View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15801_low_2 (Length: 558)

Name: NF15801_low_2
Description: NF15801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15801_low_2
NF15801_low_2
[»] scaffold0505 (2 HSPs)
scaffold0505 (242-540)||(11161-11459)
scaffold0505 (132-241)||(11501-11610)
[»] chr3 (20 HSPs)
chr3 (242-540)||(13086245-13086543)
chr3 (132-241)||(13086585-13086694)
chr3 (132-227)||(19833489-19833586)
chr3 (155-227)||(15619740-15619812)
chr3 (155-227)||(15627088-15627160)
chr3 (282-392)||(294421-294531)
chr3 (143-237)||(13105574-13105669)
chr3 (143-237)||(13111722-13111817)
chr3 (140-237)||(14881249-14881345)
chr3 (143-237)||(14893083-14893176)
chr3 (145-237)||(4313532-4313625)
chr3 (141-237)||(21638494-21638591)
chr3 (156-237)||(23288071-23288152)
chr3 (132-237)||(9523692-9523798)
chr3 (132-181)||(14740067-14740117)
chr3 (140-181)||(12701122-12701163)
chr3 (162-223)||(14252449-14252510)
chr3 (140-237)||(14887975-14888071)
chr3 (319-387)||(2000799-2000867)
chr3 (155-195)||(37468127-37468167)
[»] chr7 (14 HSPs)
chr7 (285-425)||(20589957-20590097)
chr7 (256-443)||(7587704-7587891)
chr7 (285-429)||(12324600-12324744)
chr7 (152-232)||(8913403-8913483)
chr7 (296-387)||(21259286-21259378)
chr7 (140-223)||(3336483-3336566)
chr7 (140-237)||(43906134-43906231)
chr7 (354-527)||(13393233-13393411)
chr7 (145-237)||(22346902-22346994)
chr7 (308-387)||(11587264-11587343)
chr7 (140-178)||(42017737-42017775)
chr7 (156-205)||(11578917-11578966)
chr7 (156-197)||(15683225-15683266)
chr7 (132-195)||(4891270-4891334)
[»] chr1 (19 HSPs)
chr1 (139-241)||(20518312-20518413)
chr1 (140-232)||(20521294-20521386)
chr1 (132-234)||(39454419-39454521)
chr1 (135-227)||(19763267-19763359)
chr1 (141-237)||(35070070-35070167)
chr1 (132-227)||(6205628-6205725)
chr1 (156-227)||(6197803-6197874)
chr1 (143-241)||(18098406-18098505)
chr1 (143-237)||(44832491-44832586)
chr1 (132-181)||(13450125-13450175)
chr1 (132-237)||(16366078-16366184)
chr1 (143-184)||(1955905-1955946)
chr1 (162-237)||(13185818-13185892)
chr1 (143-185)||(1961724-1961766)
chr1 (157-223)||(16884567-16884633)
chr1 (145-195)||(20429431-20429481)
chr1 (143-189)||(49932677-49932723)
chr1 (140-237)||(47108408-47108505)
chr1 (337-401)||(17852639-17852703)
[»] chr4 (10 HSPs)
chr4 (132-234)||(15567761-15567864)
chr4 (132-234)||(15580406-15580509)
chr4 (143-237)||(20548416-20548510)
chr4 (144-209)||(25984432-25984497)
chr4 (165-234)||(3439664-3439731)
chr4 (302-387)||(15701532-15701617)
chr4 (157-237)||(39534210-39534290)
chr4 (143-237)||(19737944-19738039)
chr4 (145-237)||(50187818-50187912)
chr4 (139-238)||(4619868-4619967)
[»] scaffold0001 (1 HSPs)
scaffold0001 (140-226)||(4803-4889)
[»] chr8 (10 HSPs)
chr8 (157-234)||(24487866-24487943)
chr8 (140-232)||(24655275-24655366)
chr8 (157-234)||(6030886-6030961)
chr8 (143-237)||(22162922-22163017)
chr8 (140-204)||(15061268-15061332)
chr8 (140-237)||(14891796-14891892)
chr8 (132-227)||(27808506-27808602)
chr8 (143-181)||(22156921-22156959)
chr8 (156-209)||(13385746-13385799)
chr8 (143-195)||(31999841-31999893)
[»] scaffold0458 (1 HSPs)
scaffold0458 (132-234)||(9197-9299)
[»] scaffold0027 (1 HSPs)
scaffold0027 (143-237)||(23618-23712)
[»] chr2 (15 HSPs)
chr2 (157-234)||(21064724-21064799)
chr2 (156-237)||(12370403-12370484)
chr2 (297-420)||(27109856-27109977)
chr2 (143-235)||(18224-18317)
chr2 (157-227)||(21068302-21068372)
chr2 (140-237)||(20279266-20279362)
chr2 (162-209)||(19884359-19884406)
chr2 (143-237)||(36735368-36735463)
chr2 (315-401)||(21529173-21529259)
chr2 (132-181)||(21755754-21755804)
chr2 (132-237)||(45489255-45489360)
chr2 (140-241)||(15814260-15814361)
chr2 (143-195)||(11873762-11873814)
chr2 (157-237)||(22518913-22518993)
chr2 (162-230)||(41829339-41829407)
[»] chr6 (20 HSPs)
chr6 (157-241)||(21961638-21961720)
chr6 (162-234)||(22631732-22631803)
chr6 (307-387)||(19076371-19076451)
chr6 (290-386)||(25803393-25803489)
chr6 (157-232)||(20050925-20051000)
chr6 (157-232)||(20058788-20058863)
chr6 (143-237)||(12667472-12667568)
chr6 (132-195)||(1624973-1625037)
chr6 (359-482)||(12386319-12386447)
chr6 (157-237)||(19169141-19169221)
chr6 (140-232)||(22764825-22764916)
chr6 (132-180)||(28269591-28269639)
chr6 (132-180)||(28348341-28348389)
chr6 (140-237)||(28702819-28702918)
chr6 (140-195)||(22599654-22599709)
chr6 (132-181)||(25711845-25711895)
chr6 (132-180)||(27616530-27616579)
chr6 (165-209)||(7245433-7245477)
chr6 (155-207)||(14779901-14779953)
chr6 (132-195)||(22069237-22069301)
[»] scaffold0815 (1 HSPs)
scaffold0815 (132-227)||(4966-5062)
[»] scaffold0441 (1 HSPs)
scaffold0441 (157-234)||(2509-2584)
[»] chr5 (13 HSPs)
chr5 (145-227)||(22704531-22704612)
chr5 (140-237)||(40014911-40015008)
chr5 (143-241)||(20099585-20099684)
chr5 (143-237)||(36454662-36454757)
chr5 (140-237)||(15956913-15957012)
chr5 (143-237)||(36448284-36448379)
chr5 (346-392)||(22406039-22406085)
chr5 (334-423)||(17917424-17917513)
chr5 (140-237)||(37048379-37048475)
chr5 (143-237)||(20092688-20092783)
chr5 (155-209)||(13358500-13358554)
chr5 (155-209)||(38227823-38227877)
chr5 (132-203)||(18955183-18955255)
[»] scaffold0050 (1 HSPs)
scaffold0050 (157-223)||(41215-41281)
[»] scaffold0059 (1 HSPs)
scaffold0059 (282-386)||(51376-51480)
[»] scaffold0101 (1 HSPs)
scaffold0101 (140-223)||(16472-16554)
[»] scaffold0067 (1 HSPs)
scaffold0067 (156-227)||(44542-44612)
[»] scaffold0378 (1 HSPs)
scaffold0378 (157-223)||(819-885)
[»] scaffold0037 (1 HSPs)
scaffold0037 (318-392)||(111536-111610)
[»] scaffold0167 (1 HSPs)
scaffold0167 (140-237)||(8015-8111)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-232)||(362779-362880)
[»] scaffold0028 (1 HSPs)
scaffold0028 (154-237)||(65873-65957)
[»] scaffold1890 (1 HSPs)
scaffold1890 (143-227)||(884-970)
[»] scaffold0323 (1 HSPs)
scaffold0323 (156-227)||(17669-17739)
[»] scaffold0206 (1 HSPs)
scaffold0206 (132-181)||(9017-9067)
[»] scaffold0125 (1 HSPs)
scaffold0125 (132-189)||(8220-8278)
[»] scaffold0473 (1 HSPs)
scaffold0473 (156-237)||(9113-9193)
[»] scaffold0315 (1 HSPs)
scaffold0315 (334-395)||(12329-12390)
[»] scaffold0226 (1 HSPs)
scaffold0226 (316-385)||(8814-8883)
[»] scaffold0032 (1 HSPs)
scaffold0032 (162-223)||(29068-29129)
[»] scaffold0016 (1 HSPs)
scaffold0016 (144-237)||(58607-58699)
[»] scaffold0540 (1 HSPs)
scaffold0540 (143-179)||(2844-2880)
[»] scaffold0420 (1 HSPs)
scaffold0420 (132-219)||(10953-11041)
[»] scaffold0020 (1 HSPs)
scaffold0020 (175-227)||(106436-106488)


Alignment Details
Target: scaffold0505 (Bit Score: 291; Significance: 1e-163; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 242 - 540
Target Start/End: Complemental strand, 11459 - 11161
Alignment:
Q  242 aaatagtaacatgtttagcagattcactttcaacttccttttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaa 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11459 aaatagtaacatgtttagcagattcactttcaacttccttttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaa 11360  T
Q  342 tgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttcaca 441  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11359 tgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttgaca 11260  T
Q  442 tttctaggttctgatgttggacctgatgttctgaacatttgacctaggtcttctgtcaacttgtttcaagattctcctgaactgttttccaagaagcac 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11259 tttctaggttctgatgttggacctgatgttctgaacatttgacctaggtcttctgtcaacttgtttcaagattctcctgaactgttttcctagaagcac 11161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 11610 - 11501
