View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15803_low_5 (Length: 357)

Name: NF15803_low_5
Description: NF15803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15803_low_5
NF15803_low_5
[»] chr1 (27 HSPs)
chr1 (185-340)||(10479627-10479790)
chr1 (9-83)||(40214979-40215053)
chr1 (9-74)||(18404442-18404507)
chr1 (9-74)||(25463676-25463741)
chr1 (9-71)||(3559620-3559682)
chr1 (9-75)||(9910293-9910359)
chr1 (9-70)||(16045798-16045859)
chr1 (9-74)||(41876442-41876507)
chr1 (9-74)||(44094698-44094763)
chr1 (9-76)||(37821834-37821901)
chr1 (75-144)||(10479549-10479621)
chr1 (9-75)||(36966708-36966774)
chr1 (9-74)||(19015404-19015469)
chr1 (9-75)||(6883486-6883552)
chr1 (11-75)||(32000269-32000333)
chr1 (9-74)||(25973414-25973478)
chr1 (9-80)||(34519752-34519823)
chr1 (21-74)||(40273702-40273755)
chr1 (9-74)||(27523255-27523322)
chr1 (9-70)||(41876241-41876301)
chr1 (37-74)||(51620980-51621017)
chr1 (10-77)||(44691030-44691097)
chr1 (37-76)||(52329317-52329356)
chr1 (9-70)||(18404654-18404714)
chr1 (9-70)||(19015610-19015670)
chr1 (9-62)||(44690828-44690881)
chr1 (9-70)||(51737711-51737771)
[»] chr8 (38 HSPs)
chr8 (9-75)||(32393857-32393923)
chr8 (9-75)||(35353040-35353106)
chr8 (9-74)||(1645965-1646030)
chr8 (9-74)||(32064745-32064810)
chr8 (9-74)||(34665382-34665447)
chr8 (9-73)||(14128865-14128929)
chr8 (9-74)||(17841850-17841915)
chr8 (9-74)||(20091801-20091866)
chr8 (9-74)||(24211553-24211618)
chr8 (9-78)||(37132658-37132727)
chr8 (9-70)||(37986055-37986116)
chr8 (9-74)||(40780129-40780194)
chr8 (9-74)||(42755042-42755107)
chr8 (10-74)||(15187560-15187624)
chr8 (9-74)||(6108233-6108298)
chr8 (9-74)||(26042116-26042181)
chr8 (9-66)||(38016979-38017036)
chr8 (9-74)||(31347782-31347847)
chr8 (9-74)||(39772801-39772866)
chr8 (9-74)||(41819778-41819843)
chr8 (21-71)||(8453837-8453887)
chr8 (9-74)||(7017865-7017930)
chr8 (9-73)||(27782117-27782181)
chr8 (9-74)||(30835047-30835111)
chr8 (9-69)||(25581239-25581299)
chr8 (9-64)||(7021988-7022043)
chr8 (21-76)||(27835465-27835520)
chr8 (9-70)||(3890413-3890474)
chr8 (33-76)||(30055541-30055584)
chr8 (9-70)||(1503642-1503702)
chr8 (9-70)||(3596840-3596900)
chr8 (9-70)||(17841649-17841709)
chr8 (21-70)||(24844870-24844919)
chr8 (9-70)||(25581038-25581098)
chr8 (9-70)||(26041912-26041972)
chr8 (21-70)||(32064964-32065012)
chr8 (9-70)||(40779928-40779988)
chr8 (21-70)||(42754841-42754889)
[»] chr5 (26 HSPs)
chr5 (9-75)||(11361131-11361197)
chr5 (9-74)||(2477636-2477701)
chr5 (9-75)||(33584329-33584395)
chr5 (9-74)||(4892202-4892267)
chr5 (9-74)||(25398238-25398303)
chr5 (9-74)||(37321793-37321859)
chr5 (9-74)||(6043511-6043576)
chr5 (11-74)||(3362778-3362841)
chr5 (11-74)||(38899728-38899791)
chr5 (11-77)||(12850798-12850864)
chr5 (9-75)||(22913054-22913120)
chr5 (9-70)||(8145379-8145440)
chr5 (9-74)||(14138668-14138733)
chr5 (9-75)||(3522006-3522072)
chr5 (9-75)||(4434007-4434073)
chr5 (9-75)||(17545685-17545751)
chr5 (21-74)||(12614745-12614798)
chr5 (9-70)||(3521806-3521866)
chr5 (9-70)||(6043311-6043371)
chr5 (9-62)||(10458409-10458462)
chr5 (21-70)||(27481830-27481879)
chr5 (21-70)||(3362997-3363045)
chr5 (9-70)||(4892408-4892468)
chr5 (9-70)||(12614536-12614597)
chr5 (37-74)||(13664642-13664679)
chr5 (9-70)||(33584128-33584188)
[»] chr3 (35 HSPs)
chr3 (9-75)||(37217053-37217119)
chr3 (9-74)||(2754717-2754782)
chr3 (9-74)||(3574527-3574592)
chr3 (10-74)||(11347268-11347332)
chr3 (9-75)||(3456063-3456129)
chr3 (9-75)||(48160904-48160970)
chr3 (9-75)||(6041883-6041949)
chr3 (9-74)||(19650900-19650965)
chr3 (21-74)||(42297353-42297406)
chr3 (9-80)||(8320584-8320655)
chr3 (9-75)||(30385010-30385076)
chr3 (9-75)||(33145712-33145777)
chr3 (9-74)||(3137414-3137479)
chr3 (9-74)||(22426344-22426409)
chr3 (9-74)||(33113793-33113858)
chr3 (9-74)||(37522053-37522118)
chr3 (9-74)||(34482910-34482975)
chr3 (9-74)||(36865027-36865092)
chr3 (9-73)||(9797029-9797093)
chr3 (21-63)||(42921154-42921196)
chr3 (9-74)||(33839531-33839596)
chr3 (9-75)||(8362045-8362111)
chr3 (36-74)||(24343547-24343585)
chr3 (37-71)||(40327878-40327912)
chr3 (9-70)||(37522259-37522319)
chr3 (21-74)||(41224233-41224286)
chr3 (10-62)||(47738117-47738169)
chr3 (11-74)||(26612785-26612848)
chr3 (43-74)||(47402630-47402661)
chr3 (9-70)||(3137213-3137273)
chr3 (9-70)||(34482687-34482747)
chr3 (21-70)||(40328049-40328098)
chr3 (21-70)||(42921343-42921392)
chr3 (9-62)||(47738317-47738370)
chr3 (21-65)||(33839753-33839797)
[»] chr6 (19 HSPs)
chr6 (9-74)||(6127275-6127340)
chr6 (9-74)||(23291084-23291149)
chr6 (9-76)||(17705465-17705532)
chr6 (9-74)||(33695327-33695392)
chr6 (9-74)||(33696696-33696761)
chr6 (9-74)||(18365573-18365638)
chr6 (9-74)||(18370837-18370902)
chr6 (9-75)||(17176021-17176087)
chr6 (9-74)||(6031741-6031806)
chr6 (9-74)||(25986930-25986995)
chr6 (21-74)||(28675148-28675201)
chr6 (10-74)||(18889698-18889761)
chr6 (9-71)||(8515725-8515787)
chr6 (10-70)||(29693652-29693712)
chr6 (9-68)||(11548588-11548647)
chr6 (9-74)||(2309423-2309488)
chr6 (9-63)||(32702216-32702270)
chr6 (9-74)||(9752245-9752309)
chr6 (9-70)||(33696903-33696963)
[»] chr2 (22 HSPs)
chr2 (9-74)||(35160757-35160822)
chr2 (9-73)||(10661888-10661952)
chr2 (9-75)||(21936080-21936146)
chr2 (9-74)||(9293576-9293641)
chr2 (9-74)||(23268062-23268127)
chr2 (9-74)||(33380207-33380272)
chr2 (10-74)||(13354846-13354910)
chr2 (9-71)||(31174834-31174896)
chr2 (21-74)||(7475520-7475573)
chr2 (9-74)||(14941366-14941431)
chr2 (9-74)||(43330912-43330977)
chr2 (9-72)||(21393688-21393751)
chr2 (9-74)||(9723405-9723470)
chr2 (9-46)||(3989104-3989141)
chr2 (9-70)||(23267861-23267921)
chr2 (9-74)||(27847632-27847697)
chr2 (37-76)||(40262714-40262753)
chr2 (9-62)||(9723612-9723665)
chr2 (9-62)||(22591494-22591547)
chr2 (21-70)||(22592930-22592979)
chr2 (9-70)||(33380413-33380473)
chr2 (9-70)||(35160965-35161025)
[»] chr7 (21 HSPs)
chr7 (11-75)||(24394971-24395035)
chr7 (9-76)||(3961977-3962044)
chr7 (9-75)||(4974735-4974801)
chr7 (9-75)||(34482834-34482900)
chr7 (9-74)||(15577850-15577915)
chr7 (9-74)||(42611811-42611876)
chr7 (9-74)||(45637712-45637777)
chr7 (9-76)||(48880927-48880994)
chr7 (9-74)||(15329273-15329338)
chr7 (9-74)||(25167850-25167915)
chr7 (9-74)||(37477080-37477145)
chr7 (9-75)||(20010098-20010163)
chr7 (10-76)||(36790467-36790533)
chr7 (9-74)||(18036978-18037043)
chr7 (9-74)||(35444558-35444623)
chr7 (9-70)||(29737143-29737204)
chr7 (9-74)||(42696083-42696148)
chr7 (9-75)||(15238381-15238447)
