View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1580_high_54 (Length: 210)

Name: NF1580_high_54
Description: NF1580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1580_high_54
NF1580_high_54
[»] chr1 (47 HSPs)
chr1 (3-194)||(34988349-34988537)
chr1 (3-59)||(46320939-46320995)
chr1 (1-53)||(30294870-30294922)
chr1 (5-56)||(921750-921801)
chr1 (1-52)||(8029218-8029269)
chr1 (3-54)||(12071643-12071694)
chr1 (3-54)||(29794692-29794743)
chr1 (1-55)||(4243388-4243442)
chr1 (3-53)||(22204569-22204619)
chr1 (3-53)||(37029191-37029241)
chr1 (3-60)||(8028953-8029010)
chr1 (3-60)||(8535779-8535836)
chr1 (3-60)||(8601018-8601075)
chr1 (3-56)||(9332900-9332953)
chr1 (3-56)||(9356673-9356726)
chr1 (4-53)||(18589849-18589898)
chr1 (3-56)||(20596126-20596179)
chr1 (3-55)||(8774296-8774348)
chr1 (3-55)||(11204505-11204557)
chr1 (3-51)||(14460303-14460351)
chr1 (3-63)||(15161287-15161347)
chr1 (3-55)||(20471412-20471464)
chr1 (3-55)||(20560073-20560125)
chr1 (3-59)||(28503129-28503185)
chr1 (3-55)||(37028926-37028978)
chr1 (3-59)||(45884942-45884998)
chr1 (3-55)||(45885212-45885264)
chr1 (6-61)||(11051888-11051943)
chr1 (6-53)||(12071911-12071958)
chr1 (4-55)||(45664404-45664455)
chr1 (3-53)||(23792780-23792830)
chr1 (13-55)||(30295143-30295185)
chr1 (5-55)||(43677101-43677151)
chr1 (6-55)||(3383962-3384011)
chr1 (3-56)||(6809065-6809118)
chr1 (3-52)||(27396529-27396578)
chr1 (3-56)||(31797061-31797114)
chr1 (4-57)||(40618726-40618779)
chr1 (3-55)||(7598607-7598659)
chr1 (5-53)||(8774562-8774610)
chr1 (3-55)||(22204303-22204355)
chr1 (3-55)||(23341962-23342014)
chr1 (3-55)||(30288174-30288226)
chr1 (13-53)||(32038112-32038152)
chr1 (3-55)||(38622401-38622453)
chr1 (3-55)||(39427676-39427728)
chr1 (4-56)||(42589666-42589717)
[»] chr5 (40 HSPs)
chr5 (111-186)||(12024499-12024574)
chr5 (4-54)||(20465502-20465552)
chr5 (3-56)||(23103920-23103973)
chr5 (3-60)||(27264102-27264159)
chr5 (3-60)||(28394926-28394983)
chr5 (3-55)||(5088072-5088124)
chr5 (3-63)||(11480026-11480086)
chr5 (2-54)||(39529027-39529079)
chr5 (4-54)||(41140378-41140428)
chr5 (6-55)||(1055634-1055683)
chr5 (5-58)||(9560099-9560152)
chr5 (3-56)||(29401352-29401405)
chr5 (3-55)||(15526702-15526754)
chr5 (3-55)||(40297663-40297715)
chr5 (3-55)||(40687932-40687984)
chr5 (4-55)||(3728282-3728333)
chr5 (3-54)||(13170143-13170194)
chr5 (3-50)||(13960691-13960738)
chr5 (3-54)||(21583322-21583373)
chr5 (3-50)||(25631344-25631391)
chr5 (3-54)||(42947400-42947451)
chr5 (4-55)||(43586050-43586101)
chr5 (5-55)||(9071966-9072016)
chr5 (3-57)||(22052702-22052756)
chr5 (3-53)||(23263408-23263458)
chr5 (5-55)||(35306708-35306758)
chr5 (4-54)||(43585804-43585854)
chr5 (1-54)||(2546633-2546686)
chr5 (3-60)||(13960953-13961010)
chr5 (7-56)||(22626982-22627031)
chr5 (6-55)||(22925697-22925746)
chr5 (5-53)||(39234-39282)
chr5 (3-55)||(3020857-3020909)
chr5 (4-52)||(3728528-3728576)
chr5 (3-55)||(4125707-4125759)
chr5 (3-55)||(16666071-16666123)
chr5 (4-52)||(16860070-16860118)
chr5 (3-55)||(18266350-18266402)
chr5 (3-55)||(22052437-22052489)
chr5 (3-55)||(34734336-34734388)
[»] chr3 (51 HSPs)
chr3 (3-59)||(51214422-51214478)
chr3 (1-63)||(52917580-52917642)
chr3 (1-54)||(42230032-42230085)
chr3 (3-60)||(44177281-44177338)
chr3 (3-60)||(44183965-44184022)
chr3 (3-55)||(27984395-27984447)
chr3 (3-54)||(45744162-45744213)
chr3 (3-53)||(32508182-32508232)
chr3 (3-57)||(42230294-42230348)
chr3 (5-54)||(2711700-2711749)
chr3 (3-56)||(8313946-8313999)
chr3 (3-56)||(10864112-10864165)
chr3 (3-56)||(19391635-19391688)
chr3 (4-53)||(20982280-20982329)
chr3 (3-56)||(32204845-32204898)
chr3 (5-54)||(40082455-40082504)
chr3 (3-56)||(47943456-47943509)
chr3 (1-50)||(53422338-53422387)
chr3 (5-53)||(10864384-10864432)
chr3 (3-55)||(19391966-19392018)
chr3 (3-55)||(19914735-19914787)
chr3 (3-55)||(27748506-27748558)
chr3 (3-55)||(27766780-27766832)
chr3 (3-55)||(28964151-28964203)
chr3 (3-59)||(32459046-32459102)
chr3 (3-59)||(44895643-44895699)
chr3 (3-55)||(44895911-44895963)
chr3 (3-55)||(49997919-49997971)
chr3 (3-55)||(53532069-53532121)
chr3 (4-55)||(12881233-12881284)
chr3 (4-55)||(12881479-12881530)
chr3 (4-55)||(20982523-20982574)
chr3 (3-62)||(25126261-25126320)
chr3 (3-54)||(45760231-45760282)
chr3 (4-55)||(47423392-47423443)
chr3 (5-59)||(9630762-9630816)
chr3 (3-57)||(28964417-28964471)
chr3 (3-53)||(36441482-36441532)
chr3 (3-56)||(257699-257752)
chr3 (6-59)||(38511923-38511976)
chr3 (5-58)||(49859520-49859573)
chr3 (1-62)||(50033304-50033365)
chr3 (3-55)||(3384251-3384303)
chr3 (3-55)||(7818931-7818983)
chr3 (3-55)||(9633661-9633713)
chr3 (3-55)||(10439284-10439336)
chr3 (3-55)||(19914474-19914526)
chr3 (3-55)||(31117618-31117670)
chr3 (3-55)||(33252482-33252534)
chr3 (3-55)||(41281843-41281895)
chr3 (3-55)||(47943723-47943775)
[»] chr8 (39 HSPs)
chr8 (1-56)||(27872707-27872762)
chr8 (3-60)||(1657648-1657705)
chr8 (3-60)||(14032029-14032086)
chr8 (3-55)||(27872972-27873024)
chr8 (3-55)||(29233768-29233820)
chr8 (1-56)||(6107114-6107169)
chr8 (3-54)||(42906371-42906422)
chr8 (3-57)||(38593183-38593237)
chr8 (3-60)||(414918-414975)
chr8 (3-56)||(27339540-27339593)
chr8 (5-54)||(32318771-32318820)
chr8 (3-56)||(42906637-42906690)
chr8 (3-55)||(4132752-4132804)
chr8 (3-55)||(6014681-6014733)
chr8 (3-55)||(20095684-20095736)
chr8 (3-55)||(30845823-30845875)
chr8 (4-56)||(39616815-39616867)
chr8 (3-55)||(42267721-42267773)
chr8 (3-55)||(45208974-45209026)
chr8 (6-53)||(31190643-31190690)
chr8 (6-57)||(38593451-38593502)
chr8 (12-55)||(41554859-41554902)
chr8 (12-55)||(42524708-42524751)
chr8 (1-55)||(15187926-15187980)
chr8 (5-55)||(20791263-20791313)
chr8 (3-53)||(28596193-28596243)
chr8 (3-57)||(42642351-42642405)
chr8 (3-60)||(6335591-6335648)
chr8 (4-57)||(40918389-40918442)
chr8 (3-55)||(6014417-6014469)
chr8 (3-59)||(16531512-16531568)
chr8 (5-53)||(18531098-18531146)
chr8 (3-55)||(20820015-20820067)
chr8 (6-50)||(25250212-25250256)
chr8 (3-55)||(36226678-36226730)
chr8 (3-55)||(37953372-37953424)
chr8 (3-55)||(39625965-39626017)
chr8 (3-55)||(39635515-39635567)
chr8 (3-55)||(45106433-45106485)
[»] chr7 (41 HSPs)
chr7 (115-194)||(43895370-43895449)
chr7 (3-60)||(5096781-5096838)
chr7 (3-60)||(39753865-39753922)
chr7 (3-55)||(18296114-18296166)
chr7 (3-54)||(19194424-19194475)
chr7 (3-54)||(26612341-26612392)
chr7 (3-54)||(30699022-30699073)
chr7 (3-54)||(35924154-35924205)
chr7 (4-58)||(19233335-19233389)
chr7 (3-61)||(42997048-42997106)
chr7 (3-56)||(30757221-30757274)
chr7 (5-54)||(40436035-40436084)
chr7 (4-53)||(43408224-43408273)
chr7 (3-55)||(7974654-7974706)
chr7 (3-55)||(25982987-25983039)
chr7 (3-54)||(9629011-9629062)
chr7 (3-66)||(20387540-20387603)
chr7 (3-66)||(20392014-20392077)
chr7 (3-50)||(45231783-45231830)
chr7 (3-53)||(930708-930758)
chr7 (3-57)||(930971-931025)
chr7 (1-55)||(7195719-7195773)
chr7 (3-57)||(9629279-9629333)
chr7 (5-59)||(10318885-10318939)
chr7 (12-62)||(22164917-22164967)
chr7 (12-62)||(22223624-22223674)
chr7 (3-57)||(37452312-37452366)
chr7 (1-55)||(38879411-38879465)
chr7 (5-50)||(3931759-3931804)
chr7 (5-50)||(18798033-18798078)
chr7 (3-55)||(18852756-18852808)
chr7 (3-55)||(21917513-21917565)
chr7 (3-55)||(23740528-23740580)
chr7 (3-55)||(25986923-25986975)
chr7 (3-51)||(30028396-30028444)
chr7 (3-55)||(30140918-30140970)
chr7 (3-55)||(35121411-35121463)
chr7 (3-55)||(35121676-35121728)
chr7 (3-55)||(35437204-35437256)
chr7 (3-55)||(38879159-38879211)
chr7 (3-55)||(44214657-44214709)
[»] chr4 (58 HSPs)
chr4 (3-54)||(54556878-54556929)
chr4 (1-55)||(24415071-24415125)
chr4 (3-60)||(23315641-23315698)
chr4 (3-59)||(24415337-24415393)
chr4 (3-54)||(6386730-6386781)
chr4 (3-69)||(6386995-6387062)
chr4 (5-59)||(14578432-14578486)
chr4 (3-53)||(48278179-48278229)
chr4 (3-61)||(54215948-54216006)
chr4 (3-56)||(7644722-7644775)
chr4 (3-60)||(22160091-22160148)
chr4 (3-56)||(37289452-37289505)
chr4 (3-60)||(51537423-51537480)
chr4 (3-55)||(104198-104250)
chr4 (3-55)||(7705588-7705640)
chr4 (3-51)||(8891656-8891704)
chr4 (3-55)||(12641082-12641134)
chr4 (3-55)||(39946078-39946130)
chr4 (3-55)||(42672331-42672383)
chr4 (3-55)||(52045719-52045771)
chr4 (3-55)||(52311065-52311117)
chr4 (4-55)||(4902134-4902185)
chr4 (4-55)||(4902420-4902471)
chr4 (4-55)||(13021243-13021294)
chr4 (3-54)||(13608184-13608235)
chr4 (2-57)||(17265845-17265900)
chr4 (6-53)||(17266013-17266060)
chr4 (4-55)||(47821473-47821524)
chr4 (3-57)||(1377601-1377655)
chr4 (3-57)||(13607913-13607967)
chr4 (3-57)||(26675319-26675372)
chr4 (12-54)||(33338302-33338344)
chr4 (3-56)||(6768794-6768847)
chr4 (3-56)||(18988176-18988229)
chr4 (1-50)||(24543004-24543053)
chr4 (6-59)||(29548174-29548227)
chr4 (3-56)||(35364458-35364511)
chr4 (6-55)||(37973511-37973560)
chr4 (3-56)||(39136295-39136348)
chr4 (1-54)||(50513044-50513097)
chr4 (3-55)||(232954-233006)
chr4 (3-55)||(7119857-7119909)
chr4 (3-55)||(7644455-7644507)
chr4 (3-59)||(8482853-8482909)
chr4 (3-59)||(17262084-17262140)
chr4 (3-55)||(20472809-20472861)
chr4 (3-55)||(26171239-26171291)
chr4 (3-55)||(26675051-26675103)
chr4 (3-55)||(29548443-29548495)
chr4 (3-59)||(29627870-29627926)
chr4 (3-55)||(30998181-30998233)
chr4 (3-55)||(31250732-31250784)
chr4 (3-59)||(35083574-35083630)
chr4 (4-56)||(39332562-39332614)
chr4 (5-53)||(39668872-39668920)
chr4 (3-55)||(47854243-47854295)
chr4 (3-55)||(54556612-54556664)
chr4 (3-55)||(55586880-55586932)
[»] chr6 (35 HSPs)
chr6 (3-57)||(7391740-7391794)
chr6 (3-57)||(29697106-29697160)
chr6 (5-57)||(2100376-2100428)
chr6 (3-59)||(4405504-4405560)
chr6 (3-59)||(6261640-6261696)
chr6 (3-55)||(11614896-11614948)
chr6 (3-63)||(12257027-12257087)
chr6 (3-54)||(1815239-1815290)
chr6 (3-54)||(28563583-28563634)
chr6 (3-62)||(30239467-30239526)
chr6 (3-53)||(23883351-23883401)
chr6 (3-53)||(34705639-34705689)
chr6 (4-53)||(10894134-10894183)
chr6 (13-54)||(21009016-21009057)
chr6 (3-55)||(11213446-11213498)
chr6 (3-55)||(13042406-13042458)
chr6 (3-55)||(23291254-23291306)
chr6 (3-55)||(28563325-28563377)
chr6 (3-55)||(30965689-30965741)
chr6 (3-55)||(31951464-31951516)
chr6 (1-55)||(3194697-3194751)
chr6 (4-51)||(3534800-3534847)
chr6 (4-63)||(15273243-15273302)
chr6 (4-55)||(26716635-26716686)
chr6 (3-53)||(20630612-20630662)
chr6 (3-53)||(27771477-27771527)
chr6 (3-56)||(11322288-11322341)
chr6 (3-56)||(14997006-14997059)
chr6 (4-53)||(26479307-26479356)
chr6 (3-56)||(27223572-27223625)
chr6 (3-55)||(5606294-5606346)
chr6 (6-50)||(10255786-10255830)
chr6 (3-55)||(11615162-11615214)
chr6 (3-55)||(16735828-16735880)
chr6 (4-56)||(20080363-20080415)
[»] scaffold0035 (1 HSPs)
scaffold0035 (3-60)||(81565-81622)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-54)||(12919-12972)
scaffold0014 (3-55)||(79250-79302)
[»] scaffold0777 (1 HSPs)
scaffold0777 (3-55)||(133-185)
[»] chr2 (28 HSPs)
chr2 (3-55)||(13732430-13732482)
chr2 (3-59)||(19256852-19256908)
chr2 (3-59)||(33004703-33004759)
chr2 (3-55)||(42445635-42445687)
chr2 (4-55)||(3263033-3263084)
chr2 (3-54)||(45127099-45127150)
chr2 (4-54)||(25430034-25430084)
chr2 (5-54)||(30218971-30219020)
chr2 (4-53)||(34850921-34850970)
chr2 (3-60)||(41072091-41072148)
chr2 (3-59)||(2937052-2937107)
chr2 (3-63)||(9484691-9484751)
chr2 (3-55)||(20436056-20436108)
chr2 (3-59)||(24857877-24857933)
chr2 (4-55)||(315267-315318)
chr2 (4-55)||(25429920-25429971)
chr2 (12-55)||(28217145-28217188)
chr2 (3-54)||(45395501-45395552)
chr2 (4-54)||(3263280-3263330)
chr2 (4-53)||(19473076-19473125)
chr2 (3-60)||(40324627-40324684)
chr2 (13-54)||(40445826-40445867)
chr2 (3-56)||(41071826-41071879)
chr2 (3-54)||(11366797-11366849)
chr2 (3-55)||(20436316-20436368)
chr2 (5-57)||(24365135-24365187)
chr2 (3-55)||(24895174-24895226)
chr2 (3-55)||(25887892-25887944)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-59)||(238889-238943)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-54)||(10198-10251)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-56)||(400701-400754)
[»] scaffold0922 (1 HSPs)