Alignment:
Q  132 agagaagaggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgac 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11610 agagaagaggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgac 11511  T
Q  232 atgtgttagt 241  Q
    ||||||||||    
T  11510 atgtgttagt 11501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 287; Significance: 1e-161; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 242 - 540
Target Start/End: Complemental strand, 13086543 - 13086245
Alignment:
Q  242 aaatagtaacatgtttagcagattcactttcaacttccttttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaa 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13086543 aaatagtaacatgtttagcagattcactttcaacttccttttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaa 13086444  T
Q  342 tgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttcaca 441  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13086443 tgtggcacattttgttttgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttgaca 13086344  T
Q  442 tttctaggttctgatgttggacctgatgttctgaacatttgacctaggtcttctgtcaacttgtttcaagattctcctgaactgttttccaagaagcac 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13086343 tttctaggttctgatgttggacctgatgttctgaacatttgacctaggtcttctgtcaacttgtttcaagattctcctgaactgttttcctagaagcac 13086245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 13086694 - 13086585
Alignment:
Q  132 agagaagaggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgac 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13086694 agagaagaggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgac 13086595  T
Q  232 atgtgttagt 241  Q
    ||||||||||    
T  13086594 atgtgttagt 13086585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 19833586 - 19833489
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaag-gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||||  ||||||||||||  |||||| |||||||||||||||||||||||    
T  19833586 agagaagagggcccgactcggattcaaaaaatgaggtattttaaaatacctccctgtcgatttttttgttgaaatgtcagggactgatcagggtcaaa 19833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 15619812 - 15619740
Alignment:
Q  155 caaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||| ||||||||||||||||||||| || ||| ||||||||||||| ||||| ||||||||| |||||||    
T  15619812 caaaaatgaggtattttaaaatacctctctgccgaatttttcattgaaatgtcagagactgatcaaggtcaaa 15619740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 15627160 - 15627088
Alignment:
Q  155 caaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||| ||||||||||||||||||||| || ||| ||||||||||||| ||||| ||||||||| |||||||    
T  15627160 caaaaatgaggtattttaaaatacctctctgccgaatttttcattgaaatgtcagagactgatcaaggtcaaa 15627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 392
Target Start/End: Original strand, 294421 - 294531
Alignment:
Q  282 ttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacat 381  Q
    |||||| |||||||||| |||||| ||||||   || ||||||||||||   || ||| | || ||||||| |||||| |||||||||||||||||||||    
T  294421 ttcagattcatcatcatgagaccatgaaacagttaagcttttcttttgtttcttaagataagtagcacattctgttctaatgtgaccatatccttcacat 294520  T
Q  382 tcatgatattg 392  Q
    |||||| ||||    
T  294521 tcatgacattg 294531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 13105574 - 13105669
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  13105574 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 13105669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 13111722 - 13111817
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  13111722 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 13111817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 14881249 - 14881345
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  || ||| | ||| |||||||| |||| ||  |||||| ||||| ||||||||||    
T  14881249 ggcccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaatattt-attgaaaaatcagagatcgatcagagtcaagtgacatgtgt 14881345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 14893083 - 14893176
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || ||| ||||| | |||||| |||| ||  |||||| ||||| ||||||||||    
T  14893083 ccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgt 14893176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 4313532 - 4313625
Alignment:
Q  145 gactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||| | ||||||| ||||||||||||||||||||  ||||| ||||||||| |||||| | || ||  |||||| ||||| ||||||||||    
T  4313532 gactcgaaatcaaaaatgaggtattttaaaatacctccctgtcgaattttttcactgaaaaattagagatcgatcagagtcaagtgacatgtgt 4313625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 21638494 - 21638591
Alignment:
Q  141 gcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||||| | ||||| || ||||||||||||| |||| || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  21638494 gcccgactcggaataaaaaatgaagtattttaaaataactctctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 21638591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 23288071 - 23288152
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||| ||||||||||||||||||||  || ||| ||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  23288071 aaaaatgaggtattttaaaatacctccctgccgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 23288152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 9523692 - 9523798
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    |||||||||| ||||||||| |  |||||| |||||||||||||||| |||  || ||| ||||| | ||||| ||||| ||||||| ||||| ||| ||    
T  9523692 agagaagagggcccgactcgaaaccaaaaatgaggtattttaaaatatctccctgccgaattttttactgaaacgtcagagactgattagggttaaacga 9523791  T
Q  231 catgtgt 237  Q
    | |||||    
T  9523792 cgtgtgt 9523798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 14740067 - 14740117
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    |||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  14740067 agagaagagggcccgactcggaatcaaatatgaggtattttaaaatacctc 14740117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 12701163 - 12701122
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    ||||||||||||| ||||| | ||||||||||||||||||||    
T  12701163 ggcccgactcggaatcaaatatgaggtattttaaaatacctc 12701122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 14252510 - 14252449
Alignment:
Q  162 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    ||||||||||||||||||||| || ||| ||||||| |||||| |||| || |||| |||||    
T  14252510 gaggtattttaaaatacctctctgccgaatttttcactgaaaaatcagagattgattagggt 14252449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 14887975 - 14888071
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||||||  |||||| ||| ||||||||||||||||| ||  || ||||| | |||||| |||| ||  |||||| ||||| ||||||||||    
T  14887975 ggcccgactcggagccaaaaatgagatattttaaaatacctctctgctgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgt 14888071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 387
Target Start/End: Complemental strand, 2000867 - 2000799
Alignment:
Q  319 cttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatga 387  Q
    ||||||||||||   |||||||| |||| ||||| |||  | || ||||||||||||||||||||||||    
T  2000867 cttttcttttgtttcttgagaaaagtggtacattctgtcataatatgaccatatccttcacattcatga 2000799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 37468167 - 37468127
