 (55-142)||(9412026-9412113)
chr7 (91-142)||(13772901-13772952)
chr7 (55-145)||(27096306-27096395)
chr7 (55-145)||(27181908-27181997)
chr7 (54-142)||(5735255-5735344)
chr7 (92-151)||(6908207-6908265)
chr7 (55-142)||(29291809-29291896)
chr7 (82-142)||(5349724-5349781)
chr7 (62-142)||(8953863-8953939)
chr7 (93-151)||(18925056-18925114)
chr7 (55-142)||(3687356-3687445)
chr7 (45-144)||(5735376-5735470)
chr7 (81-142)||(16198967-16199028)
chr7 (92-144)||(6908485-6908536)
chr7 (55-118)||(15567019-15567079)
chr7 (92-152)||(23686414-23686473)
chr7 (84-140)||(33628653-33628709)
chr7 (91-141)||(18925229-18925280)
chr7 (84-142)||(18925315-18925371)
chr7 (49-143)||(27096167-27096262)
chr7 (49-143)||(27182041-27182136)
chr7 (83-142)||(35079963-35080021)
chr7 (55-111)||(5349497-5349550)
chr7 (39-76)||(5349709-5349747)
chr7 (92-142)||(38191566-38191616)
chr7 (89-142)||(30857902-30857955)
chr7 (93-141)||(38191387-38191435)
chr7 (91-123)||(34235978-34236010)
[»] chr4 (73 HSPs)
chr4 (9-151)||(36096392-36096535)
chr4 (9-142)||(50679341-50679475)
chr4 (9-146)||(43050606-43050744)
chr4 (9-142)||(43051169-43051303)
chr4 (29-147)||(50678777-50678895)
chr4 (9-147)||(56505691-56505830)
chr4 (9-142)||(36095820-36095953)
chr4 (9-150)||(45830115-45830255)
chr4 (9-147)||(56506491-56506630)
chr4 (9-155)||(47219122-47219265)
chr4 (26-152)||(39744400-39744526)
chr4 (39-148)||(28196343-28196452)
chr4 (9-142)||(28196691-28196824)
chr4 (39-142)||(4239314-4239417)
chr4 (9-156)||(32703568-32703715)
chr4 (40-142)||(25161881-25161983)
chr4 (9-142)||(45828997-45829130)
chr4 (39-151)||(9023238-9023350)
chr4 (39-147)||(9380689-9380797)
chr4 (39-142)||(9380310-9380413)
chr4 (39-142)||(16555764-16555868)
chr4 (39-142)||(9023628-9023731)
chr4 (39-142)||(23540200-23540303)
chr4 (39-142)||(32703228-32703331)
chr4 (9-142)||(11529171-11529305)
chr4 (39-148)||(39744027-39744136)
chr4 (39-142)||(169016-169120)
chr4 (26-142)||(293152-293268)
chr4 (39-142)||(169387-169490)
chr4 (39-142)||(39086571-39086674)
chr4 (39-142)||(43292040-43292143)
chr4 (39-148)||(292779-292888)
chr4 (39-147)||(3930427-3930535)
chr4 (9-142)||(48405965-48406097)
chr4 (39-144)||(13198604-13198711)
chr4 (39-142)||(26207694-26207797)
chr4 (39-145)||(48406333-48406438)
chr4 (39-147)||(23539839-23539945)
chr4 (39-126)||(25162261-25162348)
chr4 (39-142)||(26207364-26207466)
chr4 (39-142)||(43292306-43292408)
chr4 (39-126)||(44468871-44468958)
chr4 (55-141)||(49178779-49178866)
chr4 (56-142)||(18077167-18077253)
chr4 (55-142)||(35393741-35393826)
chr4 (39-150)||(12758152-12758262)
chr4 (55-142)||(13198870-13198957)
chr4 (84-142)||(24775776-24775834)
chr4 (55-125)||(39415244-39415314)
chr4 (83-148)||(11241653-11241717)
chr4 (46-123)||(11530154-11530230)
chr4 (45-156)||(23432465-23432577)
chr4 (91-148)||(16555512-16555569)
chr4 (91-142)||(8181994-8182046)
chr4 (91-142)||(8182172-8182224)
chr4 (39-146)||(12757766-12757872)
chr4 (91-142)||(22681578-22681628)
chr4 (92-142)||(25225399-25225449)
chr4 (91-140)||(49178644-49178694)
chr4 (84-149)||(5205984-5206049)
chr4 (67-112)||(39912463-39912508)
chr4 (38-122)||(23433433-23433516)
chr4 (55-142)||(3930182-3930268)
chr4 (49-142)||(39415485-39415575)
chr4 (39-142)||(39912057-39912158)
chr4 (55-142)||(54508818-54508904)
chr4 (93-147)||(22681881-22681935)
chr4 (91-140)||(27304893-27304943)
chr4 (56-140)||(5206100-5206185)
chr4 (94-142)||(7603422-7603469)
chr4 (39-74)||(11241637-11241673)
chr4 (93-140)||(16555695-16555743)
chr4 (91-142)||(27304721-27304770)
[»] chr2 (66 HSPs)
chr2 (9-143)||(7591203-7591337)
chr2 (9-147)||(2639399-2639538)
chr2 (9-142)||(26842155-26842289)
chr2 (9-149)||(26841583-26841724)
chr2 (9-142)||(2638823-2638958)
chr2 (29-142)||(18296079-18296192)
chr2 (9-151)||(7591767-7591910)
chr2 (39-146)||(8851147-8851254)
chr2 (39-145)||(26692768-26692874)
chr2 (39-147)||(30190921-30191030)
chr2 (45-155)||(24832321-24832432)
chr2 (39-147)||(7664246-7664354)
chr2 (39-151)||(7664621-7664733)
chr2 (39-146)||(40469676-40469784)
chr2 (39-150)||(41790860-41790971)
chr2 (38-151)||(5378655-5378768)
chr2 (9-76)||(18296639-18296707)
chr2 (39-142)||(20347411-20347515)
chr2 (39-146)||(32673090-32673197)
chr2 (39-142)||(8851531-8851633)
chr2 (39-142)||(16911217-16911319)
chr2 (39-146)||(26692395-26692502)
chr2 (67-142)||(37720207-37720282)
chr2 (9-142)||(38490758-38490891)
chr2 (38-147)||(5379906-5380015)
chr2 (39-156)||(17850967-17851083)
chr2 (39-142)||(6171404-6171507)
chr2 (26-138)||(6324924-6325036)
chr2 (39-146)||(5793446-5793553)
chr2 (39-142)||(16910830-16910933)
chr2 (83-142)||(18296685-18296744)
chr2 (39-145)||(19141797-19141901)
chr2 (39-117)||(17851350-17851428)
chr2 (42-142)||(6325298-6325398)
chr2 (39-150)||(7979562-7979671)
chr2 (39-142)||(11883626-11883730)
chr2 (55-142)||(11883890-11883977)
chr2 (39-145)||(41790491-41790596)
chr2 (39-151)||(26737728-26737841)
chr2 (67-142)||(18750102-18750176)
chr2 (41-142)||(19141447-19141547)
chr2 (55-151)||(30191189-30191285)
chr2 (39-142)||(7979951-7980053)
chr2 (55-156)||(40469416-40469517)
chr2 (49-151)||(15321386-15321486)
chr2 (84-150)||(18055309-18055375)
chr2 (55-144)||(15920779-15920867)
chr2 (92-144)||(15321513-15321565)
chr2 (55-147)||(20347161-20347252)
chr2 (43-142)||(18055051-18055147)
chr2 (93-151)||(29230276-29230334)
chr2 (55-157)||(32672831-32672932)
chr2 (91-144)||(43495484-43495537)
chr2 (93-142)||(6171159-6171207)
chr2 (93-142)||(6495723-6495772)
chr2 (54-145)||(17345733-17345822)
chr2 (91-142)||(26737485-26737534)
chr2 (93-156)||(29343569-29343633)
chr2 (91-144)||(18055167-18055221)
chr2 (67-145)||(18749726-18749803)
chr2 (92-140)||(26737657-26737706)
chr2 (27-76)||(31641551-31641600)
chr2 (93-142)||(40221316-40221364)
chr2 (92-144)||(15921032-15921083)
chr2 (93-140)||(40469607-40469655)
chr2 (98-142)||(43495312-43495356)
[»] scaffold0328 (2 HSPs)
scaffold0328 (9-142)||(6712-6846)
scaffold0328 (9-142)||(6155-6288)
[»] chr5 (62 HSPs)
chr5 (9-147)||(11351346-11351483)
chr5 (9-142)||(18817528-18817662)
chr5 (9-142)||(11350811-11350944)
chr5 (9-150)||(18816947-18817089)
chr5 (39-152)||(12498560-12498673)
chr5 (39-145)||(21207226-21207332)
chr5 (39-148)||(12498876-12498985)
chr5 (39-148)||(26571112-26571221)
chr5 (39-142)||(18433018-18433122)
chr5 (39-142)||(22729388-22729490)
chr5 (39-147)||(25115755-25115864)
chr5 (39-147)||(25174847-25174956)
chr5 (39-151)||(43464140-43464251)
chr5 (39-146)||(2817148-2817254)
chr5 (39-142)||(3888242-3888345)
chr5 (39-146)||(3888610-3888717)
chr5 (39-146)||(43463755-43463861)
chr5 (39-155)||(26020440-26020557)
chr5 (39-148)||(26570726-26570835)
chr5 (39-142)||(19514528-19514632)
chr5 (39-142)||(19514911-19515014)
chr5 (68-147)||(31569905-31569983)
chr5 (39-142)||(34147458-34147561)
chr5 (39-145)||(34576867-34576972)
chr5 (39-126)||(42919323-42919410)
chr5 (39-147)||(10098889-10098996)
chr5 (39-151)||(41072162-41072273)
chr5 (39-146)||(11316922-11317029)
chr5 (55-150)||(25175115-25175210)
chr5 (39-142)||(25940524-25940627)
chr5 (67-142)||(37610205-37610279)
chr5 (67-142)||(37780323-37780397)
chr5 (54-161)||(16466708-16466812)
chr5 (39-112)||(34147172-34147245)
chr5 (55-142)||(18433281-18433367)
chr5 (55-149)||(22428930-22429021)
chr5 (39-142)||(22729011-22729112)
chr5 (67-156)||(37780718-37780806)
chr5 (39-142)||(25940961-25941065)
chr5 (91-150)||(25116061-25116120)
chr5 (55-142)||(34577129-34577214)
chr5 (47-145)||(11316714-11316812)
chr5 (83-148)||(22429188-22429252)
chr5 (50-151)||(30401876-30401977)
chr5 (39-156)||(37610567-37610681)
chr5 (67-142)||(2817551-2817625)
chr5 (67-142)||(10098522-10098597)
chr5 (83-144)||(9665558-9665617)
chr5 (93-139)||(16726084-16726130)
chr5 (66-151)||(5187805-5187890)
chr5 (55-155)||(9665792-9665888)
chr5 (91-147)||(33324838-33324894)
chr5 (92-148)||(41382890-41382945)
chr5 (38-142)||(41383117-41383217)
chr5 (92-146)||(9869559-9869611)
chr5 (92-151)||(23011073-23011131)
chr5 (91-144)||(9869738-9869792)
chr5 (39-76)||(22429172-22429210)
chr5 (95-144)||(23011261-23011311)
chr5 (97-144)||(12441196-12441244)
chr5 (99-142)||(12441320-12441361)
chr5 (92-144)||(23011383-23011434)
[»] chr1 (75 HSPs)
chr1 (29-142)||(49284412-49284525)
chr1 (9-156)||(6002226-6002374)
chr1 (9-142)||(6002810-6002945)
chr1 (9-122)||(49284972-49285086)
chr1 (39-142)||(39691948-39692051)
chr1 (39-155)||(46823833-46823949)
chr1 (39-142)||(9347129-9347232)
chr1 (39-146)||(48104677-48104784)
chr1 (39-145)||(50430029-50430135)
chr1 (39-151)||(47955300-47955413)
chr1 (39-151)||(27172110-27172221)
chr1 (39-147)||(28634105-28634213)
chr1 (39-147)||(32162991-32163099)
chr1 (39-142)||(48105064-48105167)
chr1 (39-142)||(50526420-50526523)
chr1 (39-149)||(44911021-44911131)
chr1 (39-151)||(13918440-13918552)
chr1 (39-147)||(26815067-26815175)
chr1 (39-147)||(28633718-28633826)
chr1 (39-142)||(20480171-20480273)
chr1 (39-142)||(26814697-26814800)
chr1 (39-146)||(42611184-42611291)
chr1 (39-147)||(999473-999580)
chr1 (39-147)||(9347499-9347606)
chr1 (39-146)||(22149649-22149754)
chr1 (39-142)||(6703842-6703945)
chr1 (39-142)||(50615569-50615671)
chr1 (39-142)||(50623397-50623499)
chr1 (39-145)||(42611562-42611668)
chr1 (38-151)||(19008697-19008810)
chr1 (83-151)||(48190765-48190833)
chr1 (39-150)||(6703455-6703566)
chr1 (39-142)||(21687028-21687131)
chr1 (39-142)||(27172490-27172592)
chr1 (39-142)||(46824226-46824329)
chr1 (39-142)||(49317755-49317857)
chr1 (39-142)||(49318114-49318216)
chr1 (67-151)||(999106-999189)
chr1 (39-142)||(20371300-20371403)
chr1 (39-147)||(44911385-44911493)
chr1 (9-76)||(48191302-48191369)
chr1 (39-142)||(4692381-4692484)
chr1 (83-142)||(8108985-8109044)
chr1 (39-142)||(13918815-13918918)
chr1 (84-147)||(48191348-48191411)
chr1 (38-146)||(31847894-31848002)
chr1 (55-147)||(31848158-31848248)
chr1 (39-142)||(17518551-17518652)
chr1 (70-142)||(20480591-20480662)
chr1 (39-142)||(41082912-41083015)
chr1 (9-76)||(48190811-48190879)
chr1 (55-147)||(8108719-8108810)
chr1 (39-142)||(33085674-33085775)
chr1 (55-147)||(47955572-47955664)
chr1 (50-144)||(1176837-1176932)
chr1 (39-142)||(21687415-21687517)
chr1 (39-142)||(50429659-50429762)
chr1 (39-141)||(50949513-50949615)
chr1 (67-142)||(20371043-20371116)
chr1 (69-153)||(49318421-49318504)
chr1 (91-142)||(13589659-13589709)
chr1 (55-150)||(17518298-17518392)
chr1 (39-113)||(44224067-44224141)
chr1 (69-151)||(50949155-50949237)
chr1 (67-151)||(47498295-47498377)
chr1 (91-147)||(1177018-1177074)
chr1 (39-118)||(24671283-24671360)
chr1 (75-117)||(32162757-32162799)
chr1 (92-148)||(39690791-39690847)
chr1 (91-147)||(41083211-41083266)
chr1 (95-144)||(31848017-31848067)
chr1 (96-142)||(50615243-50615289)
chr1 (96-142)||(50623071-50623117)
chr1 (89-142)||(47498493-47498545)
chr1 (93-144)||(22149580-22149632)
[»] chr3 (70 HSPs)
chr3 (9-148)||(1928351-1928490)
chr3 (39-147)||(48159895-48160003)
chr3 (39-142)||(8314016-8314119)
chr3 (39-150)||(27238848-27238959)
chr3 (39-156)||(40848509-40848626)
chr3 (39-142)||(20968967-20969070)
chr3 (39-151)||(48160281-48160393)
chr3 (39-142)||(22429161-22429264)
chr3 (39-150)||(26007567-26007678)
chr3 (39-150)||(27238460-27238571)
chr3 (39-142)||(42673244-42673346)
chr3 (39-142)||(53687891-53687994)
chr3 (39-147)||(40848909-40849017)
chr3 (26-142)||(42672981-42673096)
chr3 (39-142)||(47666283-47666386)
chr3 (39-156)||(53688251-53688367)
chr3 (39-147)||(3353500-3353606)
chr3 (39-142)||(10293611-10293715)
chr3 (39-151)||(10348747-10348859)
chr3 (39-142)||(3353131-3353231)
chr3 (39-151)||(24485408-24485519)
chr3 (43-142)||(47871073-47871172)
chr3 (39-147)||(9026734-9026839)
chr3 (39-126)||(21896459-21896546)
chr3 (39-142)||(22429544-22429646)
chr3 (39-117)||(24485049-24485127)
chr3 (67-145)||(53766163-53766241)
chr3 (55-151)||(18875155-18875251)
chr3 (39-142)||(36180559-36180660)
chr3 (39-142)||(26007185-26007287)
chr3 (9-123)||(28702299-28702410)
chr3 (84-150)||(14015957-14016022)
chr3 (39-113)||(42456144-42456217)
chr3 (17-150)||(10771499-10771629)
chr3 (44-141)||(4947263-4947362)
chr3 (55-151)||(10293873-10293969)
chr3 (83-147)||(45060863-45060927)
chr3 (9-76)||(1927812-1927878)
chr3 (39-142)||(10348482-10348585)
chr3 (55-142)||(20968721-20968808)
chr3 (69-148)||(36180968-36181047)
chr3 (39-142)||(44008349-44008451)
chr3 (83-151)||(1927766-1927834)
chr3 (55-142)||(17372301-17372387)
chr3 (91-144)||(13657621-13657675)
chr3 (92-140)||(18874887-18874935)
chr3 (83-150)||(21895652-21895720)
chr3 (39-151)||(47665905-47666017)
chr3 (50-144)||(17372433-17372527)
chr3 (55-142)||(42627511-42627596)
chr3 (39-142)||(44007970-44008073)
chr3 (55-147)||(47870821-47870910)
chr3 (82-148)||(42455787-42455853)
chr3 (81-142)||(53766569-53766630)
chr3 (92-148)||(8315083-8315138)
chr3 (55-118)||(13657472-13657536)
chr3 (93-149)||(14015690-14015746)
chr3 (94-144)||(14015873-14015925)
chr3 (39-77)||(18874957-18874996)
chr3 (39-74)||(21895700-21895735)
chr3 (115-150)||(31577415-31577450)
chr3 (92-142)||(1100918-1100968)
chr3 (91-144)||(1101090-1101143)
chr3 (91-145)||(23630035-23630089)
chr3 (89-142)||(3644781-3644834)
chr3 (97-142)||(45060599-45060644)
chr3 (92-152)||(1101182-1101242)
chr3 (91-142)||(17372594-17372643)
chr3 (93-140)||(18875017-18875065)
chr3 (91-143)||(26540693-26540744)
[»] scaffold0110 (2 HSPs)
scaffold0110 (39-154)||(45754-45869)
scaffold0110 (55-142)||(45540-45626)
[»] scaffold0802 (2 HSPs)
scaffold0802 (39-142)||(1367-1471)
scaffold0802 (55-142)||(1121-1208)
[»] scaffold0017 (2 HSPs)
scaffold0017 (39-142)||(185222-185325)
scaffold0017 (39-142)||(184842-184945)
[»] scaffold0319 (2 HSPs)
scaffold0319 (39-142)||(6644-6747)
scaffold0319 (55-142)||(6397-6485)
[»] scaffold0192 (1 HSPs)
scaffold0192 (39-142)||(25316-25420)
[»] scaffold0460 (2 HSPs)
scaffold0460 (39-142)||(333-436)
scaffold0460 (67-142)||(739-813)
[»] scaffold0041 (2 HSPs)
scaffold0041 (39-142)||(38643-38746)
scaffold0041 (39-112)||(38284-38357)
[»] scaffold0029 (1 HSPs)
scaffold0029 (39-142)||(9908-10012)
[»] scaffold0001 (5 HSPs)
scaffold0001 (56-142)||(438933-439019)
scaffold0001 (55-147)||(439165-439255)
scaffold0001 (92-145)||(183364-183416)
scaffold0001 (49-142)||(183621-183713)
scaffold0001 (95-144)||(183544-183594)
[»] scaffold0069 (2 HSPs)
scaffold0069 (39-142)||(50454-50557)
scaffold0069 (67-142)||(50078-50151)
[»] scaffold0176 (2 HSPs)
scaffold0176 (67-142)||(19624-19698)
scaffold0176 (79-147)||(20031-20099)
[»] scaffold0002 (1 HSPs)
scaffold0002 (39-142)||(411926-412028)
[»] scaffold0535 (1 HSPs)
scaffold0535 (43-142)||(10015-10114)
[»] scaffold0015 (2 HSPs)
scaffold0015 (39-126)||(16870-16960)
scaffold0015 (55-142)||(17119-17206)
[»] scaffold1221 (2 HSPs)
scaffold1221 (89-142)||(1514-1566)
scaffold1221 (93-145)||(1786-1837)
[»] scaffold0376 (2 HSPs)
scaffold0376 (89-142)||(7458-7510)
scaffold0376 (91-142)||(7600-7650)
[»] scaffold0009 (1 HSPs)
scaffold0009 (55-142)||(205690-205774)
[»] scaffold0598 (2 HSPs)
scaffold0598 (92-142)||(6877-6925)
scaffold0598 (93-142)||(6610-6659)
[»] scaffold0035 (1 HSPs)
scaffold0035 (91-144)||(73087-73141)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 146 - 378
Target Start/End: Original strand, 1966822 - 1967054
Alignment:
Q  146 taaaaataaaatggaagatttctctctttttccttaatcccctccctttaaactcattttatcctctccaatctcacaaatagacccattaaaagagtgt 245  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1966822 taaaaataatatggaagatttctctcttttcccttaatcccctccctctaaactcattttatcctctccaatctcgcaaatagacccattaaaagagtgt 1966921  T
Q  246 gaaggtcatttgagtatcacaagaatcccctcactccaaactcatcttattccctccaatttcacaaataaacccatagaaaaagtttgttggtcatttg 345  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1966922 gaaggtcatttgagtatcacaagaatcctctcactccaaagtcatcttattccctccaatttcacaaataaacccatagaaaaaatttgttggtcatttg 1967021  T
Q  346 gatcccacaagattttaaaagattagtctccac 378  Q
    |||||||||||||||||||||||||||||||||    
T  1967022 gatcccacaagattttaaaagattagtctccac 1967054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 33829553 - 33829692
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33829553 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 33829652  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  33829653 aattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 33829106 - 33828993
Alignment:
Q  29 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33829106 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 33829007  T
Q  129 aaaagtgcaattaa 142  Q
    ||||||||||||||    
T  33829006 aaaagtgcaattaa 33828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 10087806 - 10087909
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||| |||||||||||    
T  10087806 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaa 10087905  T
Q  139 ttaa 142  Q
    ||||    
T  10087906 ttaa 10087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 33974247 - 33974350
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||| |||||    
T  33974247 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaa 33974346  T
Q  139 ttaa 142  Q
    ||||    
T  33974347 ttaa 33974350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 3403936 - 3404045
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  3403936 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 3404035  T
Q  138 attaaaccta 147  Q
    ||||| ||||    
T  3404036 attaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 32733944 - 32734056
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||  |||||||||||    
T  32733944 aaatcagaaagggagaaaattatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaa 32734043  T
Q  139 ttaaacctaaaaa 151  Q
    ||||||| |||||    
T  32734044 ttaaaccaaaaaa 32734056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 30388311 - 30388420
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| ||||||||||||||  |||||| ||    
T  30388311 aaatcagaaagggggtaaaaagatggggtgcaaaatcgctcaa--aaaaaaagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtaca 30388408  T
Q  138 attaaacctaaa 149  Q
    ||||||||||||    
T  30388409 attaaacctaaa 30388420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 7654496 - 7654599
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||| || ||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  7654496 aaatcagaaagggggaaaactatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 7654595  T
Q  139 ttaa 142  Q
    ||||    
T  7654596 ttaa 7654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 18242103 - 18242216
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||   |||| ||||    
T  18242103 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgca 18242202  T
Q  138 attaaacctaaaaa 151  Q
    ||||| || |||||    
T  18242203 attaagccaaaaaa 18242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 21032081 - 21031982
Alignment:
Q  43 cagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatta 141  Q
    ||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  21032081 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagttagggg-gaaaagtgcaatta 21031983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 10039764 - 10039674
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||| |||||||||| |  ||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  10039764 aaaagatggggtgtaaaatcgctcataaaaaaaga-ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 22684306 - 22684417
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| ||||||||| | |||||||| |||||||||||||||| |||||||||||||  ||| ||| |||||||||||    
T  22684306 aaatcagaaaggggaaaaactatagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggg-gaaaagtgcaa 22684404  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  22684405 ttaagccaaaaaa 22684417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 22754762 - 22754651
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| ||||||||| | |||||||| |||||||||||||||| |||||||||||||  ||| ||| |||||||||||    
T  22754762 aaatcagaaaggggaaaaactatagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggg-gaaaagtgcaa 22754664  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  22754663 ttaagccaaaaaa 22754651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 29074320 - 29074412
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaa 131  Q
    ||||||||||||| |||||  || ||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||    
T  29074320 aaatcagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaa 29074412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 29079084 - 29079176
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaa 131  Q
    ||||||||||||| |||||  || ||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||    
T  29079084 aaatcagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaa 29079176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 29106893 - 29106985
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaa 131  Q
    ||||||||||||| |||||  || ||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||    
T  29106893 aaatcagaaagggcgaaaactataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaa 29106985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 11656746 - 11656833
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    | ||| | ||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  11656746 aaaagatggggtgcaaaatcgctcaaaaataaagagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaa 11656833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 3403778 - 3403720
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  3403778 aaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 3403720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 18241944 - 18241857
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||     |||| | |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  18241944 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18241857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 22755038 - 22755140
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| |||| |||||||||||||| ||||| ||||  |||  || |||||||||||    
T  22755038 aaatcagaaagggg-aaaactatagggggcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaa 22755136  T
Q  139 ttaa 142  Q
    ||||    
T  22755137 ttaa 22755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 31598720 - 31598782
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacct 146  Q
    ||||| ||||| |||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  31598720 aaaaagatgggatgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaaacct 31598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 21032243 - 21032336
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatgg-ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||||||||    |||||   || || ||||||||||||||||  ||||||||||||| ||||||||||||||| ||||    
T  21032243 aaaagatggggtgcaaaatcgctcaaagaaaaaagaggaggcgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 21032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 2354514 - 2354412
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| | |||||||||||||| |||  ||||| |||||||||| |||||||  |||  ||||||| ||||| |||||    
T  2354514 aaatcagaaagggggaaaactatagggggaaaaatcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagggg-gaaaaatgcaa 2354416  T
Q  139 ttaa 142  Q
    ||||    
T  2354415 ttaa 2354412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggg-gaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 138
Target Start/End: Original strand, 13177004 - 13177102
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||| ||  ||  || |||||||||||||||||||| |||| |||| |||||| |||||||| || |  ||||||| |||||||||||    
T  13177004 aaatcagaaagggggacaactataaggggcaaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagggg-gaaaagtgcaa 13177102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 13579651 - 13579709
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||||||||||||| |||||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgata-gggagaaaagtgcaattaagcctaaaa 13579709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 21032203 - 21032101
Alignment:
Q  45 gaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaa--atatggggtgcaaaatcgcacaattggcaa-aagataggggtgaaaagtgcaatta 141  Q
    ||||||||| ||||||||||||| ||||||||||    ||||  | | |||||||||||||||||||||| ||| ||||||||||  |||||||||| ||    
T  21032203 gaaagggggtaaaagatggggtgaaaaatcgctcaaaaaaaagaagagggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaacta 21032104  T
Q  142 aac 144  Q
    |||    
T  21032103 aac 21032101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 30388150 - 30388065
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    ||||| |  || ||||||||||||||||| |||||||||||||| | |||||||||||||    
T  30388150 aaaagatggggtgcaaaatcgctcaaa-aaaaagagaggctgcaaaatcgcacaattagcaaaagatagggg-ggaaagtgcaattaa 30388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 32733663 - 32733556
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||  ||||||| |||||||||||| |||||| |||||||||| | ||||||||||  |||| ||  |||| ||||     
T  32733663 aaatcagaaaggggaaaaactataggaggcaaaattgctcgtttaaaactatgggatgcaaaatcgtataattggcaaactatagagggaaaaaatgcac 32733564  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  32733563 ttaaacct 32733556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 13176725 - 13176647
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 117  Q
    ||||||||||| |||||||  || ||| |||||||||||| |||||||  ||||| | |||||||| ||||||||||||    
T  13176725 aaatcagaaagtgggaaaactatagggggcaaaatcgctcatttaaaatcatgggatacaaaatcgtacaattggcaaa 13176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 2354769 - 2354861
Alignment:
Q  50 ggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||  || ||| ||||||| |||||||| |||  |||||||||||||||||||||||| ||||  ||||  | ||||| |||||||||    
T  2354769 ggggaaaactatagggggcaaaatggctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaa 2354861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 2762590 - 2762510
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaa 118  Q
    |||||| |||||||| ||||||||| ||||||||||| |||    ||||| | ||||||||||||||||||||| ||||||    
T  2762590 aaatcaaaaagggggcaaaaagatgaggtgcaaaatcactcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaa 2762510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 2762661 - 2762611
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    ||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  2762661 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 10039843 - 10039893
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    ||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  10039843 ggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 12714481 - 12714431
Alignment:
Q  95 tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||||||||||||||||  |||||||||||||  |||||||||||| ||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaattcaacc 12714431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 23250840 - 23250926
Alignment:
Q  40 aatcagaaagggggaaaaagatggggtgcaaaatcgct-cgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    |||||||||||||| |||||||||||| ||||||||||      ||||| | ||||| |||| |||||||||| |||||||||||||    
T  23250840 aatcagaaagggggcaaaagatggggtacaaaatcgctaaaaaaaaaaagagggggtacaaattcgcacaattagcaaaagataggg 23250926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 39723965 - 39724108
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39723965 acatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 39724064  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||||||||||||||||||||||||||||||| || |||||    
T  39724065 aattggcaaaagataggggtgaaaagtgcaattaagccaaaaaa 39724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 13026772 - 13026631
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  13026772 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcac 13026673  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  13026672 aattggcaaaagataggggtgaaaagtgcaattaagcctaaa 13026631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 22851527 - 22851384
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  22851527 acatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcac 22851428  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||| ||||||||||||||||||||||||||||| || |||||    
T  22851427 aattgacaaaagataggggtgaaaagtgcaattaagccaaaaaa 22851384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 9823278 - 9823412
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9823278 acatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 9823377  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||||||||||||    
T  9823378 aattggcaaaagataggggtgaaaagtgcaattaa 9823412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 13027219 - 13027340
Alignment:
Q  29 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13027219 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 13027318  T
Q  129 aaaagtgcaattaaacctaaaa 150  Q
    ||||||||||||||||| ||||    
T  13027319 aaaagtgcaattaaaccaaaaa 13027340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 3307475 - 3307341
Alignment:
Q  9 acatcatcactaaaacacat-gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  3307475 acatcatcactaaaacacatagggggcctccaaatcagaaagggagaaaaagatggggtgcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcac 3307376  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| ||||||||||||||||||| |||||||||    
T  3307375 aattgacaaaagataggggtgaaaaatgcaattaa 3307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 39723539 - 39723415
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39723539 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgggatgcaaaatcgcac 39723440  T
Q  108 aattggcaaaagataggggtgaaaa 132  Q
    |||||||||||||||| ||||||||    
T  39723439 aattggcaaaagatagaggtgaaaa 39723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 9822885 - 9822742
Alignment:
Q  9 acatcatcactaaaacacatggg-ggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  9822885 acatgatcactaaaacacatgggtggcctccaaatcagaaagggggaaaaagatatggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 9822786  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||  |||||||||||||||||||||||||||| || |||||    
T  9822785 aattgataaaagataggggtgaaaagtgcaattaagccaaaaaa 9822742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 13937307 - 13937445
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||||| |||||||    
T  13937307 acatcatcactaaaacacatgggggccttcaaaccagaaagggggaaaaggatgaggtgcaaaatcactcgtttaaaaacatggggtgcaaattcgcaca 13937406  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||| ||||| ||||||| ||||||||||||||| ||||    
T  13937407 attgacaaaaaataggggggaaaagtgcaattaagccta 13937445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 13936853 - 13936726
Alignment:
Q  12 tcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaatt 111  Q
    |||||||||||||| |||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13936853 tcatcactaaaacatatggag-ccttcaaatcagaaagggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaatt 13936756  T