scaffold0922 (3-55)||(96-148)
[»] scaffold0606 (1 HSPs)
scaffold0606 (3-55)||(6866-6918)
[»] scaffold0227 (1 HSPs)
scaffold0227 (3-55)||(1010-1062)
[»] scaffold0102 (1 HSPs)
scaffold0102 (3-55)||(14568-14620)
[»] scaffold0693 (1 HSPs)
scaffold0693 (5-55)||(4786-4836)
[»] scaffold0328 (1 HSPs)
scaffold0328 (4-58)||(15769-15823)
[»] scaffold1171 (1 HSPs)
scaffold1171 (3-55)||(817-869)
[»] scaffold0154 (1 HSPs)
scaffold0154 (4-48)||(26511-26555)


Alignment Details
Target: chr1 (Bit Score: 154; Significance: 7e-82; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 3 - 194
Target Start/End: Original strand, 34988349 - 34988537
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaagaaaaactaatggaactacttccattaactacatagatt 102  Q
    |||||||| ||||||||||||||||||| | |||||||||| ||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||    
T  34988349 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagtctattttaaaa---aaactaatggaactacttccattaactacatagatt 34988445  T
Q  103 gcaacggaccaggatctgctgctctagtaaaacacacagtttcacaaagttttgaattgtgaccattggatctttattggcatggaactatt 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34988446 gcaacggaccaggatctgctgctctagtaaaacacacagtttcacaaagttttgaattgtgaccattggatctttattggcatgggactatt 34988537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 46320939 - 46320995
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  46320939 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcctatttt 46320995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30294922 - 30294870
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  30294922 gatccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcc 30294870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 921801 - 921750
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||| ||||||||| ||||||||||| | |||||||||||||||||||||    
T  921801 cataaccgcaacttttggaaagatagaggttcaaaagtgtaattaagcctat 921750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8029218 - 8029269
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagc 52  Q
    |||||||||||||||||||| ||||||||| | |||||||||| ||||||||    
T  8029218 gatccataactgcaacttttggaaagatagggatccaaaagtgcaattaagc 8029269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 12071694 - 12071643
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  12071694 tccataaccgcaactttttgaaagataggggtccaaaagtgtaattaagcct 12071643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 29794743 - 29794692
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||||||    
T  29794743 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcct 29794692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4243388 - 4243442
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||| |||||||||| |||||||| | |||||||||| |||||||||||    
T  4243388 gatccataaccgcaacttttaaaaagatagggatccaaaagtgcaattaagccta 4243442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 22204569 - 22204619
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  22204569 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 22204619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 37029191 - 37029241
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  37029191 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 37029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 8029010 - 8028953
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||||||||    
T  8029010 tccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctatttta 8028953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 8535779 - 8535836
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||| ||| |||||    
T  8535779 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaaacctttttta 8535836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 8601018 - 8601075
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||| ||| |||||    
T  8601018 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaaacctttttta 8601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 9332953 - 9332900
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  ||||||||||||||||||||| |||||| |||||    
T  9332953 tccataaccgcaacttttgaaaagatagagctccaaaagtgcaattaaacctat 9332900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 9356726 - 9356673
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  ||||||||||||||||||||| |||||| |||||    
T  9356726 tccataaccgcaacttttgaaaagatagagctccaaaagtgcaattaaacctat 9356673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 18589898 - 18589849
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  18589898 ccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 18589849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 20596126 - 20596179
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  20596126 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 20596179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8774348 - 8774296
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  8774348 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 8774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 11204557 - 11204505
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  11204557 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 11204505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 14460351 - 14460303
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaag 51  Q
    |||||||||||||||||| ||||||||| | |||||||||| |||||||    
T  14460351 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaag 14460303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 15161347 - 15161287
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaa 63  Q
    |||||||| ||||||||| ||||||||  | |||||||||| |||||||||||| ||||||    
T  15161347 tccataaccgcaacttttggaaagatatgggtccaaaagtgcaattaagcctatattaaaa 15161287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 20471464 - 20471412
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||||| || ||||||| |||||||||||    
T  20471464 tccataaccgcaacttttggaaagatagaggtctaaaagtgcaattaagccta 20471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 20560073 - 20560125
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||||| || ||||||| |||||||||||    
T  20560073 tccataaccgcaacttttggaaagatagaggtctaaaagtgcaattaagccta 20560125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 28503185 - 28503129
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| |||||||||  |||||||||| || |||||||||||||||||| ||||    
T  28503185 tccataaccgcaacttttgaaaagatagaggtctaaaagtgtaattaagcctttttt 28503129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 37028978 - 37028926
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||  |||||||| | |||||||||| |||||||||||    
T  37028978 tccataactgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 37028926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 45884998 - 45884942
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||||||    
T  45884998 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatttt 45884942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 45885212 - 45885264
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  45885212 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 45885264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 11051943 - 11051888
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaa 61  Q
    ||||| ||||||||| ||||||||| | |||||||||| ||||||||||| |||||    
T  11051943 ataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaatttaa 11051888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 12071911 - 12071958
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  12071911 ataaccgcaacttttggaaagatagagatccaaaagtgcaattaagcc 12071958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 45664404 - 45664455
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  45664404 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 45664455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 23792830 - 23792780
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||| |||||||||   ||||||||||||||||||||    
T  23792830 tccataaccgcaacttttggaaagataggtgtccaaaagtgtaattaagcc 23792780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 30295143 - 30295185
Alignment:
Q  13 caacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||||||||||| | |||||||||| |||||||||||    
T  30295143 caacttttagaaagataggggtccaaaagtgcaattaagccta 30295185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 43677151 - 43677101
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  43677151 cataaccgcaacttttggaaagatagggatccaaaagtgcaattaagccta 43677101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 3384011 - 3383962
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||| |||||||||  |||||||||| |||||||||| |||||||||||    
T  3384011 ataaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagccta 3383962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6809118 - 6809065
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||||    
T  6809118 tccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctat 6809065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 27396578 - 27396529
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagc 52  Q
    ||||||||  |||||||||||||||||| | |||||||||| ||||||||    
T  27396578 tccataaccacaacttttagaaagatagggatccaaaagtgaaattaagc 27396529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 31797114 - 31797061
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||| |||| ||||||||| | |||||||||| ||||||||||||    
T  31797114 tccataaccgcaatttttggaaagataggggtccaaaagtgcaattaagcctat 31797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40618779 - 40618726
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    ||||||| ||||||||| |||| |||| | |||||||||| |||||||||||||    
T  40618779 ccataaccgcaacttttggaaatataggggtccaaaagtgcaattaagcctatt 40618726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7598659 - 7598607
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||  | |||||||||| |||||||||||    
T  7598659 tccataaccgcaacttttggaaagatatgggtccaaaagtgcaattaagccta 7598607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8774562 - 8774610
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||||||||||| ||||||||  | |||||||||| |||||||||    
T  8774562 cataactgcaacttttggaaagataagggtccaaaagtgcaattaagcc 8774610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 22204355 - 22204303
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  22204355 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 22204303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 23342014 - 23341962
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  23342014 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 23341962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30288226 - 30288174
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||| | ||||||||| | |||||||||| |||||||||||    
T  30288226 tccataaccgcaacttctggaaagataggggtccaaaagtgcaattaagccta 30288174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 32038112 - 32038152
Alignment:
Q  13 caacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||||||||||||| | |||||||||| |||||||||    
T  32038112 caacttttagaaagatagggatccaaaagtgcaattaagcc 32038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 38622453 - 38622401
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||||||||| |  |||||||| | |||||||||| |||||||||||    
T  38622453 tccataactgcaacttctgaaaagataggggtccaaaagtgcaattaagccta 38622401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 39427676 - 39427728
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | ||||||| || |||||||||||    
T  39427676 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagccta 39427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 42589666 - 42589717
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||||||||||    
T  42589666 ccataaccgcaactttga-aaagataggggtccaaaagtgtaattaagcctat 42589717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 12024574 - 12024499
