View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1580_low_27 (Length: 316)

Name: NF1580_low_27
Description: NF1580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1580_low_27
NF1580_low_27
[»] chr6 (36 HSPs)
chr6 (4-307)||(5655344-5655647)
chr6 (122-200)||(2514645-2514722)
chr6 (278-316)||(3640512-3640550)
chr6 (282-316)||(19892310-19892344)
chr6 (282-316)||(34432831-34432865)
chr6 (282-315)||(30704962-30704995)
chr6 (280-316)||(743563-743599)
chr6 (121-193)||(2027455-2027526)
chr6 (149-204)||(2027880-2027935)
chr6 (282-316)||(607189-607223)
chr6 (282-316)||(2251840-2251874)
chr6 (282-316)||(3294766-3294800)
chr6 (282-316)||(3794207-3794241)
chr6 (282-316)||(4408360-4408394)
chr6 (282-316)||(7207846-7207880)
chr6 (282-316)||(7545331-7545365)
chr6 (282-316)||(7865389-7865423)
chr6 (282-316)||(8439677-8439711)
chr6 (282-316)||(9246416-9246450)
chr6 (282-316)||(9372235-9372269)
chr6 (282-316)||(9435628-9435662)
chr6 (282-316)||(10934601-10934635)
chr6 (282-316)||(15091450-15091484)
chr6 (282-316)||(17441873-17441907)
chr6 (282-316)||(19953862-19953896)
chr6 (278-316)||(28237286-28237324)
chr6 (282-316)||(30885604-30885638)
chr6 (282-316)||(32813684-32813718)
chr6 (282-316)||(33573819-33573853)
chr6 (155-200)||(781328-781373)
chr6 (274-303)||(9111038-9111067)
chr6 (267-316)||(9704404-9704453)
chr6 (283-316)||(28030867-28030900)
chr6 (284-316)||(15963977-15964009)
chr6 (283-315)||(31935102-31935134)
chr6 (284-316)||(32611588-32611620)
[»] chr5 (43 HSPs)
chr5 (121-198)||(35960359-35960434)
chr5 (282-316)||(12767966-12768000)
chr5 (282-316)||(36888429-36888463)
chr5 (276-316)||(20370158-20370198)
chr5 (277-316)||(18928717-18928756)
chr5 (282-316)||(1743129-1743163)
chr5 (282-316)||(4417719-4417753)
chr5 (282-316)||(4745910-4745944)
chr5 (282-316)||(6518810-6518844)
chr5 (282-316)||(8478927-8478961)
chr5 (282-316)||(8750935-8750969)
chr5 (282-316)||(8968751-8968785)
chr5 (282-316)||(9835035-9835069)
chr5 (282-316)||(11897250-11897284)
chr5 (282-316)||(12463758-12463792)
chr5 (282-316)||(12891559-12891593)
chr5 (282-316)||(16603400-16603434)
chr5 (281-315)||(16891347-16891381)
chr5 (282-316)||(17545206-17545240)
chr5 (282-316)||(21918054-21918088)
chr5 (282-316)||(25472617-25472651)
chr5 (282-316)||(25648119-25648153)
chr5 (278-316)||(27498582-27498620)
chr5 (282-316)||(27765259-27765293)
chr5 (282-316)||(32505690-32505724)
chr5 (282-316)||(35112996-35113030)
chr5 (282-316)||(35241398-35241432)
chr5 (282-316)||(35515514-35515548)
chr5 (282-316)||(39165019-39165053)
chr5 (282-316)||(41179837-41179871)
chr5 (282-316)||(42320319-42320353)
chr5 (282-315)||(4393858-4393891)
chr5 (279-312)||(7143413-7143446)
chr5 (282-315)||(23292452-23292485)
chr5 (283-316)||(29045890-29045923)
chr5 (275-316)||(32565516-32565557)
chr5 (147-200)||(37063149-37063201)
chr5 (280-316)||(6414068-6414104)
chr5 (276-316)||(6489000-6489040)
chr5 (284-316)||(8241054-8241086)
chr5 (284-316)||(16386775-16386807)
chr5 (270-302)||(24408482-24408514)
chr5 (276-316)||(34436844-34436884)
[»] chr7 (42 HSPs)
chr7 (122-199)||(17989073-17989149)
chr7 (278-316)||(3532576-3532614)
chr7 (278-316)||(12772113-12772151)
chr7 (267-316)||(9877301-9877350)
chr7 (283-316)||(39098139-39098172)
chr7 (120-200)||(2727408-2727487)
chr7 (280-316)||(30388541-30388577)
chr7 (121-200)||(1417207-1417285)
chr7 (282-316)||(2228977-2229011)
chr7 (282-316)||(2681098-2681132)
chr7 (274-316)||(5833033-5833075)
chr7 (282-316)||(10244923-10244957)
chr7 (282-316)||(12640623-12640657)
chr7 (282-316)||(15238891-15238925)
chr7 (282-316)||(19753002-19753036)
chr7 (282-316)||(23102592-23102626)
chr7 (282-316)||(24781032-24781066)
chr7 (282-316)||(25833557-25833591)
chr7 (282-316)||(27510291-27510325)
chr7 (282-316)||(29617407-29617441)
chr7 (282-316)||(35950130-35950164)
chr7 (282-316)||(36174392-36174426)
chr7 (282-316)||(36391938-36391972)
chr7 (282-316)||(36720109-36720143)
chr7 (282-316)||(37300133-37300167)
chr7 (282-316)||(41084041-41084075)
chr7 (282-316)||(42443691-42443725)
chr7 (282-316)||(44616604-44616638)
chr7 (282-316)||(47641047-47641081)
chr7 (282-316)||(47999782-47999816)
chr7 (274-307)||(7476717-7476750)
chr7 (283-316)||(7691875-7691908)
chr7 (283-316)||(24508829-24508862)
chr7 (283-316)||(32984251-32984284)
chr7 (122-186)||(9527140-9527203)
chr7 (277-309)||(13851975-13852007)
chr7 (276-316)||(26816692-26816732)
chr7 (284-316)||(28805304-28805336)
chr7 (284-316)||(32676976-32677008)
chr7 (283-315)||(38151347-38151379)
chr7 (284-316)||(46534782-46534814)
chr7 (283-315)||(48119473-48119505)
[»] chr2 (32 HSPs)
chr2 (278-315)||(16040239-16040276)
chr2 (278-316)||(15764928-15764966)
chr2 (282-316)||(19612717-19612751)
chr2 (278-316)||(28195168-28195206)
chr2 (278-316)||(44857268-44857306)
chr2 (284-316)||(31223624-31223656)
chr2 (275-309)||(2782999-2783033)
chr2 (282-316)||(3446732-3446766)
chr2 (282-316)||(4183178-4183212)
chr2 (282-316)||(8250335-8250369)
chr2 (282-316)||(18694787-18694821)
chr2 (282-316)||(19281610-19281644)
chr2 (282-316)||(19684075-19684109)
chr2 (282-316)||(22653678-22653712)
chr2 (282-316)||(25857329-25857363)
chr2 (282-316)||(27016279-27016313)
chr2 (282-316)||(27297177-27297211)
chr2 (282-316)||(33228967-33229001)
chr2 (282-316)||(34613981-34614015)
chr2 (282-316)||(36182644-36182678)
chr2 (282-316)||(38400312-38400346)
chr2 (282-316)||(41286133-41286167)
chr2 (282-316)||(41509518-41509552)
chr2 (282-316)||(44948598-44948632)
chr2 (282-315)||(1260187-1260220)
chr2 (283-316)||(6636001-6636034)
chr2 (272-316)||(6331554-6331598)
chr2 (284-316)||(8322810-8322842)
chr2 (276-316)||(20919606-20919646)
chr2 (284-316)||(30392866-30392898)
chr2 (276-316)||(32063616-32063656)
chr2 (160-200)||(37033987-37034027)
[»] chr8 (57 HSPs)
chr8 (281-316)||(26192750-26192785)
chr8 (271-316)||(12259-12304)
chr8 (282-315)||(11297028-11297061)
chr8 (284-316)||(7194266-7194298)
chr8 (160-200)||(31315540-31315580)
chr8 (281-316)||(22437824-22437859)
chr8 (277-316)||(45105693-45105732)
chr8 (282-316)||(94545-94579)
chr8 (282-316)||(1937312-1937346)
chr8 (282-316)||(2787115-2787149)
chr8 (282-316)||(4615710-4615744)
chr8 (282-316)||(8265270-8265304)
chr8 (282-316)||(8698614-8698648)
chr8 (278-316)||(10200715-10200753)
chr8 (282-316)||(10736908-10736942)
chr8 (282-316)||(11875888-11875922)
chr8 (282-316)||(11890895-11890929)
chr8 (282-316)||(16449127-16449161)
chr8 (282-316)||(17027914-17027948)
chr8 (282-316)||(17558350-17558384)
chr8 (282-316)||(17698524-17698558)
chr8 (282-316)||(23178925-23178959)
chr8 (282-316)||(23858199-23858233)
chr8 (282-316)||(26022249-26022283)
chr8 (278-316)||(28420458-28420496)
chr8 (282-316)||(28909467-28909501)
chr8 (282-316)||(29716862-29716896)
chr8 (282-316)||(29729120-29729154)
chr8 (282-316)||(30972851-30972885)
chr8 (282-316)||(32719641-32719675)
chr8 (282-316)||(34158691-34158725)
chr8 (282-316)||(34413064-34413098)
chr8 (282-316)||(35939489-35939523)
chr8 (282-316)||(38745313-38745347)
chr8 (282-316)||(39362267-39362301)
chr8 (282-316)||(41689884-41689918)
chr8 (282-316)||(43656038-43656072)
chr8 (282-316)||(43980347-43980381)
chr8 (282-316)||(44340379-44340413)
chr8 (283-316)||(197098-197131)
chr8 (283-316)||(311935-311968)
chr8 (282-315)||(10594251-10594284)
chr8 (275-316)||(23816782-23816823)
chr8 (283-316)||(27077131-27077164)
chr8 (275-316)||(33451377-33451418)
chr8 (283-316)||(42006781-42006814)
chr8 (160-200)||(1470943-1470983)
chr8 (160-200)||(14482145-14482185)