chr7 (9-46)||(30848597-30848634)
chr7 (9-70)||(25167655-25167715)
chr7 (9-70)||(48880726-48880786)
[»] chr4 (35 HSPs)
chr4 (9-73)||(7745112-7745176)
chr4 (9-75)||(22199260-22199326)
chr4 (9-75)||(49387888-49387954)
chr4 (9-74)||(10442789-10442854)
chr4 (9-74)||(31078819-31078884)
chr4 (11-74)||(36072947-36073010)
chr4 (9-75)||(2624836-2624902)
chr4 (9-74)||(21802322-21802387)
chr4 (9-74)||(23964465-23964530)
chr4 (9-74)||(24128239-24128304)
chr4 (9-74)||(33530688-33530753)
chr4 (9-74)||(47290066-47290131)
chr4 (9-74)||(50156578-50156643)
chr4 (11-74)||(4751446-4751509)
chr4 (9-74)||(24392667-24392732)
chr4 (9-70)||(36073354-36073415)
chr4 (9-74)||(44893426-44893491)
chr4 (9-75)||(46441843-46441909)
chr4 (9-74)||(53123030-53123096)
chr4 (9-68)||(42671675-42671734)
chr4 (12-74)||(37934944-37935006)
chr4 (9-74)||(44893213-44893279)
chr4 (9-62)||(37219837-37219890)
chr4 (9-70)||(24392880-24392940)
chr4 (9-70)||(25063373-25063434)
chr4 (9-70)||(44893012-44893072)
chr4 (9-70)||(44893632-44893692)
chr4 (9-46)||(9088898-9088935)
chr4 (9-70)||(9089076-9089136)
chr4 (21-70)||(17655648-17655697)
chr4 (21-70)||(24128457-24128505)
chr4 (9-70)||(36073555-36073615)
chr4 (9-70)||(46442050-46442110)
chr4 (9-70)||(53123237-53123297)
chr4 (21-61)||(36073755-36073795)
[»] scaffold0204 (2 HSPs)
scaffold0204 (9-74)||(4396-4461)
scaffold0204 (9-70)||(4602-4662)
[»] scaffold0665 (1 HSPs)
scaffold0665 (9-73)||(3069-3133)
[»] scaffold0178 (2 HSPs)
scaffold0178 (9-77)||(11618-11686)
scaffold0178 (9-62)||(11827-11879)
[»] scaffold0471 (2 HSPs)
scaffold0471 (9-74)||(12842-12907)
scaffold0471 (21-70)||(13060-13108)
[»] scaffold0096 (1 HSPs)
scaffold0096 (9-74)||(41011-41076)
[»] scaffold0085 (2 HSPs)
scaffold0085 (9-74)||(47850-47915)
scaffold0085 (9-70)||(48055-48115)
[»] scaffold0228 (5 HSPs)
scaffold0228 (9-63)||(8413-8467)
scaffold0228 (9-63)||(15995-16049)
scaffold0228 (9-63)||(25947-26001)
scaffold0228 (9-70)||(16190-16250)
scaffold0228 (9-70)||(26142-26202)


Alignment Details
Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 185 - 340
Target Start/End: Original strand, 10479627 - 10479790
Alignment:
Q  185 tttcccgaaaacttttgccacgacaagatcatgattgtagtttattaatgcatgcatttagccatttcaat--------ctttaaccatccatgttttcc 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  10479627 tttcccgaaaacttttgccacgacaagatcatgattgtagtttattaatgcatgcatttagccatttcaatctttaagactttaaccatccatgttttcc 10479726  T
Q  277 atttaatgaaaaatctaacggttgttaattagtcgtgataagtcggaacgttttttctcgctgt 340  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10479727 atttaaggcaaaatctaacggttgttaattagtcgtgataagtcggaacgttttttctcgctgt 10479790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 40215053 - 40214979
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaatctataa 83  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcaatttataa 40214979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 18404507 - 18404442
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 18404442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25463741 - 25463676
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctc 25463676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 3559682 - 3559620
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattg 3559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 9910293 - 9910359
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctca 9910359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 16045798 - 16045859
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 41876442 - 41876507
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctc 41876507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 44094763 - 44094698
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 44094698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37821834 - 37821901
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcaa 37821901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 10479549 - 10479621
Alignment:
Q  75 aatctataaatatctctatcaactctcctaagccttcaat---tactattcacaaaaaatcagacatcaaact 144  Q
    ||||||||||||||||| ||||||||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  10479549 aatctataaatatctctttcaactctcctaaaccttcaattactactattcacaaaaaatcagacatcaaact 10479621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 36966708 - 36966774
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctca 36966774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 19015469 - 19015404
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| || |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 19015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 6883552 - 6883486
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  6883552 gattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctca 6883486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 32000269 - 32000333
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||  ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctca 32000333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25973478 - 25973414
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||||||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctc 25973414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 34519823 - 34519752
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaatcta 80  Q
    ||||||||| ||||| |||| || ||  |||||| ||||||||||||||||||||||||||||||| |||||    
T  34519823 gattattcttctatggcatttttgaatctttcttaataaaatctttcttgatatatagcattgctctatcta 34519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 40273755 - 40273702
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| || ||||||||| ||||||||||||||||| |||||||||||    
T  40273755 atgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctc 40273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 27523255 - 27523322
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttga--tatatagcattgctc 74  Q
    ||||||||||  |||||||||||||| |||||||||||||||  |||||||  |||||||||||||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctc 27523322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 41876301 - 41876241
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  41876301 gattattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 41876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 51621017 - 51620980
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||| |||||||||||||||||||||||||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctc 51620980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 44691030 - 44691097