Alignment:
Q  111 ccaggatctgctgctctagtaaaacacacagtttcacaaagttttgaattgtgaccattggatctttattggcatg 186  Q
    ||||||||||||||| |||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  12024574 ccaggatctgctgctgtagttaaacacacagtttcacactgttttaaattgtgaccattggatctttattggcatg 12024499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 20465552 - 20465502
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  20465552 ccataactgcaacttttggaaagataggggtccaaaagtgtaattaagcct 20465502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 23103973 - 23103920
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  23103973 tccataaccgcaacttttggaaagataggggtccaaaagtgtaattaagcctat 23103920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 27264159 - 27264102
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  27264159 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 27264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 28394983 - 28394926
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  28394983 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 28394926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5088124 - 5088072
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||||||||||| ||||||||| | |||||||||| |||||||||||    
T  5088124 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaagccta 5088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 11480086 - 11480026
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaa 63  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||||||||||    
T  11480086 tccataacctcaacttttggaaagataggggtccaaaagtgcaattaagcctattttaaaa 11480026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 39529027 - 39529079
Alignment:
Q  2 atccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  39529027 atccataaccgcaacttttggaaagataggggtccaaaagtgtaattaagcct 39529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 41140378 - 41140428
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  41140378 ccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 41140428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 1055634 - 1055683
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  1055634 ataaccgcaacttttagaaagataggggtccaaaagtgcaattaagccta 1055683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 9560099 - 9560152
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattt 58  Q
    |||||| ||||||||||||||||||| | ||||||| || ||||||||||||||    
T  9560099 cataaccgcaacttttagaaagataggggtccaaaaatgcaattaagcctattt 9560152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 29401352 - 29401405
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  29401352 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 29401405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 15526754 - 15526702
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  15526754 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 15526702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 40297715 - 40297663
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  40297715 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 40297663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 40687932 - 40687984
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||  |||||||| | |||||||||| |||||||||||    
T  40687932 tccataactgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 40687984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 3728333 - 3728282
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||||| |||||||||  |||||||||||    
T  3728333 ccataaccgcaacttttggaaagatagaggtccaaaagtacaattaagccta 3728282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13170143 - 13170194
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||||||||||||  | |||||||||| ||||||||||    
T  13170143 tccataaccgcaacttttagaaagataagggtccaaaagtgcaattaagcct 13170194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 13960738 - 13960691
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||||| ||||||||||||||||||| | |||||||||| ||||||    
T  13960738 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaa 13960691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21583373 - 21583322
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||||| ||| |||||| ||||||||||    
T  21583373 tccataaccgcaacttttggaaagatagaggtcccaaagtgcaattaagcct 21583322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 25631344 - 25631391
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||||| |||||||||||||| |||||| |||||||||| ||||||    
T  25631344 tccataaccgcaacttttagaaaaatagagatccaaaagtgcaattaa 25631391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 42947451 - 42947400
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| |||||||||||||||||||   |||||||||| ||||||||||    
T  42947451 tccataaccgcaacttttagaaagataggagtccaaaagtgcaattaagcct 42947400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 43586050 - 43586101
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  43586050 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 43586101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 9072016 - 9071966
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  9072016 cataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 9071966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 22052702 - 22052756
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | ||||||| || |||||||||||||    
T  22052702 tccataaccgcaacttttggaaagataggggtccaaaattgcaattaagcctatt 22052756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 23263408 - 23263458
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| |||||| || ||||||||||| |||||||||| |||||||||    
T  23263408 tccataaccgcaactgttggaaagatagaggtccaaaagtgcaattaagcc 23263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 35306758 - 35306708
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  35306758 cataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 35306708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 43585854 - 43585804
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||| ||||    
T  43585854 ccataaccgcaacttttagaaagataggggtccaaaagtgcaattatgcct 43585804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2546633 - 2546686
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||||||||||||||||  |||||||| | | |||||||| ||||||||||    
T  2546633 gatccataactgcaacttttgaaaagataggggttcaaaagtgcaattaagcct 2546686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 13960953 - 13961010
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| |||||||||  |||||||||| |||||||||  ||||||||||| ||||    
T  13960953 tccataaccgcaacttttgaaaagatagaggtccaaaagtacaattaagcctaattta 13961010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 22627031 - 22626982
Alignment:
Q  7 taactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||| |||||||| ||||||||||| |||||||||| |||||| |||||    
T  22627031 taactacaacttttggaaagatagaggtccaaaagtgcaattaaacctat 22626982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 22925746 - 22925697
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||| ||||||||| ||||||||||| | |||||||| |||||||||||    
T  22925746 ataaccgcaacttttggaaagatagaggttcaaaagtgcaattaagccta 22925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 39234 - 39282
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||||||||||||  |||||||| | |||||||||| |||||||||    
T  39234 cataactgcaacttttgaaaagatagggatccaaaagtgcaattaagcc 39282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 3020857 - 3020909
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  3020857 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 3020909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 3728528 - 3728576
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagc 52  Q
    ||||||| | ||||||| ||||||||||| |||||||||| ||||||||    
T  3728528 ccataaccgtaacttttggaaagatagagatccaaaagtgcaattaagc 3728576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 4125707 - 4125759
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||  | |||||||||| |||||||||||    
T  4125707 tccataaccgcaacttttggaaagataagggtccaaaagtgcaattaagccta 4125759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 16666123 - 16666071
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  16666123 tccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccta 16666071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 16860070 - 16860118
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagc 52  Q
    ||||||| |||||||||||||| |||| | |||||||||| ||||||||    
T  16860070 ccataaccgcaacttttagaaaaataggggtccaaaagtgcaattaagc 16860118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 18266402 - 18266350
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||| ||| ||||||||| | |||||||||| |||||||||||    
T  18266402 tccataaccgcaacctttggaaagataggggtccaaaagtgcaattaagccta 18266350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 22052489 - 22052437
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| |  ||||||||| |||||||||||    
T  22052489 tccataaccgcaacttttggaaagatagggggccaaaagtgcaattaagccta 22052437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 34734336 - 34734388
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  34734336 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 34734388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 51214422 - 51214478
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  51214422 tccataaccgcaacttttaaaaagatagaggtccaaaagtgcaattaagcctatttt 51214478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52917580 - 52917642
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaa 63  Q
    |||||||||| ||||||||| ||||||||| |  ||||||||| |||||||||||||||||||    
T  52917580 gatccataaccgcaacttttggaaagataggggcccaaaagtgcaattaagcctattttaaaa 52917642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42230085 - 42230032
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  42230085 gatccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcct 42230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 44177338 - 44177281
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  44177338 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 44177281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 44184022 - 44183965
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  44184022 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 44183965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 27984395 - 27984447
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | ||||||||||||||||||||||    
T  27984395 tccataaccgcaacttttggaaagataggggtccaaaagtgtaattaagccta 27984447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45744162 - 45744213
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  45744162 tccataaccgcaacttttggaaagatagagatccaaaagtgcaattaagcct 45744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 32508182 - 32508232
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  32508182 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 32508232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 42230294 - 42230348
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||    
T  42230294 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatt 42230348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 2711749 - 2711700
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  2711749 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 2711700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 8313999 - 8313946
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  8313999 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 8313946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 10864165 - 10864112
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  10864165 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 10864112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 19391688 - 19391635
