View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15805_low_19 (Length: 230)
Name: NF15805_low_19
Description: NF15805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15805_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 44393245 - 44393018
Alignment:
| Q |
1 |
tcttctggtggagatatacaatcttctccttcatttccatggccatttcatcctcaacaaggttcttcaccaggtccagcaccaacaccagaagcaagtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44393245 |
tcttctggtggagatatacaatcttctccttcatttccatggccatttcatcctcaccaaggttcttcaccaggtccagcaccaacaccagaagcaagtt |
44393146 |
T |
|
| Q |
101 |
caccaataacagttccattagtaccatataaaggcagtggtgatggcatgcctttcattaacagtaaccctgcagttcctctgcctactggtgaagttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44393145 |
caccaataacagttccattagtaccatataaaggcagtggtgatggcatgcctttcattaacagtaaccctgcagttcctctgcctactggtgaagttga |
44393046 |
T |
|
| Q |
201 |
ttctgctactatacacccctttgctact |
228 |
Q |
| |
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||||||||||||||||||| |||||||| |
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| T |
44393045 |
ttctgctactatacacccccttgctact |
44393018 |
T |
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