Alignment:
Q  155 caaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||| ||||||||||||||||||| | ||||||||||||    
T  37468167 caaaaatgaggtattttaaaatacctttctgtcgatttttt 37468127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 285 - 425
Target Start/End: Complemental strand, 20590097 - 20589957
Alignment:
Q  285 agagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattca 384  Q
    ||||||||| ||||||||||||||||||| |||  ||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  20590097 agagtcatcttcatcagaccaagaaacaaccaagattttcttttgtctcttgagaaatgtggcacattttgatctaatgtgaccatatccttcacattca 20589998  T
Q  385 tgatattggaccccctttgattgagtgctcttttcatcagt 425  Q
    ||| | ||||| ||||| |||||| ||||||| ||||||||    
T  20589997 tgacactggactcccttggattgactgctcttctcatcagt 20589957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 256 - 443
Target Start/End: Complemental strand, 7587891 - 7587704
Alignment:
Q  256 ttagcagattcactttcaacttccttttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttg 355  Q
    |||||| ||||| |||| |||||   ||| |||| ||| ||||||||||||||||||| ||| |||||||| |||   ||||| || ||||||||||  |    
T  7587891 ttagcatattcattttccacttctccttctgagttatcttcatcagaccaagaaacaaccaagcttttcttctgtttcttgaggaaagtggcacattcag 7587792  T
Q  356 ttctgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttcacatt 443  Q
    ||||||||| |||||||||||||||||||||| |||| || ||||| |||||| || | || ||||||| | |||| |||||||||||    
T  7587791 ttctgatgtaaccatatccttcacattcatgacattgaactcccttggattgattgttattgtcatcagattttaccttcttcacatt 7587704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 285 - 429
Target Start/End: Original strand, 12324600 - 12324744
Alignment:
Q  285 agagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattca 384  Q
    |||||||||  |||| ||||||||||||| |||||||||||| |||  ||| ||||| | |||||||| ||||||||| || |||||||||||||| |||    
T  12324600 agagtcatctccatctgaccaagaaacaaccaaacttttcttctgtttttttagaaaagaggcacattatgttctgatatgcccatatccttcacactca 12324699  T
Q  385 tgatattggaccccctttgattgagtgctcttttcatcagttctt 429  Q
    ||| |||| || || ||  ||||||   |||||||||||| ||||    
T  12324700 tgacattgaacacctttgtattgagaattcttttcatcagatctt 12324744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8913403 - 8913483
Alignment:
Q  152 attcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgaca 232  Q
    ||||||||| ||||||||||||||||||||| || ||| ||||||| |||||||  ||||| |||||||| ||||| ||||    
T  8913403 attcaaaaatgaggtattttaaaatacctctctgccgaatttttcactgaaaagatagggattgatcaggatcaaacgaca 8913483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 387
Target Start/End: Original strand, 21259286 - 21259378
Alignment:
Q  296 catcagaccaagaaacaaacaaacttttcttttgtcctttga-gaaatgtggcacattttgttctgatgtgaccatatccttcacattcatga 387  Q
    |||| ||||| ||||||| ||| |||||||||| | |||| | |||| |||||||||| |||||||||||||||||  |||||||||||||||    
T  21259286 catctgaccatgaaacaaccaagcttttctttttttcttttaagaaaggtggcacattctgttctgatgtgaccatggccttcacattcatga 21259378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 3336483 - 3336566
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    ||||||||||| |   ||||| ||||||||||||||||||||  |||||| ||||| | ||||| ||||| |||||||||||||    
T  3336483 ggcccgactcgaaacaaaaaatgaggtattttaaaatacctccctgtcgaattttttactgaaacgtcagagactgatcagggt 3336566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 43906231 - 43906134
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggta-ttttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| ||||||| |||||| |||||||||||||| ||| ||| ||||| | |||||| |||| ||  ||||||| |||| ||||||||||    
T  43906231 ggcccgactcggaatcaaaaatgaggtatttttaaaatacctccttgccgaattttt-actgaaaaatcagagatcgatcaggatcaagtgacatgtgt 43906134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 354 - 527
Target Start/End: Complemental strand, 13393411 - 13393233
Alignment:
Q  354 tgttctgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttcacatttctaggtt-- 451  Q
    |||||||||||| ||| | ||||||| ||||||  | || || |||||||||||||||  ||| ||||||||||||  ||| ||||||| || | |||      
T  13393411 tgttctgatgtgtccaaacccttcaccttcatggcactgaactccctttgattgagtgtccttctcatcagttcttgtatttttcacatatccatgttga 13393312  T
Q  452 ctg---atgttggacctgatgttctgaacatttgacctaggtcttctgtcaacttgtttcaagattctcctgaactgtt 527  Q
    |||   |||||| ||||||||||||||||||| |  ||| | |   | ||||||||||||||||| ||| |||||||||    
T  13393311 ctgtcaatgttgtacctgatgttctgaacattcgttctaagccaattctcaacttgtttcaagatcctcatgaactgtt 13393233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 22346994 - 22346902
Alignment:
Q  145 gactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||| | ||||| ||||||||||||||||||||  || ||| ||||| | |||||| |||| ||  |||||| ||||| ||||||||||    
T  22346994 gactcggaataaaaaatgaggtattttaaaatacctccctgccgaattttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 22346902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 11587264 - 11587343
Alignment:
Q  308 aaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatga 387  Q
    ||||| ||| ||||||||||||    |||| ||| |||| ||||| |||||| |||||||||||||||||||| ||||||    
T  11587264 aaacagacagacttttcttttgcttcttgataaaagtggtacattctgttctaatgtgaccatatccttcacactcatga 11587343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 42017737 - 42017775
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatac 178  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  42017737 ggcccgactcggatttaaaaatgaggtattttaaaatac 42017775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 11578966 - 11578917
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaag 205  Q
    ||||| ||||||||||||||||||||| || ||| |||||| ||||||||    
T  11578966 aaaaatgaggtattttaaaatacctctctgccgaatttttctttgaaaag 11578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 15683266 - 15683225
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttca 197  Q
    ||||| ||||||||||||||||| |||||||||| |||||||    
T  15683266 aaaaatgaggtattttaaaatacttctttgtcgaatttttca 15683225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 4891270 - 4891334
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||||||| ||||||||||| ||||  | ||||||||||||||||||||  || |||||||||    
T  4891270 agagaagagggcccgactcggaatcaactatgaggtattttaaaatacctccctgccgatttttt 4891334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 20518413 - 20518312
Alignment:
Q  139 aggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgtt 238  Q
    |||||||||||||||||||||| |||||||||||||||| || |||| ||| |||||| |||||||||||||||||||||| |||||||||||||| |||    
T  20518413 aggcccgactcggattcaaaaatgaggtattttaaaatatctatttgccga-tttttccttgaaaagtcagggactgatcatggtcaaatgacatgcgtt 20518315  T
Q  239 agt 241  Q
    |||    
T  20518314 agt 20518312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 20521294 - 20521386
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgaca 232  Q
    |||| |||||||||| ||||| ||||||||||||||||||| | || ||| ||||||| ||||||| ||||||||||||||| ||||||||||    
T  20521294 ggcctgactcggatttaaaaatgaggtattttaaaatacctttatgccgaatttttcactgaaaagacagggactgatcaggatcaaatgaca 20521386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 39454521 - 39454419
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| |||||   |   ||||||| ||||||||||| |||||||||||||||||||||||    
T  39454521 agagaagagggcccgactcggattcaaaaatgaggtattttaaagtaccttcatagagattttt-cattgaaaagttagggactgatcagggtcaaatga 39454423  T
Q  231 catg 234  Q