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19391688 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 19391635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 20982329 - 20982280
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  20982329 ccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcc 20982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 32204898 - 32204845
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||  ||||||||| ||||||||||| |||||||||| ||||||||||||    
T  32204898 tccataagcgcaacttttggaaagatagaggtccaaaagtgcaattaagcctat 32204845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 40082455 - 40082504
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  40082455 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 40082504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 47943509 - 47943456
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  |||||||||| |||||||||| ||||||||||||    
T  47943509 tccataaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcctat 47943456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53422338 - 53422387
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||||||| ||||||||||||||||||| | || ||||||||||||||    
T  53422338 gatccataaccgcaacttttagaaagataggggtctaaaagtgtaattaa 53422387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 10864384 - 10864432
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||||||||||| ||||||||| | |||||||||| |||||||||    
T  10864384 cataactgcaacttttggaaagataggggtccaaaagtgcaattaagcc 10864432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 19391966 - 19392018
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  19391966 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 19392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 19914735 - 19914787
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  19914735 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 19914787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 27748506 - 27748558
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  27748506 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 27748558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 27766780 - 27766832
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  27766780 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 27766832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 28964203 - 28964151
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  28964203 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 28964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 32459046 - 32459102
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||||| ||||||| || |||||||||| ||||    
T  32459046 tccataaccgcaacttttggaaagatagagatccaaaaatgcaattaagcctttttt 32459102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 44895699 - 44895643
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||  |||||||||| |||||||| | |||||||||| |||||||||||||||    
T  44895699 tccataatcgcaacttttaaaaagataggggtccaaaagtgcaattaagcctatttt 44895643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 44895911 - 44895963
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  44895911 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 44895963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 49997919 - 49997971
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||||| |||||||||| |||||||||||    
T  49997919 tccataaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagccta 49997971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 53532069 - 53532121
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  53532069 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 53532121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 12881284 - 12881233
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  12881284 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 12881233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 12881479 - 12881530
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  12881479 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 12881530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 20982523 - 20982574
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  20982523 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 20982574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 25126261 - 25126320
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaa 62  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||| ||||||    
T  25126261 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctagtttaaa 25126320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 45760282 - 45760231
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||||| || ||||||| ||||||||||    
T  45760282 tccataaccgcaacttttggaaagatagaggtcaaaaagtgcaattaagcct 45760231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 47423392 - 47423443
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  47423392 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 47423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 9630816 - 9630762
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||| |||||||||  |||||||| | |||||||||| |||||||||||||||    
T  9630816 cataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctatttt 9630762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 28964417 - 28964471
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||||    
T  28964417 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagcctatt 28964471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 36441532 - 36441482
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| |||||||||||||||||||   |||||||||| |||||||||    
T  36441532 tccataaccgcaacttttagaaagataggagtccaaaagtgcaattaagcc 36441482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 257699 - 257752
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||||||  |||||||| ||||||||| | |||||||||| ||||||||||||    
T  257699 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagcctat 257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 38511923 - 38511976
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    ||||| |||||||||  |||||||| | |||||||||| |||||||||||||||    
T  38511923 ataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatttt 38511976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 49859573 - 49859520
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattt 58  Q
    |||||| |||||||||||||||||||   |||||||||| |||||| |||||||    
T  49859573 cataaccgcaacttttagaaagataggagtccaaaagtgcaattaaacctattt 49859520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50033365 - 50033304
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaa 62  Q
    |||||||||| | ||||||| ||||||||||| || ||||||| |||||||||  |||||||    
T  50033365 gatccataaccgtaacttttggaaagatagaggtctaaaagtgcaattaagccatttttaaa 50033304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 3384251 - 3384303
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | | |||||||| |||||||||||    
T  3384251 tccataaccgcaacttttggaaagataggggttcaaaagtgcaattaagccta 3384303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7818983 - 7818931
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | | |||||||| |||||| ||||    
T  7818983 tccataaccgcaacttttagaaagataggggttcaaaagtgcaattaaaccta 7818931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9633661 - 9633713
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | | |||||||| |||||||||||    
T  9633661 tccataaccgcaacttttggaaagataggggttcaaaagtgcaattaagccta 9633713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 10439336 - 10439284
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||  ||||||||| ||| |||||| |||||||||| |||||||||||    
T  10439336 tccataaccacaacttttaaaaaaatagaggtccaaaagtgcaattaagccta 10439284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 19914526 - 19914474
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  19914526 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 19914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 31117670 - 31117618
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  31117670 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 31117618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 33252534 - 33252482
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||  ||||||||||||||||||| | |||||||||  |||||||||||    
T  33252534 tccataatcgcaacttttagaaagataggggtccaaaagtacaattaagccta 33252482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 41281895 - 41281843
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||    
T  41281895 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagccta 41281843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 47943723 - 47943775
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  47943723 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 47943775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27872762 - 27872707
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||    
T  27872762 gatccataaccgcaacttttagaaagatagggatccaaaagtgcaattaagcctat 27872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 1657648 - 1657705
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  1657648 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 1657705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 14032086 - 14032029
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  14032086 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 14032029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 27872972 - 27873024
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||||||||||||||||||||| | |||||||| | |||||||||||    
T  27872972 tccataactgcaacttttagaaagatagggatccaaaagagcaattaagccta 27873024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 29233768 - 29233820
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||| |||||||||| |||||||||| |||||||||||    
T  29233768 tccataaccgcaacttttaaaaagatagaggtccaaaagtgcaattaagccta 29233820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6107169 - 6107114
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  6107169 gatccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 6107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 42906422 - 42906371
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  42906422 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcct 42906371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 38593237 - 38593183
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||    
T  38593237 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatt 38593183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 414918 - 414975
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||||||||    
T  414918 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatttta 414975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 27339593 - 27339540
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||| |||||||| | |||||||||| ||||||||||||    
T  27339593 tccataaccgcaacttttaaaaagataggggtccaaaagtgcaattaagcctat 27339540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 32318771 - 32318820
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  32318771 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 32318820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 42906637 - 42906690
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  42906637 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 42906690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 4132804 - 4132752
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  4132804 tccataaccgcaacttttggaaagatagggatccaaaagtgcaattaagccta 4132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 6014681 - 6014733
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||| |||||||| | |||||||||| |||||||||||    
T  6014681 tccataaccgcaacttttaaaaagatagggatccaaaagtgcaattaagccta 6014733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 20095736 - 20095684
