View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15804_high_29 (Length: 241)
Name: NF15804_high_29
Description: NF15804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15804_high_29 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 2065558 - 2065784
Alignment:
| Q |
15 |
tcaaaagacaaatcacgagagtacacataaaactcaaagtaagaatactcataagcaccatgatgtgtacaagattgggttttacccttgatataatgtt |
114 |
Q |
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| T |
2065558 |
tcaaaagacaaatcacgagagtacacataaaactcaaagtaagaatactcataagcaccatgatgtgtacaagattgggttttacccttgttataatgtt |
2065657 |
T |
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| Q |
115 |
ttgctcatataaatgaatccatgttcattattttgggtcaaattaaattaaaagcatgaattaagcgatcaattcattcaaagtacttatccaccgtata |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2065658 |
ttgctcatataaatgaatccatgttcattattttgggtcaaattaaattaaaagcatgaattaagcgatcaattcattcaaagtacttatccaccgtata |
2065757 |
T |
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| Q |
215 |
ttcttttttatattttctagctaagat |
241 |
Q |
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||||||||||||||||||||||||||| |
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| T |
2065758 |
ttcttttttatattttctagctaagat |
2065784 |
T |
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