chr8 (152-200)||(25881549-25881597)
chr8 (121-193)||(27728070-27728141)
chr8 (272-316)||(27750932-27750976)
chr8 (160-200)||(36643958-36643998)
chr8 (280-316)||(38344049-38344085)
chr8 (160-200)||(39392748-39392788)
chr8 (276-316)||(39821877-39821917)
chr8 (280-316)||(41458295-41458331)
chr8 (148-200)||(41871938-41871990)
[»] chr1 (49 HSPs)
chr1 (281-316)||(42299547-42299582)
chr1 (278-316)||(27650695-27650733)
chr1 (278-316)||(37662591-37662629)
chr1 (282-315)||(45517303-45517336)
chr1 (276-316)||(29204641-29204681)
chr1 (276-316)||(41763183-41763223)
chr1 (121-200)||(17420146-17420224)
chr1 (124-199)||(21516317-21516391)
chr1 (268-303)||(35308170-35308205)
chr1 (272-315)||(48638524-48638567)
chr1 (282-316)||(1151761-1151795)
chr1 (282-316)||(1570226-1570260)
chr1 (282-316)||(2277756-2277790)
chr1 (282-316)||(3269621-3269655)
chr1 (282-316)||(4482632-4482666)
chr1 (282-316)||(6438098-6438132)
chr1 (282-316)||(6702578-6702612)
chr1 (282-316)||(7166261-7166295)
chr1 (282-316)||(8865856-8865890)
chr1 (282-316)||(9866218-9866252)
chr1 (282-316)||(10664828-10664862)
chr1 (282-316)||(11215003-11215037)
chr1 (282-316)||(15819635-15819669)
chr1 (282-316)||(16343030-16343064)
chr1 (282-316)||(21265658-21265692)
chr1 (282-316)||(22563388-22563422)
chr1 (282-316)||(24874973-24875007)
chr1 (282-316)||(25999852-25999886)
chr1 (282-316)||(26584780-26584814)
chr1 (282-316)||(32594253-32594287)
chr1 (282-316)||(33033128-33033162)
chr1 (282-316)||(33207207-33207241)
chr1 (282-316)||(33254730-33254764)
chr1 (282-316)||(33274902-33274936)
chr1 (282-316)||(34058216-34058250)
chr1 (282-316)||(35605657-35605691)
chr1 (282-316)||(40519578-40519612)
chr1 (282-316)||(42054335-42054369)
chr1 (282-316)||(42490444-42490478)
chr1 (282-316)||(46965742-46965776)
chr1 (278-316)||(47478882-47478920)
chr1 (282-316)||(50899544-50899578)
chr1 (282-315)||(6893272-6893305)
chr1 (275-316)||(8741468-8741509)
chr1 (283-316)||(13538480-13538513)
chr1 (284-316)||(27818573-27818605)
chr1 (288-316)||(45271774-45271802)
chr1 (283-315)||(46225390-46225422)
chr1 (288-316)||(50824444-50824472)
[»] chr4 (51 HSPs)
chr4 (121-195)||(4071830-4071903)
chr4 (282-316)||(4958590-4958624)
chr4 (278-316)||(21432612-21432650)
chr4 (283-316)||(8848246-8848279)
chr4 (164-200)||(30770826-30770862)
chr4 (280-316)||(39696371-39696407)
chr4 (282-316)||(3847683-3847717)
chr4 (282-316)||(6371116-6371150)
chr4 (282-316)||(8433657-8433691)
chr4 (282-316)||(8965096-8965130)
chr4 (160-198)||(10192229-10192267)
chr4 (278-316)||(12504677-12504715)
chr4 (282-316)||(22230468-22230502)
chr4 (282-316)||(22788708-22788742)
chr4 (282-316)||(23705187-23705221)
chr4 (282-316)||(24680120-24680154)
chr4 (282-316)||(26868351-26868385)
chr4 (282-316)||(26919502-26919536)
chr4 (282-316)||(30217601-30217635)
chr4 (282-316)||(34353781-34353815)
chr4 (282-316)||(35219534-35219568)
chr4 (282-316)||(37935863-37935897)
chr4 (282-316)||(39023177-39023211)
chr4 (282-316)||(40051624-40051658)
chr4 (282-316)||(40994137-40994171)
chr4 (282-316)||(43147418-43147452)
chr4 (282-316)||(43207671-43207705)
chr4 (282-316)||(43271751-43271785)
chr4 (282-316)||(43596897-43596931)
chr4 (282-316)||(43978010-43978044)
chr4 (282-316)||(45849049-45849083)
chr4 (282-316)||(46105537-46105571)
chr4 (282-316)||(46775064-46775098)
chr4 (282-316)||(47678627-47678661)
chr4 (282-316)||(48569210-48569244)
chr4 (282-316)||(49901484-49901518)
chr4 (282-316)||(55251385-55251419)
chr4 (283-316)||(17815459-17815492)
chr4 (159-200)||(21193941-21193982)
chr4 (282-315)||(24997469-24997502)
chr4 (283-316)||(25175164-25175197)
chr4 (282-315)||(35465437-35465470)
chr4 (282-315)||(38228439-38228472)
chr4 (283-312)||(40809219-40809248)
chr4 (282-315)||(44602487-44602520)
chr4 (282-315)||(48798281-48798314)
chr4 (272-316)||(4234319-4234363)
chr4 (160-200)||(40865753-40865793)
chr4 (280-316)||(47230939-47230975)
chr4 (276-316)||(50362167-50362207)
chr4 (284-316)||(53634285-53634317)
[»] chr3 (58 HSPs)
chr3 (278-316)||(17602710-17602748)
chr3 (122-204)||(23530234-23530316)
chr3 (278-316)||(30779601-30779639)
chr3 (282-316)||(34102645-34102679)
chr3 (282-316)||(34898801-34898835)
chr3 (282-316)||(52670187-52670221)
chr3 (277-316)||(4237013-4237052)
chr3 (273-316)||(37800645-37800688)
chr3 (277-316)||(44764719-44764758)
chr3 (273-316)||(45701337-45701380)
chr3 (282-316)||(882391-882425)
chr3 (278-316)||(2368934-2368972)
chr3 (282-316)||(2522928-2522962)
chr3 (282-316)||(3894546-3894580)
chr3 (282-316)||(4139002-4139036)
chr3 (282-312)||(4541900-4541930)
chr3 (278-316)||(5636833-5636871)
chr3 (282-316)||(6919997-6920031)
chr3 (282-316)||(7269957-7269991)
chr3 (282-316)||(7920322-7920356)
chr3 (282-316)||(8125641-8125675)
chr3 (282-316)||(9176620-9176654)
chr3 (282-316)||(13638279-13638313)
chr3 (282-316)||(19550508-19550542)
chr3 (282-316)||(19999869-19999903)
chr3 (282-316)||(22501965-22501999)
chr3 (282-316)||(28550353-28550387)
chr3 (282-316)||(30555261-30555295)
chr3 (282-316)||(31327535-31327569)
chr3 (282-316)||(31327752-31327786)
chr3 (282-316)||(34757531-34757565)
chr3 (282-316)||(34847545-34847579)
chr3 (282-316)||(39966108-39966142)
chr3 (282-316)||(40192158-40192192)
chr3 (282-316)||(40548305-40548339)
chr3 (282-316)||(40933865-40933899)
chr3 (282-316)||(44652016-44652050)
chr3 (286-316)||(45198729-45198759)
chr3 (282-316)||(47098734-47098768)
chr3 (282-316)||(50496848-50496882)
chr3 (282-316)||(52410275-52410309)
chr3 (282-316)||(52945897-52945931)
chr3 (282-316)||(53163596-53163630)
chr3 (282-316)||(53347324-53347358)
chr3 (160-200)||(1816525-1816566)
chr3 (282-315)||(11820006-11820039)
chr3 (275-316)||(11995126-11995167)
chr3 (283-316)||(15975155-15975188)
chr3 (282-315)||(32256589-32256622)
chr3 (282-315)||(46795964-46795997)
chr3 (282-315)||(48739779-48739812)
chr3 (282-315)||(52046420-52046453)
chr3 (283-316)||(52984013-52984046)
chr3 (275-307)||(9598431-9598463)
chr3 (284-316)||(17218492-17218524)
chr3 (284-316)||(31586951-31586983)
chr3 (284-316)||(36625205-36625237)
chr3 (160-192)||(48397597-48397629)
[»] scaffold0707 (1 HSPs)
scaffold0707 (282-316)||(54-88)
[»] scaffold0608 (1 HSPs)
scaffold0608 (282-316)||(8968-9002)
[»] scaffold0445 (1 HSPs)
scaffold0445 (282-316)||(4048-4082)
[»] scaffold0366 (1 HSPs)
scaffold0366 (282-316)||(894-928)
[»] scaffold0157 (1 HSPs)
scaffold0157 (278-316)||(15762-15800)
[»] scaffold0128 (1 HSPs)
scaffold0128 (282-316)||(17622-17656)
[»] scaffold0121 (2 HSPs)
scaffold0121 (278-316)||(11992-12030)
scaffold0121 (282-316)||(46528-46562)
[»] scaffold0100 (1 HSPs)
scaffold0100 (282-316)||(45886-45920)
[»] scaffold0088 (1 HSPs)
scaffold0088 (282-316)||(10860-10894)
[»] scaffold0085 (2 HSPs)
scaffold0085 (138-188)||(34063-34112)
scaffold0085 (278-315)||(27965-28002)
[»] scaffold0038 (1 HSPs)
scaffold0038 (278-316)||(37448-37486)
[»] scaffold0024 (1 HSPs)
scaffold0024 (282-316)||(59785-59819)
[»] scaffold0014 (1 HSPs)
scaffold0014 (282-316)||(12295-12329)
[»] scaffold0010 (1 HSPs)
scaffold0010 (282-316)||(236389-236423)
[»] scaffold0009 (1 HSPs)
scaffold0009 (282-316)||(266731-266765)
[»] scaffold0006 (1 HSPs)
scaffold0006 (278-316)||(59212-59250)
[»] scaffold0002 (1 HSPs)
scaffold0002 (282-316)||(8859-8893)
[»] scaffold0275 (1 HSPs)
scaffold0275 (282-315)||(8823-8856)
[»] scaffold0025 (1 HSPs)
scaffold0025 (283-316)||(65821-65854)


Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-157; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 4 - 307