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaat 77  Q
    |||||||||| |||| |||||| ||  ||| || |||||||||||||||||||| | |||||||||||    
T  44691030 attattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctcaat 44691097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 52329356 - 52329317
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  52329356 tttcttgataaattctttcttgatatataacattgctcaa 52329317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 18404654 - 18404714
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  18404654 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 18404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 19015610 - 19015670
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  19015610 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatt 19015670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 44690881 - 44690828
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||||| ||||||||||| ||  ||||||||||||||| || |||||||    
T  44690881 gattattctgccatgtcattcttgaatctttcttgataaaatcattattgatat 44690828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 51737711 - 51737771
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  51737711 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 51737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 32393923 - 32393857
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 32393857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 35353106 - 35353040
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctca 35353040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 1645965 - 1646030
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctc 1646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32064810 - 32064745
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 32064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 34665447 - 34665382
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 34665382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 14128929 - 14128865
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17841850 - 17841915
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 17841915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 20091801 - 20091866
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 20091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 24211553 - 24211618
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 24211618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 37132658 - 37132727
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaatc 78  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  37132658 gattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctcaatc 37132727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37986055 - 37986116
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 40780129 - 40780194
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 40780194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 42755042 - 42755107
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctc 42755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 15187624 - 15187560
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15187560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6108233 - 6108298
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  6108233 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctc 6108298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 26042116 - 26042181
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctc 26042181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 38017036 - 38016979
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatag 66  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 31347782 - 31347847
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| || ||||||||| ||||| |||||||||||||||||||||||    
T  31347782 gattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctc 31347847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 39772801 - 39772866
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||| ||||||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctc 39772866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 41819778 - 41819843
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| || ||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctc 41819843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 8453887 - 8453837
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  8453887 atgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7017865 - 7017930
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| || ||||||| | |||||||||| ||||||||||||||||||    
T  7017865 gattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctc 7017930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 27782117 - 27782181
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    ||||||||||| |||||||| || ||  |||||||||||||| ||||||||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 30835047 - 30835111
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| || |||| | ||||||||||||||||||||||| ||||||||    
T  30835047 gattattctgccatgtcattcttgaattttt-tcgataaaatctttcttgatatataacattgctc 30835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 25581239 - 25581299
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 69  Q
    ||||||| ||| ||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  25581239 gattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 7022043 - 7021988
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatat 64  Q
    ||||||||||| || |||||||| || ||||||||| |||||||||||||||||||    
T  7022043 gattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 27835465 - 27835520
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||||||| || ||||||| |||| |||||| |||||||||||||||||||||    
T  27835465 atgtcattcttgaatttttcttaataagatctttattgatatatagcattgctcaa 27835520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3890474 - 3890413
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| || |||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  3890474 gattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcatt 3890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 30055584 - 30055541
Alignment:
Q  33 aaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||    
T  30055584 aaatttttttgataaaatcttccttggtatatagcattgctcaa 30055541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 1503702 - 1503642
