View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15809_low_1 (Length: 309)
Name: NF15809_low_1
Description: NF15809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15809_low_1 |
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Alignment Details
Target: chr6 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 781285 - 781005
Alignment:
| Q |
18 |
caaacaaggtgttattagataacagatgttgtccacgaagttattcttgcatgtagcagctttagtttgatgaattaccaattgaaagagacttcagtca |
117 |
Q |
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| T |
781285 |
caaacaaggtgttattagataacagatattgtccacgaagttattcttgcatgtagcagctttagtttgatgaattaccaattgaaagagacttcagtca |
781186 |
T |
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| Q |
118 |
tcgatgccaatgccactcccccaactataggtagaagagaagaaaccacccataaagtaggcatctgttcatttaggaatcaaaactgaatgtcagaaaa |
217 |
Q |
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| T |
781185 |
tcgatgccaatgccactcccccaactataggtagaagagaagaaaccacccataaagtaggcatctgttcatttaggaatcaaaactgaatgtcagaaaa |
781086 |
T |
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| Q |
218 |
ccaaaacatttagatatcggtcactttcccatttatgagcatcaataacaaccgagtcattttccactatacagccttcat |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
781085 |
ccaaaacatttagatatcggtcactttcccatttatgagcatcaataacaaccgagtcattttccactatacagccttcat |
781005 |
T |
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