    ||||    
T  39454422 catg 39454419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 19763267 - 19763359
Alignment:
Q  135 gaagaggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    ||||||||||||||||||  | |||| ||||||||||||||||||| | || ||| ||||||| ||||||||||||||||||| ||| |||||    
T  19763267 gaagaggcccgactcggaaccgaaaatgaggtattttaaaatacctatctgccgaatttttcactgaaaagtcagggactgattaggatcaaa 19763359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 35070167 - 35070070
Alignment:
Q  141 gcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||||| | ||||| |||||||||||||||||||||||| || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  35070167 gcccgactcggaataaaaaatgaggtattttaaaatacctctttgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 35070070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 6205628 - 6205725
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaag-gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||||||| |||||||||||  ||||||  ||||||||||||||||||||| || ||| ||||| ||||||| ||||| ||||||||| |||||||    
T  6205628 agagaagagggcccgactcggaaccaaaaaatgaggtattttaaaatacctctctgccgaattttttattgaaatgtcagagactgatcaaggtcaaa 6205725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 6197803 - 6197874
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    ||||| ||||||||||||||||||||| || ||| ||||| ||||||| ||||| ||||||||| |||||||    
T  6197803 aaaaatgaggtattttaaaatacctctctgccgaattttttattgaaatgtcagagactgatcaaggtcaaa 6197874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 18098505 - 18098406
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgttagt 241  Q
    |||||||||| | ||||| ||||||||||||||||||||  ||||| |||||| || |||||| |||| ||  |||||| ||||| ||||||||||||||    
T  18098505 ccgactcggaataaaaaatgaggtattttaaaatacctccatgtcgaatttttccactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagt 18098406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 44832491 - 44832586
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| | ||||| |||||||||||||||||||| ||| || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  44832491 ccgactcggaataaaaaatgaggtattttaaaatacctccttgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 44832586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 13450175 - 13450125
Alignment:
Q  132 agagaagag-gcccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  13450175 agagaagagagcccgactcggaatcaaaaatgaggtattttaaaatacctc 13450125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 16366184 - 16366078
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    |||||||||| |||||||| ||   ||||| ||||||||||||||||||| |||| |||  |||||| ||||||||| | ||||||||| ||| ||| ||    
T  16366184 agagaagagggcccgactcagaacaaaaaatgaggtattttaaaatacctttttgccgaaattttcaatgaaaagtctgagactgatcaaggttaaacga 16366085  T
Q  231 catgtgt 237  Q
    || ||||    
T  16366084 cacgtgt 16366078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 1955946 - 1955905
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctcttt 184  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  1955946 ccgactcggaatcaaaaatgaggtattttaaaatacctcttt 1955905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 13185892 - 13185818
Alignment:
Q  162 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||||||||| |||| || ||| |||| ||||||||| |||| || |||||||||| ||| |||||||||    
T  13185892 gaggtattttaaaatatctctctgccgaatttt-cattgaaaaatcagagattgatcagggttaaacgacatgtgt 13185818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 1961766 - 1961724
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttg 185  Q
    |||||||||| | ||||| ||||||||||||||||||||||||    
T  1961766 ccgactcggaataaaaaatgaggtattttaaaatacctctttg 1961724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 16884633 - 16884567
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    |||| ||||||||||||||||| | |||| ||| ||||||| |||||| ||| ||| ||||||||||    
T  16884633 aaaatgaggtattttaaaatacttttttgccgaatttttcactgaaaaatcatggattgatcagggt 16884567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 20429481 - 20429431
Alignment:
Q  145 gactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||||| ||||||| ||||||||||||||||||||  || |||||||||    
T  20429481 gactcggaatcaaaaatgaggtattttaaaatacctccctgccgatttttt 20429431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 49932723 - 49932677
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcga 189  Q
    |||||||||| ||||  | ||||||||||||||||||||||||||||    
T  49932723 ccgactcggaatcaattatgaggtattttaaaatacctctttgtcga 49932677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 47108505 - 47108408
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| | ||||| |||||||||||||||||||   ||  || ||||| | |||||| |||| ||  |||||| ||||| ||||||||||    
T  47108505 ggcccgactcggaataaaaaatgaggtattttaaaataccttcctgcggaattttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 47108408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 337 - 401
Target Start/End: Complemental strand, 17852703 - 17852639
Alignment:
Q  337 agaaatgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggaccccctt 401  Q
    ||||| |||| ||||| |||| |||| ||||||||||||||||| |||||| |||| || |||||    
T  17852703 agaaaagtggtacattatgttttgatatgaccatatccttcacactcatgacattgaacaccctt 17852639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 6e-26; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 15567761 - 15567864
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaag-gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatg 229  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||    
T  15567761 agagaagagggcccgactctgattcaaaaaatgaggtattttaaaatacctccctgccgatttt-tcattgaaaagtcagggactgatcagggtcaaatg 15567859  T
Q  230 acatg 234  Q
    |||||    
T  15567860 acatg 15567864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 15580406 - 15580509
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaag-gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatg 229  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||    
T  15580406 agagaagagggcccgactctgattcaaaaaatgaggtattttaaaatacctccctgccgatttt-tcattgaaaagtcagggactgatcagggtcaaatg 15580504  T
Q  230 acatg 234  Q
    |||||    
T  15580505 acatg 15580509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 20548510 - 20548416
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| | ||||| ||||||||||||||||||||  |||||| ||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  20548510 ccgactcggaataaaaaatgaggtattttaaaatacctccctgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 20548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 25984497 - 25984432
Alignment:
Q  144 cgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcag 209  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  25984497 cgactcggaatcaaacatgaggtattttaaaatacctctttgtcgaatttttcactgaaaaatcag 25984432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 3439731 - 3439664
Alignment:
Q  165 gtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatg 234  Q
    |||||||||||||||||  |||||  ||||  |||||||||||||||||||||||| |||||||||||||    
T  3439731 gtattttaaaatacctcactgtcggatttt--attgaaaagtcagggactgatcagtgtcaaatgacatg 3439664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 15701617 - 15701532
Alignment:
Q  302 accaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatga 387  Q