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  20095736 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 20095684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 30845823 - 30845875
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  30845823 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 30845875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 39616815 - 39616867
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  39616815 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 39616867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 42267721 - 42267773
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  42267721 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 42267773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 45209026 - 45208974
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||| ||||    
T  45209026 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaaaccta 45208974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 31190690 - 31190643
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  31190690 ataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcc 31190643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 38593451 - 38593502
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    ||||| ||||||||| |||| |||||| |||||||||| |||||||||||||    
T  38593451 ataaccgcaacttttggaaatatagaggtccaaaagtgcaattaagcctatt 38593502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 41554859 - 41554902
Alignment:
Q  12 gcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||| | |||||||||| |||||||||||    
T  41554859 gcaacttttagaaagatagggatccaaaagtgcaattaagccta 41554902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 42524751 - 42524708
Alignment:
Q  12 gcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||| | |||||||||| |||||||||||    
T  42524751 gcaacttttagaaagatagggatccaaaagtgcaattaagccta 42524708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15187980 - 15187926
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  15187980 gatccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 15187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 20791263 - 20791313
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||| ||||||||| ||||||||||| ||||||| || |||||||||||    
T  20791263 cataaccgcaacttttggaaagatagaggtccaaaaatgcaattaagccta 20791313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 28596193 - 28596243
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||||  |||||||||||||||||| | |||||||||| |||||||||    
T  28596193 tccataaccacaacttttagaaagatagggatccaaaagtgcaattaagcc 28596243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 42642351 - 42642405
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||| ||| ||||||||| | |||||||||| |||||||||||||    
T  42642351 tccataaccgcaacctttggaaagataggggtccaaaagtgcaattaagcctatt 42642405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 6335591 - 6335648
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||  |||||||||  |||||||| | |||||||||| ||||||||||||||||    
T  6335591 tccataatcgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatttta 6335648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40918442 - 40918389
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    ||||||| | |||||||| |||||||| | |||||||||| |||||||||||||    
T  40918442 ccataaccgtaacttttaaaaagataggggtccaaaagtgaaattaagcctatt 40918389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 6014469 - 6014417
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  6014469 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 6014417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 16531512 - 16531568
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| |||||||||  |||||||| | || ||||||| |||||||||||||||    
T  16531512 tccataaccgcaacttttgaaaagataggggtctaaaagtgcaattaagcctatttt 16531568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 18531098 - 18531146
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||| | ||||||||||||||||| | |||||||||| |||||||||    
T  18531098 cataaccgtaacttttagaaagataggggtccaaaagtgcaattaagcc 18531146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 20820015 - 20820067
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | | |||||||| |||||||||||    
T  20820015 tccataaccgcaacttttggaaagataggggttcaaaagtgcaattaagccta 20820067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 25250212 - 25250256
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    ||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  25250212 ataaccgcaacttttggaaagatagaggtccaaaagtgcaattaa 25250256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 36226678 - 36226730
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||    
T  36226678 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagccta 36226730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 37953424 - 37953372
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  37953424 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 37953372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 39626017 - 39625965
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | | |||||||| |||||| ||||    
T  39626017 tccataaccgcaacttttagaaagataggggttcaaaagtgcaattaaaccta 39625965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 39635567 - 39635515
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | | |||||||| |||||| ||||    
T  39635567 tccataaccgcaacttttagaaagataggggttcaaaagtgcaattaaaccta 39635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 45106485 - 45106433
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  45106485 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 45106433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 194
Target Start/End: Original strand, 43895370 - 43895449
Alignment:
Q  115 gatctgctgctctagtaaaacacacagtttcacaaagttttgaattgtgaccattggatctttattggcatggaactatt 194  Q
    ||||||||||| ||| ||| || ||||||||||| ||||||||||| |||| ||||||| |||||||| |||| ||||||    
T  43895370 gatctgctgctgtaggaaagcatacagtttcacacagttttgaattatgactattggatttttattggtatggtactatt 43895449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 5096838 - 5096781
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  5096838 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 5096781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 39753922 - 39753865
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  39753922 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 39753865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 18296114 - 18296166
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  18296114 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagccta 18296166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 19194424 - 19194475
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  19194424 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcct 19194475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 26612392 - 26612341
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  26612392 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 26612341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 30699073 - 30699022
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||||||    
T  30699073 tccataactgcaacttttggaaagatagggatccaaaagtgcaattaagcct 30699022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 35924154 - 35924205
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||||||    
T  35924154 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcct 35924205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 19233389 - 19233335
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattt 58  Q
    ||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||    
T  19233389 ccataaccgcaacttttggaaagatagggttccaaaagtgcaattaagcctattt 19233335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 42997106 - 42997048
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaa 61  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||| ||||    
T  42997106 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatgttaa 42997048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 30757274 - 30757221
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||| |||||||| | |||||||||| ||||||||||||    
T  30757274 tccataaccgcaacttttaaaaagataggggtccaaaagtgcaattaagcctat 30757221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40436084 - 40436035
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  40436084 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 40436035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 43408273 - 43408224
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  43408273 ccataaccgcaacttttggaaagatagaggtccaaaagtgaaattaagcc 43408224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 7974654 - 7974706
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  7974654 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 7974706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 25983039 - 25982987
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  25983039 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 25982987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 9629062 - 9629011
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| |||||||||| ||||||||   |||||||||||||||||||||    
T  9629062 tccataaccgcaacttttaaaaagataggagtccaaaagtgtaattaagcct 9629011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 20387603 - 20387540
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaagaa 66  Q
    |||||||||||||||||| ||||||||  | |||||||||| ||||||| || |||| ||||||    
T  20387603 tccataactgcaacttttggaaagataagggtccaaaagtgcaattaagtctttttttaaagaa 20387540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 20392077 - 20392014
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaagaa 66  Q
    |||||||||||||||||| ||||||||  | |||||||||| ||||||| || |||| ||||||    
T  20392077 tccataactgcaacttttggaaagataagggtccaaaagtgcaattaagtctttttttaaagaa 20392014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 45231783 - 45231830
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||    
T  45231783 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaa 45231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 930758 - 930708
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| |||||||||  |||||||| | ||||||||||||||||||||    
T  930758 tccataaccgcaacttttgaaaagataggggtccaaaagtgtaattaagcc 930708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 930971 - 931025
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||||    
T  930971 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatt 931025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7195719 - 7195773
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||| ||||||||| |||| ||| || |||||||||| |||||||||||    
T  7195719 gatccataaccgcaacttttggaaaaatataggtccaaaagtggaattaagccta 7195773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 9629279 - 9629333
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | ||||||| || |||||||||||||    
T  9629279 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagcctatt 9629333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 10318939 - 10318885
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    ||||||||||||||||  |||||||| | |||||||||| |||||||||| ||||    
T  10318939 cataactgcaacttttgaaaagataggggtccaaaagtgcaattaagcctttttt 10318885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 22164967 - 22164917
Alignment:
Q  12 gcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaa 62  Q
    |||||||||||||||||||||  ||||||||  ||||||||||| ||||||    
T  22164967 gcaacttttagaaagatagagggccaaaagtacaattaagcctaatttaaa 22164917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 22223674 - 22223624
Alignment:
Q  12 gcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaa 62  Q
    |||||||||||||||||||||  ||||||||  ||||||||||| ||||||    
T  22223674 gcaacttttagaaagatagagggccaaaagtacaattaagcctaatttaaa 22223624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 37452312 - 37452366