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  1503702 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 1503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3596900 - 3596840
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| || ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3596900 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3596840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 17841709 - 17841649
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  17841709 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 17841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 24844870 - 24844919
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| || ||||||| ||||||| ||||||||||| |||||||    
T  24844870 atgtcattcttgaatttttcttaataaaatatttcttgatatgtagcatt 24844919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25581098 - 25581038
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| || |||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25581098 gattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 26041972 - 26041912
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  26041972 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 32064964 - 32065012
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064964 atgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 32065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 40779988 - 40779928
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  40779988 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 40779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 42754889 - 42754841
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42754889 atgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 42754841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 11361131 - 11361197
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 11361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2477701 - 2477636
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 2477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 33584329 - 33584395
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctca 33584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 4892267 - 4892202
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 4892202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25398303 - 25398238
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 25398238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37321793 - 37321859
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttctt-gatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6043511 - 6043576
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6043576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 3362841 - 3362778
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 3362778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 38899728 - 38899791
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 38899791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 12850864 - 12850798
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaat 77  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctcaat 12850798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 22913054 - 22913120
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  22913054 gattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctca 22913120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 8145440 - 8145379
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14138733 - 14138668
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctc 14138668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 3522006 - 3522072
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||| || |||||||||||| |||||||||||||||||||| |||||||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctca 3522072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 4434007 - 4434073
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| || |||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  4434007 gattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctca 4434073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 17545685 - 17545751
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||    
T  17545685 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctca 17545751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 12614745 - 12614798
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||  |||||||||||||| |||||||||||||||||||||||    
T  12614745 atgtcattcttgaatctttcttgataaaatatttcttgatatatagcattgctc 12614798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3521866 - 3521806
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3521866 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 6043371 - 6043311
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043371 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 6043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 10458462 - 10458409
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| ||| ||||||||||| || ||||||||||||||| |||||||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 27481879 - 27481830
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| || |||||||||||||||||||||| ||| ||||||||    
T  27481879 atgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 3362997 - 3363045
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  3362997 atgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3363045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 4892408 - 4892468
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  4892408 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 4892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 12614597 - 12614536
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||||||  ||| ||||||||||| | |||||||| |||||||    
T  12614597 gattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatt 12614536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 13664679 - 13664642
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  13664679 tttcttgataaaatctttcttaatatataacattgctc 13664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 33584188 - 33584128
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  33584188 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 37217053 - 37217119
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 37217119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2754782 - 2754717
