View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15805_low_12 (Length: 331)
Name: NF15805_low_12
Description: NF15805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15805_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 23489279 - 23489565
Alignment:
| Q |
29 |
attgaaggaaacgaccaagacagtctttgtggttaaacgtgttcacttgtggtgcgcaaatttggtgtctttaatacattaatcagacaagaaaaggaag |
128 |
Q |
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| T |
23489279 |
attgaaggaaacgaccaagacagtttttgtggttaaacgtgttcacttgtggtgcgcaaatttggtttctttaatacattaatcagacaagaaaaggaag |
23489378 |
T |
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| Q |
129 |
nnnnnnnnnggggtgataacttctcttttgttatgtcgttacttcagcttcaacccatcaatggaatatcacagcttttggttcagaagaaatgtagcag |
228 |
Q |
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| T |
23489379 |
aaaaacaaaggggtgataacttctctcttgttatgtcgttacttcagcttcaacccatcaatggaatatcacagcttttggttcagaagaaatgtagcag |
23489478 |
T |
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| Q |
229 |
aaaagcattcaggttcagagcacaagctgttccctccaaaacccaggtactaagctacttcctcttcaacatactaatatgtgttat |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
23489479 |
aaaagcattcaggttcagagcacaagctgttccctccaaaacccaggtactaagctactacctcttcaacatactaatatgtgttat |
23489565 |
T |
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