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||||    
T  37452312 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatt 37452366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38879411 - 38879465
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| | ||||||||| ||||||||| | |||||||||| |||||||||||    
T  38879411 gatccatagccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 38879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 3931759 - 3931804
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||    
T  3931759 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaa 3931804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 18798078 - 18798033
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||    
T  18798078 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaa 18798033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 18852756 - 18852808
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||    
T  18852756 tccataacctcaacttttggaaagataggggtccaaaagtgcaattaagccta 18852808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 21917513 - 21917565
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  21917513 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 21917565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 23740528 - 23740580
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||  |||||||||||    
T  23740528 tccataaccgcaacttttcgaaagataggggtccaaaagtacaattaagccta 23740580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 25986975 - 25986923
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  25986975 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 25986923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 30028444 - 30028396
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaag 51  Q
    |||||||| ||||||||||||||||||| | ||| |||||| |||||||    
T  30028444 tccataaccgcaacttttagaaagataggggtcctaaagtgcaattaag 30028396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30140970 - 30140918
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | ||||||| || |||||||||||    
T  30140970 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagccta 30140918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 35121463 - 35121411
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  35121463 tccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccta 35121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 35121676 - 35121728
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  35121676 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 35121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 35437256 - 35437204
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||| ||| |||||||||||    
T  35437256 tccataaccgcaacttttggaaagataggggtccaaatgtgcaattaagccta 35437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 38879211 - 38879159
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||||| |||||||||  |||||||||||    
T  38879211 tccataaccgcaacttttgaaaagatagaggtccaaaagtacaattaagccta 38879159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 44214709 - 44214657
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||    
T  44214709 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagccta 44214657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 54556878 - 54556929
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  54556878 tccataaccgcaacttttagaaagatagaggtccaaaagtgcaattaagcct 54556929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24415125 - 24415071
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||||||||||||||| ||||||||| | |||||||||| |||||||||||    
T  24415125 gatccataactgcaacttttggaaagataggggtccaaaagtgcaattaagccta 24415071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 23315641 - 23315698
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  23315641 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 23315698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 24415337 - 24415393
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  24415337 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 24415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 6386781 - 6386730
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||||||    
T  6386781 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcct 6386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 6386995 - 6387062
Alignment:
Q  3 tccataactgcaacttttagaaagata-gagctccaaaagtgtaattaagcctattttaaaagaaaaa 69  Q
    |||||||| |||||||||||||||||| | | |||||||||| ||||||||||| |||||||| ||||    
T  6386995 tccataaccgcaacttttagaaagatagggggtccaaaagtgcaattaagcctaatttaaaagcaaaa 6387062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 14578486 - 14578432
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||| ||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  14578486 cataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 14578432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 48278179 - 48278229
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  48278179 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 48278229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 54216006 - 54215948
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaa 61  Q
    |||||||| ||||||||  ||||||||| | |||||||||| |||||||||||||||||    
T  54216006 tccataaccgcaactttcggaaagataggggtccaaaagtgcaattaagcctattttaa 54215948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 7644722 - 7644775
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||||||||||||| | | |||||||| ||||||||||||    
T  7644722 tccataaccgcaacttttagaaagataggggttcaaaagtgcaattaagcctat 7644775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 22160091 - 22160148
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | || ||||||| ||||||||||||||||    
T  22160091 tccataaccgcaacttttggaaagataggggtctaaaagtgcaattaagcctatttta 22160148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 37289505 - 37289452
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  37289505 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 37289452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 51537480 - 51537423
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||| ||||    
T  51537480 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaattta 51537423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 104250 - 104198
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  104250 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 104198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7705640 - 7705588
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  7705640 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 7705588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 8891704 - 8891656
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaag 51  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||    
T  8891704 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaag 8891656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 12641082 - 12641134
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  12641082 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 12641134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 39946130 - 39946078
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||  | |||||||||| |||||||||||    
T  39946130 tccataaccgcaacttttagaaagataatggtccaaaagtgcaattaagccta 39946078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 42672331 - 42672383
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  42672331 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 42672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 52045771 - 52045719
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  52045771 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 52045719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 52311065 - 52311117
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  52311065 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 52311117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4902185 - 4902134
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  4902185 ccataacagcaacttttggaaagataggggtccaaaagtgcaattaagccta 4902134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 4902420 - 4902471
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  4902420 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 4902471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 13021243 - 13021294
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  13021243 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 13021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13608184 - 13608235
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| |||||||||| ||||||||   |||||||||||||||||||||    
T  13608184 tccataaccgcaacttttaaaaagataggagtccaaaagtgtaattaagcct 13608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 17265900 - 17265845
Alignment:
Q  2 atccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    ||||||||| ||||||||||||||||||| | |||||||||  |||||||| ||||    
T  17265900 atccataaccgcaacttttagaaagataggggtccaaaagtacaattaagcttatt 17265845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 17266013 - 17266060
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  17266013 ataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcc 17266060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 47821524 - 47821473
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  47821524 ccataaccgcaactttttgaaagataggggtccaaaagtgcaattaagccta 47821473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 1377655 - 1377601
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | | |||||||| |||||||||||||    
T  1377655 tccataaccgcaacttttggaaagataggggttcaaaagtgcaattaagcctatt 1377601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 13607967 - 13607913
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | ||||||| || |||||||||||||    
T  13607967 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagcctatt 13607913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 26675319 - 26675372
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||    
T  26675319 tccataaccgcaacttttggaaagataggg-tccaaaagtgcaattaagcctatt 26675372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 33338302 - 33338344
Alignment:
Q  12 gcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||||||||||||||| | |||||||||| ||||||||||    
T  33338302 gcaacttttagaaagataggggtccaaaagtgcaattaagcct 33338344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6768847 - 6768794
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||||||||||||  | |||||||||| |||||| |||||    
T  6768847 tccataaccgcaacttttagaaagataagggtccaaaagtgcaattaaacctat 6768794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 18988229 - 18988176
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||||    
T  18988229 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 18988176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24543004 - 24543053
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    ||||||||||||||||||||  |||||||| | |||||||||| ||||||    
T  24543004 gatccataactgcaacttttgaaaagataggggtccaaaagtgcaattaa 24543053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 29548227 - 29548174
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    ||||| ||||||||| ||||||||  | |||||||||| |||||||||||||||    
T  29548227 ataaccgcaacttttggaaagataagggtccaaaagtgcaattaagcctatttt 29548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 35364458 - 35364511
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| |||||||||   |||||||||| ||||||||||||    
T  35364458 tccataaccgcaacttttggaaagataggagtccaaaagtgcaattaagcctat 35364511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 37973560 - 37973511
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||| ||||    