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 2754717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3574527 - 3574592
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 11347332 - 11347268
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11347268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 3456129 - 3456063
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 3456063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 48160970 - 48160904
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 48160904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 6041949 - 6041883
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctca 6041883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 19650900 - 19650965
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 42297406 - 42297353
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42297406 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 42297353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 8320584 - 8320655
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaatcta 80  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8320584 gattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctccatcta 8320655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 30385076 - 30385010
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||| |||||||||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctca 30385010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 33145777 - 33145712
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  33145777 gattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattgctca 33145712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3137414 - 3137479
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 3137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 22426344 - 22426409
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  22426344 gattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctc 22426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33113858 - 33113793
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 33113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 37522118 - 37522053
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctc 37522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 34482910 - 34482975
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| | || |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 34482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 36865027 - 36865092
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| | |||||||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  36865027 gattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctc 36865092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 9797029 - 9797093
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    ||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||| |||||||    
T  9797029 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 42921196 - 42921154
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42921196 atgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33839596 - 33839531
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  |||| ||||||||| |||| ||||||||||||||||| ||||||| ||||||||    
T  33839596 gattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctc 33839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 8362045 - 8362111
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| || ||||||||| |   | ||||||||||||||||||||||||    
T  8362045 gattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctca 8362111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 24343585 - 24343547
Alignment:
Q  36 ttttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  24343585 ttttcttgataaaatctttcttaatatatagcattgctc 24343547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattg 71  Q
    |||||||||||||||||||||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37522259 - 37522319
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  37522259 gattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 37522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 41224286 - 41224233
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| || ||||||||| |||||||||||| |||||||||| |||||    
T  41224286 atgtcattcttgaatttttcttgagaaaatctttcttaatatatagcagtgctc 41224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 47738169 - 47738117
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    |||||||||| || |||||||| ||  ||||||||||||||||||||||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 26612848 - 26612785
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| ||||||||||| || |||| || ||||||||||| ||||||||||  |||||||    
T  26612848 ttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataatattgctc 26612785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 47402630 - 47402661
Alignment:
Q  43 gataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||||||||||||||||||||||||    
T  47402630 gataaaatctttcttgatatatagcattgctc 47402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 3137273 - 3137213
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 3137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 34482747 - 34482687
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  34482747 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 34482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 40328049 - 40328098
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  40328049 atgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 40328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 42921343 - 42921392
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||  ||||||||||||||| ||||| |||| |||||||    
T  42921343 atgtcattcttaaatatttcttgataaaatcattcttaatatctagcatt 42921392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 47738317 - 47738370
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| ||| ||||||||||| ||  ||||||||||||||| ||||||||||    
T  47738317 gattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 33839753 - 33839797
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatata 65  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||||    
T  33839753 atgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 6127340 - 6127275
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 6127275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23291084 - 23291149