Target Start/End: Complemental strand, 5655647 - 5655344
Alignment:
4 gatgtcgaagaaaatacctaaaatgacttatttgggtttatctattgacgaaagtatttgtgaggatgtttagacgcacttgtaaaagcagtttatgaca 103  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
5655647 gatgttgaaaaaaatacctaaaatgacttatttaggtttatctattgacgaaagtatttgtgaggatgtttagacgcacttgtaaaagcaatttatgaca 5655548  T
104 tgtccatgaattattgttagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttatacgta 203  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5655547 tgtccatgaattattgttagcttatgataacaaattatagttaatatgaaaattattttgactttattgtatcttttattataaaaatagtttatacgta 5655448  T
204 acgtaatcacttactttctccgttcatttttctaaggacctctaaaaaatttcatatattaagaaaaattattgtcctcgtgagcttagttcagttggta 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
5655447 acgtaatcacttactttctccgttcatttttctaaggacctctaaaaaatttcatatattaagaaaaattattgtcctcgtgagcttagctcagttggta 5655348  T
304 ggga 307  Q
    ||||    
5655347 ggga 5655344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 2514722 - 2514645
Alignment:
122 agcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    ||||||||| || || |||||| | |||| ||||||| |||||||||||| |||||||||||||| |||||| ||||||    
2514722 agcttatgaaaataacttatagctcatat-aaaattagtttgactttattttatcttttattatagaaatagcttatac 2514645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 3640512 - 3640550
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
3640512 tcctcgtgagcttagctcagttggtagggatattgcata 3640550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 19892344 - 19892310
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
19892344 cgtgagcttagttcagttggtagggatattgcata 19892310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 34432865 - 34432831
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
34432865 cgtgagcttagttcagttggtagggatattgcata 34432831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 30704962 - 30704995
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||||||||||||||||||||||||    
30704962 cgtgagcttagttcagttggtagggatattgcat 30704995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 743563 - 743599
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||| |||||||||||||||||||||||    
743563 ctcgtgagcttagctcagttggtagggatattgcata 743599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 2027455 - 2027526
Alignment:
121 tagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatag 193  Q
    |||||||||| ||||  |||||| | |||||||||| | |||||||||||| |||||||| ||||||||||||    
2027455 tagcttatgagaacagcttataggttatatgaaaat-agtttgactttattttatcttttgttataaaaatag 2027526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 2027880 - 2027935
Alignment:
149 atgaaaattattttgactttattgtatcttttattataaaaatagtttatacgtaa 204  Q
    |||||||  |||||||||||||| ||||||||| || |||||||| ||||||||||    
2027880 atgaaaacaattttgactttattttatcttttaatacaaaaatagcttatacgtaa 2027935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 607189 - 607223
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
607189 cgtgagcttagctcagttggtagggatattgcata 607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 2251840 - 2251874
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
2251840 cgtgagcttagctcagttggtagggatattgcata 2251874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 3294766 - 3294800
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
3294766 cgtgagcttagctcagttggtagggatattgcata 3294800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 3794241 - 3794207
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
3794241 cgtgagcttagctcagttggtagggatattgcata 3794207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 4408360 - 4408394
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4408360 cgtgagcttagctcagttggtagggatattgcata 4408394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 7207846 - 7207880
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
7207846 cgtgagcttagctcagttggtagggatattgcata 7207880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 7545331 - 7545365
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
7545331 cgtgagcttagctcagttggtagggatattgcata 7545365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 7865423 - 7865389
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
7865423 cgtgagcttagctcagttggtagggatattgcata 7865389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8439677 - 8439711
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8439677 cgtgagcttagctcagttggtagggatattgcata 8439711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 9246450 - 9246416
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
9246450 cgtgagcttagctcagttggtagggatattgcata 9246416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 9372269 - 9372235
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
9372269 cgtgagcttagctcagttggtagggatattgcata 9372235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 9435628 - 9435662
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
9435628 cgtgagcttagctcagttggtagggatattgcata 9435662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 10934601 - 10934635
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
10934601 cgtgagcttagctcagttggtagggatattgcata 10934635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 15091450 - 15091484
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
15091450 cgtgagcttagctcagttggtagggatattgcata 15091484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 17441907 - 17441873
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
17441907 cgtgagcttagctcagttggtagggatattgcata 17441873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 19953896 - 19953862
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
19953896 cgtgagcttagctcagttggtagggatattgcata 19953862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 28237324 - 28237286
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||  |||||||||||||||||||||||    
28237324 tcctcgtgagcttaactcagttggtagggatattgcata 28237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 30885638 - 30885604
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
30885638 cgtgagcttagctcagttggtagggatattgcata 30885604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 32813718 - 32813684
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||| ||||||||||||    
32813718 cgtgagcttagttcagttggtacggatattgcata 32813684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 33573819 - 33573853
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
33573819 cgtgagcttagctcagttggtagggatattgcata 33573853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 781373 - 781328
Alignment:
155 attattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||| |||||||| |||||||||||||| |||||| ||||||    
781373 attatttttactttattttatcttttattatagaaatagcttatac 781328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 303
Target Start/End: Original strand, 9111038 - 9111067
Alignment:
274 attgtcctcgtgagcttagttcagttggta 303  Q
    ||||||||||||||||||||||||||||||    
9111038 attgtcctcgtgagcttagttcagttggta 9111067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 9704404 - 9704453
Alignment:
267 aaaaattattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| |||| ||| ||||| ||||| |||||||||||||||||||||||    
9704404 aaaaaatattatccccgtgaacttagctcagttggtagggatattgcata 9704453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 28030867 - 28030900
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