Q  112 ggcaaaagataggggtgaaaagtgcaattaa 142  Q
    || |||||||||||| |||||||||||||||    
T  13936755 ggtaaaagatagggg-gaaaagtgcaattaa 13936726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 15042281 - 15042139
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||| ||||||| |||| |||  ||||||||||||||||||| ||||| |||||||||||||| |||||||  || |||||||||||| ||||    
T  15042281 acatcatcactgaaacacacggggaccttgaaatcagaaagggggaaaatgatggcgtgcaaaatcgctcatttaaaacaatagggtgcaaaatcacaca 15042182  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||||||| ||| | ||||||||||||||||||||||    
T  15042181 attggcaaaagataaggggggaaagtgcaattaaacctaaaaa 15042139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 6092911 - 6092794
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||||||||||||||||  ||||| |||| |||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||    
T  6092911 acatcatcactaaaacacatgggggcctttaaatctgaaaaggggaaaaagatggggtgcaaaatcgttcaattaaaaatatgggatgcaaaatcgcaca 6092812  T
Q  109 attggcaaaagatagggg 126  Q
    |||| |||||||||||||    
T  6092811 attgacaaaagatagggg 6092794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 41662350 - 41662454
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||  | ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41662350 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 41662449  T
Q  138 attaa 142  Q
    |||||    
T  41662450 attaa 41662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 37396814 - 37396705
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  37396814 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaa 37396715  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  37396714 ttaagcctaa 37396705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 24473716 - 24473819
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  24473716 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaa 24473815  T
Q  139 ttaa 142  Q
    ||||    
T  24473816 ttaa 24473819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 6199044 - 6199153
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||  |||||||||||    
T  6199044 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaa 6199143  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  6199144 ttaagcctaa 6199153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 765841 - 765737
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||| ||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  765841 aaatctgaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 765742  T
Q  138 attaa 142  Q
    |||||    
T  765741 attaa 765737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 34498227 - 34498122
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||   || |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||  ||||||||||    
T  34498227 aaatcagaaagggggaaact-atagggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaa 34498129  T
Q  139 ttaaacc 145  Q
    |||||||    
T  34498128 ttaaacc 34498122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 34498503 - 34498613
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||| || ||| ||| |||| || |||||||| |||||||||||||||||||||||| |||||  ||||||| |||||||||||    
T  34498503 aaatcagaaagggggaaaaatatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaa 34498602  T
Q  139 ttaaacctaaa 149  Q
    |||| ||||||    
T  34498603 ttaagcctaaa 34498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 37397093 - 37397206
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||   || ||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||  ||||||| |||||||||||    
T  37397093 aaatcagaaagggggaaatctatagggggcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 37397192  T
Q  139 ttaaacctaaaaat 152  Q
    |||| || ||||||    
T  37397193 ttaagccaaaaaat 37397206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 12281231 - 12281127
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||| ||||||||| |||||||||||||||||||||||||    ||||| | | |||||||||||||||||||||||||||||||||| ||||||||||    
T  12281231 aaatctgaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 12281132  T
Q  138 attaa 142  Q
    |||||    
T  12281131 attaa 12281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 15156132 - 15156236
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||| | |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  15156132 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgca 15156231  T
Q  138 attaa 142  Q
    |||||    
T  15156232 attaa 15156236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 15444595 - 15444707
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || |||   |||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||  ||||||||||    
T  15444595 aaatcagaaagagggaaaactataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaa 15444694  T
Q  139 ttaaacctaaaaa 151  Q
    |||||||||||||    
T  15444695 ttaaacctaaaaa 15444707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 43245978 - 43245874
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||  | ||||| | |||||||||||||||||||||  |||||||||||||  |||||||||    
T  43245978 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgca 43245879  T
Q  138 attaa 142  Q
    |||||    
T  43245878 attaa 43245874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 15442869 - 15442766
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| |||| ||||||| ||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||| ||||||| ||||| |||||    
T  15442869 aaatcacaaagcgggaaaaggatagggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaa 15442770  T
Q  139 ttaa 142  Q
    ||||    
T  15442769 ttaa 15442766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 22851903 - 22851970
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  22851903 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagacgaggtgcaaaatcgc 22851970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 24473449 - 24473334
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||| |||  || ||| |||||||||||| ||||||| |||||||||||||||| |||||||||||||  |||||||  ||||||||||    
T  24473449 aaatcagaaaggggggaaactatagggggcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaa 24473350  T
Q  139 ttaaacctaaaaataa 154  Q
    |||| || ||||||||    
T  24473349 ttaagccaaaaaataa 24473334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 152
Target Start/End: Complemental strand, 6198764 - 6198651
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||| ||||||||  || ||| |||||||||||||||||||| ||| |||||||||||||||||||||| | |  ||| ||| |||||||||||    
T  6198764 aaatcagaaatggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaa 6198665  T
Q  139 ttaaacctaaaaat 152  Q
    |||| |||||||||    
T  6198664 ttaagcctaaaaat 6198651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 17431393 - 17431290
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||| |||| ||||||||||||||| ||||  ||| ||| |||||||||||    
T  17431393 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaa 17431294  T
Q  139 ttaa 142  Q
    ||||    
T  17431293 ttaa 17431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 20861586 - 20861689
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||  |||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||  |||| |||||    
T  20861586 aaatcagaaagggggaaaattataggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaa 20861685  T
Q  139 ttaa 142  Q
    ||||    
T  20861686 ttaa 20861689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 41662627 - 41662524
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||| |||||||| |||||  || ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  41662627 aaattagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaa 41662528  T
Q  139 ttaa 142  Q
    ||||    
T  41662527 ttaa 41662524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 16929047 - 16928938
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||||||||||||||||| |||||    ||||| | ||||||||||||||||||||| |||||||||||||| | ||||||||    
T  16929047 aaatcagaaagggggcaaaaagatggggtgcaaaa-cgctcaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgca 16928950  T
Q  138 attaaacctaaa 149  Q
    ||||| ||||||    
T  16928949 attaagcctaaa 16928938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 25439102 - 25439180
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacct 146  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||  ||||||||||||||||||    
T  25439102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-aaaaagtgcaattaaacct 25439180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 33727053 - 33727160
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||  |||||||||||||||||| |||||  |||  || |||||||| ||    
T  33727053 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaa 33727152  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  33727153 ttaaacct 33727160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 15155973 - 15155880
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||    
T  15155973 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaa 15155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 37752176 - 37752087
Alignment:
Q  54 aaaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||    |||||  ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  37752176 aaaaagatggggtgcaaaatcgctcaaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaa 37752087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 9623608 - 9623505
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||  |||||||  || ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||| |   ||||||||||    
T  9623608 aaatcagaaaaagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaa 9623509  T
Q  139 ttaa 142  Q
    ||||    
T  9623508 ttaa 9623505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 16929207 - 16929293
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| ||    ||||| | ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  16929207 aaaagatggggtgcaaaatcgttcaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaa 16929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 25438856 - 25438795
Alignment:
Q  81 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  25438856 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 2856632 - 2856520
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || |||   |||||||  ||||| ||| ||||||||||||||||||||||||||||||  ||||||  ||||| | |||    
T  2856632 aaatcagaaagggggaaaactataggggataaaatcgaacgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaa 2856533  T
Q  139 ttaaacctaaaaa 151  Q
    |||| ||||||||    
T  2856532 ttaagcctaaaaa 2856520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 43246139 - 43246227
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    |||||  | ||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  43246139 aaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaa 43246227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 16169279 - 16169177
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| | ||||| |||||||||||| |||| |||||||||| ||||||||||||||  ||| || ||||||||||||    
T  16169279 aaatcagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaa 16169181  T
Q  139 ttaa 142  Q
    ||||    
T  16169180 ttaa 16169177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 37752381 - 37752467
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| |||||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  37752381 aaaatatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 37752467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 74932 - 75016
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatag 123  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||| | ||||||||||||||||||||| |||||||||||    
T  74932 aaatcagaaagggggcaaaaagatggggtgcaaaatcgct-aaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatag 75016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 12281390 - 12281486
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||| ||||| ||||||||||    ||||| | |||||||||||||||||||||  ||||||||| ||| ||||||||||||||| || |||||    
T  12281390 aaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccaaaaaa 12281486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 15043731 - 15043838
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||| || |||||  | |||||| |||||||||||||||||| ||||| |  ||||||||| |||||| |||||||||||||  || ||| |||    
T  15043731 aaatcagaaaaggagaaaagaacggggtgtaaaatcgctcgtttaaaactatggagcacaaaatcgcgcaattgtcaaaagatagggg-aaagagtccaa 15043829  T
Q  139 ttaaaccta 147  Q
    |||||||||    
T  15043830 ttaaaccta 15043838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 15444317 - 15444214
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| ||||||||||||  || ||| |||||||||||||||||||| |||||  || ||||| | ||||||||||||  |||| || ||||| |||||    
T  15444317 aaatcataaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaa 15444218  T
Q  139 ttaa 142  Q
    ||||    
T  15444217 ttaa 15444214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 23123400 - 23123341
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| |||||||| ||||||||||||||| ||||||||||| | |||||||||||||||    
T  23123400 aaaaagatggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 23123341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 37752221 - 37752154
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgc 105  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| |||||||||||||||||    
T  37752221 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgc 37752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 34313852 - 34313754
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataa 154  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||  ||||||||||||||| || ||||| ||    
T  34313852 aaaagatagggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggg--gaaaagtgcaattaagccaaaaaaaaa 34313756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 3463903 - 3463996
Alignment:
Q  49 gggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| |||||||||||||||||||||||||     |||  |  |||||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  3463903 ggggtaaaaagatggggtgcaaaatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaa 3463996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 22851958 - 22852007
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaa 22852007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 18020053 - 18020137
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||   ||||||||||||||    
T  18020053 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggg--taaaagtgcaattaa 18020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 16169555 - 16169658
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| |||  | |||||| | |||||||||  |||  ||||||  |||||||||||    
T  16169555 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaa 16169654  T
Q  139 ttaa 142  Q
    ||||    
T  16169655 ttaa 16169658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 22786892 - 22786837
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||||||||| ||||||| | ||||||||||||  ||||||||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaacctaa 22786837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatta 141  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagatagggg-gaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 7127789 - 7127877
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaa--aatatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    |||||||||||||||||||||||| |  |||  || ||||||||||||||| | ||||| || ||||||||||||  ||||||||||||    
T  7127789 aaaagatggggtgcaaaatcgctcataaaaaagaagatggggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaatt 7127877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 74773 - 74689
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||| ||||||||||||||     ||||| | ||||||||||||||||||||| ||||||||| || | |||||||||||||||    
T  74773 aaaagatgaggtgcaaaatcgctaaa--aaaaaaaaggggtgcaaaatcgcacaattagcaaaagat-ggagggaaaagtgcaattaa 74689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 74864 - 74915
Alignment:
Q  94 gtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  74864 gtgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaac 74915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 138
Target Start/End: Complemental strand, 7127702 - 7127660
Alignment:
Q  95 tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  7127702 tgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 18020013 - 18019915
Alignment:
Q  45 gaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaa--atatggggtgcaaaatcgcacaatt-ggcaaaagataggggtgaaaagtgcaatt 140  Q
    |||| |||| ||||||||||||||||||||||||    | ||  | | ||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  18020013 gaaaaggggcaaaagatggggtgcaaaatcgctcaaaaagaagaagagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 43598747 - 43598790
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagatagggg 126  Q
    |||||||  |||||||||||||||||||| ||||||||||||||    
T  43598747 aaaaatagagggtgcaaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 3463820 - 3463873
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  3463820 ggggtacaaaatcgcacaattggcaaaaagataggggt-aaatgtgcaattaaac 3463873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 9465838 - 9465908
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    |||| |||||||||||||| ||||    ||||| | |||||||||||||||||||||  ||||||||||||    
T  9465838 aaaaaatggggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 9623864 - 9623932
Alignment:
Q  75 gctcgtttaaaa--atatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||  ||||||||||||||||| ||| |||||||||  ||| || ||||||||||||||||    
T  9623864 gctcgtttaaaactatatggggtgcaaaatcacacgattggcaaactata-ggatgaaaagtgcaattaa 9623932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 7127913 - 7127977
Alignment:
Q  82 taaaaatatggggtgcaaaatcgcac-aattggcaaaagataggggtgaaaagtgcaattaaacct 146  Q
    |||||| || |||||||||||||||| |||| |||||||||| |||  ||||||||||||||||||    
T  7127913 taaaaagatagggtgcaaaatcgcacaaattagcaaaagata-gggaaaaaagtgcaattaaacct 7127977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 43162285 - 43162237
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatatagggg-gaaaagtgcaattaa 43162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 11007707 - 11007655
Alignment:
Q  93 ggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||| ||||||||||||||||| |||||||||||   ||||||||||||||||    
T  11007707 ggtgtaaaatcgcacaattggcaaaaagatagggagcaaaagtgcaattaaac 11007655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 23123517 - 23123566
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| |||||||||| ||  | |||||||||||||    
T  23123517 ggggtgcaaaatcgcacaattagcaaaagataagg--ggaaagtgcaattaa 23123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 44599626 - 44599479
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44599626 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 44599527  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataaa 155  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  44599526 aattggcaaaagataggggtgaaaagtgcaattaagccaaaaattaaa 44599479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 13863450 - 13863304
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13863450 acatcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 13863351  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataa 154  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  13863350 aattggcaaaagataggggtgaaaaatgcaattaagcctaaaaataa 13863304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 13863875 - 13864007
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13863875 acatcatcactaaaacacatcggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgc-aaatcgcaca 13863973  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||||||||||||    
T  13863974 attggcaaaagataggggtgaaaagtgcaattaa 13864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 44600073 - 44600186
Alignment:
Q  29 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44600073 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 44600172  T
Q  129 aaaagtgcaattaa 142  Q
    ||||||||||||||    
T  44600173 aaaagtgcaattaa 44600186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 8643684 - 8643824
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  8643684 acatcatcgctaaaacacataggggccttcaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaaatcgcaca 8643783  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  8643784 attggtaaaagatagggatgaaaagtgcaattaagcctaaa 8643824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 46816229 - 46816369
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||| ||||| | |||||||||| |||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  46816229 acatcatcattaaaatatatgggggccttcaaaccagaaaggggaaaaatgatggggtacaaaatcgctcgtttaaaaatatggggtgcaaaatcgcata 46816328  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||| ||||||||| ||  |||||||||||||| ||||||    
T  46816329 attggtaaaagatagcgggaaaaagtgcaattaagcctaaa 46816369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 20418994 - 20418877
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  20418994 aaatcagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 20418895  T
Q  139 ttaaacctaaaaataaaa 156  Q
    ||||||||||||| ||||    
T  20418894 ttaaacctaaaaaaaaaa 20418877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 10533140 - 10533024
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  10533140 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 10533041  T
Q  139 ttaaacctaaaaataaa 155  Q
    |||| |||| |||||||    
T  10533040 ttaagcctagaaataaa 10533024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 37888939 - 37888836
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  37888939 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 37888840  T
Q  139 ttaa 142  Q
    ||||    
T  37888839 ttaa 37888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 18864073 - 18863967
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  18864073 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 18863974  T
Q  139 ttaaacc 145  Q
    |||||||    
T  18863973 ttaaacc 18863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 37972344 - 37972457
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||| |||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  37972344 aaatctgaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 37972443  T
Q  139 ttaaacctaaaaat 152  Q
    |||| ||| |||||    
T  37972444 ttaagccttaaaat 37972457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 22740262 - 22740150
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  22740262 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 22740163  T
Q  139 ttaaacctaaaaa 151  Q
    |||| ||| ||||    
T  22740162 ttaagccttaaaa 22740150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 37889207 - 37889315
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  37889207 aaatcagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 37889306  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  37889307 ttaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 9412272 - 9412383
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||| ||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  9412272 aaatctgaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 9412371  T
Q  138 attaaacctaaa 149  Q
    ||||| ||||||    
T  9412372 attaagcctaaa 9412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 20419272 - 20419375
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  20419272 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 20419371  T
Q  139 ttaa 142  Q
    ||||    
T  20419372 ttaa 20419375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 37972066 - 37971957
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||| |||||||||||    
T  37972066 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaa 37971967  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  37971966 ttaagcctaa 37971957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 3687604 - 3687707
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  3687604 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 3687702  T
Q  138 attaa 142  Q
    |||||    
T  3687703 attaa 3687707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 9034974 - 9034862
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||  ||||||| ||||||||||    
T  9034974 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgca 9034875  T
Q  138 attaaacctaaaa 150  Q
    ||||| |||||||    
T  9034874 attaagcctaaaa 9034862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 9035240 - 9035344
Alignment:
Q  39 aaatcagaaagggg-gaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||||||| |||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  9035240 aaatcagaaaggggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgca 9035339  T
Q  138 attaa 142  Q
    |||||    
T  9035340 attaa 9035344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 3205041 - 3205144
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| || |||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  3205041 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 3205140  T
Q  139 ttaa 142  Q
    ||||    
T  3205141 ttaa 3205144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 17157073 - 17156970
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  17157073 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 17156974  T
Q  139 ttaa 142  Q
    ||||    
T  17156973 ttaa 17156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 42418976 - 42419084
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatat-ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||  ||||||| ||||||||||    
T  42418976 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagggg-gaaaagtgca 42419074  T
Q  138 attaaaccta 147  Q
    ||||||||||    
T  42419075 attaaaccta 42419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 13741663 - 13741560
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||| ||||| |||||    
T  13741663 aaatcagaaagtgggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaa 13741564  T
Q  139 ttaa 142  Q
    ||||    
T  13741563 ttaa 13741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 13744181 - 13744283
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| ||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  13744181 aaatcaaaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 13744279  T
Q  139 ttaa 142  Q
    ||||    
T  13744280 ttaa 13744283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 29293028 - 29292925
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| |||  ||||| |||||||||||||||||||||||  ||||||| |||||||||||    
T  29293028 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 29292929  T
Q  139 ttaa 142  Q
    ||||    
T  29292928 ttaa 29292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 18864350 - 18864457
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||  ||||||| ||||||| |||    
T  18864350 aaatcagaaagggggaaaactatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtacaa 18864448  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  18864449 ttaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 29293294 - 29293397
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| |||  |||| ||||||||||||||||||||||||  ||||||| ||||| |||||    
T  29293294 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaa 29293393  T
Q  139 ttaa 142  Q
    ||||    
T  29293394 ttaa 29293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 22740550 - 22740643
Alignment:
Q  50 ggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||    
T  22740550 ggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaaac 22740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 46815304 - 46815195
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||||| ||||| || | |||||||||||||||||||| ||||| |||||| |||| | ||||||||||||| | ||||| || |||||    
T  46815304 acatcatcactaaaacatatgggagcattcaaatcagaaagggggaaaatgatggagtgcaagatcgtttgtttaaaaatatgagatgcaagattgcaca 46815205  T
Q  109 attggcaaaa 118  Q
    |||| |||||    
T  46815204 attgacaaaa 46815195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 3204773 - 3204672
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||  | |||||||||    
T  3204773 aaatcagaaagagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggg--ggaaagtgcaa 3204676  T
Q  139 ttaa 142  Q
    ||||    
T  3204675 ttaa 3204672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 36527746 - 36527849
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||||| |||||||||||| ||||||||||  ||| | | ||||| |||||    
T  36527746 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaa 36527845  T
Q  139 ttaa 142  Q
    ||||    
T  36527846 ttaa 36527849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 38826861 - 38826964
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||| || |||||||||| |||| |||||||||||||||||||| ||||  ||||||| ||||| |||||    
T  38826861 aaatcagaaagggggaaaactatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaa 38826960  T
Q  139 ttaa 142  Q
    ||||    
T  38826961 ttaa 38826964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 48359424 - 48359323
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||   || ||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  48359424 aaatcagaaagggggaaact-atagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 48359327  T
Q  139 ttaa 142  Q
    ||||    
T  48359326 ttaa 48359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 48359606 - 48359707
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| ||| |||| ||||||||||||||||||||| |||  |||||||  ||||||||||    
T  48359606 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactatagggg-aaaaagtgcaa 48359704  T
Q  139 tta 141  Q
    |||    
T  48359705 tta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 42418697 - 42418594
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||| ||||||||||||||  || ||| |||||||||||||||||||| ||| || | ||||||||||||||| |||||  ||||||| |||||||| ||    
T  42418697 aaattagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaa 42418598  T
Q  139 ttaa 142  Q
    ||||    
T  42418597 ttaa 42418594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 23686683 - 23686777
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||||||||||||||||||||    ||||| | ||||| ||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||    
T  23686683 aaaagatggggtgcaaaatcgctccaaaaaaaaga-ggggt-caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcctaaaaa 23686777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 36527489 - 36527383
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  ||  || | ||||| | |||||||||| ||||||||||||||||||||||||| ||||  |||||||  ||||||||||    