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 23291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 17705465 - 17705532
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 17705532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33695327 - 33695392
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 33695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33696761 - 33696696
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 33696696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18365573 - 18365638
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 18365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18370837 - 18370902
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 18370902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 17176021 - 17176087
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctca 17176087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 6031741 - 6031806
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctc 6031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25986995 - 25986930
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  25986995 gattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 28675201 - 28675148
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28675201 atgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 28675148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 18889698 - 18889761
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctc 18889761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 8515725 - 8515787
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  8515725 gattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 29693652 - 29693712
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||| ||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatt 29693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 11548588 - 11548647
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagca 68  Q
    ||||||||||| ||||||||||| || ||||||||| ||||| |||||||||||||||||    
T  11548588 gattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 2309423 - 2309488
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||| |||||||||||   | ||||||||||||||||||||||||| ||||||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctc 2309488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 32702270 - 32702216
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    ||||||||||| || |||||||| |||||||| ||| ||||||||||||||||||    
T  32702270 gattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9752245 - 9752309
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| || |||||||| || |||||||||| || | |||||||||||||| ||||||||    
T  9752245 gattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgctc 9752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33696903 - 33696963
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33696903 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 33696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35160822 - 35160757
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 35160757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10661952 - 10661888
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 21936146 - 21936080
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctca 21936080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9293576 - 9293641
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctc 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23268062 - 23268127
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 23268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 33380272 - 33380207
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 13354910 - 13354846
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 13354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 31174834 - 31174896
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 71  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  31174834 gattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattg 31174896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 7475520 - 7475573
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  7475520 atgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 7475573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 14941366 - 14941431
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||  |||||| |||||||||||||||||||||||||||||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctc 14941431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 43330977 - 43330912
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| || |||| |||| |||||||||||||||||||||||||||||    
T  43330977 gattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctc 43330912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 21393688 - 21393751
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgc 72  Q
    ||||||||| | |||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  21393688 gattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgc 21393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 9723470 - 9723405
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  ||||||||||||||  |||||| |||||||||||||| ||||||||||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctc 9723405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 3989141 - 3989104
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgata 46  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  3989141 gattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 23267921 - 23267861
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  23267921 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 23267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 27847697 - 27847632
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  ||||||||||| ||  |||||| |||||||||||||| ||||| ||||||||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctc 27847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 40262714 - 40262753
Alignment:
Q  37 tttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  40262714 tttcttgataaaatctttcttgatatataacattgttcaa 40262753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 9723612 - 9723665
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||||  ||||||||||||||  ||||||||| ||||| ||||||||||    
T  9723612 gattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||||| || |||||||| || |||| || |||||||||||||||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 22592930 - 22592979