28030867 gtgagcttagctcagttggtagggatattgcata 28030900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 15964009 - 15963977
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
15964009 tgagcttagctcagttggtagggatattgcata 15963977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 31935102 - 31935134
Alignment:
283 gtgagcttagttcagttggtagggatattgcat 315  Q
    |||||||||| ||||||||||||||||||||||    
31935102 gtgagcttagctcagttggtagggatattgcat 31935134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 32611620 - 32611588
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
32611620 tgagcttagctcagttggtagggatattgcata 32611588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 35960434 - 35960359
Alignment:
121 tagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttat 198  Q
    |||||||||| | ||| |||||||| ||||||||  || |||||||||||| |||||||||||||| |||||||||||    
35960434 tagcttatgaaatcaacttatagtttatatgaaa--tagtttgactttattttatcttttattatagaaatagtttat 35960359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 12767966 - 12768000
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
12767966 cgtgagcttagttcagttggtagggatattgcata 12768000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 36888463 - 36888429
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
36888463 cgtgagcttagttcagttggtagggatattgcata 36888429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 20370198 - 20370158
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
20370198 tgtcctcgtgagcttagctcagttggtagggataatgcata 20370158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 18928717 - 18928756
Alignment:
277 gtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| |||||||||| |||||||||||||||||||||||    
18928717 gtccttgtgagcttagctcagttggtagggatattgcata 18928756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 1743129 - 1743163
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
1743129 cgtgagcttagctcagttggtagggatattgcata 1743163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 4417753 - 4417719
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4417753 cgtgagcttagctcagttggtagggatattgcata 4417719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 4745944 - 4745910
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4745944 cgtgagcttagctcagttggtagggatattgcata 4745910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 6518844 - 6518810
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
6518844 cgtgagcttagctcagttggtagggatattgcata 6518810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 8478961 - 8478927
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||||||||||||||||||||||||||||    
8478961 cgtgagtttagttcagttggtagggatattgcata 8478927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 8750969 - 8750935
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||| |||||||||||||||||||||    
8750969 cgtgagcttagttaagttggtagggatattgcata 8750935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8968751 - 8968785
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8968751 cgtgagcttagctcagttggtagggatattgcata 8968785  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 9835035 - 9835069
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
9835035 cgtgagcttagctcagttggtagggatattgcata 9835069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 11897250 - 11897284
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
11897250 cgtgagcttagctcagttggtagggatattgcata 11897284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 12463758 - 12463792
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
12463758 cgtgagcttagctcagttggtagggatattgcata 12463792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 12891559 - 12891593
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
12891559 cgtgagcttagctcagttggtagggatattgcata 12891593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 16603400 - 16603434
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
16603400 cgtgagcttagctcagttggtagggatattgcata 16603434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 315
Target Start/End: Original strand, 16891347 - 16891381
Alignment:
281 tcgtgagcttagttcagttggtagggatattgcat 315  Q
    |||||||||||| ||||||||||||||||||||||    
16891347 tcgtgagcttagctcagttggtagggatattgcat 16891381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 17545240 - 17545206
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
17545240 cgtgagcttagctcagttggtagggatattgcata 17545206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 21918054 - 21918088
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
21918054 cgtgagcttagctcagttggtagggatattgcata 21918088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 25472651 - 25472617
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
25472651 cgtgagcttagctcagttggtagggatattgcata 25472617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 25648153 - 25648119
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
25648153 cgtgagcttagctcagttggtagggatattgcata 25648119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 27498582 - 27498620
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| || ||||||||||||||||||||    
27498582 tcctcgtgagcttagctcggttggtagggatattgcata 27498620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 27765259 - 27765293
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
27765259 cgtgagcttagctcagttggtagggatattgcata 27765293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 32505690 - 32505724
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
32505690 cgtgagcttagctcagttggtagggatattgcata 32505724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 35113030 - 35112996
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||| |||||||||||||||    
35113030 cgtgagcttagttcagttgatagggatattgcata 35112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 35241398 - 35241432
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||| |||||||||||    
35241398 cgtgagcttagttcagttggtagagatattgcata 35241432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 35515514 - 35515548
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
35515514 cgtgagcttagctcagttggtagggatattgcata 35515548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 39165019 - 39165053
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||||||||||||||||||||||||||||    
39165019 cgtgagtttagttcagttggtagggatattgcata 39165053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 41179871 - 41179837
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
41179871 cgtgagcttagctcagttggtagggatattgcata 41179837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 42320319 - 42320353
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
42320319 cgtgagcttagctcagttggtagggatattgcata 42320353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 4393858 - 4393891
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||||||||||||||||| ||||||    
4393858 cgtgagcttagttcagttggtagggatgttgcat 4393891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 7143413 - 7143446
Alignment:
279 cctcgtgagcttagttcagttggtagggatattg 312  Q
    |||||||||||||||||| |||||||||||||||    
7143413 cctcgtgagcttagttcaattggtagggatattg 7143446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 23292485 - 23292452
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
23292485 cgtgagcttagctcagttggtagggatattgcat 23292452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 29045890 - 29045923
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| ||||||||||||||||||||||||||||    