T  36527489 aaatcagaaaggggaaaaactataaggggaaaaattgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-aaaaagtgcaa 36527391  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  36527390 ttaaacct 36527383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 15567246 - 15567327
Alignment:
Q  63 gggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||    ||||||||| ||||||||||||||| |   |||||||||||||| ||||||||||||||||||||    
T  15567246 gggtgcaaaatcgctcaaaaaaaaatatgcggtgcaaaatcgcacta---gcaaaagataggggggaaaagtgcaattaaaccta 15567327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 13772702 - 13772638
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    |||| ||||||||||||||| ||||||| |||||||||||||  ||||||||||||||| |||||    
T  13772702 aaaagatggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcctaa 13772638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 9412113 - 9412026
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||| ||||||||||    ||||| | |||||||||||||||||||||  ||||||||| ||| |||||||||||||||    
T  9412113 aaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 9412026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 13772901 - 13772952
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaa 13772952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 27096306 - 27096395
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||| |||||||||||||||||||    || || | ||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  27096306 aaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagatagggg-gaaaagtgcaattaaacc 27096395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 27181997 - 27181908
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||| |||||||||||||||||||    || || | ||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  27181997 aaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagatagggg-gaaaagtgcaattaaacc 27181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 5735344 - 5735255
Alignment:
Q  54 aaaaagatggggtgcaaaatcgctcgtttaaaaatatggg-gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||| |||||||||||||||    ||||| |  || |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  5735344 aaaaagatgtggtgcaaaatcgctcaaaaaaaaaaaaaggagtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaa 5735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 6908265 - 6908207
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggg-gaaaagtgcaattaagcctaaaaa 6908207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 29291896 - 29291809
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||| ||||||||||    ||||| | |||||||||||||||| ||||  ||||||||||||   ||||||||||||||    
T  29291896 aaaagatggggtgtaaaatcgctctaaaaaaaagagggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaa 29291809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 5349724 - 5349781
Alignment:
Q  82 taaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||| |||||||||||||||||||||||  |||||||||||||   |||||||||||||    
T  5349724 taaaaagatggggtgcaaaatcgcacaattaacaaaagatagggg---aaagtgcaattaa 5349781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 8953863 - 8953939
Alignment:
Q  62 ggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||   | ||||| | |||||||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  8953863 ggggtgcaaaatcgct---taaaaaagagggggtgcaaaattgcacaattaacaaaagatagggg-gaaaagtgcaattaa 8953939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 18925114 - 18925056
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||| |||||||| |||||||||||||  ||||||||||||||| || |||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagccaaaaaa 18925056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 3687445 - 3687356
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagata-ggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||    |||||  | |||||||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  3687445 aaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaa 3687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 5735470 - 5735376
Alignment:
Q  45 gaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaa 143  Q
    ||||||||| ||||||||| |||||||||||||      |||| |  ||||||||||||||||||||||| |||||||||||   |||||||||| ||||    
T  5735470 gaaagggggtaaaagatggtgtgcaaaatcgct------aaaaaaaagggtgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaaataaa 5735377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 16198967 - 16199028
Alignment:
Q  81 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||| ||||||||||||||||||||||||||||||  |||  ||  ||||||||||||||    
T  16198967 ttaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaa 16199028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 6908485 - 6908536
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||| |||||| ||||||| | |||||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaatagggg-ggaaagtgcaattaaac 6908536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 15567079 - 15567019
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaa 118  Q
    ||||||||||||||||||||||||    ||||||| ||||||||||||||||||||| ||||||    
T  15567079 aaaagatggggtgcaaaatcgctcaa--aaaaata-ggggtgcaaaatcgcacaattagcaaaa 15567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 23686473 - 23686414
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaat 152  Q
    ||||||||||| | |||||| |||||||||||||| ||||||||||||||| || ||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatagggg-gaaaagtgcaattaagccaaaaaat 23686414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 33628653 - 33628709
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatt 140  Q
    |||| ||||||||||||||||||||||| | ||||||||| ||  ||||||||||||    
T  33628653 aaaagatggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatt 33628709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 18925229 - 18925280
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatta 141  Q
    |||||||||||||||||||||||| ||||||||||||  |||||| ||||||    
T  18925229 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatta 18925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 18925315 - 18925371
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| ||||||||||||||||||||||| |||||| |||| |  |||||||||||||||    
T  18925315 aaaaaatggggtgcaaaatcgcacaattagcaaaatatagag--gaaaagtgcaattaa 18925371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 27096262 - 27096167
Alignment:
Q  49 gggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaa 143  Q
    ||||| ||||||| ||||| ||||| ||||    ||||| | ||| ||||||||||||||||||| |||| ||||||||  |||||||||||||||    
T  27096262 gggggcaaaagatagggtgaaaaattgctcaaaaaaaaagaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaa 27096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 27182041 - 27182136
Alignment:
Q  49 gggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaa 143  Q
    ||||| ||||||| ||||| ||||| ||||    ||||| | ||| ||||||||||||||||||| |||| ||||||||  |||||||||||||||    
T  27182041 gggggcaaaagatagggtgaaaaattgctcaaaaaaaaagaggggttgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaa 27182136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 35080021 - 35079963
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||  |||||||||| | ||||||| |||||||||||||| |||||||||||||||    
T  35080021 aaaaatagtgggtgcaaaaccccacaattagcaaaagatagggg-gaaaagtgcaattaa 35079963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 5349550 - 5349497
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaatt 111  Q
    ||||||||||||||||||||||||    ||||| | |||||||||||||||||||||    
T  5349550 aaaagatggggtgcaaaatcgctc---aaaaaaaagggggtgcaaaatcgcacaatt 5349497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 5349709 - 5349747
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgc 76  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5349709 aaatcagaaagggggtaaaaagatggggtgcaaaatcgc 5349747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 38191566 - 38191616
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||| ||||  |||||||||||||| |||| |||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaa 38191616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 30857902 - 30857955
Alignment:
Q  89 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||| ||||||||| ||||||||| | |  ||||||||||||||    
T  30857902 atggggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaa 30857955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  93 ggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatta 141  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagatagggg-aaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 34235978 - 34236010
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagatag 123  Q
    ||||||||||||||||||||| |||||||||||    
T  34235978 ggggtgcaaaatcgcacaattagcaaaagatag 34236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 36096392 - 36096535
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36096392 acatcatcactaaaacacatggggggcctccaaatcagaaaggggaaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 36096491  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  36096492 aattggcaaaagataggggtgaaaagtgcaattaaaccaaaaaa 36096535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 50679341 - 50679475
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  50679341 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtac 50679440  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||||||||||||    
T  50679441 aattggcaaaagataggggtgaaaagtgcaattaa 50679475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 43050744 - 43050606
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  43050744 acatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcactcgtttaaaaacatggggtgcaaaatcgcac 43050645  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacct 146  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  43050644 aattggtaaaagatagggatgaaaagtgcaattaaacct 43050606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 43051169 - 43051303
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  43051169 acatcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacac 43051268  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||| |||||||||    
T  43051269 aattggcaaaagataggggtgaaaaatgcaattaa 43051303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 50678895 - 50678777
Alignment:
Q  29 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50678895 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 50678796  T
Q  129 aaaagtgcaattaaaccta 147  Q
    |||||||||||||| ||||    
T  50678795 aaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 56505830 - 56505691
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  56505830 acatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcac 56505731  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  56505730 aattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 36095953 - 36095820
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  36095953 acatcatcactaaaatacatggggggcctccaaatcagaaagggg-aaaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 36095855  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||| |||||||||    
T  36095854 aattggcaaaagataggggtgaaaaatgcaattaa 36095820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 45830115 - 45830255
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  45830115 acatcatcactaaaacatatggggggctccaaatcagaaagggg-aaaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaaatcgcaca 45830213  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    |||| ||||||||||||||||||||||| ||||| |||||||    
T  45830214 attgacaaaagataggggtgaaaagtgcgattaagcctaaaa 45830255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 56506491 - 56506630
Alignment:
Q  9 acatcatcactaaaacacatg-ggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||  ||||||| |||| || |||||| ||||    
T  56506491 acatcatcactaaaacacacgaggggccttcaaatcagaaagggggaaaatgatggggtgcaaaatcgctcaattaaaaacatggagtacaaaattgcac 56506590  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  56506591 aattggcaaaagataagggtgaaaagtgcaattaagccta 56506630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 47219122 - 47219265
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||| ||||||||||||||||    ||||||||||||||||| ||||||||| ||||||||| ||  |||||||||||||||    
T  47219122 acatcatcactaaaacacatggagggcctccaaatcaga----gggaaaaagatggggtgtaaaatcgctggtttaaaaacataaggtgcaaaatcgcac 47219217  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataaa 155  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| ||||    
T  47219218 aattagcaaaagatagaggtgaaaaatgcaattaaacctaaaattaaa 47219265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 39744400 - 39744526
Alignment:
Q  26 catgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    ||||||| || | |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||    
T  39744400 catggggaccacaaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggg 39744499  T
Q  126 gtgaaaagtgcaattaaacctaaaaat 152  Q
    | ||||||||||||||| |||||||||    
T  39744500 gggaaaagtgcaattaagcctaaaaat 39744526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 28196452 - 28196343
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  28196452 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaa 28196353  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  28196352 ttaagcctaa 28196343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 28196691 - 28196824
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||   ||||||| ||   |||||||||||||||||||  || ||| |||||||||||||||||||| |||||||||||||||||||||    
T  28196691 acatcatcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcaca 28196790  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||  ||||||| |||||||||||||||    
T  28196791 attggcaaactataggggggaaaagtgcaattaa 28196824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 4239314 - 4239417
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||  ||||||||||    
T  4239314 aaatcagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaa 4239413  T
Q  139 ttaa 142  Q
    ||||    
T  4239414 ttaa 4239417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 32703568 - 32703715
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||   ||||||| ||   |||||||||| ||||||||  || ||| |||||||||||||||||||| |||||||||||||||||||||    
T  32703568 acatcatcactaaatgtcatggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcaca 32703667  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaacctaaaaataaaa 156  Q
    |||||||||  ||||||| ||||||||||||||| || ||||| ||||    
T  32703668 attggcaaactataggggggaaaagtgcaattaagccaaaaaaaaaaa 32703715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 25161983 - 25161881
Alignment:
Q  40 aatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaat 139  Q
    ||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  25161983 aatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaat 25161884  T
Q  140 taa 142  Q
    |||    
T  25161883 taa 25161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 45829130 - 45828997
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||||| || | ||| | |||||||||| | |||||||||||||| |||||||||||| |||||| || || |||| ||||||||||||    
T  45829130 acatcatcactaaaacatatagaggcattcaaatcagaacgagggaaaaagatgggatgcaaaatcgcttgtttaataacattgggtacaaaatcgcaca 45829031  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| |||||||||| ||||||||| |||||||    
T  45829030 attggtaaaagataggagtgaaaagtacaattaa 45828997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 9023350 - 9023238
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| ||||||||||||  || ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  9023350 aaatcataaagggggaaaactatagggggcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaa 9023251  T
Q  139 ttaaacctaaaaa 151  Q
    |||| ||||||||    
T  9023250 ttaagcctaaaaa 9023238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 9380689 - 9380797
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||| |||||||||||    
T  9380689 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 9380788  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  9380789 ttaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 9380413 - 9380310
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||| |||||||||||    
T  9380413 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 9380314  T
Q  139 ttaa 142  Q
    ||||    
T  9380313 ttaa 9380310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 16555764 - 16555868
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  16555764 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgca 16555863  T
Q  138 attaa 142  Q
    |||||    
T  16555864 attaa 16555868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 9023628 - 9023731
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  9023628 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 9023727  T
Q  139 ttaa 142  Q
    ||||    
T  9023728 ttaa 9023731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 23540200 - 23540303
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| | |||||||||||||||||| ||| ||||||||||||||||||||| ||||  |||||||||||||||||||    
T  23540200 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaa 23540299  T
Q  139 ttaa 142  Q
    ||||    
T  23540300 ttaa 23540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 32703331 - 32703228
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| || |||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  32703331 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaa 32703232  T
Q  139 ttaa 142  Q
    ||||    
T  32703231 ttaa 32703228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 11529305 - 11529171
Alignment:
Q  9 acatcatcactaaaacacatg-ggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||| ||| |||| || ||||  | |||| ||||||| |||| ||||||||||||| || ||||||| ||||||||||||||| |||    
T  11529305 acatcatcactaaaacatatgaggggacttcaaactaaaaagagggaaaatgatgtggtgcaaaatcgcacgattaaaaacatggggtgcaaaatcacac 11529206  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||| |||||  |||||||||||||||    
T  11529205 aattggcaaaagttagggaggaaaagtgcaattaa 11529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 39744136 - 39744027
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||  |||||||  ||||||||||    
T  39744136 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaa 39744037  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  39744036 ttaagcctaa 39744027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 169120 - 169016
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagata-ggggtgaaaagtgca 137  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||    
T  169120 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgca 169021  T
Q  138 attaa 142  Q
    |||||    
T  169020 attaa 169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 293152 - 293268
Alignment:
Q  26 catgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    ||||||||||   |||||||||||||||||||  ||  || |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||    
T  293152 catgggggccataaaatcagaaagggggaaaactatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggg 293251  T
Q  126 gtgaaaagtgcaattaa 142  Q
    |  ||||||||||||||    
T  293252 ggaaaaagtgcaattaa 293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 169387 - 169490
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| ||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| ||||| |||||    
T  169387 aaatcaaaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaa 169486  T
Q  139 ttaa 142  Q
    ||||    
T  169487 ttaa 169490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 39086571 - 39086674
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||  |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  39086571 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaa 39086670  T
Q  139 ttaa 142  Q
    ||||    
T  39086671 ttaa 39086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 43292143 - 43292040
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||  ||||||||||    
T  43292143 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaa 43292044  T
Q  139 ttaa 142  Q
    ||||    
T  43292043 ttaa 43292040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 292888 - 292779
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||   | ||| |||||||||||||||||||| |||| | |||||||| ||||||||||||||  ||||||| |||||||||||    
T  292888 aaatcagaaagggggaaaactgtagggggcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaa 292789  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  292788 ttaagcctaa 292779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 3930427 - 3930535
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  3930427 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgca 3930525  T
Q  138 attaaaccta 147  Q
    ||||| ||||    
T  3930526 attaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 48406097 - 48405965
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||||||||||   ||||||| ||   || ||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||| ||| |    
T  48406097 acatcatcactaaatgtcatggggaccataaagtcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcata 48405998  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||  ||||||| |||||||||||||||    
T  48405997 attggcaaactatagggg-gaaaagtgcaattaa 48405965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 13198711 - 13198604
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgc 136  Q
    ||||||||||||||| |||||||||||||||||||||||||    |||||  | ||||||||||||||||||||||||||||||||  || |||||||||    
T  13198711 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgc 13198612  T
Q  137 aattaaac 144  Q
    ||||||||    
T  13198611 aattaaac 13198604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 26207694 - 26207797
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || ||| |||||||||||||||| |||  |||||||||||||||||||||||||||||  ||||||| ||||| |||||    
T  26207694 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaa 26207793  T
Q  139 ttaa 142  Q
    ||||    
T  26207794 ttaa 26207797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 48406333 - 48406438
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||| | ||||| |||    
T  48406333 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattatagggg-ggaaagtacaa 48406431  T
Q  139 ttaaacc 145  Q
    |||||||    
T  48406432 ttaaacc 48406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 23539945 - 23539839
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||| || ||| ||||||||| |||||| ||| ||||||||||||||||||||||||||||||  ||||||  | |||||||||    
T  23539945 aaatcagaaaggaggaaaaatatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggg--ggaaagtgcaa 23539848  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  23539847 ttaagccta 23539839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 25162261 - 25162348
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggg 126  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||| |||||||||| |||||||| ||||| |||||||    
T  25162261 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatatagggg 25162348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 26207466 - 26207364
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || ||| |||||||||||||||| |||  |||||||||||||||||||||||||||||  ||||||| | |||||||||    
T  26207466 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactatagggg-ggaaagtgcaa 26207368  T
Q  139 ttaa 142  Q
    ||||    
T  26207367 ttaa 26207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 43292306 - 43292408
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||  | ||||| ||||| |||||    
T  43292306 aaatcagaaagggg-aaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaa 43292404  T
Q  139 ttaa 142  Q
    ||||    
T  43292405 ttaa 43292408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 44468871 - 44468958
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggg 126  Q
    |||||||||||| ||||||  || ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||    
T  44468871 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggg 44468958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 49178779 - 49178866
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatta 141  Q
    ||||||||||||||||||||||||    |||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49178779 aaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 18077167 - 18077253
Alignment:
Q  56 aaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18077167 aaagatgggatgcaaaatcgctcaacaaaaaagagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaa 18077253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 35393741 - 35393826
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||| |  ||||| | |||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  35393741 aaaagatggggtgcaaaatcgctcata-aaaaagagggggtgcaaattcgcacaattagcaaaagata-gggtgaaaagtgcaattaa 35393826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 12758152 - 12758262
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||||| |||||||||||| ||||| |||||||| | || ||||||||||  ||| ||   ||||||||||    
T  12758152 aaatcagaaagggggaaaactatagggggcaaaattgctcgtttaaaactatggcgtgcaaaaacacataattggcaaactata-ggaaaaaaagtgcaa 12758250  T
Q  139 ttaaacctaaaa 150  Q
    ||||||||||||    
T  12758251 ttaaacctaaaa 12758262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 13198870 - 13198957
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||     |||| | |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  13198870 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 13198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 24775776 - 24775834
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| |||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  24775776 aaaagatggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 24775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 39415314 - 39415244
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    ||||||||||||||||||||||||   |||||| |  |||||||||||||||||||| |||||||||||||    
T  39415314 aaaagatggggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaattagcaaaagataggg 39415244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 11241653 - 11241717
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||    
T  11241653 aaaaagatggggtgcaaaatcccacaattggcaaaagatagggg-gaaaagtacaattaagcctaa 11241717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 11530154 - 11530230
Alignment:
Q  46 aaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatag 123  Q
    |||||||||||| ||| |||||||||||||| || |||||||||| |||| ||||||||||||||||| |||| ||||    
T  11530154 aaagggggaaaaggattgggtgcaaaatcgcacgattaaaaatat-gggttcaaaatcgcacaattggtaaaaaatag 11530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 156
Target Start/End: Complemental strand, 23432577 - 23432465
Alignment:
Q  45 gaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaa 143  Q
    ||||||||| ||||||  ||||||||||| | || |||||||| |||||||||| ||| ||||||||| | |||| |||||||  ||||||||||||||     
T  23432577 gaaagggggcaaaagagagggtgcaaaattgttcatttaaaaagatggggtgcagaattgcacaattgacaaaaaaatagggggcaaaagtgcaattaag 23432478  T
Q  144 cctaaaaataaaa 156  Q
    |||| ||| ||||    
T  23432477 cctataaagaaaa 23432465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 16555569 - 16555512
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    |||||||||||||||||||||  ||||||||| ||| ||||||||||||||| |||||    
T  16555569 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcctaa 16555512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 8182046 - 8181994
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaa 8181994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 8182172 - 8182224
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaa 8182224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 12757872 - 12757766
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| || ||||  || |||  ||||||||||||||||||| |||| | |||||||||||||||||| ||||  ||||  | ||||||| |||    
T  12757872 aaatcagaaagaggaaaaactataggggacaaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatagaag-gaaaagtacaa 12757774  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  12757773 ttaaacct 12757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 22681628 - 22681578
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagatagggg-ggaaagtgcaattaa 22681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 25225399 - 25225449
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||||||||||| |  | ||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaa 25225449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 49178694 - 49178644
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  49178694 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 5206049 - 5205984
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    |||| |||||||||||||||||  ||||  ||||||||||||  ||||||||||||||| ||||||    
T  5206049 aaaagatggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcctaaa 5205984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 39912463 - 39912508
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattg 112  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  39912463 gcaaaatcactcgtttaaaactatgggatgcaaaatcgcacaattg 39912508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 23433433 - 23433516
Alignment:
Q  38 caaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagata 122  Q
    ||||||||||||||| ||||| |  ||||||||||||||||  ||||||| |  || |||| ||||||||||||| |||||||||    
T  23433433 caaatcagaaaggggcaaaaa-agagggtgcaaaatcgctcacttaaaaagaaaggatgcacaatcgcacaattgacaaaagata 23433516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 3930268 - 3930182
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||| ||||   ||||||||||||  ||||||||||||||    
T  3930268 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcataattaataaaagatagggg-aaaaagtgcaattaa 3930182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 39415485 - 39415575
Alignment:
Q  49 gggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| |||||||||| ||||||||||||||    ||||| | ||| |||||||| |||||||| ||||||||||| ||  ||||||||| ||||    
T  39415485 ggggcaaaaagatggagtgcaaaatcgctca---aaaaaaaagggatgcaaaattgcacaattagcaaaagatagagggaaaaagtgcagttaa 39415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 39912158 - 39912057
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||||||| |||||||||| ||| || || ||||||||||||||   |||  ||||||  |||||||||||    
T  39912158 aaatcagaaagggggaaaactataggg-gcaaaatcgttcgtttaaaactat-ggatgtaaaatcgcacaattaataaactatagggaggaaaagtgcaa 39912061  T
Q  139 ttaa 142  Q
    ||||    
T  39912060 ttaa 39912057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 54508904 - 54508818
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||    ||||| |  |||||||||||| ||||||||||||||||| || |  ||||||||||||||    
