View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15805_low_5 (Length: 450)
Name: NF15805_low_5
Description: NF15805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15805_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 43725766 - 43725332
Alignment:
| Q |
1 |
ttactttccactaaacaatatgacattgacgttgcattaatacgagatggaaaagacagagacccacgacctaacccaaatgttccgtcagaccctacaa |
100 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
43725766 |
ttactttccactaaacaatatgacattgacgatgcattaatacgagatggaaaagacagtgacccacgacctaacccaaatgttccgtcagaccctacaa |
43725667 |
T |
|
| Q |
101 |
atggaccttggtttttattactgcaacctaatgaaaccctatccacccatccagagctttcaaacgacaccgtttcatttattaaaacaccttcggtatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
43725666 |
atggaccttggtttttattactgcaacctaatgaaaccctatccacccatccagagctttcaaacgacaccgtttcatttattaaaacaccttcagtatt |
43725567 |
T |
|
| Q |
201 |
tgtaccgtctttgtaggtaatattgtatctacaataaccatcatcgctacaagaagaatttggaagtaagttacagtgtttggtttcgcaggaaagtagg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43725566 |
tgtaccgtctttgtaggtaatattgtatctacaataaccatcatcgctacaagaagaatttggaagtaagttacagtgtttggtttcgcaggaaagtagg |
43725467 |
T |
|
| Q |
301 |
gtgtatgaagaggactgtgatgggtcgaaaatggaatcaggttgatcgtaacatttgatacatggttggcattgaagccaggtgaaatcggtttggaggt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43725466 |
gtgtatgaagaggactgtgatgggtcgaaaatggaatcaggttgatcgtaacatttgatacatggttggcattgaagccaagtgaaatcggtttggaggt |
43725367 |
T |
|
| Q |
401 |
cgaaaatcatgtagaatttttgtggtggtcctcca |
435 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |
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| T |
43725366 |
cgaaaatcatgtagaatttttgtggtggtcctcca |
43725332 |
T |
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