29045890 gtgagtttagttcagttggtagggatattgcata 29045923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 32565516 - 32565557
Alignment:
275 ttgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||| |||| ||||||||||| ||||||    
32565516 ttgtcctcgtgagcttagctcagctggtagggataatgcata 32565557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 37063149 - 37063201
Alignment:
147 atatgaaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||| | |||||||||||| |||||||| ||||| |||||||||||||    
37063149 atatgaaaat-agtttgactttattttatcttttgttatagaaatagtttatac 37063201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 6414068 - 6414104
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||  |||||||||||||||||||||||    
6414068 ctcgtgagcttaactcagttggtagggatattgcata 6414104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 6489000 - 6489040
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||| | ||||||    
6489000 tgtcctcgtgagcttagctcagttggtagggacaatgcata 6489040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 8241054 - 8241086
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
8241054 tgagcttagctcagttggtagggatattgcata 8241086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 16386807 - 16386775
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
16386807 tgagcttagctcagttggtagggatattgcata 16386775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 24408482 - 24408514
Alignment:
270 aattattgtcctcgtgagcttagttcagttggt 302  Q
    ||||||||||||||||||||||| |||||||||    
24408482 aattattgtcctcgtgagcttagctcagttggt 24408514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 34436844 - 34436884
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||| | ||||||    
34436844 tgtcctcgtgagcttagctcagttggtagggacaatgcata 34436884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 17989073 - 17989149
Alignment:
122 agcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttata 199  Q
    ||||||||| |||||||||||||| |||||||||  | |||||||||||| ||| |||| |||||||| |||||||||    
17989073 agcttatgaaaacaaattatagtttatatgaaaa-cagtttgactttattttatattttgttataaaactagtttata 17989149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 3532576 - 3532614
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||||||||    
3532576 tcctcgtgatcttagttcagttggtagggatattgcata 3532614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 12772113 - 12772151
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
12772113 tcctcgtgagcttagctcagttggtagggatattgcata 12772151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 9877350 - 9877301
Alignment:
267 aaaaattattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||| | ||| ||||||||||| |||||||||||||||||||||||    
9877350 aaaaattaatatccccgtgagcttagctcagttggtagggatattgcata 9877301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 39098139 - 39098172
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||||||||||    
39098139 gtgagcttagttcagttggtagggatattgcata 39098172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 2727408 - 2727487
Alignment:
120 ttagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    ||||||||| | ||||| ||||||||||||||||||  | |||| ||||||| |||||||| ||||| ||||||| |||||    
2727408 ttagcttataaaaacaatttatagttgatatgaaaa-gagtttgcctttattttatcttttgttatagaaatagtctatac 2727487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 30388577 - 30388541
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||| |||||||||||||||||||||||    
30388577 ctcgtgagcttagctcagttggtagggatattgcata 30388541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 1417285 - 1417207
Alignment:
121 tagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||| ||||| |||| | | |||||||||  |||| ||||||||| |||||||| ||||| |||||||||||||    
1417285 tagcttatgaaaacaacttattgcttatatgaaaacaattt-gactttattttatcttttgttatataaatagtttatac 1417207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 2228977 - 2229011
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
2228977 cgtgagcttagctcagttggtagggatattgcata 2229011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 2681098 - 2681132
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
2681098 cgtgagcttagctcagttggtagggatattgcata 2681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 5833033 - 5833075
Alignment:
274 attgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||    
5833033 attgtccccgtgagcttagctcagttggtagggataatgcata 5833075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 10244957 - 10244923
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
10244957 cgtgagcttagctcagttggtagggatattgcata 10244923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 12640657 - 12640623
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
12640657 cgtgagcttagctcagttggtagggatattgcata 12640623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 15238891 - 15238925
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
15238891 cgtgagcttagctcagttggtagggatattgcata 15238925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 19753036 - 19753002
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
19753036 cgtgagcttagctcagttggtagggatattgcata 19753002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 23102626 - 23102592
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
23102626 cgtgagcttagctcagttggtagggatattgcata 23102592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 24781032 - 24781066
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
24781032 cgtgagcttagctcagttggtagggatattgcata 24781066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 25833557 - 25833591
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
25833557 cgtgagcttagctcagttggtagggatattgcata 25833591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 27510325 - 27510291
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
27510325 cgtgagcttagctcagttggtagggatattgcata 27510291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 29617407 - 29617441
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
29617407 cgtgagcttagctcagttggtagggatattgcata 29617441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 35950130 - 35950164
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
35950130 cgtgagcttagctcagttggtagggatattgcata 35950164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 36174392 - 36174426
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
36174392 cgtgagcttagctcagttggtagggatattgcata 36174426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 36391972 - 36391938
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
36391972 cgtgagcttagctcagttggtagggatattgcata 36391938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 36720109 - 36720143
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
36720109 cgtgagcttagctcagttggtagggatattgcata 36720143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 37300167 - 37300133
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
37300167 cgtgagcttagctcagttggtagggatattgcata 37300133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 41084041 - 41084075
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
41084041 cgtgagcttagctcagttggtagggatattgcata 41084075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 42443691 - 42443725
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
42443691 cgtgagcttagctcagttggtagggatattgcata 42443725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 44616604 - 44616638
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