T  54508904 aaaagatagggtgcaaaatcgctcaaa-aaaaagagagggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaa 54508818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 22681881 - 22681935
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||||||||| ||||||||  ||||||||||| | ||||||||||||||| ||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagccta 22681935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 27304893 - 27304943
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    ||||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  27304893 ggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 5206100 - 5206185
Alignment:
Q  56 aaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    |||||| ||||||||||||||||    ||||| | || |||||||||||||||||| || ||||||||||||  | ||||||||||    
T  5206100 aaagatagggtgcaaaatcgctcagaaaaaaagagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaatt 5206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 7603422 - 7603469
Alignment:
Q  94 gtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||  ||||||||||||  ||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagatagggg-aaaaagtgcaattaa 7603469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 11241637 - 11241673
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatc 74  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11241637 aaatcagaaagggggcaaaaagatggggtgcaaaatc 11241673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  93 ggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    ||||||||||||||||||| || |||||||| ||| |||||||||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 27304770 - 27304721
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| ||| |||||||||  |||||| ||||||||    
T  27304770 ggggtgcaaaatcgcacaattagcagaagataggg--gaaaagggcaattaa 27304721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 4e-63; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 7591337 - 7591203
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7591337 acatcatcgctaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 7591238  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaa 143  Q
    |||||||||||||||||||||||||| ||||||||    
T  7591237 attggcaaaagataggggtgaaaagtacaattaaa 7591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 2639399 - 2639538
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2639399 acatcatcgctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 2639498  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2639499 aattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 26842155 - 26842289
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26842155 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 26842254  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||||||| ||||    
T  26842255 aattggcaaaagataggggtgaaaagtgcacttaa 26842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 26841724 - 26841583
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26841724 acatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 26841625  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  26841624 aattggcaaaagataggggtgaaaagtgcaattaagcctaaa 26841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 2638958 - 2638823
Alignment:
Q  9 acatcatcactaaaacacatggggg--cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgca 106  Q
    ||||||||||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2638958 acatcatcactaaaatacgtgggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgca 2638859  T
Q  107 caattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||| |||||||||    
T  2638858 caattggcaaaagataggggtgaaaaatgcaattaa 2638823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 18296192 - 18296079
Alignment:
Q  29 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtg 128  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18296192 gggggcctccaaatcagaaaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 18296093  T
Q  129 aaaagtgcaattaa 142  Q
    |||||| |||||||    
T  18296092 aaaagtacaattaa 18296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 7591767 - 7591910
Alignment:
Q  9 acatcatcactaaaacacat-gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  7591767 acatcatcactaaaatacgtagggggcctccaaatcagaaagggggaaaaaaatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 7591866  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||| ||||||||||| ||||||  ||||||||| || |||||    
T  7591867 aattgacaaaagataggagtgaaagatgcaattaagccaaaaaa 7591910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 8851254 - 8851147
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  8851254 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 8851155  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  8851154 ttaaacct 8851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 26692768 - 26692874
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  26692768 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaa 26692867  T
Q  139 ttaaacc 145  Q
    |||||||    
T  26692868 ttaaacc 26692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 30191030 - 30190921
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  30191030 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 30190931  T
Q  138 attaaaccta 147  Q
    ||||| ||||    
T  30190930 attaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 24832432 - 24832321
Alignment:
Q  45 gaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaa 143  Q
    ||||||||| |||||||||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||     
T  24832432 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 24832333  T
Q  144 cctaaaaataaa 155  Q
    ||| ||||||||    
T  24832332 ccttaaaataaa 24832321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 7664354 - 7664246
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  7664354 aaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaa 7664255  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  7664254 ttaagccta 7664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 7664621 - 7664733
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||  |||||||||||    
T  7664621 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaa 7664720  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  7664721 ttaagccaaaaaa 7664733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 40469676 - 40469784
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| ||||||||||||||  |||||||||    
T  40469676 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgca 40469775  T
Q  138 attaaacct 146  Q
    |||||||||    
T  40469776 attaaacct 40469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 41790860 - 41790971
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| |||||||||||||||| |||  |||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  41790860 aaatcagaaagagggaaaactatagggggcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaa 41790959  T
Q  139 ttaaacctaaaa 150  Q
    |||| |||||||    
T  41790960 ttaagcctaaaa 41790971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 5378768 - 5378655
Alignment:
Q  38 caaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||||| ||| |||| || ||| |||||||||| ||||| ||| || |||||||||||||||||||||||||||  ||||||| ||||||||||    
T  5378768 caaatcagaaagagggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgca 5378669  T
Q  138 attaaacctaaaaa 151  Q
    ||||| ||||||||    
T  5378668 attaagcctaaaaa 5378655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18296639 - 18296707
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 76  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18296639 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 18296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 20347411 - 20347515
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||  ||||||||||||||||||||| |||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20347411 aaatcagaaaggggacaaaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 20347510  T
Q  138 attaa 142  Q
    |||||    
T  20347511 attaa 20347515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 32673090 - 32673197
Alignment:
Q  39 aaatcagaaaggggga-aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||| |||  ||||||||||||||||||||||||    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  32673090 aaatcagaaagagggcgaaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaagatagggg-aaaaagtgca 32673188  T
Q  138 attaaacct 146  Q
    |||||||||    
T  32673189 attaaacct 32673197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 8851531 - 8851633
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  8851531 aaatcagaaagggg-aaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 8851629  T
Q  139 ttaa 142  Q
    ||||    
T  8851630 ttaa 8851633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 16911217 - 16911319
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| | |||||||||    
T  16911217 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggcg-aaagtgcaa 16911315  T
Q  139 ttaa 142  Q
    ||||    
T  16911316 ttaa 16911319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 26692502 - 26692395
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  |||| ||  ||||||||||    
T  26692502 aaatcagaaaggggaaaaattatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaa 26692403  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  26692402 ttaaacct 26692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 37720282 - 37720207
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  37720282 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37720207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 38490758 - 38490891
Alignment:
Q  9 acatcatcactaaaacacatg-ggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||   ||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||||    
T  38490758 acatcatcactaaaagttatgaggggccttgaaatcataaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcac 38490857  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||| |||  ||| ||| | |||||||||||||    
T  38490858 aattggtaaactata-gggaggaaagtgcaattaa 38490891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 5379906 - 5380015
Alignment:
Q  38 caaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||||||||| |||| || ||| |||||||||| ||||| ||| || ||||||||||||||||||||||| |||  ||||||| ||||||||||    
T  5379906 caaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgca 5380005  T
Q  138 attaaaccta 147  Q
    ||||| ||||    
T  5380006 attaagccta 5380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 17851083 - 17850967
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| |||||||||||   || ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  17851083 aaatcataaagggggaaatctatagggggcaaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 17850985  T
Q  139 ttaaacctaaaaataaaa 156  Q
    |||| || ||||| ||||    
T  17850984 ttaagccaaaaaaaaaaa 17850967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 6171404 - 6171507
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||| ||||    ||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  6171404 aaatcagaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaaga-ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgca 6171502  T
Q  138 attaa 142  Q
    |||||    
T  6171503 attaa 6171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 6325036 - 6324924
Alignment:
Q  26 catgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    ||||||||||   ||||||||||| |||||||  || |||  ||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||    
T  6325036 catgggggccataaaatcagaaagagggaaaactataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggg 6324937  T
Q  126 gtgaaaagtgcaa 138  Q
    | |||||||||||    
T  6324936 gggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 5793553 - 5793446
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| |||||||||||||||||||| ||| || |||||||||||||||||||||||  | | ||| |||||||||||    
T  5793553 aaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaa 5793454  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  5793453 ttaaacct 5793446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 16910933 - 16910830
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || | | |||||||||||||||||||| ||||||||||||||||||||||||||||||  | | ||| |||||||||||    
T  16910933 aaatcagaaaggaggaaaactatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaa 16910834  T
Q  139 ttaa 142  Q
    ||||    
T  16910833 ttaa 16910830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 18296685 - 18296744
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18296685 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18296744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 19141797 - 19141901
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||  ||||||  | |||||||||    
T  19141797 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggg--ggaaagtgcaa 19141894  T
Q  139 ttaaacc 145  Q
    |||||||    
T  19141895 ttaaacc 19141901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 17851350 - 17851428
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 117  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  17851350 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaa 17851428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 6325298 - 6325398
Alignment:
Q  42 tcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatta 141  Q
    ||||||| ||||||||  || ||| |||||||||||||||||| | |||| |||||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  6325298 tcagaaatggggaaaactatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaatta 6325397  T
Q  142 a 142  Q
    |    
T  6325398 a 6325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 7979671 - 7979562
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||| ||  |||||||||||    
T  7979671 aaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactataagg--gaaaagtgcaa 7979574  T
Q  139 ttaaacctaaaa 150  Q
    | || |||||||    
T  7979573 taaagcctaaaa 7979562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 11883730 - 11883626
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||| |||||||| ||||||||| |||||||||| ||||    ||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11883730 aaatcataaagggggcaaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 11883631  T
Q  138 attaa 142  Q
    |||||    
T  11883630 attaa 11883626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 11883890 - 11883977
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||| ||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11883890 aaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 41790596 - 41790491
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || ||| |||||||||||||||| |||  |||||||||||||||||||||||| ||||  ||||||| ||||| |||||    
T  41790596 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaaatgcaa 41790498  T
Q  139 ttaaacc 145  Q
    |||||||    
T  41790497 ttaaacc 41790491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 26737728 - 26737841
Alignment:
Q  39 aaatcagaaagggggaaaaag-atggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||| |||||||| |||||| |||    |||||   |||||||||||||||||| || |||||||||||||||||||||||||    
T  26737728 aaatcagaaagggggcaaaaggatggggtgtaaaatctctcaaaaaaaaaagaggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgca 26737827  T
Q  138 attaaacctaaaaa 151  Q
    ||||| || |||||    
T  26737828 attaagccaaaaaa 26737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 18750102 - 18750176
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| || ||||||||||||    
T  18750102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gagaagtgcaattaa 18750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 19141547 - 19141447
Alignment:
Q  41 atcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatt 140  Q
    |||| ||||||||||||  || ||| | ||| |||||||||||||| ||||||||||||||| ||||||||||||||  |||||||  ||||||||||||    
T  19141547 atcataaagggggaaaactatagggggtaaattcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaatt 19141449  T
Q  141 aa 142  Q
    ||    
T  19141448 aa 19141447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 30191189 - 30191285
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||   |||||||||||| ||||||||||||||| || |||||    
T  30191189 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccaaaaaa 30191285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 7979951 - 7980053
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||  || ||||||||||||||||| |||||||||||||||||||||||| |||||  |||| ||  ||||||||||    
T  7979951 aaatcagaaaggggaaaaactataggcggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactatagagg-aaaaagtgcaa 7980049  T
Q  139 ttaa 142  Q
    ||||    
T  7980050 ttaa 7980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 40469517 - 40469416
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataa 154  Q
    ||||||| ||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||||| | ||||| | ||||||| || ||||| ||    
T  40469517 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagccaaaaaaaaa 40469418  T
Q  155 aa 156  Q
    ||    
T  40469417 aa 40469416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 15321486 - 15321386
Alignment:
Q  49 gggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    |||| |||||||||||||||||||||||||     |||||| ||| |||||||| ||||||||  ||||||||||||  |||||||||||||||  ||||    
T  15321486 ggggcaaaaagatggggtgcaaaatcgctcaaaataaaataggggatgcaaaattgcacaattaacaaaagataggg--gaaaagtgcaattaagtctaa 15321389  T
Q  149 aaa 151  Q
    |||    
T  15321388 aaa 15321386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 18055309 - 18055375
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    |||| |||||||||||||||||||||||| |||||| ||| ||  ||||||||||||||||| ||||    
T  18055309 aaaagatggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaaaccaaaaa 18055375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 15920867 - 15920779
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||||| ||||    ||||| | |||||||||||||||||||||  ||||||||||| | |||||||| ||||||||    
T  15920867 aaaagatggggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaaac 15920779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 15321565 - 15321513
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||| |||| ||||||||||||  ||||||||||||||||    
T  15321565 gggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaaac 15321513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 20347252 - 20347161
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  |||||||||| || |||||||| |||||| ||||    
T  20347252 aaaagatagggtgcaaaatcgctcaaaaaaaaaga-ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagccta 20347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 18055147 - 18055051
Alignment:
Q  43 cagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||  |||| ||||||||||||||||||     ||||| | ||||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  18055147 cagaaaggggacaaaaaatggggtgcaaaatcgctaaaa-aaaaagagggggtgcaaaatcgcacaattagcaaaag-tagggg-gaaaagtgcaattaa 18055051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 29230334 - 29230276
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||||||| |||||||| |||||||||| |  ||||||||||||||| ||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcctaaaaa 29230276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 32672932 - 32672831
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataa 154  Q
    ||||||| ||||||||||||||||    ||||| |  ||||||||||||||||||||  ||||||||| ||   |||||||||||||| || ||||||||    
T  32672932 aaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaagcc-aaaaataa 32672834  T
Q  155 aat 157  Q
    |||    
T  32672833 aat 32672831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 43495484 - 43495537
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  43495484 ggggtgcaaaatcgcacaattgacaaaaagatagggg-gaaaagtgcaattaaac 43495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 6171207 - 6171159
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 6171159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 6495723 - 6495772
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||  ||||||||||||  |||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaa 6495772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 17345822 - 17345733
Alignment:
Q  54 aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||||||| |||||||||||| |||     |||| | |||||||||||| ||| |||| |||||||||||||  ||||||||||||||||||    
T  17345822 aaaaagatagggtgcaaaatcactcaaaataaaagagggggtgcaaaattgcataattagcaaaagataggg--gaaaagtgcaattaaacc 17345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 26737534 - 26737485
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| ||||||||||  || |||||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagata--ggagaaaagtgcaattaa 26737485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 29343633 - 29343569
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaa-cctaaaaataaaa 156  Q
    ||||||||||| |||||||| |||||||||| |  |||||||||||||||| |||||||| ||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaaagcctaaaaaaaaaa 29343569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 18055221 - 18055167
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||||||||||||||  ||||||   ||||||||||||||||    
T  18055221 ggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 18055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 18749803 - 18749726
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    ||||||||  |||||||||| |||||||||||||||| || ||||| ||||  | ||| || |||||||||||||||||    
T  18749803 gcaaaatcattcgtttaaaactatggggtgcaaaatcacataattgacaaactagaggagt-aaaagtgcaattaaacc 18749726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  92 gggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    |||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 31641600 - 31641551
Alignment:
Q  27 atgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 76  Q
    |||||||||| |||| ||||||||||| ||| ||||| ||||||||||||    
T  31641600 atgggggccttcaaaccagaaaggggggaaaggatggagtgcaaaatcgc 31641551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 40221364 - 40221316
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||| |||||| |||||||||||||| |||| ||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagatagggg-gaaaggtgcaattaa 40221316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 15921032 - 15921083
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    |||| |||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  15921032 gggttcaaaatcgtacaattggcaaaagatacggg-gaaaggtgcaattaaac 15921083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaatt 140  Q
    ||||||||||||||||||| |||||| |||| ||| |||||||||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 43495356 - 43495312
Alignment:
Q  98 aaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||| |||||| ||||| | |||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaa 43495312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 6712 - 6846
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6712 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 6811  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||| |||||||||    
T  6812 aattggcaaaagataggggtgaaaaatgcaattaa 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 6288 - 6155
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6288 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaaatcgcaca 6189  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||| ||||||||||| ||||||||||||||||||    
T  6188 attagcaaaagatagaggtgaaaagtgcaattaa 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 11351346 - 11351483
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11351346 acatcattactaaaacacatgggggcctccaaatcataaagggggaaaa-gatggggtgtaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 11351444  T
Q  109 attggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11351445 attggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 18817528 - 18817662
Alignment:
Q  9 acatcatcactaaaacacatgggggc-ctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18817528 acatcatcgctaaaacacatggggggtctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 18817627  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||||||||||||||    
T  18817628 aattggcaaaagataggggtgaaaagtgcaattaa 18817662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 11350944 - 11350811
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11350944 acatcatcactaaaacacatggggggcctccaaatcaaaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcac 11350846  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||| |||||||||    
T  11350845 aattggcaaaagataggggtgaaaaatgcaattaa 11350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 18817089 - 18816947
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  18817089 acatcatcactaaaatacgtggggggcctccaaatcagaaagggggaaaaagatgggatgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 18816990  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  18816989 aattggcaaaagataggggtgaaaaatgcaattaagcctaaaa 18816947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 39 - 152
Target Start/End: Complemental strand, 12498673 - 12498560
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  12498673 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 12498574  T
Q  139 ttaaacctaaaaat 152  Q
    |||| |||||||||    
T  12498573 ttaagcctaaaaat 12498560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 21207332 - 21207226
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  21207332 aaatcagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 21207233  T
Q  139 ttaaacc 145  Q
    |||||||    
T  21207232 ttaaacc 21207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 12498876 - 12498985
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  12498876 aaatcagaaagggggaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 12498975  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  12498976 ttaagcctaa 12498985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 26571112 - 26571221
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  26571112 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 26571211  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  26571212 ttaagcctaa 26571221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 18433122 - 18433018
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18433122 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 18433023  T
Q  138 attaa 142  Q
    |||||    
T  18433022 attaa 18433018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 22729388 - 22729490
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  22729388 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattatagggg-gaaaagtgcaa 22729486  T
Q  139 ttaa 142  Q
    ||||    
T  22729487 ttaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 25115864 - 25115755
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  25115864 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgca 25115765  T
Q  138 attaaaccta 147  Q
    ||||| ||||    
T  25115764 attaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 25174956 - 25174847
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  25174956 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgca 25174857  T
Q  138 attaaaccta 147  Q
    ||||| ||||    
T  25174856 attaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 43464140 - 43464251
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||  ||||||| |||||||||||    
T  43464140 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 43464238  T
Q  139 ttaaacctaaaaa 151  Q
    |||| ||||||||    
T  43464239 ttaagcctaaaaa 43464251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 2817254 - 2817148
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||| || ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||  |||||||||||    
T  2817254 aaatcagaaagggg-aaaaatatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaa 2817156  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  2817155 ttaaacct 2817148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 3888345 - 3888242
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||| |||| ||||||    
T  3888345 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaa 3888246  T
Q  139 ttaa 142  Q
    ||||    
T  3888245 ttaa 3888242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 3888610 - 3888717
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||| | | |||||||||||    
T  3888610 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaa 3888709  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  3888710 ttaaacct 3888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 43463861 - 43463755
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||| |||||||||||    
T  43463861 aaatcagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataaggg-gaaaagtgcaa 43463763  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  43463762 ttaaacct 43463755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 26020557 - 26020440
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||||||| |||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  26020557 aaatcagaaagggggcaaaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgca 26020458  T
Q  138 attaaacctaaaaataaa 155  Q
    ||||| ||| || |||||    
T  26020457 attaagccttaatataaa 26020440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 26570835 - 26570726
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || |||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||| ||    
T  26570835 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaa 26570736  T
Q  139 ttaaacctaa 148  Q
    |||| |||||    
T  26570735 ttaagcctaa 26570726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 19514632 - 19514528
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagata-ggggtgaaaagtgca 137  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||| | ||||||||    
T  19514632 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgca 19514533  T
Q  138 attaa 142  Q
    |||||    
T  19514532 attaa 19514528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 19514911 - 19515014
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||  ||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  19514911 aaatcagaaagggggaaaactatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 19515010  T
Q  139 ttaa 142  Q
    ||||    
T  19515011 ttaa 19515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 31569983 - 31569905
Alignment:
Q  68 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31569983 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagggg-gaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 34147458 - 34147561