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  22592930 atgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 33380413 - 33380473
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  33380413 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33380473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 35160965 - 35161025
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  35160965 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24395035 - 24394971
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 24394971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 3962044 - 3961977
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 3961977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 4974735 - 4974801
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctca 4974801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 34482900 - 34482834
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34482900 gattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattgctca 34482834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15577850 - 15577915
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42611876 - 42611811
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 42611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 45637777 - 45637712
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 45637712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 48880927 - 48880994
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcaa 48880994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 15329338 - 15329273
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15329273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 25167850 - 25167915
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  25167850 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctc 25167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37477080 - 37477145
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  37477080 gattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctc 37477145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 20010098 - 20010163
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  20010098 gattattctg-tatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctca 20010163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 36790467 - 36790533
Alignment:
Q  10 attattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaa 76  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattgttcaa 36790533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 18037043 - 18036978
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  18037043 gattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctc 18036978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35444623 - 35444558
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctc 35444558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 29737204 - 29737143
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  29737204 gattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42696148 - 42696083
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||||||||||||||||||||||||  || || |||||||||||||||||||||| ||||||||    
T  42696148 gattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctc 42696083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 15238447 - 15238381
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| || ||||||||| ||| | ||||||||||||||||||||||||    
T  15238447 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctca 15238381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 30848634 - 30848597
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgata 46  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30848634 gattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25167715 - 25167655
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25167715 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 48880786 - 48880726
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  48880786 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 48880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 7745112 - 7745176
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 22199326 - 22199260
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctca 22199260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 49387888 - 49387954
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctca 49387954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 10442789 - 10442854
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 10442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 31078819 - 31078884
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 31078884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 36073010 - 36072947
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 36072947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 2624902 - 2624836
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctca 2624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21802322 - 21802387
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 21802387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23964465 - 23964530
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctc 23964530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 24128304 - 24128239
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 24128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 33530688 - 33530753
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctc 33530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47290131 - 47290066
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 47290066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 50156578 - 50156643
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctc 50156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 4751509 - 4751446
Alignment:
Q  11 ttattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 4751446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 24392732 - 24392667
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  24392732 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 24392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 36073415 - 36073354
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 44893491 - 44893426
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctc 44893426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 46441909 - 46441843