44616604 cgtgagcttagctcagttggtagggatattgcata 44616638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 47641047 - 47641081
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
47641047 cgtgagcttagctcagttggtagggatattgcata 47641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 47999782 - 47999816
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
47999782 cgtgagcttagctcagttggtagggatattgcata 47999816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 7476717 - 7476750
Alignment:
274 attgtcctcgtgagcttagttcagttggtaggga 307  Q
    ||||||||||||||||||| ||||||||||||||    
7476717 attgtcctcgtgagcttagatcagttggtaggga 7476750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 7691875 - 7691908
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| ||||||||||||||||||||||||||||    
7691875 gtgagtttagttcagttggtagggatattgcata 7691908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 24508829 - 24508862
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| |||||||||||||||||||||||||||    
24508829 gtgagcgtagttcagttggtagggatattgcata 24508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 32984284 - 32984251
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
32984284 gtgagcttagctcagttggtagggatattgcata 32984251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 9527140 - 9527203
Alignment:
122 agcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattata 186  Q
    ||||||||| ||||| |||||||| |||||||||  | |||||||||||| |||||||| |||||    
9527140 agcttatgaaaacaacttatagtttatatgaaaac-agtttgactttattatatcttttgttata 9527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 13852007 - 13851975
Alignment:
277 gtcctcgtgagcttagttcagttggtagggata 309  Q
    |||||||||||||||| ||||||||||||||||    
13852007 gtcctcgtgagcttagctcagttggtagggata 13851975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 26816732 - 26816692
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
26816732 tgtccccgtgagcttagctcagttggtagggataatgcata 26816692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 28805304 - 28805336
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
28805304 tgagcttagctcagttggtagggatattgcata 28805336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 32677008 - 32676976
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
32677008 tgagcttagctcagttggtagggatattgcata 32676976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 38151347 - 38151379
Alignment:
283 gtgagcttagttcagttggtagggatattgcat 315  Q
    |||||||||| ||||||||||||||||||||||    
38151347 gtgagcttagctcagttggtagggatattgcat 38151379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 46534814 - 46534782
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
46534814 tgagcttagctcagttggtagggatattgcata 46534782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 48119473 - 48119505
Alignment:
283 gtgagcttagttcagttggtagggatattgcat 315  Q
    |||||||||| ||||||||||||||||||||||    
48119473 gtgagcttagctcagttggtagggatattgcat 48119505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 16040239 - 16040276
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||||||||||||||||||||||||||||    
16040239 tcctcgtgagcttagttcagttggtagggatattgcat 16040276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 15764928 - 15764966
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
15764928 tcctcgtgagcttagctcagttggtagggatattgcata 15764966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 19612717 - 19612751
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
19612717 cgtgagcttagttcagttggtagggatattgcata 19612751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 28195206 - 28195168
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
28195206 tcctcgtgagcttagctcagttggtagggatattgcata 28195168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 44857306 - 44857268
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
44857306 tcctcgtgagcttagctcagttggtagggatattgcata 44857268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 31223624 - 31223656
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||    
31223624 tgagcttagttcagttggtagggatattgcata 31223656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 2782999 - 2783033
Alignment:
275 ttgtcctcgtgagcttagttcagttggtagggata 309  Q
    |||||||||||||||||||||||||||||| ||||    
2782999 ttgtcctcgtgagcttagttcagttggtagagata 2783033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 3446732 - 3446766
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
3446732 cgtgagcttagctcagttggtagggatattgcata 3446766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 4183178 - 4183212
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4183178 cgtgagcttagctcagttggtagggatattgcata 4183212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 8250369 - 8250335
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8250369 cgtgagcttagctcagttggtagggatattgcata 8250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 18694787 - 18694821
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
18694787 cgtgagcttagctcagttggtagggatattgcata 18694821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 19281610 - 19281644
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
19281610 cgtgagcttagctcagttggtagggatattgcata 19281644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 19684075 - 19684109
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
19684075 cgtgagcttagctcagttggtagggatattgcata 19684109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 22653712 - 22653678
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
22653712 cgtgagcttagctcagttggtagggatattgcata 22653678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 25857363 - 25857329
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
25857363 cgtgagcttagctcagttggtagggatattgcata 25857329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 27016279 - 27016313
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||| ||||||||||||    
27016279 cgtgagcttagttcagttggtatggatattgcata 27016313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 27297177 - 27297211
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
27297177 cgtgagcttagctcagttggtagggatattgcata 27297211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 33229001 - 33228967
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
33229001 cgtgagcttagctcagttggtagggatattgcata 33228967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 34613981 - 34614015
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
34613981 cgtgagcttagctcagttggtagggatattgcata 34614015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 36182644 - 36182678
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
36182644 cgtgagcttagctcagttggtagggatattgcata 36182678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 38400312 - 38400346
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
38400312 cgtgagcttagctcagttggtagggatattgcata 38400346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 41286133 - 41286167
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||||    
41286133 cgtgagcttggttcagttggtagggatattgcata 41286167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 41509518 - 41509552
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
41509518 cgtgagcttagctcagttggtagggatattgcata 41509552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 44948598 - 44948632
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
44948598 cgtgagcttagctcagttggtagggatattgcata 44948632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 1260187 - 1260220