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| || | |||||||||||||||||||| ||||  |||||||  ||||||||||    
T  34147458 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaa 34147557  T
Q  139 ttaa 142  Q
    ||||    
T  34147558 ttaa 34147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 34576972 - 34576867
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| |||||||| |||||||||||||| |||||||||||||| | ||||||||    
T  34576972 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgtaaaatcgcacaattagcaaaagatagggg-ggaaagtgca 34576875  T
Q  138 attaaacc 145  Q
    ||||||||    
T  34576874 attaaacc 34576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 42919410 - 42919323
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggg 126  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||    
T  42919410 aaatcagaaaggggaaaaatgatagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatatagggg 42919323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 10098889 - 10098996
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || |||   |||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||| | |||||||||||    
T  10098889 aaatcagaaagagggaaaactataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggag-gaaaagtgcaa 10098987  T
Q  139 ttaaaccta 147  Q
    |||||||||    
T  10098988 ttaaaccta 10098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 41072162 - 41072273
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||| ||||||||||||||  || ||| |||||||||||||||||||| ||| ||||||||||||| ||||||| ||||  ||||| | |||||||| ||    
T  41072162 aaattagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactataggag-gaaaagtgtaa 41072260  T
Q  139 ttaaacctaaaaa 151  Q
    |||||||||||||    
T  41072261 ttaaacctaaaaa 41072273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 11316922 - 11317029
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||||||||  | || ||  ||||||||||    
T  11316922 aaatcagaaagagggaaaactatagggggcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaa 11317021  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  11317022 ttaaacct 11317029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 25175115 - 25175210
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||    
T  25175115 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaaaa 25175210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 25940627 - 25940524
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||  |||||||  |||| |||||    
T  25940627 aaatcagaaagggtgaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaa 25940528  T
Q  139 ttaa 142  Q
    ||||    
T  25940527 ttaa 25940524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 37610279 - 37610205
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||| |||||||||||||||    
T  37610279 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggg-gaaaagtgcaattaa 37610205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 37780397 - 37780323
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||| |||||||||||||||    
T  37780397 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggg-gaaaagtgcaattaa 37780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 16466708 - 16466812
Alignment:
Q  54 aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaata 153  Q
    |||||||||||||||||||||||||    ||||| |   | ||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||    
T  16466708 aaaaagatggggtgcaaaatcgctca---aaaaaaagttgatgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcctaaaaata 16466804  T
Q  154 aaatggaa 161  Q
    ||| ||||    
T  16466805 aaaaggaa 16466812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 34147245 - 34147172
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattg 112  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  34147245 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattg 34147172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 18433281 - 18433367
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  18433281 aaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18433367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 22429021 - 22428930
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||||||||||||||||| ||||    ||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||||| ||||||    
T  22429021 aaaagatggggtgcaaaattgctcaa--aaaaagatggggtgcaaaatcgcacaattagcaaaagatagggg-ggaaagtgcaattaagcctaaa 22428930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 22729112 - 22729011
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||  ||||||||||||||||||  ||||  ||||||| |||||||||||    
T  22729112 aaatcagaaagggggaaaactataggg-gcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactatagggg-gaaaagtgcaa 22729015  T
Q  139 ttaa 142  Q
    ||||    
T  22729014 ttaa 22729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 37780718 - 37780806
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataaaa 156  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||  ||||||| ||||||| ||||||| || ||||||||||    
T  37780718 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc-aaaaataaaa 37780806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 25940961 - 25941065
Alignment:
Q  39 aaatcagaaagggggaaaaag-atggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||  || ||| |||||||||||||||||||| |||||| |||||||||||| ||||  ||||  ||||| | ||||||||||    
T  25940961 aaatcagaaaggggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgca 25941060  T
Q  138 attaa 142  Q
    |||||    
T  25941061 attaa 25941065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 25116061 - 25116120
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaaaa 25116120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 34577129 - 34577214
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    ||||| ||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||    
T  34577129 aaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgcaaaatcacacaattagcaaaagatagggg-aaaaagtgcaattaa 34577214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 11316812 - 11316714
Alignment:
Q  47 aagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||||||||||  || ||| ||||||| |||||||||||| ||| || |||||||| | ||||||||||||  ||||| | ||||||||||||||||||    
T  11316812 aagggggaaaactatagggggcaaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaaacc 11316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 22429188 - 22429252
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||    
T  22429188 aaaaagatggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaaatgcaattaagcctaa 22429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 30401977 - 30401876
Alignment:
Q  50 ggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||||||  || ||| ||||||||||| |||||||| |||||| |||||||| | ||||||||||||  |||| |  |||||||||||||||||| |||    
T  30401977 ggggaaaattatagggggcaaaatcgctagtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaaaccaaaa 30401878  T
Q  150 aa 151  Q
    ||    
T  30401877 aa 30401876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 37610567 - 37610681
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||   || ||| ||||||||||||||||||||  ||| ||||||||||||||||||| |||||  ||||||| | ||||| |||    
T  37610567 aaatcagaaagggggaaact-atagggggcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactatagggg-ggaaagtacaa 37610664  T
Q  139 ttaaacctaaaaataaaa 156  Q
    |||| || ||||||||||    
T  37610665 ttaagcc-aaaaataaaa 37610681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 2817551 - 2817625
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||| || || |||||||||||||| |||||  ||||||| |||||||||||||||    
T  2817551 gcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactatagggg-gaaaagtgcaattaa 2817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 10098597 - 10098522
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||| || |||||||||||||||||| ||||  ||||| |  ||||||||||||||    
T  10098597 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 10098522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 9665617 - 9665558
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||| |||||||||||||| |||||||| |||||||||||||  |||||||||||||||||    
T  9665617 aaaaagatggggtgcaaaattgcacaattagcaaaagataggg--gaaaagtgcaattaaac 9665558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaat 139  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 5187805 - 5187890
Alignment:
Q  66 tgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||||||    ||||||| |||||||||||| ||||||||  ||||||||| |||  |||||||||||||| ||||||||    
T  5187805 tgcaaaatcgctcaaaaaaaaatagggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcctaaaaa 5187890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 9665792 - 9665888
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataa 154  Q
    ||||||||||||||||||||||||    |||||||  ||||||||||| |||||||| |||||||||||||| |||||||| |||||| || ||||||||    
T  9665792 aaaagatggggtgcaaaatcgctcaaa-aaaaatagtgggtgcaaaat-gcacaattagcaaaagatagggg-gaaaagtggaattaagcc-aaaaataa 9665887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 33324838 - 33324894
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||| |||||||| |||||||||||||  |||||||||||||| ||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 41382945 - 41382890
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaaacctaa 41382890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 41383117 - 41383217
Alignment:
Q  38 caaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgc 136  Q
    ||||| |||||||||  ||||||||||| ||||||||||||     ||||| | ||||||||||||||||||||| |||||| ||||||| ||||||| |    
T  41383117 caaatgagaaaggggacaaaaagatgggatgcaaaatcgcta----aaaaaaaaggggtgcaaaatcgcacaattagcaaaaaatagggg-gaaaagttc 41383211  T
Q  137 aattaa 142  Q
    ||||||    
T  41383212 aattaa 41383217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 9869611 - 9869559
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacct 146  Q
    |||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  9869611 gggtgcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaaacct 9869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 23011131 - 23011073
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||||||||||||| |||||||||| ||| ||||| ||||||||| || |||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggg-gaaaaatgcaattaagccaaaaaa 23011073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 9869738 - 9869792
Alignment:
Q  91 ggggtgcaaaatcgcacaattgg-caaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||||||  |||||| |||||  ||||||||||||||||    
T  9869738 ggggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaaac 9869792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 22429172 - 22429210
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgc 76  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22429172 aaatcagaaagggggcaaaaagatggggtgcaaaatcgc 22429210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 23011261 - 23011311
Alignment:
Q  95 tgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaaac 23011311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 12441196 - 12441244
Alignment:
Q  97 caaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||| ||||| ||||||||  ||||||||||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaac 12441244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 12441320 - 12441361
Alignment:
Q  99 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||| |||||||||||||  |||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagataggg--gaaaagtgcaattaa 12441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 23011383 - 23011434
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||||||  ||||||||| |||  ||||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagataaggg-aaaaagtgcaattaaac 23011434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 3e-55; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 49284525 - 49284412
Alignment:
Q  29 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49284525 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 49284426  T
Q  129 aaaagtgcaattaa 142  Q
    ||||||||||||||    
T  49284425 aaaagtgcaattaa 49284412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 6002374 - 6002226
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  6002374 acatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacac 6002275  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaaaaataaaa 156  Q
    ||||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  6002274 aattgacaaaagataggggtgaaaagtgcaattaagccaaaaaaaaaaa 6002226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 6002810 - 6002945
Alignment:
Q  9 acatcatcactaaaacacatgggg--gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgca 106  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6002810 acatcatcactaaaacacatgggggggcctccaaatcagaaagggggaaaaagatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgca 6002909  T
Q  107 caattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||  ||||||||||| ||||||||||||||||    
T  6002910 caattgcgaaaagatagggatgaaaagtgcaattaa 6002945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 49284972 - 49285086
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  49284972 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcac 49285071  T
Q  108 aattggcaaaagata 122  Q
    |||||||||||||||    
T  49285072 aattggcaaaagata 49285086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 39691948 - 39692051
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  39691948 aaatcagaaagggggaaaaagatagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaa 39692047  T
Q  139 ttaa 142  Q
    ||||    
T  39692048 ttaa 39692051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 46823949 - 46823833
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||| |||||||||||    
T  46823949 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 46823850  T
Q  139 ttaaacctaaaaataaa 155  Q
    |||||||  ||||||||    
T  46823849 ttaaaccataaaataaa 46823833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 9347232 - 9347129
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  9347232 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 9347133  T
Q  139 ttaa 142  Q
    ||||    
T  9347132 ttaa 9347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 48104784 - 48104677
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  48104784 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaa 48104685  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  48104684 ttaaacct 48104677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 50430029 - 50430135
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  50430029 aaatcagaaagggagaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 50430128  T
Q  139 ttaaacc 145  Q
    |||||||    
T  50430129 ttaaacc 50430135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 47955413 - 47955300
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  47955413 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 47955314  T
Q  138 attaaacctaaaaa 151  Q
    ||||| ||| ||||    
T  47955313 attaagccttaaaa 47955300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 27172221 - 27172110
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  27172221 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaa 27172123  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  27172122 ttaagccaaaaaa 27172110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 28634105 - 28634213
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  28634105 aaatcagaaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 28634204  T
Q  139 ttaaaccta 147  Q
    |||||||||    
T  28634205 ttaaaccta 28634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 32162991 - 32163099
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  ||  || |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  32162991 aaatcagaaagggggaaaactataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 32163090  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  32163091 ttaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 48105064 - 48105167
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||| |||||||||||    
T  48105064 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaa 48105163  T
Q  139 ttaa 142  Q
    ||||    
T  48105164 ttaa 48105167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 50526420 - 50526523
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||  ||||||||||    
T  50526420 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaa 50526519  T
Q  139 ttaa 142  Q
    ||||    
T  50526520 ttaa 50526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 44911131 - 44911021
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  44911131 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaa 44911032  T
Q  139 ttaaacctaaa 149  Q
    |||| ||||||    
T  44911031 ttaagcctaaa 44911021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 13918552 - 13918440
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |  ||||||||||    
T  13918552 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaa 13918453  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  13918452 ttaagccaaaaaa 13918440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 26815067 - 26815175
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||||||||||||||||||||||||  |||  ||||||| |||||||||||    
T  26815067 aaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaa 26815166  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  26815167 ttaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 28633826 - 28633718
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||| ||| |||||||||||    
T  28633826 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaa 28633727  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  28633726 ttaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 20480273 - 20480171
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  20480273 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 20480175  T
Q  139 ttaa 142  Q
    ||||    
T  20480174 ttaa 20480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 26814800 - 26814697
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||  |||||||||||    
T  26814800 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaa 26814701  T
Q  139 ttaa 142  Q
    ||||    
T  26814700 ttaa 26814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 42611291 - 42611184
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||  |||||||||||||||||||| |||| |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  42611291 aaatcagaaagggggaaaactataggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaa 42611192  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  42611191 ttaaacct 42611184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 999473 - 999580
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| |||||| ||||||||||||||||||||||   ||||||| |||||||||||    
T  999473 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctatagggg-gaaaagtgcaa 999571  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  999572 ttaagccta 999580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 9347499 - 9347606
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||| | |||||||||    
T  9347499 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggg-ggaaagtgcaa 9347597  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  9347598 ttaagccta 9347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 22149649 - 22149754
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||||||||||||||||||||||     ||||| | | ||||||||||||||||||| |||||||||||||| |||||||||||    
T  22149649 aaatcagaaaggggcaaaaagatggggtgcaaaatcgctaaa--aaaaaaaggaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaa 22149746  T
Q  139 ttaaacct 146  Q
    ||||||||    
T  22149747 ttaaacct 22149754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 6703842 - 6703945
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  ||  |  |||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  6703842 aaatcagaaagggggaaaactatatgaggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaa 6703941  T
Q  139 ttaa 142  Q
    ||||    
T  6703942 ttaa 6703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 50615569 - 50615671
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  50615569 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 50615667  T
Q  139 ttaa 142  Q
    ||||    
T  50615668 ttaa 50615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 50623397 - 50623499
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  50623397 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 50623495  T
Q  139 ttaa 142  Q
    ||||    
T  50623496 ttaa 50623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 42611562 - 42611668
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| ||||||||||| |||||||| |||| |||||||||||||||||||| ||||  ||||||| |||||||||||    
T  42611562 aaatcagaaaggggaaaaactatagggggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaa 42611661  T
Q  139 ttaaacc 145  Q
    |||||||    
T  42611662 ttaaacc 42611668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 19008697 - 19008810
Alignment:
Q  38 caaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||||||||  || ||| ||||||| || ||||| ||| |||||||||||||||||||||||||  |||  ||||||| ||||||||||    
T  19008697 caaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgca 19008796  T
Q  138 attaaacctaaaaa 151  Q
    ||||| ||||||||    
T  19008797 attaagcctaaaaa 19008810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 48190833 - 48190765
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  48190833 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaaa 48190765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 6703566 - 6703455
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||| ||||||||  || ||| |||||||||||||||||||| |||| ||||||||||||||||||||| |||  ||||| |  ||||||||||    
T  6703566 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaa 6703467  T
Q  139 ttaaacctaaaa 150  Q
    |||| |||||||    
T  6703466 ttaagcctaaaa 6703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 21687131 - 21687028
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || ||| |||||||||||||||||||| |||||||||||||||  |||||||| ||||  ||||||| |||||||||||    
T  21687131 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaa 21687032  T
Q  139 ttaa 142  Q
    ||||    
T  21687031 ttaa 21687028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 27172490 - 27172592
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  | ||||| |||||||||||    
T  27172490 aaatcagaaagggggaaaactataggg-gcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaa 27172588  T
Q  139 ttaa 142  Q
    ||||    
T  27172589 ttaa 27172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 46824226 - 46824329
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| ||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||| |  ||||||||||    
T  46824226 aaatcaaaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaa 46824325  T
Q  139 ttaa 142  Q
    ||||    
T  46824326 ttaa 46824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 49317857 - 49317755
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| | |||||||||||||||||| |||||| |||||||| ||||||||||||||  ||||||| |||||||||||    
T  49317857 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaa 49317759  T
Q  139 ttaa 142  Q
    ||||    
T  49317758 ttaa 49317755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 49318114 - 49318216
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||  ||||||| | |||||||||    
T  49318114 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactatagggg-ggaaagtgcaa 49318212  T
Q  139 ttaa 142  Q
    ||||    
T  49318213 ttaa 49318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 999189 - 999106
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||||||| ||||    
T  999189 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaaaccttaaaa 999106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 20371300 - 20371403
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatat-ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||  || ||| ||||||| |||||||||||| ||| |||||||||||||||||||||||||||  ||||||| ||||||||||    
T  20371300 aaatcagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgca 20371398  T
Q  138 attaa 142  Q
    |||||    
T  20371399 attaa 20371403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 44911385 - 44911493
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| ||||||  || ||| |||||||||||||||| |||  || ||||||||||||||||||||||||||  |||||||  |||| |||||    
T  44911385 aaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaa 44911484  T
Q  139 ttaaaccta 147  Q
    |||||||||    
T  44911485 ttaaaccta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 48191302 - 48191369
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 76  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  48191302 acatcatcactaaaacacatggggggcctccaaatcagaaaggggg-aaaagatggggtgcaaaatcgc 48191369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 4692381 - 4692484
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||  | |||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||  ||||||||||    
T  4692381 aaatcagaaaggggaaaaactataggaggtaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaa 4692480  T
Q  139 ttaa 142  Q
    ||||    
T  4692481 ttaa 4692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 8108985 - 8109044
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8108985 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 8109044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 13918815 - 13918918
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| || |||||||||  || ||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||  ||||||  |||||||||||    
T  13918815 aaatcaaaaggggggaaaactatagggggcaaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaa 13918914  T
Q  139 ttaa 142  Q
    ||||    
T  13918915 ttaa 13918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 48191348 - 48191411
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  48191348 aaaagatggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 31848002 - 31847894
Alignment:
Q  38 caaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgc 136  Q
    |||| ||||||||||| |||||||| ||||||||||||||||    ||||||||||| |||||||| |||||||| |||||||||| ||| | |||||||    
T  31848002 caaaccagaaagggggcaaaaagatcgggtgcaaaatcgctc-aaaaaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtgc 31847904  T
Q  137 aattaaacct 146  Q
    ||||||||||    
T  31847903 aattaaacct 31847894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 31848158 - 31848248
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||||||||||||||||||||||||   ||||| | |||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||    
T  31848158 aaaagatggggtgcaaaatcgctcga--aaaaagagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagccta 31848248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 17518551 - 17518652
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||||||||| |||||||| ||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  17518551 aaatcagaaagggggcaaaaagatggg-tgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagatagggg-gaaaagtgca 17518647  T
Q  138 attaa 142  Q
    |||||    
T  17518648 attaa 17518652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 20480591 - 20480662
Alignment:
Q  70 aaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 20480662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 41083015 - 41082912
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||| | ||| ||||||||||||||||||||||||||||||||  |||||| ||    
T  41083015 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaa-aaaaagaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtaca 41082917  T
Q  138 attaa 142  Q
    |||||    
T  41082916 attaa 41082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 48190879 - 48190811
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 76  Q
    |||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  48190879 acatcatcactaaaattcatggggggcctccaaattagaaagggggaaaaagatggggtgcaaaatcgc 48190811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 8108810 - 8108719
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  8108810 aaaagatagggtgcaaaatcgctcaaaaaaaaa-agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaaccta 8108719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 33085775 - 33085674
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||| |||||| |||| |||||||||||| ||||||  ||| |||||||||||||||  ||||||| ||||| ||||||  ||||||| |||    
T  33085775 aaatcagaaaggaggaaaaggatgaggtgcaaaatcgttcgttt--aaacatggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaa 33085678  T
Q  139 ttaa 142  Q
    ||||    
T  33085677 ttaa 33085674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 47955572 - 47955664
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||   |||||||||||| ||||||||||||||| ||||    
T  47955572 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 1176932 - 1176837
Alignment:
Q  50 ggggaaaaagatggggtgcaaaatcgct-cgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaac 144  Q
    |||| ||||||||||||||||||||||| |    ||||| | |||||||||||| ||||||||| |||||||||||||  ||||||||||||||||    
T  1176932 ggggcaaaagatggggtgcaaaatcgctacaaaaaaaaagagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaaac 1176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 21687415 - 21687517
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  |  | | | |||||||||||||||||| |||| ||| |||||||||||||||||||||  ||||||| ||||||||| |    
T  21687415 aaatcagaaagggggaaaactacagagggaaaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagggg-gaaaagtgcta 21687513  T
Q  139 ttaa 142  Q
    ||||    
T  21687514 ttaa 21687517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 50429762 - 50429659
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||  |||||  || ||| |||||||||||||||||||| |||| ||||||||||||||||||| |||||  |||  || ||||||| |||    
T  50429762 aaatcagaaaggatgaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaa 50429663  T
Q  139 ttaa 142  Q
    ||||    
T  50429662 ttaa 50429659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 50949513 - 50949615
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||| |||  ||| | |||||||||||||||||| ||||  ||||||| | |||||||||    
T  50949513 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaa 50949612  T
Q  139 tta 141  Q
    |||    
T  50949613 tta 50949615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 20371116 - 20371043
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||||  ||||||  | |||||||||||||    
T  20371116 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggg--ggaaagtgcaattaa 20371043  T

