View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15803_high_6 (Length: 275)
Name: NF15803_high_6
Description: NF15803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15803_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 30 - 256
Target Start/End: Complemental strand, 24599209 - 24598983
Alignment:
| Q |
30 |
ggtgtgggtgttgtacttaacgaagattagagagcatcgtgaacaacgaacaaataatcaaaacacttacgagtcatagcattacacctccatctataat |
129 |
Q |
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| T |
24599209 |
ggtgtgggtgttgtactcaacgaagattagagagtatcgtgaacatcgaacaaataatcaaaacacttaagagtcatagcattacacctccatctaaaat |
24599110 |
T |
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| Q |
130 |
cttacaacattaaatatatgaatcatatacggtaagannnnnnnnagagaatattttaagacttatacatcatttaatttatttggccaatttttatcga |
229 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | |
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| T |
24599109 |
cttacaacattaaatatatgaatcatatacggtaagatattttttagagaatattttaagagttatacatcatttaatttatttggccaatttttatcta |
24599010 |
T |
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| Q |
230 |
atgtggactaatcactcccgctcgaat |
256 |
Q |
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||||||||||| ||||||||||||||| |
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| T |
24599009 |
atgtggactaaccactcccgctcgaat |
24598983 |
T |
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