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
1260187 cgtgagcttagctcagttggtagggatattgcat 1260220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 6636034 - 6636001
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
6636034 gtgagcttagctcagttggtagggatattgcata 6636001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 6331554 - 6331598
Alignment:
272 ttattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| ||| ||||||| ||| |||||||||||||||||||||||    
6331554 ttattatccccgtgagcatagctcagttggtagggatattgcata 6331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 8322810 - 8322842
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||| |||||||||    
8322810 tgagcttagttcagttggtaggggtattgcata 8322842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 20919606 - 20919646
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
20919606 tgtccccgtgagcttagctcagttggtagggacattgcata 20919646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 30392898 - 30392866
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
30392898 tgagcttagctcagttggtagggatattgcata 30392866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 32063656 - 32063616
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
32063656 tgtcctcgtgagcttagctcagttggtatggataatgcata 32063616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 37034027 - 37033987
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
37034027 tttgactttattttatctttttttatagaaatagtttatac 37033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 316
Target Start/End: Complemental strand, 26192785 - 26192750
Alignment:
281 tcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||||||||||||    
26192785 tcgtgagcttagttcagttggtagggatattgcata 26192750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 12304 - 12259
Alignment:
271 attattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
12304 attattatccccgtgagcttagctcagttggtagggatattgcata 12259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 11297061 - 11297028
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||||||||||||||||||||||||    
11297061 cgtgagcttagttcagttggtagggatattgcat 11297028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 7194266 - 7194298
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||    
7194266 tgagcttagttcagttggtagggatattgcata 7194298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 31315540 - 31315580
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
31315540 tttgactttattttatcttttattataaaaatagcttatac 31315580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 281 - 316
Target Start/End: Complemental strand, 22437859 - 22437824
Alignment:
281 tcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||| |||||||||||||||||||||||    
22437859 tcgtgagcttagctcagttggtagggatattgcata 22437824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 45105693 - 45105732
Alignment:
277 gtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||| |||||||||||||||| ||||||    
45105693 gtcctcgtgagcttagctcagttggtagggataatgcata 45105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 94579 - 94545
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
94579 cgtgagcttagctcagttggtagggatattgcata 94545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 1937312 - 1937346
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
1937312 cgtgagcttagctcagttggtagggatattgcata 1937346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 2787149 - 2787115
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
2787149 cgtgagcttagctcagttggtagggatattgcata 2787115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 4615744 - 4615710
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||||||||||||||||||||||||||||    
4615744 cgtgagtttagttcagttggtagggatattgcata 4615710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8265270 - 8265304
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8265270 cgtgagcttagctcagttggtagggatattgcata 8265304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 8698648 - 8698614
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8698648 cgtgagcttagctcagttggtagggatattgcata 8698614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 10200753 - 10200715
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| ||||||||||| |||||||||||    
10200753 tcctcgtgagcttagctcagttggtagagatattgcata 10200715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 10736942 - 10736908
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
10736942 cgtgagcttagctcagttggtagggatattgcata 10736908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 11875888 - 11875922
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
11875888 cgtgagcttagctcagttggtagggatattgcata 11875922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 11890895 - 11890929
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
11890895 cgtgagcttagctcagttggtagggatattgcata 11890929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 16449127 - 16449161
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
16449127 cgtgagcttagctcagttggtagggatattgcata 16449161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 17027948 - 17027914
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
17027948 cgtgagcttagctcagttggtagggatattgcata 17027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 17558384 - 17558350
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
17558384 cgtgagcttagctcagttggtagggatattgcata 17558350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 17698524 - 17698558
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
17698524 cgtgagcttagctcagttggtagggatattgcata 17698558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 23178959 - 23178925
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
23178959 cgtgagcttagctcagttggtagggatattgcata 23178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 23858199 - 23858233
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
23858199 cgtgagcttagctcagttggtagggatattgcata 23858233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 26022249 - 26022283
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
26022249 cgtgagcttagctcagttggtagggatattgcata 26022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 28420496 - 28420458
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||| ||||||||||    
28420496 tcctcgtgagcttagctcagttggtaggaatattgcata 28420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 28909467 - 28909501
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
28909467 cgtgagcttagctcagttggtagggatattgcata 28909501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 29716862 - 29716896
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
29716862 cgtgagcttagctcagttggtagggatattgcata 29716896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 29729120 - 29729154
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||||||||||||||||||||||||||||    
29729120 cgtgagtttagttcagttggtagggatattgcata 29729154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 30972885 - 30972851
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
30972885 cgtgagcttagctcagttggtagggatattgcata 30972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 32719675 - 32719641
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
32719675 cgtgagcttagctcagttggtagggatattgcata 32719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 34158725 - 34158691
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
