View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15800_high_9 (Length: 313)
Name: NF15800_high_9
Description: NF15800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15800_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 48372715 - 48372997
Alignment:
| Q |
17 |
tgaaaggtcgcttttttagattggtttgcggatgaaacatgttttagtcacttatgtgattttgatctctgtctttgaaattgttactatccaatnnnnn |
116 |
Q |
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| T |
48372715 |
tgaaaggtcgcttttttagattggtttgcggatgaaacatgttttagtcacttatgtgattttgatctctgtctttgaaattgttactatccaataaaag |
48372814 |
T |
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| Q |
117 |
nnntcaataaactatacacacattaataattgatctctgtctttgagtctatttttgttgtgtttaacattttttccctcctgtagttctgatccgttca |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48372815 |
aaatcaataaactatacacacattaataattgatctctgtctttgagtctatttttgttgtgtttaacattttttccctcctgtagttctgatccgttca |
48372914 |
T |
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| Q |
217 |
gcataaaaacttcaaatgtaatgtgttttgcaatcaaacaacttgnnnnnnncacgaccgacggtaaatgaatagttcaaatt |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
48372915 |
gcataaaaacttcaaatgtaatgtgttttgcaatcaaacaacttgaaaaaaacacgaccgacggtaaatgaatagttcaaatt |
48372997 |
T |
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