View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15808_high_9 (Length: 322)
Name: NF15808_high_9
Description: NF15808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15808_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 2817507 - 2817261
Alignment:
| Q |
18 |
agaaagagaagaaagtatcacaaacaaaggagnnnnnnncattttcataaaccaagaacatgcattctggcttaattggcttgtttgccacaaaccacac |
117 |
Q |
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| T |
2817507 |
agaaagagaagaaagtatcacaaacaaaggagtttttttcattttcataaaacaagaacatgcattctggcttaattggcttgtttgccacaaaccacac |
2817408 |
T |
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| Q |
118 |
gtaattagacatgtctaaggtccattccaaatttactaaaacactgagtatgcttttactttttccatcaattcggataataaaatccgaataattaggt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2817407 |
gtaattagacatgtctaaggtccattccaaatttactaaaacactgagtatgcttttactttttccatcaattcggataataaaatccgaataattaggt |
2817308 |
T |
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| Q |
218 |
agttcaaagtttataatccgaacacagcaaatagcagagccaggtcc |
264 |
Q |
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| T |
2817307 |
agttcaaagtttataatccaaacacagcaaatagctgagccaggtcc |
2817261 |
T |
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