View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15803_high_8 (Length: 223)
Name: NF15803_high_8
Description: NF15803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15803_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 46453638 - 46453722
Alignment:
| Q |
14 |
aaaatactccattgagaatgaatgataatacaaaatgatagttaaaaaattgacgcatgtaaactaaatttaacgacataaattg |
98 |
Q |
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| T |
46453638 |
aaaatactccattgagaatgaatgataatacaaaatgatagttaaaaaattgacgcatgtaaactaaatttaacgacataaattg |
46453722 |
T |
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Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 46453760 - 46453830
Alignment:
| Q |
136 |
ggaggaagtaatcattatcaaagaataattgctagttccaatgagatcgacaaaatacaatcagcaaaaca |
206 |
Q |
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| T |
46453760 |
ggaggaagtaatcattatcaaagaataattgctagttccaatgagatcgacaaaatacattcagcaaaaca |
46453830 |
T |
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