T  37973560 ataaccgcaacttttagaaagataggggtccaaaagtgcaattaaaccta 37973511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 39136348 - 39136295
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||||    
T  39136348 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 39136295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50513097 - 50513044
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||||||||||||||||  ||||||||   |||||||||| ||||||||||    
T  50513097 gatccataactgcaacttttgaaaagataggagtccaaaagtgcaattaagcct 50513044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 232954 - 233006
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  232954 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 233006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 7119857 - 7119909
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  7119857 tccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccta 7119909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 7644507 - 7644455
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  7644507 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 7644455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8482909 - 8482853
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| |||||||||  ||| |||| | |||||||||| |||||||||||||||    
T  8482909 tccataaccgcaacttttgaaaaaataggggtccaaaagtgcaattaagcctatttt 8482853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 17262140 - 17262084
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| |||||||||  |||||||| | ||||| |||| |||||||||||||||    
T  17262140 tccataaccgcaacttttgaaaagatagtggtccaagagtgcaattaagcctatttt 17262084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 20472809 - 20472861
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||  |||||||||||    
T  20472809 tccataaccgcaacttttggaaagataggggtccaaaagtacaattaagccta 20472861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26171291 - 26171239
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||  |||||||  | |||||||||| |||||||||||    
T  26171291 tccataactgcaacttttgaaaagataagggtccaaaagtgcaattaagccta 26171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26675103 - 26675051
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | ||||||| || |||||||||||    
T  26675103 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagccta 26675051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 29548443 - 29548495
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||  |||||||| ||||||||| | |||||||||| |||||||||||    
T  29548443 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagccta 29548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 29627870 - 29627926
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||| | ||||||| || || ||||||||||||    
T  29627870 tccataaccgcaacttttggaaagataggggtccaaaaatgcaactaagcctatttt 29627926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30998233 - 30998181
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||||| || ||||||| | |||||||||    
T  30998233 tccataaccgcaacttttggaaagatagaggtctaaaagtgcagttaagccta 30998181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 31250732 - 31250784
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  31250732 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 31250784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 35083630 - 35083574
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    ||||||||  |||||||  ||||||||||| | |||||||| |||||||||||||||    
T  35083630 tccataaccccaactttcggaaagatagaggttcaaaagtgcaattaagcctatttt 35083574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 39332562 - 39332614
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||||| |||||||||| |||||||| | | |||||||| ||||||||||||    
T  39332562 ccataaccgcaacttttaaaaagataggggttcaaaagtgcaattaagcctat 39332614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 39668920 - 39668872
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||| |||| |||||||||||||||| |||||||||  |||||||||    
T  39668920 cataaccgcaatttttagaaagatagagatccaaaagtacaattaagcc 39668872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 47854243 - 47854295
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| |||| |||| | |||||||||| |||||||||||    
T  47854243 tccataaccgcaacttttggaaatataggggtccaaaagtgcaattaagccta 47854295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 54556664 - 54556612
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| |||| |||| | |||||||||| |||||||||||    
T  54556664 tccataaccgcaacttttggaaaaataggggtccaaaagtgcaattaagccta 54556612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 55586880 - 55586932
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||  ||||||||| | |||||||||| |||||||||||    
T  55586880 tccataaccgcaactttcggaaagataggggtccaaaagtgcaattaagccta 55586932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 7391740 - 7391794
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||    
T  7391740 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcctatt 7391794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29697106 - 29697160
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||||||||||||||| ||||||||| | |||||||||| |||||||||||||    
T  29697106 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcctatt 29697160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 2100428 - 2100376
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||| ||||||||| ||||||||||| |||||||||| |||||||||||||    
T  2100428 cataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcctatt 2100376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4405504 - 4405560
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  4405504 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 4405560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 6261640 - 6261696
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  6261640 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 6261696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 11614948 - 11614896
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  11614948 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagccta 11614896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 12257027 - 12257087
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaa 63  Q
    |||||||| ||||||||| |||||||| || |||||||||| ||||||||||| |||||||    
T  12257027 tccataaccgcaacttttggaaagataaaggtccaaaagtgcaattaagcctaatttaaaa 12257087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 1815239 - 1815290
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  1815239 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 1815290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 28563583 - 28563634
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  28563583 tccataaccgcaactttttgaaagatagaggtccaaaagtgcaattaagcct 28563634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 30239467 - 30239526
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaa 62  Q
    |||||||||||||||||| ||||||||| | || ||||||| |||||||||| |||||||    
T  30239467 tccataactgcaacttttggaaagataggggtctaaaagtgcaattaagccttttttaaa 30239526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 23883351 - 23883401
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  23883351 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcc 23883401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 34705639 - 34705689
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||    
T  34705639 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcc 34705689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 10894134 - 10894183
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||| ||||||||| ||||||||||| |||||||||| |||||||||    
T  10894134 ccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 10894183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 21009016 - 21009057
Alignment:
Q  13 caacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  21009016 caacttttggaaagatagaggtccaaaagtgtaattaagcct 21009057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11213446 - 11213498
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  11213446 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 11213498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 13042458 - 13042406
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  13042458 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 13042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 23291306 - 23291254
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  23291306 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 23291254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 28563377 - 28563325
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||| ||| | |||||||||| |||||||||||    
T  28563377 tccataaccgcaacttttagaaaggtaggggtccaaaagtgcaattaagccta 28563325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30965741 - 30965689
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||  |||||||| | |||||||||| |||||||||||    
T  30965741 tccataactgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 30965689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 31951464 - 31951516
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  31951464 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 31951516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3194697 - 3194751
Alignment:
Q  1 gatccataactgcaacttttagaaagata-gagctccaaaagtgtaattaagccta 55  Q
    |||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||    
T  3194697 gatccataaccgcaacttttagaaagatatgag-tccaaaagtgcaattaagccta 3194751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 3534847 - 3534800
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaag 51  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||||||    
T  3534847 ccataaccgcaacttttggaaagataggggtccaaaagtgtaattaag 3534800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 15273243 - 15273302
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaa 63  Q
    ||||||| |||||||||  |||||||| | |||||||||| |||||| ||||||||||||    
T  15273243 ccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaaacctattttaaaa 15273302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 26716635 - 26716686
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  26716635 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 26716686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 20630612 - 20630662
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| ||||||||| ||||||||||| || ||||||| |||||||||    
T  20630612 tccataaccgcaacttttggaaagatagaggtctaaaagtgcaattaagcc 20630662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 27771477 - 27771527
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    |||||||| |||||||||| |||||||  | ||||||||||||||||||||    
T  27771477 tccataaccgcaacttttaaaaagataagggtccaaaagtgtaattaagcc 27771527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 11322288 - 11322341
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| |||||||||  |||||||| | |||||||||| ||||||||||||    
T  11322288 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctat 11322341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 14997059 - 14997006
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | ||||||| || ||||||||||||    
T  14997059 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagcctat 14997006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 26479307 - 26479356
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||||||||||||| |||| |||| | |||||||||| |||||||||    
T  26479307 ccataactgcaacttttggaaaaatagggatccaaaagtgcaattaagcc 26479356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 27223572 - 27223625
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||||||  |||||||| ||||||||| | |||||||||| ||||||||||||    
T  27223572 tccataaccacaacttttggaaagataggggtccaaaagtgcaattaagcctat 27223625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5606346 - 5606294