    |||| |||||| ||||  |||||||||||   |||||||||||||||||||| || || |||||  ||||||||||||||||||||    
T  15701617 accaggaaacagacaagtttttcttttgtttcttgagaaatgtggcacatttcgtcctaatgtgtacatatccttcacattcatga 15701532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 39534290 - 39534210
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||| ||||||||||||||||||||  || ||| ||||| | |||||| ||||||| ||||||| ||||||||||| ||||    
T  39534290 aaaatgaggtattttaaaatacctccctgccgaattttttactgaaaaatcagggattgatcagagtcaaatgacacgtgt 39534210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 19737944 - 19738039
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||||| | |||| |||| ||  |||||| ||||| ||||||||||    
T  19737944 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttcactaaaaattcagagatcgatcagagtcaagtgacatgtgt 19738039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 50187912 - 50187818
Alignment:
Q  145 gactcggattcaaaaaggaggtattttaaaatacctctttgtcga--ttttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||| | ||||| ||||||||||||||||||||  || |||  |||||||| |||||| |||| || ||||||| ||||| ||||||||||    
T  50187912 gactcggaataaaaaatgaggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagattgatcagagtcaagtgacatgtgt 50187818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 4619868 - 4619967
Alignment:
Q  139 aggcccgactcggattcaaaaag-gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||||  ||||||  ||||||||||||||||||||| || |||  |||||| |||||| |||| || |||||||||| |||  ||||||||    
T  4619868 aggcccgactcggaaccaaaaaatgaggtattttaaaatacctctctgccga-attttcactgaaaaatcagagattgatcagggttaaacaacatgtgt 4619966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 4889 - 4803
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaa 226  Q
    ||||||||||||||||||||| ||||||||||||||| |||   || ||||||||| ||||||||||||||||||||||||||||||    
T  4889 ggcccgactcggattcaaaaatgaggtattttaaaatgccttcctgccgatttttttattgaaaagtcagggactgatcagggtcaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 24487866 - 24487943
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatg 234  Q
    |||| ||||||||||||||||||||  || ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  24487866 aaaatgaggtattttaaaatacctcactgccgatttttttattgaaaagtcagggactgattagggtcaaatgacatg 24487943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 24655275 - 24655366
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgaca 232  Q
    ||||||||||||||||||||| ||| |||||| |||||||||| || ||| ||||||| ||||||| ||||||||||||||| ||||| ||||    
T  24655275 ggcccgactcggattcaaaaatgag-tatttttaaatacctctctgccgaatttttcactgaaaagacagggactgatcaggatcaaacgaca 24655366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 6030961 - 6030886
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatg 234  Q
    |||| ||||||||||||||||||||  || |||   |||||||||||| |||||||||||||||||||||||||||||    
T  6030961 aaaatgaggtattttaaaatacctccctgccga--atttcattgaaaaatcagggactgatcagggtcaaatgacatg 6030886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 22162922 - 22163017
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  22162922 ccgactcggaatcaaaaatgaggtattttaaaatacctccatgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 22163017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 15061268 - 15061332
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaa 204  Q
    ||||||||||||| | ||||| ||||||||||||||||||||  || ||| ||||||||||||||    
T  15061268 ggcccgactcggaataaaaaatgaggtattttaaaatacctccctgccgaatttttcattgaaaa 15061332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 14891796 - 14891892
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||||||  |||||| ||||||||||||||||||||  || ||| ||||| | |||||| |||| ||  |||||| ||||| ||||||||||    
T  14891796 ggcccgactcggagccaaaaatgaggtattttaaaatacctccctgccgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgt 14891892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 27808506 - 27808602
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||||||| |||||||||||  |||||| ||||| | |||||||| | || || ||| |||||||  |||||||||| |||||||||||| ||||    
T  27808506 agagaagaggacccgactcggaaccaaaaatgaggtgtattaaaatatccctctgccgaatttttcaccgaaaagtcagagactgatcagggccaaa 27808602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 22156921 - 22156959
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  22156921 ccgactcggaatcaaaaatgaggtattttaaaatacctc 22156959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 13385799 - 13385746
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcag 209  Q
    ||||| ||||||||||||| ||| |||||||||| ||||||  |||||||||||    
T  13385799 aaaaatgaggtattttaaagtacttctttgtcgaatttttctctgaaaagtcag 13385746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 31999893 - 31999841
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||  ||||||||    
T  31999893 ccgactcggaataaaaaatgaggtattttaaaatacctctctgcagatttttt 31999841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 9197 - 9299
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| |||||   |   |||||| |||||||||||| |||||||||||||||||||||||    
T  9197 agagaagagggcccgactcggattcaaaaatgaggtattttaaagtaccttcatagagatttt-tcattgaaaagttagggactgatcagggtcaaatga 9295  T
Q  231 catg 234  Q
    ||||    
T  9296 catg 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 23712 - 23618
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| | ||||| ||||||||||||||||||||  |||||| |||||||||||||| |||| ||  |||||| ||||| ||||||||||    
T  23712 ccgactcggaataaaaaatgaggtattttaaaatacctccctgtcgaatttttcattgaaaaatcagagatcgatcagagtcaagtgacatgtgt 23618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 21064799 - 21064724
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatg 234  Q
    |||| |||||||||| |||||||||  |||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  21064799 aaaacgaggtatttttaaatacctcactgtcgaatttt--attgaaaagtcagggactgatcagggtcaaatgacatg 21064724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 12370403 - 12370484
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||| ||||||||||||||||||| |||| ||| ||||| | |||||| ||||||| ||||||| ||||||||||| ||||    
T  12370403 aaaaatgaggtattttaaaatacctttttgccgaattttttactgaaaaatcagggattgatcagagtcaaatgacacgtgt 12370484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 27109856 - 27109977
Alignment:
Q  297 atcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggacc 396  Q
    ||||||||| ||||||| ||| ||||| || | ||  |||| ||||| |||||||| |||| | |||||||||||||| |||||||||||| |||||||     
T  27109856 atcagaccacgaaacaaccaagcttttattgtctc--ttgaaaaatgcggcacattctgtttttatgtgaccatatccatcacattcatgacattggact 27109953  T
Q  397 ccctttgattgagtgctcttttca 420  Q
     ||||  ||||| |||||||||||    
T  27109954 gccttgaattgattgctcttttca 27109977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 18224 - 18317
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgt 235  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||    
T  18224 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgt 18317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 21068372 - 21068302
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||| ||||||||||||||||||| | ||  || ||||||| |||||| ||||||| ||||||||||||||    
T  21068372 aaaatgaggtattttaaaatacctttctgctgaatttttcactgaaaaatcagggattgatcagggtcaaa 21068302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 20279266 - 20279362
