View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15808_low_16 (Length: 219)
Name: NF15808_low_16
Description: NF15808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15808_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 53663500 - 53663691
Alignment:
| Q |
14 |
agaagagaaagtaaatatattattcacacaatcatacctcatcatgctaccctgaatatcagaatcttgaggactcgctttattttgtgaatttgaatga |
113 |
Q |
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| T |
53663500 |
agaagagcaagtaaatatattattcacgcaatcatacctcatcatgttgccctgaatatcagaatcttgaggactcactttattttgtgaatttgaatga |
53663599 |
T |
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| Q |
114 |
agggatttacaagtcaccccagaagcagagcgaacctgcataaaatatttattgccaagatctagcaaatcaatttgctaatgcaagtaggt |
205 |
Q |
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| T |
53663600 |
agggatttacaagtcaccccagaagcagagcaaacctgcataaaatatttattgccaagatctagcaaatcaatttgctaatgcaggtaggt |
53663691 |
T |
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