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctca 75  Q
    ||||||| ||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  46441909 gattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctca 46441843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 53123096 - 53123030
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttctt-gataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  53123096 gattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctc 53123030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 42671734 - 42671675
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagca 68  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||| |||||||||||||    
T  42671734 gattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37934944 - 37935006
Alignment:
Q  12 tattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    |||||| | ||||||||||| | ||||| |||||||||||||| |||||||||||||||||||    
T  37934944 tattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctc 37935006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 44893213 - 44893279
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttctt-gataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||| || || |||||||||||| ||||||||||||||||    
T  44893213 gattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctc 44893279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 37219837 - 37219890
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||    
T  37219837 gattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

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Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 24392880 - 24392940
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||||||  ||||||||| ||||| |||||||||| |||||||    
T  24392880 gattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatt 24392940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25063434 - 25063373
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||| | ||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  25063434 gattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 44893072 - 44893012
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  44893072 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893012  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 44893632 - 44893692
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  44893632 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893692  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 9088935 - 9088898
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgata 46  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  9088935 gattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 9089076 - 9089136
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  9089076 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 9089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 17655648 - 17655697
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||||||||||  ||||||||||||||| ||||| |||| |||||||    
T  17655648 atgtcattcttaaatctttcttgataaaatcattcttaatatctagcatt 17655697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 24128457 - 24128505
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  24128457 atgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 24128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 36073555 - 36073615
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  36073555 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 36073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 46442050 - 46442110
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  46442050 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 46442110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 53123237 - 53123297
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  53123237 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 53123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 36073755 - 36073795
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgata 61  Q
    ||||||||||||||  |||||| ||||||||||||||||||    
T  36073755 atgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 4461 - 4396
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 4602 - 4662
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| || ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4602 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 3133 - 3069
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 73  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 11686 - 11618
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctcaat 77  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcaat 11618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 11827 - 11879
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatat 62  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| ||||||||||    
T  11827 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 11879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 12907 - 12842
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 13060 - 13108
Alignment:
Q  21 atgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  13060 atgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 13108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 41076 - 41011
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 41011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47915 - 47850
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 74  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctc 47850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 48055 - 48115
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  48055 gattattgtgctatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 48115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 47; Significance: 9e-18; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatata 63  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 16190 - 16250
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  16190 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 16250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 26142 - 26202
Alignment:
Q  9 gattattctgctatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 70  Q
    ||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  26142 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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