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| ||||||  ||||||||||||||||||||| || |||   ||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  20279266 ggcccgactcggaatcaaaattgaggtattttaaaatacctctctgccga-aatttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 20279362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 19884359 - 19884406
Alignment:
Q  162 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcag 209  Q
    ||||||||||||||||||| | ||||||||||||  ||||||||||||    
T  19884359 gaggtattttaaaatacctttctgtcgattttttttttgaaaagtcag 19884406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 36735463 - 36735368
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||| | |||||| |||| ||  |||||| ||| | ||||||||||    
T  36735463 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatggatcagagtcgagtgacatgtgt 36735368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 401
Target Start/End: Original strand, 21529173 - 21529259
Alignment:
Q  315 caaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggaccccctt 401  Q
    |||| |||| ||||||| ||| ||||| ||  || ||| |||||| || |||||||||||||||||||||||| |||| || |||||    
T  21529173 caaaattttattttgtcttttaagaaaagtatcatattctgttctaatatgaccatatccttcacattcatgacattgaacaccctt 21529259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 21755754 - 21755804
Alignment:
Q  132 agagaagag-gcccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    ||||||||| |||||||||||| ||||| | ||||||||||||||||||||    
T  21755754 agagaagagagcccgactcggaatcaaacatgaggtattttaaaatacctc 21755804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 45489255 - 45489360
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    |||||||||| ||||||||||| |||||| | |||||||| ||||||||||| || |||  |||||| ||||||||  | ||| || |||||| ||||||    
T  45489255 agagaagagggcccgactcggaatcaaaatg-aggtatttcaaaatacctctctgccgaaattttcactgaaaagttggagaccgaacagggttaaatga 45489353  T
Q  231 catgtgt 237  Q
    | |||||    
T  45489354 cgtgtgt 45489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 15814260 - 15814361
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgtta 239  Q
    |||||||||||||  |||| | |||||||||||||||||||||||  | | ||||| | |||||| |||| ||  |||||| |||||| |||  ||||||    
T  15814260 ggcccgactcggaaccaaatatgaggtattttaaaatacctctttaactaattttttactgaaaaatcagagatcgatcagagtcaaacgacgcgtgtta 15814359  T
Q  240 gt 241  Q
    ||    
T  15814360 gt 15814361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 11873814 - 11873762
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||||||| | ||||| ||||||||||||||||||||  |||||| |||||    
T  11873814 ccgactcggaatgaaaaatgaggtattttaaaatacctccctgtcgaattttt 11873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 22518913 - 22518993
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||| ||||||||||||||||||||| | |||| ||||||| | |||| |||  || |||||||||| ||| |||| ||||    
T  22518913 aaaacgaggtattttaaaatacctctctatcgagtttttcacttaaaaatcatagattgatcagggttaaacgacacgtgt 22518993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 41829339 - 41829407
Alignment:
Q  162 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    ||||||||||||||||||||| ||  || ||||||||| |||| | || || |||||||| ||||||||    
T  41829339 gaggtattttaaaatacctctctgctgaatttttcattaaaaaattagagattgatcaggttcaaatga 41829407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 21961720 - 21961638
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgttagt 241  Q
    |||| ||||||||||||||||||||  |||||  ||||  |||||||||||||||||||||||| ||||||||||||| ||||||    
T  21961720 aaaatgaggtattttaaaatacctcactgtcggatttt--attgaaaagtcagggactgatcagtgtcaaatgacatgcgttagt 21961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 22631803 - 22631732
Alignment:
Q  162 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatg 234  Q
    ||||||||| ||||||||||  || |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  22631803 gaggtatttcaaaatacctccctggcgattttt-cattgataagtcagggactgatcagggtcaaatgacatg 22631732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 19076371 - 19076451
Alignment:
Q  307 gaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatga 387  Q
    ||||||| ||| ||||||||||||   || ||||| |||| ||||||||| || | |||||||||||||||||||||||||    
T  19076371 gaaacaatcaagcttttcttttgtttcttaagaaaagtggtacattttgtcctaaggtgaccatatccttcacattcatga 19076451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 25803393 - 25803489
Alignment:
Q  290 catcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatg 386  Q
    |||||||||||||||| |||||||  || |||||||| |||   || || || || ||||||| ||| ||||| |||||||||||||||||||||||    
T  25803393 catcatcatcagaccaggaaacaattaagcttttcttctgtttctttagtaaagtagcacattctgtcctgatatgaccatatccttcacattcatg 25803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 20050925 - 20051000
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgaca 232  Q
    |||| ||||||||||||||||||||| || ||| | |||||||||||| ||| ||| |||||||||| ||| ||||    
T  20050925 aaaatgaggtattttaaaatacctctctgccgaatctttcattgaaaaatcaaggattgatcagggttaaacgaca 20051000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 20058788 - 20058863
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgaca 232  Q
    |||| ||||||||||||||||||||| || ||| | |||||||||||| ||| ||| |||||||||| ||| ||||    
T  20058788 aaaatgaggtattttaaaatacctctctgccgaatctttcattgaaaaatcaaggattgatcagggttaaacgaca 20058863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 12667472 - 12667568
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg--attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || ||  | ||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  12667472 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 12667568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 1625037 - 1624973
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||||||| ||||||||||| ||||| | ||||||||||||||||||||  |||||| |||||    
T  1625037 agagaagagggcccgactcggaatcaaatatgaggtattttaaaatacctccatgtcgaattttt 1624973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 482
Target Start/End: Complemental strand, 12386447 - 12386319
Alignment:
Q  359 tgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatcagttcttacattcttcacatttctaggtt-----ct 453  Q
    ||||||| ||| | |||| ||||||| || ||||||| ||||| |||||||||  ||||| ||||||||||| ||| ||||||| |  | |||     ||    
T  12386447 tgatgtgtccaaaccctttacattcaagacattggactcccttagattgagtgtccttttgatcagttcttatatttttcacatattcaagttgattgct 12386348  T
Q  454 gatgttggacctgatgttctgaacatttg 482  Q
     |||||||||||||||||||||| |||||    
T  12386347 aatgttggacctgatgttctgaatatttg 12386319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 19169221 - 19169141
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||| ||||||||| ||||||||||| || ||| ||||||| ||||||| ||| ||||||| ||||| ||| ||| |||||    
T  19169221 aaaatgaggtatttcaaaatacctctctgccgaatttttcactgaaaagacagagactgattagggttaaacgacgtgtgt 19169141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 22764825 - 22764916
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgaca 232  Q
    ||||||||||| | ||||||  ||||||||||||||||||||| || |||  ||||||||||||| |||| ||  |||||| ||||| |||||    
T  22764825 ggcccgactcgaaatcaaaattgaggtattttaaaatacctctctgccga-attttcattgaaaaatcagagatcgatcagagtcaagtgaca 22764916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 28269591 - 28269639
Alignment:
Q  132 agagaagaggcccgactcggattcaaaaaggaggtattttaaaatacct 180  Q