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  5606346 tccataaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccta 5606294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 10255786 - 10255830
Alignment:
Q  6 ataactgcaacttttagaaagatagagctccaaaagtgtaattaa 50  Q
    |||||||||||||||| |||||||| | |||||||||| ||||||    
T  10255786 ataactgcaacttttaaaaagataggggtccaaaagtgcaattaa 10255830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11615162 - 11615214
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||| |||||||| |  ||||||||| |||||||||||    
T  11615162 tccataaccgcaacttttaaaaagatagggacccaaaagtgcaattaagccta 11615214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 16735828 - 16735880
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| |||| |||| | |||||||||| |||||||||||    
T  16735828 tccataaccgcaacttttggaaaaataggggtccaaaagtgcaattaagccta 16735880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 20080363 - 20080415
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    ||||||| |||||||||| |||||||| | |||||||||  ||||||||||||    
T  20080363 ccataaccgcaacttttacaaagataggggtccaaaagtacaattaagcctat 20080415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 81565 - 81622
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  81565 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttta 81622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12919 - 12972
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  12919 gatccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 12972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 79250 - 79302
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  79250 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 79302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 133 - 185
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  133 tccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagccta 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 13732430 - 13732482
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  13732430 tccataaccgcaacttttagaaagatagggatccaaaagtgcaattaagccta 13732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 19256852 - 19256908
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  19256852 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 19256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 33004759 - 33004703
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    ||||||||||||||||||  |||||||| | |||||||||| |||||||||||||||    
T  33004759 tccataactgcaacttttgaaaagataggggtccaaaagtgcaattaagcctatttt 33004703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 42445635 - 42445687
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  42445635 tccataaccgcaacttttagaaagatagggatccaaaagtgcaattaagccta 42445687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 3263084 - 3263033
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||||||||    
T  3263084 ccataaccgcaacttttagaaagataggggtccaaaagtgcaattaagccta 3263033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45127099 - 45127150
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||||||||||| ||||||||| | |||||||||| ||||||||||    
T  45127099 tccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcct 45127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 25430034 - 25430084
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||||||||||||| ||||||||| | |||||||||| ||||||||||    
T  25430034 ccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcct 25430084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 30218971 - 30219020
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  30218971 cataaccgcaacttttagaaagataggggtccaaaagtgcaattaagcct 30219020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34850921 - 34850970
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||||||||||||| ||||||||| | |||||||||| |||||||||    
T  34850921 ccataactgcaacttttggaaagataggggtccaaaagtgcaattaagcc 34850970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 41072091 - 41072148
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||| ||||||||| ||||||||| | ||||||| || ||||||||||||||||    
T  41072091 tccataaccgcaacttttggaaagataggggtccaaaaatgcaattaagcctatttta 41072148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 2937052 - 2937107
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||||||||||||||| ||||||| || |||||||||| ||||    
T  2937052 tccataaccgcaacttttagaaagatagaggtccaaaa-tgcaattaagcctttttt 2937107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 9484751 - 9484691
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattttaaaa 63  Q
    |||||||| ||||||||| ||||||||||| |  ||||||| ||||||| |||||||||||    
T  9484751 tccataaccgcaacttttggaaagatagaggtttaaaagtgcaattaagtctattttaaaa 9484691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 20436108 - 20436056
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||  |||||||| | |||||||||| |||||||||||    
T  20436108 tccataactgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 20436056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 24857933 - 24857877
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||| ||| ||||    
T  24857933 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaaacctttttt 24857877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 315267 - 315318
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||||||||||||  | |||||||||| |||||||||||    
T  315267 ccataaccgcaacttttagaaagatatgggtccaaaagtgcaattaagccta 315318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 25429971 - 25429920
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  25429971 ccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 25429920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 28217145 - 28217188
Alignment:
Q  12 gcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
T  28217145 gcaacttttagaaagatagggagccaaaagtgtaattaagccta 28217188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45395501 - 45395552
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||| |||| |||||||||||||| | |||||||||| ||||||||||    
T  45395501 tccataaccgcaatttttagaaagatagggatccaaaagtgcaattaagcct 45395552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 3263280 - 3263330
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    ||||||| ||||||||||||||||||| | |||||||||| || |||||||    
T  3263280 ccataaccgcaacttttagaaagataggggtccaaaagtgcaagtaagcct 3263330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19473125 - 19473076
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcc 53  Q
    ||||||| ||||||||||||||||||| | ||||||| || |||||||||    
T  19473125 ccataaccgcaacttttagaaagataggggtccaaaaatgcaattaagcc 19473076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 40324684 - 40324627
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttta 60  Q
    |||||||  |||||||||  |||||||| | |||||||||| ||||||||||||||||    
T  40324684 tccataatcgcaacttttgaaaagatagggatccaaaagtgcaattaagcctatttta 40324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 40445826 - 40445867
Alignment:
Q  13 caacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||||||||||| | |||||||||| ||||||||||    
T  40445826 caacttttagaaagataggggtccaaaagtgcaattaagcct 40445867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 41071879 - 41071826
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | | |||||||| ||||||||||||    
T  41071879 tccataaccgcaacttttggaaagataggggttcaaaagtgcaattaagcctat 41071826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 11366849 - 11366797
Alignment:
Q  3 tccataactgcaacttttagaaagatagagc-tccaaaagtgtaattaagcct 54  Q
    |||||||| ||||||||| ||||||||| |  |||||||||||||||||||||    
T  11366849 tccataaccgcaacttttggaaagatagggggtccaaaagtgtaattaagcct 11366797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 20436316 - 20436368
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  ||| |||| | ||||||||||||||||||||||    
T  20436316 tccataacagcaacttttgaaaaaataggggtccaaaagtgtaattaagccta 20436368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 24365135 - 24365187
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatt 57  Q
    |||||| ||||||||| ||||||||||| ||||||| || |||||| ||||||    
T  24365135 cataaccgcaacttttggaaagatagaggtccaaaaatgcaattaaacctatt 24365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 24895174 - 24895226
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| |||||||||  |||||||| | |||||||||| |||||||||||    
T  24895174 tccataaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccta 24895226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 25887944 - 25887892
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||  | |||||||||| |||||||||||    
T  25887944 tccataaccgcaacttttggaaagataagggtccaaaagtgcaattaagccta 25887892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 238889 - 238943
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctatttt 59  Q
    |||||| ||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  238889 cataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctatttt 238943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10198 - 10251
Alignment:
Q  1 gatccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcct 54  Q
    |||||||||| ||||||||||||||||||| | ||||||| || ||||||||||    
T  10198 gatccataaccgcaacttttagaaagataggggtccaaaaatgcaattaagcct 10251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 400754 - 400701
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctat 56  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||||||||||    
T  400754 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctat 400701  T

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Target: scaffold0922 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 96 - 148
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  96 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 148  T

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Target: scaffold0606 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 6918 - 6866
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  6918 tccataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 6866  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 1010 - 1062
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||||||||||||||| ||||||| |  |||||||||||    
T  1010 tccataaccgcaacttttagaaagatagagatccaaaaatacaattaagccta 1062  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 14568 - 14620
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||| ||||||||| ||||||||||| |||||||||| |||||| ||||    
T  14568 tccataaccgcaacttttggaaagatagaggtccaaaagtgcaattaaaccta 14620  T

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Target: scaffold0693 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 4786 - 4836
Alignment:
Q  5 cataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||| ||||||||| ||||||||| | |||||||||| |||||||||||    
T  4786 cataaccgcaacttttggaaagataggggtccaaaagtgcaattaagccta 4836  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 15823 - 15769
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaattaagcctattt 58  Q
    ||||||| ||||||||||||||||||  | |||||||||| |||||| |||||||    
T  15823 ccataaccgcaacttttagaaagataaggatccaaaagtgcaattaaacctattt 15769  T

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Target: scaffold1171 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1171
Description:

Target: scaffold1171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 869 - 817
Alignment:
Q  3 tccataactgcaacttttagaaagatagagctccaaaagtgtaattaagccta 55  Q
    |||||||  ||||||||| ||||||||| | |||||||||| |||||||||||    
T  869 tccataaacgcaacttttggaaagataggggtccaaaagtgcaattaagccta 817  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 26511 - 26555
Alignment:
Q  4 ccataactgcaacttttagaaagatagagctccaaaagtgtaatt 48  Q
    ||||||| ||||||||| ||||||||||| |||||||||| ||||    
T  26511 ccataaccgcaacttttggaaagatagaggtccaaaagtgcaatt 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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