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Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 49318421 - 49318504
Alignment:
Q  69 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaata 153  Q
    |||||||||||||||||| |||||| ||||||||||||||||||  |||  ||||||| ||||| ||||||||| || |||||||    
T  49318421 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagggg-gaaaaatgcaattaagccaaaaaata 49318504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 13589659 - 13589709
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaa 13589709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 17518392 - 17518298
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||| ||| |||| |||||||||| |||||||    
T  17518392 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataaggg-gaaaggtgcaattaagcctaaaa 17518298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 44224067 - 44224141
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattgg 113  Q
    |||||||||||||| ||||  || |||  ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  44224067 aaatcagaaaggggtaaaactataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcacacaattgg 44224141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 50949237 - 50949155
Alignment:
Q  69 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||| |  ||||| | ||||||| |||||||||| |||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaaaccaaaaaa 50949155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 47498377 - 47498295
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||||||||||  ||||||  | ||||||||||||| || |||||    
T  47498377 gcaaaatcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaactataggg--ggaaagtgcaattaagccaaaaaa 47498295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 1177018 - 1177074
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||||||||||| |||||||| || ||||||||||  ||||||||||||||||||||    
T  1177018 ggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaaccta 1177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 24671360 - 24671283
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaa 118  Q
    |||||| |||||||| |||| |  ||||||||||||||||  ||||||  |||| |||||||||||||||||||||||||    
T  24671360 aaatcaaaaagggggtaaaaaa--gggtgcaaaatcgctcaattaaaaggatggagtgcaaaatcgcacaattggcaaaa 24671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 32162799 - 32162757
Alignment:
Q  75 gctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 117  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  32162799 gctcgtttaaaactatggggtgcaaaattgcacaattggcaaa 32162757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 39690847 - 39690791
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||||||||||||||||||||| ||| |||||||  |||||||||| ||| |||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagcctaa 39690791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 41083211 - 41083266
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||| |  ||||||||||||| ||||||||||||||| ||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagatagggg-gaaaagtgcaattaagccta 41083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 31848067 - 31848017
Alignment:
Q  95 tgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaaac 31848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 50615289 - 50615243
Alignment:
Q  96 gcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 50623117 - 50623071
Alignment:
Q  96 gcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 47498493 - 47498545
Alignment:
Q  89 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||| |||||||||| ||||  ||||||| |||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactatagggg-gaaaagtgcaattaa 47498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 22149580 - 22149632
Alignment:
Q  93 ggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||||| || |||||||| |||  ||||||||||||||||    
T  22149580 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaac 22149632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 1928351 - 1928490
Alignment:
Q  9 acatcatcactaaaacacatgggggcc-tccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcac 107  Q
    ||||||||||||||||| ||||||||| | |||| |||||| |||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  1928351 acatcatcactaaaacatatgggggcccttcaaaccagaaaaggggaaaaggatagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcac 1928450  T
Q  108 aattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||||||||||||||||  ||||| |||||||||||||||    
T  1928451 aattggcaaaagatagggaggaaaa-tgcaattaaacctaa 1928490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 48160003 - 48159895
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  48160003 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 48159904  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  48159903 ttaagccta 48159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 8314119 - 8314016
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||| || ||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  8314119 aaatcagaaagggggaaaatgatagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaa 8314020  T
Q  139 ttaa 142  Q
    ||||    
T  8314019 ttaa 8314016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 27238848 - 27238959
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  27238848 aaatcagaaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaa 27238947  T
Q  139 ttaaacctaaaa 150  Q
    ||||||| ||||    
T  27238948 ttaaaccaaaaa 27238959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 40848626 - 40848509
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||  ||||||| |||||||||||    
T  40848626 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactatagggg-gaaaagtgcaa 40848528  T
Q  139 ttaaacc-taaaaataaaa 156  Q
    |||| || |||||||||||    
T  40848527 ttaagccttaaaaataaaa 40848509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 20968967 - 20969070
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20968967 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaa-ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 20969065  T
Q  138 attaa 142  Q
    |||||    
T  20969066 attaa 20969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 48160281 - 48160393
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| | |||||||||    
T  48160281 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaa 48160380  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  48160381 ttaagccaaaaaa 48160393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 22429264 - 22429161
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || |||  ||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  22429264 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaa 22429165  T
Q  139 ttaa 142  Q
    ||||    
T  22429164 ttaa 22429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 26007567 - 26007678
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||  ||||||||||| ||||||||||||  |||||||  ||||||||||    
T  26007567 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaa 26007666  T
Q  139 ttaaacctaaaa 150  Q
    ||||||||||||    
T  26007667 ttaaacctaaaa 26007678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 27238571 - 27238460
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||| | ||||||| |||    
T  27238571 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaa 27238472  T
Q  139 ttaaacctaaaa 150  Q
    |||| |||||||    
T  27238471 ttaagcctaaaa 27238460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 42673244 - 42673346
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  42673244 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 42673342  T
Q  139 ttaa 142  Q
    ||||    
T  42673343 ttaa 42673346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 53687994 - 53687891
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  53687994 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 53687895  T
Q  139 ttaa 142  Q
    ||||    
T  53687894 ttaa 53687891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 40848909 - 40849017
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  40848909 aaatcagaaagggtgaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaa 40849008  T
Q  139 ttaaaccta 147  Q
    |||| ||||    
T  40849009 ttaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 42673096 - 42672981
Alignment:
Q  26 catgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggg 125  Q
    ||||||||||   |||||| ||||||||||||  || ||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  42673096 catgggggccataaaatcataaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggg 42672997  T
Q  126 gtgaaaagtgcaattaa 142  Q
    | |||||||||||||||    
T  42672996 g-gaaaagtgcaattaa 42672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 47666283 - 47666386
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| |||  |||||||||||||| ||||||||||||||  ||||||| |||||||||||    
T  47666283 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaa 47666382  T
Q  139 ttaa 142  Q
    ||||    
T  47666383 ttaa 47666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 53688251 - 53688367
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||||  ||||||| | |||||||||    
T  53688251 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactataggggag-aaagtgcaa 53688349  T
Q  139 ttaaacctaaaaataaaa 156  Q
    |||| || |||| |||||    
T  53688350 ttaagccaaaaactaaaa 53688367  T

