View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15808_low_8 (Length: 349)
Name: NF15808_low_8
Description: NF15808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15808_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 104354 - 104687
Alignment:
| Q |
1 |
agaaatgaagagaaagtaaaagatagttacagtctagtaacgtggttatcacgatcacaggtaacatgaaaccatgtacaaggatccaccaaagtggggt |
100 |
Q |
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| T |
104354 |
agaaaagaagagaaagtaaaagatagttacagtctagtaacgtggttatcacgatcacaggtaacatgaaaccatgtacaaggatccaccaaagtggggt |
104453 |
T |
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| Q |
101 |
cccaactctgtagaatgttatttgggtcttttacagctcttctgaatgcatacaaggcatcacctgttagttttcatcagacagacagacagaacatcaa |
200 |
Q |
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| T |
104454 |
cccaactctgtagaatgttatttgggtcttttacagctcttctgaatgcatacaaggcatcacctgttagttttcatcagacagacagacagaacatcaa |
104553 |
T |
|
| Q |
201 |
aacaaaagattctttctttcagattatgtgtatgcttgtttgtatgtatcaatcaaaacaaaagagactgtactttacttaccttcagagtttgcatttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
104554 |
aacaaaagattctttctttcagattatgtgtatgcttgtttgtatgtatcaatcaaaacaaaagagactgtactttacttaccttcagagtttgcatttg |
104653 |
T |
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| Q |
301 |
ctatatcgaaagggtatgataataagagaatagt |
334 |
Q |
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||||||| |||||||||||||||||||||||||| |
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| T |
104654 |
ctatatcaaaagggtatgataataagagaatagt |
104687 |
T |
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