View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15800_low_17 (Length: 210)
Name: NF15800_low_17
Description: NF15800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15800_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 34935487 - 34935683
Alignment:
| Q |
1 |
agtaaatatactcttccttgatttccgtnnnnnnngaaaa--cattattccttgatttattcgcatgtttcaactcagacaaaaccttaacctaaccggt |
98 |
Q |
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| T |
34935487 |
agtaaatatactcttccttgatttccgtaaaaaaaaaaaaaacattattccttgatttattcgcatgtttcaactcagacaaaaccttaacctaaccggt |
34935586 |
T |
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| Q |
99 |
cgcaacagctttatgggatgggatgaccaccggcggctcgcaatgaaaagaaagagaaacgactctctcaattcttcagatgattttgacttacctgatg |
198 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
34935587 |
cgcaacagcttt-----atgggatgaccaccggcggctcgcaatgaaaagaaagagaaacgactctctcaattcttcagatgattttgatttacctgatg |
34935681 |
T |
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