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Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 3353500 - 3353606
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||||||||   || ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||| |||||||||||    
T  3353500 aaatcagaaagggggaaact-atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaa 3353597  T
Q  139 ttaaaccta 147  Q
     ||||||||    
T  3353598 ctaaaccta 3353606  T

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Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 10293715 - 10293611
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||| |||||||||||||  |||| ||||    
T  10293715 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgca 10293616  T
Q  138 attaa 142  Q
    |||||    
T  10293615 attaa 10293611  T

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Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 10348747 - 10348859
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||| ||||||||||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| | |  ||||||||||    
T  10348747 aaattagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaa 10348846  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  10348847 ttaagccaaaaaa 10348859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 3353231 - 3353131
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| |  ||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |||||||||||    
T  3353231 aaatcagaaagggggaaaactataggggg--aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaa 3353135  T
Q  139 ttaa 142  Q
    ||||    
T  3353134 ttaa 3353131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 24485408 - 24485519
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||| |||||||||||| |  || ||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||| ||| |||||||||||    
T  24485408 aaattagaaagggggaatactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggagaaaagtgcaa 24485506  T
Q  139 ttaaacctaaaaa 151  Q
    |||| || |||||    
T  24485507 ttaagccaaaaaa 24485519  T

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Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 47871073 - 47871172
Alignment:
Q  43 cagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatat-ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatta 141  Q
    |||||| |||||||||||||||||||||||||||||    |||||  | ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  47871073 cagaaaaggggaaaaagatggggtgcaaaatcgctcaaaaaaaaaagtgggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaatta 47871171  T