    ||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  28269591 agagaagagacccgactcggaatcaaatatgaggtattttaaaatacct 28269639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 28348341 - 28348389
Alignment:
Q  132 agagaagaggcccgactcggattcaaaaaggaggtattttaaaatacct 180  Q
    ||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  28348341 agagaagagacccgactcggaatcaaatatgaggtattttaaaatacct 28348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 28702819 - 28702918
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg--attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||  || ||  | ||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  28702819 ggcccgaatcggaatcaaaaatgaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 28702918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 22599654 - 22599709
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||| |||||||| ||||| | |||||||||||||||||||| ||||||| |||||    
T  22599654 ggcctgactcggaatcaaatatgaggtattttaaaatacctcattgtcgaattttt 22599709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 25711895 - 25711845
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    |||||||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  25711895 agagaagagggcccgactcggaatcaaaaatgagatattttaaaatacctc 25711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 27616579 - 27616530
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacct 180  Q
    |||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  27616579 agagaagaggacccgactcggaatcaaatatgaggtattttaaaatacct 27616530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 7245433 - 7245477
Alignment:
Q  165 gtattttaaaatacctctttgtcgattttttcattgaaaagtcag 209  Q
    |||||||||||||||||  |||||| ||||||| |||||||||||    
T  7245433 gtattttaaaatacctccctgtcgaatttttcactgaaaagtcag 7245477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 14779901 - 14779953
Alignment:
Q  155 caaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtc 207  Q
    |||||| ||||||||||||||||||||| || ||| ||||| | |||||||||    
T  14779901 caaaaatgaggtattttaaaatacctctctgccgaattttttactgaaaagtc 14779953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 22069237 - 22069301
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt 195  Q
    |||||||||| ||||||||||| ||||  | ||||||||||||||||||||  |||||| |||||    
T  22069237 agagaagagggcccgactcggaatcaactatgaggtattttaaaatacctccctgtcgaattttt 22069301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 4966 - 5062
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||||||| |||||||||||   ||||| || |||||||||||||||||| || ||| ||||||||||||| ||||| ||||||||| |||||||    
T  4966 agagaagagggcccgactcggaacaaaaaatgaagtattttaaaatacctctctgccgaatttttcattgaaatgtcagagactgatcaaggtcaaa 5062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 2584 - 2509
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatg 234  Q
    |||| |||||||||| |||||||||  |||||| ||||  ||| ||||||||||||||||||||||||||||||||||    
T  2584 aaaacgaggtatttttaaatacctcactgtcgaatttt--attaaaaagtcagggactgatcagggtcaaatgacatg 2509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 22704612 - 22704531
Alignment:
Q  145 gactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    ||||||||  |||||| ||||||||||||||||||||| ||||||  |||||| ||||||||||| |||||||||||| ||||    
T  22704612 gactcggaaccaaaaatgaggtattttaaaatacctctctgtcga-attttcactgaaaagtcagagactgatcagggccaaa 22704531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 40015008 - 40014911
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  || ||  ||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  40015008 ggcccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgcatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 40014911  T

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Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 241
Target Start/End: Original strand, 20099585 - 20099684
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgttagt 241  Q
    |||||||||| ||||||| ||| ||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||||||    
T  20099585 ccgactcggaatcaaaaatgagttattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagt 20099684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 36454757 - 36454662
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| ||||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  36454757 ccgactcggaatcaaaaatgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 36454662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 15956913 - 15957012
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcga--ttttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| ||||||| | ||||||||||||||||||  || |||  |||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  15956913 ggcccgactcggaatcaaaaatggggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 15957012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 36448379 - 36448284
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||||| |||||||  |||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  36448379 ccgactcggaatcaaaaataaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 36448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 22406085 - 22406039
Alignment:
Q  346 gcacattttgttctgatgtgaccatatccttcacattcatgatattg 392  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  22406085 gcacattctgttctgatatgaccatatccttcacattcatgacattg 22406039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 17917513 - 17917424
Alignment:
Q  334 ttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggaccccctttgattgagtgctcttttcatca 423  Q
    |||||||| || |||||||  ||||||||||| ||||| ||||||||||||||| |||| || || ||  ||||| || |||||||||||    
T  17917513 ttgagaaaagtagcacattcagttctgatgtgtccataaccttcacattcatgacattgaacacctttgtattgattgttcttttcatca 17917424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 37048475 - 37048379
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| | ||||| ||||||||||||||||||||| || |||  |||||| |||||| |||| ||  |||||| ||||| ||||| ||||    
T  37048475 ggcccgactcggaataaaaaatgaggtattttaaaatacctctctgccga-attttcactgaaaaatcagagatcgatcagagtcaagtgacacgtgt 37048379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 20092688 - 20092783
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    |||||||| | | ||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  20092688 ccgactcgaaataaaaaatgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgt 20092783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 13358554 - 13358500
Alignment:
Q  155 caaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcag 209  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||  |||||||||||    
T  13358554 caaaaatgaggtattttaaagtacctctctgtcgaatttttctgtgaaaagtcag 13358500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 38227823 - 38227877
Alignment:
Q  155 caaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcag 209  Q
    |||||| ||||||||||||| ||||||| || ||| ||||||| |||||||||||    
T  38227823 caaaaatgaggtattttaaagtacctctctgccgaatttttcactgaaaagtcag 38227877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 18955255 - 18955183
Alignment:
Q  132 agagaagaggcccgactcggattcaaaaag-gaggtattttaaaatacctctttgtcgattttttcattgaaa 203  Q
    ||||||||||||||| |||||  ||||||  |||||||||||||||| |||| || ||| |||||| ||||||    
T  18955255 agagaagaggcccgattcggaaccaaaaaatgaggtattttaaaatatctctctgccgaatttttctttgaaa 18955183  T

