View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15805_low_13 (Length: 316)
Name: NF15805_low_13
Description: NF15805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15805_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 3805932 - 3806217
Alignment:
| Q |
14 |
atgaacacatgcacttgtggtctgggtatgaaaagcacagcacaatttgcccaaataattgataattgaaagaaagaaaaaatactaagaagagaacaga |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3805932 |
atgaacacatgcacttgtggtctgggtatgaaaagcacagaacaatttgcccaaataattgataagtgaaagaaagaaaaaatactaagaagagaacaga |
3806031 |
T |
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| Q |
114 |
ttctgcttannnnnnngaagtatgtgctcttttttataaagtctaaagtcaaaactgcatccctatttttatgtaacagaactatcacaactcatcacat |
213 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
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| T |
3806032 |
ttctgcttatttttttgaagtatgtgctcttttttataaagtctaaagtcaaaactgcatccctattttcatgcaacagaactatcacaactcatcacat |
3806131 |
T |
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| Q |
214 |
attaaaatgagacctaataataaggagttgccaaactgattggaaacaaataataagcatttcgtgccatctcttccacttgttag |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3806132 |
attaaaatgagacctaataataaggagttgccaaactgattggaaacaaataataagcatttcgtgccatctcttccacttgttag |
3806217 |
T |
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