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Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 9026839 - 9026734
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||| | |||||||||||| ||||||||  ||||||||||| | ||||| ||||    
T  9026839 aaatcagaaagggggaaaaagatggggtgcaaaatcgctc---aaaaaataaaggggtgcaaaattgcacaattaacaaaagataggag-gaaaaatgca 9026744  T
Q  138 attaaaccta 147  Q
    ||||||||||    
T  9026743 attaaaccta 9026734  T

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Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 21896459 - 21896546
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggg 126  Q
    |||||| ||| ||| |||| |||||||||||||||||||||| |||||  |||||||||||||||||||||||| ||||| |||||||    
T  21896459 aaatcaaaaatgggaaaaatgatggggtgcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatatagggg 21896546  T

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Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 22429544 - 22429646
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||| | | |||||||||    
T  22429544 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggag-ggaaagtgcaa 22429642  T
Q  139 ttaa 142  Q
    ||||    
T  22429643 ttaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 24485127 - 24485049
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 117  Q
    |||||||||||||| ||||  || ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24485127 aaatcagaaaggggaaaaactatagggggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 24485049  T

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Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 53766241 - 53766163
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||| |  |||||||||||||||||    
T  53766241 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaacc 53766163  T

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Target: chr3; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 18875155 - 18875251
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||||||||||||||||||||    ||||| | |||||||||||||| |||||| ||||||||||||||  |||||||||||||| || |||||    
T  18875155 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcccaaaaa 18875251  T

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Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 36180660 - 36180559
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || |||  ||||||||||||||||||| |||||| |||||||||||||||||| ||||  ||||||  |||| ||||||    
T  36180660 aaatcagaaagggggaaaactataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggg--gaaatgtgcaa 36180563  T
Q  139 ttaa 142  Q
    ||||    
T  36180562 ttaa 36180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 26007287 - 26007185
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||  ||||||  || | | |||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| ||||| |||||    
T  26007287 aaatcagaaagatggaaaactatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaa 26007189  T
Q  139 ttaa 142  Q
    ||||    
T  26007188 ttaa 26007185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 28702410 - 28702299
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 108  Q
    |||||||||| |||| |||| ||||||| |||||||||||||||  ||| ||| | |||||||||| |||  |||||||||||| ||||||||||||| |    
T  28702410 acatcatcaccaaaa-acataggggccttcaaatcagaaagggg--aaaggattgtgtgcaaaatcactcaattaaaaatatggagtgcaaaatcgcata 28702314  T
Q  109 attggcaaaagatag 123  Q
    |||| ||||||||||    
T  28702313 attgacaaaagatag 28702299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 14015957 - 14016022
Alignment:
Q  84 aaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    |||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||    
T  14015957 aaaagatggggtgcaaaatcgcacaattagcaaaagata-ggatgaaaagtgcaattaaacctaaaa 14016022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 42456144 - 42456217
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattgg 113  Q
    ||||||||||||||||||   || ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  42456144 aaatcagaaagggggaaact-atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 42456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 10771629 - 10771499
Alignment:
Q  17 actaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaa 116  Q
    |||||||||||||||||||| |||| |||||||||  |||| ||| || || ||||||||||| ||||||| |||| ||  ||||||||||||||| |||    
T  10771629 actaaaacacatgggggccttcaaaccagaaaggga-aaaatgatagg-tgtaaaatcgctcggttaaaaacatggagtaaaaaatcgcacaattgacaa 10771532  T
Q  117 aagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    |||||| |||  |||| ||||||||| |||||||    
T  10771531 aagata-gggaaaaaaatgcaattaagcctaaaa 10771499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 4947362 - 4947263
Alignment:
Q  44 agaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatgg--ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatta 141  Q
    ||||||| | |||||||||||||||||||| |||||   |||||||  |  |||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  4947362 agaaaggagcaaaaagatggggtgcaaaattgctcgaaaaaaaatagagagggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 10293873 - 10293969
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||||| ||||||||||||||||     |||| | |||||||||||||||||||||  ||||||||||||| ||||||||||||||| || |||||    
T  10293873 aaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaaaaa 10293969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 45060863 - 45060927
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  45060863 aaaaagatagggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagccta 45060927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 1927878 - 1927812
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 76  Q
    ||||||||||||||| |||||||||||| |||| |||||| |||||||||||| ||||||||||||||    
T  1927878 acatcatcactaaaatacatgggggccttcaaaccagaaa-ggggaaaaagatagggtgcaaaatcgc 1927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 10348585 - 10348482
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || |||  ||||||||||||||||||| |||||| |||||||| | ||||||| ||||  ||| ||| |||||||||||    
T  10348585 aaatcagaaaggggaaaaactataggggacaaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaa 10348486  T
Q  139 ttaa 142  Q
    ||||    
T  10348485 ttaa 10348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 20968808 - 20968721
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||| |||| ||||||||||    
T  20968808 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaa 20968721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 36180968 - 36181047
Alignment:
Q  69 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    |||||||||||||||||| |||||||| |||||||||||||||  ||||  ||||||  ||||||||||||||| |||||    
T  36180968 aaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcctaa 36181047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 44008349 - 44008451
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||||| |||||  || ||| | ||||| |||||||||||| |||| |||||||||| ||||||||||||||  ||| || ||||||||||||    
T  44008349 aaatcagaaagggagaaaactatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaa 44008447  T
Q  139 ttaa 142  Q
    ||||    
T  44008448 ttaa 44008451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 1927834 - 1927766
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaa 151  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| |||| |||||||||| || |||||    
T  1927834 aaaaagatagggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagccaaaaaa 1927766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 17372387 - 17372301
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| |||||| |||||||  ||| ||||||||||    
T  17372387 aaaagatggggtgcaaaatcgctcaaa-aaaaacagggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaa 17372301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 13657621 - 13657675
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  13657621 ggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaac 13657675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 18874935 - 18874887
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaatt 140  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatt 18874887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 21895720 - 21895652
Alignment:
Q  83 aaaaatatggggtgcaaaatcgcacaattggcaaaagatag-gggtgaaaagtgcaattaaacctaaaa 150  Q
    ||||| ||||||||||||||| |||||||||||||| |||| |||  |||||||||||||| |||||||    
T  21895720 aaaaagatggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcctaaaa 21895652  T

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Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 47666017 - 47665905
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||| ||||||||||||  || ||  | |||||| ||||||| |||  ||| |||||||||||||||||||| ||||  ||| |||  ||||||||||    
T  47666017 aaatcaaaaagggggaaaactataggtggtaaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaa 47665918  T
Q  139 ttaaacctaaaaa 151  Q
    |||| ||||||||    
T  47665917 ttaagcctaaaaa 47665905  T

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Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 17372433 - 17372527
Alignment:
Q  50 ggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||| ||||||||||||||||||| ||||    ||||| | |||||||||||||||||||||||| |||||||||||   |||||||| |||||||    
T  17372433 ggggcaaaagatggggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaaac 17372527  T

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Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 42627511 - 42627596
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| ||||||||||||||||||| |  ||||| | ||| ||||||||| ||||||| ||||||||||| || |||||||||||||||    
T  42627511 aaaaaatggggtgcaaaatcgctcataaaaaaaga-gggatgcaaaatcacacaattagcaaaagatagagg-gaaaagtgcaattaa 42627596  T

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Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 44008073 - 44007970
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||| ||||  || ||| |||||||||||||||||||| |||  | |||||| | |||||||||  |||  ||||||  |||||||||||    
T  44008073 aaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaa 44007974  T
Q  139 ttaa 142  Q
    ||||    
T  44007973 ttaa 44007970  T

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Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 47870910 - 47870821
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||||||||    ||||| | ||||||||||| ||||| |||| ||||||||||||||  |||||||||||||| ||||    
T  47870910 aaaagatggggtgcaaaatcgctc---aaaaaaaaaggggtgcaaaattcgcataattagcaaaagatagggg-aaaaagtgcaattaagccta 47870821  T

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Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 42455853 - 42455787
Alignment:
Q  82 taaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||| ||| ||| ||||||||||||||||| ||||  ||||||| ||||||||||||||| |||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctaa 42455787  T

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Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 53766569 - 53766630
Alignment:
Q  81 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||| ||| ||||||||||| |||||||| |||||  ||||||| |||||||||||||||    
T  53766569 ttaaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaa 53766630  T

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Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 8315083 - 8315138
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaa 148  Q
    ||||||||||||||||||||| ||||| ||||||| | ||||||||||||| |||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatatagggg-ggaaagtgcaattaagcctaa 8315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 13657536 - 13657472
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaata-tggggtgcaaaatcgcacaattggcaaaa 118  Q
    ||||||||||||||||||||||||    ||||| |  ||||||||||||||||||||||||||||    
T  13657536 aaaagatggggtgcaaaatcgctcaaaaaaaaagaggggggtgcaaaatcgcacaattggcaaaa 13657472  T

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Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 14015746 - 14015690
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaa 149  Q
    ||||||||||||||| |||| |||||||||  ||  |||||||||||||||||||||    
T  14015746 ggtgcaaaatcgcacgattgacaaaagataaaggaaaaaagtgcaattaaacctaaa 14015690  T

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Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 14015873 - 14015925
Alignment:
Q  94 gtgcaaaatcgcacaattggc-aaaagataggggtg-aaaagtgcaattaaac 144  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  14015873 gtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaaac 14015925  T

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Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 18874996 - 18874957
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgct 77  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  18874996 aaatcagaaagggggcaaaaagatggggtgcaaaatcgct 18874957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 21895735 - 21895700
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatc 74  Q
    |||||||||||||| |||||||||||||||||||||    
T  21895735 aaatcagaaaggggaaaaaagatggggtgcaaaatc 21895700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 31577450 - 31577415
Alignment:
Q  115 aaaagataggggtgaaaagtgcaattaaacctaaaa 150  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31577450 aaaagataggggtcaaaagtgcaattaaacctaaaa 31577415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 1100968 - 1100918
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| |||||||||||||| |||||||||||||  || ||||||||||||    
T  1100968 gggtgaaaaatcgcacaatttgcaaaagatagggtggataagtgcaattaa 1100918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 1101090 - 1101143
Alignment:
Q  91 ggggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  1101090 ggggtgcaaaatcgcacaattgacaaaaagatagggg-caaaagtgcaattaaac 1101143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 23630035 - 23630089
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    |||||||||||||||||||||  ||||| ||||| |  |||||||||||||||||    
T  23630035 ggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaaacc 23630089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 3644781 - 3644834
Alignment:
Q  89 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||  ||||| ||| ||| ||||| |||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaa 3644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 45060644 - 45060599
Alignment:
Q  97 caaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||| |||| ||||||||||| || |||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaa 45060599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 1101182 - 1101242
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacctaaaaat 152  Q
    ||||| ||||||||||||   |||||||||| ||| ||||||||||||||| |||| ||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagcctagaaat 1101242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 17372594 - 17372643
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||| | |||| ||||||  |||||||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatataggg--gaaaagtgcaattaa 17372643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  93 ggtgcaaaatcgcacaattggc-aaaagataggggtgaaaagtgcaatt 140  Q
    ||||||||||||||||||| || ||||||||||||  ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 26540744 - 26540693
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaa 143  Q
    |||||||||||| ||||||||| ||||| |||||||  |||||||||||||||    
T  26540744 ggggtgcaaaattgcacaattgacaaaaaatagggg-caaaagtgcaattaaa 26540693  T

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Target: scaffold0110 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 45754 - 45869
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  45754 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggg-gaaaagtgca 45852  T
Q  138 attaaacctaaaaataa 154  Q
    ||||| ||||| |||||    
T  45853 attaagcctaataataa 45869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 45626 - 45540
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||    ||||| | || ||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  45626 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 45540  T

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Target: scaffold0802 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 1367 - 1471
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  1367 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgca 1466  T
Q  138 attaa 142  Q
    |||||    
T  1467 attaa 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 1208 - 1121
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||| ||||||||||||||||    ||||| | |||||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  1208 aaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaa 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 185222 - 185325
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    ||||||||||| |||||||  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||  |||||||||||    
T  185222 aaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaa 185321  T
Q  139 ttaa 142  Q
    ||||    
T  185322 ttaa 185325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 184945 - 184842
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||  |||||||||||||||||||| ||||||||||||||| ||||| ||| ||||  |||| || |||||||||||    
T  184945 aaatcagaaagggggaaaactataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaa 184846  T
Q  139 ttaa 142  Q
    ||||    
T  184845 ttaa 184842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 6644 - 6747
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6644 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgca 6742  T
Q  138 attaa 142  Q
    |||||    
T  6743 attaa 6747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 6485 - 6397
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaat-atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||     |||||  | ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  6485 aaaagatggggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 25316 - 25420
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||| |||| |||||||||||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  25316 aaatcagaaatggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 25415  T
Q  138 attaa 142  Q
    |||||    
T  25416 attaa 25420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 436 - 333
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||| ||||||||  || ||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||  ||||||| |||||||||||    
T  436 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 337  T
Q  139 ttaa 142  Q
    ||||    
T  336 ttaa 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 739 - 813
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  739 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggg-aaaaagtgcaattaa 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 38643 - 38746
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaa 138  Q
    |||||||||||||||||||  || ||| ||||||||| |||||||| | ||||||||||||||||||||||||||||||  |||||||  ||||||||||    
T  38643 aaatcagaaagggggaaaactatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaa 38742  T
Q  139 ttaa 142  Q
    ||||    
T  38743 ttaa 38746  T

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Target: scaffold0041; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 38357 - 38284
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattg 112  Q
    ||||||||||| |||||||  || ||| |||||||||||| ||||||| |||||| ||||||||||||||||||    
T  38357 aaatcagaaagagggaaaactatagggggcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaattg 38284  T

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Target: scaffold0029 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 10012 - 9908
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatat-ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||||  |||||||  |||||||||    
T  10012 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgca 9913  T
Q  138 attaa 142  Q
    |||||    
T  9912 attaa 9908  T

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Target: scaffold0001 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 439019 - 438933
Alignment:
Q  56 aaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  439019 aaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 438933  T

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Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 439165 - 439255
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    ||||||||||||||||||||||||    ||||| | ||| ||||||||||||||||| |||||||||| |||  |||||||||||||| ||||    
T  439165 aaaagatggggtgcaaaatcgctcaa--aaaaagaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

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Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 183416 - 183364
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggg-gaaaagtgcaattaaacc 183364  T

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Target: scaffold0001; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 142
Target Start/End: Original strand, 183621 - 183713
Alignment:
Q  49 gggggaaaaagatggggtgcaaaatcgctcgtttaaa-aatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||| ||||||||||| |||||||||||||   |||| || | |||||||||| |||||||||| |||||| ||||||| |||||||||||||||    
T  183621 ggggcaaaaagatggg-tgcaaaatcgctcaaataaagaagagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaa 183713  T

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Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 183544 - 183594
Alignment:
Q  95 tgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaac 144  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||||||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaac 183594  T

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Target: scaffold0069 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 50454 - 50557
Alignment:
Q  39 aaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatat-ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||  || ||| ||||||| |||||||||||| ||| |||||||||||||||||||||||||||  ||||||| ||||||||||    
T  50454 aaatcagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgca 50552  T
Q  138 attaa 142  Q
    |||||    
T  50553 attaa 50557  T

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Target: scaffold0069; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 50151 - 50078
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||||  ||||||  | |||||||||||||    
T  50151 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggg--ggaaagtgcaattaa 50078  T

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Target: scaffold0176 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 19698 - 19624
Alignment:
Q  67 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||    
T  19698 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggg-gaaaattgcaattaa 19624  T

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Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 20031 - 20099
Alignment:
Q  79 gtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccta 147  Q
    |||||||| ||||||| ||||||||||||||||| ||||  ||| ||| ||||||||||||||| ||||    
T  20031 gtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagccta 20099  T

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Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 412028 - 411926
Alignment:
Q  39 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgca 137  Q
    ||||||||||||||| |||||||| |||||||||||||||     ||||| | |||||||||||||||||||||| ||||||||||||| | ||||||||    
T  412028 aaatcagaaagggggcaaaaagatagggtgcaaaatcgcttaaa-aaaaagagggggtgcaaaatcgcacaattgacaaaagatagggg-gtaaagtgca 411931  T
Q  138 attaa 142  Q
    |||||    
T  411930 attaa 411926  T

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Target: scaffold0535 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 10114 - 10015
Alignment:
Q  43 cagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||| ||||||  | || |||||||| ||  ||||||  || || |||||||||| |||||||||||||||||||||  ||||||||||||||    
T  10114 cagaaagggggcaaaagagagtgtacaaaatcgttcaattaaaaggattggatgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaa 10015  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 16960 - 16870
Alignment:
Q  39 aaatcagaaaggg-ggaaaaagatggggtgcaaaatcgctc--gtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggg 126  Q
    ||||||||||||| |||||||||||||||||||||||||||      ||||| | |||||||| |||||||||||| ||||||||||||||    
T  16960 aaatcagaaagggaggaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagagggggtgcataatcgcacaattagcaaaagatagggg 16870  T

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Target: scaffold0015; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 17119 - 17206
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatgg-ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||||||||||||    |||||   || |||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  17119 aaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgcaaaattgcacaattagcaaaagatagggg-gaaaagtgcaattaa 17206  T

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Target: scaffold1221 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 1566 - 1514
Alignment:
Q  89 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagatagagg-aaaaagtgcaattaa 1514  T

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Target: scaffold1221; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 1786 - 1837
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 145  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||||||||    
T  1786 ggtgcaaaatcgcacaataaacaaaagatagggg-gaaaagtgcaattaaacc 1837  T

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Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 7510 - 7458
Alignment:
Q  89 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  7510 atggggtgcaaaatcgcataattagcaaaagatagggg-aaaaagtgcaattaa 7458  T

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Target: scaffold0376; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 7600 - 7650
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||| ||||||||||||||| ||||||||||||||  ||||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagatagggg-aaaaagtgcaattaa 7650  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 205774 - 205690
Alignment:
Q  55 aaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    |||||||| |||||||||||| ||    ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| |||||||||    
T  205774 aaaagatgaggtgcaaaatcgttcaa--aaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggagaaaaatgcaattaa 205690  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 6877 - 6925
Alignment:
Q  92 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagatagggg-ggaaagtgcaattaa 6925  T

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Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 6659 - 6610
Alignment:
Q  93 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 142  Q
    ||||||||||| |||||||  ||||||||||||| ||| |||||||||||    
T  6659 ggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaa 6610  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 73141 - 73087
Alignment:
Q  91 ggggtgcaaaatcgcacaattggcaaaa-gataggggtgaaaagtgcaattaaac 144  Q
    |||||||||||||||||| ||| ||||| ||||||||  ||||||||||||||||    
T  73141 ggggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaac 73087  T

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