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Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 41215 - 41281
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    |||| ||||||||||||||||||||| |||||| ||||||| |||||| |||| || ||||||||||    
T  41215 aaaatgaggtattttaaaatacctctctgtcgaatttttcactgaaaaatcagagattgatcagggt 41281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 51480 - 51376
Alignment:
Q  282 ttcagagtcatcatcatcagaccaagaaacaaacaaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacat 381  Q
    |||||| ||||||||||| |||||  |||||   ||||||||||| |||   || |||||||| ||||||| ||||||||| || ||||| |||||||||    
T  51480 ttcagaatcatcatcatctgaccagaaaacagttaaacttttcttctgtttctttagaaatgttgcacattctgttctgatatgcccatacccttcacat 51381  T
Q  382 tcatg 386  Q
    |||||    
T  51380 tcatg 51376  T

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Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 16472 - 16554
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    ||||||| ||||| |||||| | |||||||||||||||||||  || ||| |||||||||||||| |||| || ||||||||||    
T  16472 ggcccgattcggaatcaaaatg-aggtattttaaaatacctccctgccgaatttttcattgaaaaatcagagattgatcagggt 16554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 44542 - 44612
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    ||||| ||||||||||||||||||||| ||||||  |||||||||||||||||  |||| |||| |||||||    
T  44542 aaaaatgaggtattttaaaatacctctctgtcga-attttcattgaaaagtcaaagactaatcaaggtcaaa 44612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 885 - 819
Alignment:
Q  157 aaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    |||| ||||||||||||||||||||  || ||| |||||||||||||| |||| || ||||||||||    
T  885 aaaatgaggtattttaaaatacctccctgccgaatttttcattgaaaaatcagagattgatcagggt 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 111610 - 111536
Alignment:
Q  318 acttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatgatattg 392  Q
    |||||||||||||   || ||||| || ||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  111610 acttttcttttgtttcttcagaaaagtagcacattttgtactgatatggccatatccttcacattcatgacattg 111536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 8111 - 8015
Alignment:
Q  140 ggcccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||||||| ||||| | ||||||||||||||||||||  || ||| ||||| | |||||| |||| ||  |||||| ||||| ||||||||||    
T  8111 ggcccgactcggaatcaaagatgaggtattttaaaatacctccctgccgaattttt-actgaaaaatcagagatcgatcagagtcaagtgacatgtgt 8015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 362779 - 362880
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatga 230  Q
    |||||||||| |||||||||||   ||||| |||||| |||||||||||||| || ||| ||||||| ||||||||| | || || || |||||||| ||    
T  362779 agagaagagggcccgactcggaacaaaaaatgaggtagtttaaaatacctctctgccgaatttttcactgaaaagtctgagattggtcggggtcaaacga 362878  T
Q  231 ca 232  Q
    ||    
T  362879 ca 362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 65957 - 65873
Alignment:
Q  154 tcaaaaaggaggtattttaaaatacctctttgtcg-attttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||| ||||||||||||||||||||  || || ||||||||| |||||| |||| ||  |||||| ||||| ||||||||||    
T  65957 tcaaaaatgaggtattttaaaatacctccctgccgaattttttcaatgaaaaatcagagatcgatcagagtcaagtgacatgtgt 65873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1890 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1890
Description:

Target: scaffold1890; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 884 - 970
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgatttttt--cattgaaaagtcagggactgatcagggtcaaa 227  Q
    ||||||||||   ||||| ||||||| ||||||||||||| || ||| |||||  |||||||||||||| | |||||||||| ||||    
T  884 ccgactcggaacaaaaaatgaggtatattaaaatacctctctgccgaattttttccattgaaaagtcagaggctgatcagggccaaa 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 17669 - 17739
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    ||||| ||||||||||||||||||||| || |||  ||||||  |||| ||||| |||||||||||||||||    
T  17669 aaaaatgaggtattttaaaatacctctctgccga-attttcaccgaaatgtcagagactgatcagggtcaaa 17739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 9017 - 9067
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctc 181  Q
    |||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  9017 agagaagagggcccgactcggaatcaaatatgaggtattttaaaatacctc 9067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 8278 - 8220
Alignment:
Q  132 agagaagaggcc-cgactcggattcaaaaaggaggtattttaaaatacctctttgtcga 189  Q
    |||||||||| | |||||||||  |||| | ||||||||||||||||||||||||||||    
T  8278 agagaagagggctcgactcggaaccaaatatgaggtattttaaaatacctctttgtcga 8220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 9113 - 9193
Alignment:
Q  156 aaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||| ||||||||||||||||||||  || ||| ||||| |||||||| |||| ||  |||||| ||||| ||||||||||    
T  9113 aaaaatgaggtattttaaaatacctccctgccgaattttt-attgaaaaatcagagatcgatcagagtcaagtgacatgtgt 9193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 12390 - 12329
Alignment:
Q  334 ttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcatgatattggac 395  Q
    |||||||| || |||||||  ||||| ||||| ||||| ||||||||||||||| |||||||    
T  12390 ttgagaaaagtagcacattcagttcttatgtgtccataaccttcacattcatgacattggac 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 8883 - 8814
Alignment:
Q  316 aaacttttcttttgtcctttgagaaatgtggcacattttgttctgatgtgaccatatccttcacattcat 385  Q
    ||||||||||| |||   || ||||| || ||||||| ||||||||| || |||||||||||||||||||    
T  8883 aaacttttcttctgtttctttagaaaagtagcacattctgttctgatatggccatatccttcacattcat 8814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 29068 - 29129
Alignment:
Q  162 gaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggt 223  Q
    ||||||||| ||||||||||| || ||| ||||||| |||||| |||| || ||||||||||    
T  29068 gaggtatttcaaaatacctctctgccgaatttttcactgaaaaatcagagattgatcagggt 29129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 58607 - 58699
Alignment:
Q  144 cgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaatgacatgtgt 237  Q
    ||||||||| ||||| | ||||||||||||||||||||| | |||| |||||  |||||||| | | ||| |||| |||| |||||||| ||||    
T  58607 cgactcggaatcaaatatgaggtattttaaaatacctctctatcgaattttt-tttgaaaaggctgagaccgatcggggttaaatgacacgtgt 58699  T

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Target: scaffold0540 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 2844 - 2880
Alignment:
Q  143 ccgactcggattcaaaaaggaggtattttaaaatacc 179  Q
    ||||||||||||||| || ||||||||||||||||||    
T  2844 ccgactcggattcaataatgaggtattttaaaatacc 2880  T

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Target: scaffold0420 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 11041 - 10953
Alignment:
Q  132 agagaagagg-cccgactcggattcaaaaaggaggtattttaaaatacctctttgtcgattttttcattgaaaagtcagggactgatca 219  Q
    |||||||||| |||||||||||  |||||| ||||| | |||||||| | || || ||| |||||||  |||||||||| |||||||||    
T  11041 agagaagaggacccgactcggaaccaaaaatgaggtgtattaaaatatccctctgccgaatttttcaccgaaaagtcagagactgatca 10953  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 106436 - 106488
Alignment:
Q  175 atacctctttgtcgattttttcattgaaaagtcagggactgatcagggtcaaa 227  Q
    |||||||| || ||| ||||||| ||||||||||| |||||||||||| ||||    
T  106436 atacctctctgccgaatttttcactgaaaagtcagagactgatcagggccaaa 106488  T

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