34158725 cgtgagcttagctcagttggtagggatattgcata 34158691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 34413064 - 34413098
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
34413064 cgtgagcttagctcagttggtagggatattgcata 34413098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 35939489 - 35939523
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
35939489 cgtgagcttagctcagttggtagggatattgcata 35939523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 38745347 - 38745313
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
38745347 cgtgagcttagctcagttggtagggatattgcata 38745313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 39362267 - 39362301
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
39362267 cgtgagcttagctcagttggtagggatattgcata 39362301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 41689884 - 41689918
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
41689884 cgtgagcttagctcagttggtagggatattgcata 41689918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 43656038 - 43656072
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
43656038 cgtgagcttagctcagttggtagggatattgcata 43656072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 43980381 - 43980347
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||| |||||||||||||||    
43980381 cgtgagcttagttcagttgttagggatattgcata 43980347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 44340413 - 44340379
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
44340413 cgtgagcttagctcagttggtagggatattgcata 44340379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 197131 - 197098
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
197131 gtgagcttagctcagttggtagggatattgcata 197098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 311968 - 311935
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
311968 gtgagcttagctcagttggtagggatattgcata 311935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 10594284 - 10594251
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||| ||||||||||||||||||||    
10594284 cgtgagcttagtttagttggtagggatattgcat 10594251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 23816782 - 23816823
Alignment:
275 ttgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
23816782 ttgtcctcgtgagcttagctcagttggtaaggataatgcata 23816823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 27077164 - 27077131
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
27077164 gtgagcttagctcagttggtagggatattgcata 27077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 33451418 - 33451377
Alignment:
275 ttgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
33451418 ttgtcctcgtgagcttagctcagttggtatggataatgcata 33451377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 42006781 - 42006814
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
42006781 gtgagcttagctcagttggtagggatattgcata 42006814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 1470943 - 1470983
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||||| |||||||||||||| |||||| ||||||    
1470943 tttgactttattttatcttttattatagaaatagcttatac 1470983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 14482185 - 14482145
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
14482185 tttgactttattttatcttttgttatagaaatagtttatac 14482145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 25881549 - 25881597
Alignment:
152 aaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    ||||||| |||||||||||| ||| ||||  ||||||||||||||||||    
25881549 aaaattagtttgactttattttatgttttgctataaaaatagtttatac 25881597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 27728070 - 27728141
Alignment:
121 tagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatag 193  Q
    |||||||||| ||||| | ||| || |||||||||| | |||||||||||| |||||||| ||||| ||||||    
27728070 tagcttatgaaaacaactaatactttatatgaaaat-agtttgactttattttatctttttttatagaaatag 27728141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 27750976 - 27750932
Alignment:
272 ttattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||| |||||||||| ||| | ||||||    
27750976 ttattgtcctcgtgagcttagctcagttggtaaggacagtgcata 27750932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 36643958 - 36643998
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||| |||||||||||||||| |||||| ||||||    
36643958 tttgactttactgtatcttttattatagaaatagcttatac 36643998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 38344049 - 38344085
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||  |||||||||||||||||||||||    
38344049 ctcgtgagcttaactcagttggtagggatattgcata 38344085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 39392748 - 39392788
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
39392748 tttgactttattttatcttttgttatagaaatagtttatac 39392788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 39821877 - 39821917
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||| | ||||||    
39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcata 39821917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 41458295 - 41458331
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||  |||||||||||||||||||||||    
41458295 ctcgtgagcttaactcagttggtagggatattgcata 41458331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 41871990 - 41871938
Alignment:
148 tatgaaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||  || |||||||||| |||||||| |||| ||||||||||||||    
41871990 tatgaaaatcgttctgactttattttatcttttgttattaaaatagtttatac 41871938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 316
Target Start/End: Complemental strand, 42299582 - 42299547
Alignment:
281 tcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||||||||||||    
42299582 tcgtgagcttagttcagttggtagggatattgcata 42299547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 27650695 - 27650733
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||| ||||||||||||||||||||||||||    
27650695 tcctcgtgagctaagttcagttggtagggatattgcata 27650733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 37662629 - 37662591
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
37662629 tcctcgtgagcttagctcagttggtagggatattgcata 37662591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 45517336 - 45517303
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||||||||||||||||||||||||    
45517336 cgtgagcttagttcagttggtagggatattgcat 45517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 29204641 - 29204681
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
29204641 tgtcctcgtgagcttagctcagttggtagggacattgcata 29204681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 41763223 - 41763183
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
41763223 tgtcctcgtgagcttagctcagttggtagggataatgcata 41763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 17420224 - 17420146
Alignment:
121 tagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttatac 200  Q
    ||||||| || ||||  |||||| | ||||||||||| ||  ||||||||| |||||||| |||||||||||||||||||    
17420224 tagcttacgaaaacagtttatagcttatatgaaaattgttc-gactttattttatcttttcttataaaaatagtttatac 17420146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 21516391 - 21516317
Alignment:
124 cttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttata 199  Q
    ||||||| || || || ||||| ||||||||| ||||| ||||| ||| |||||||| ||||||||||||||||||    
21516391 cttatgaaaataacttctagtttatatgaaaactattt-gacttcattttatcttttcttataaaaatagtttata 21516317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 303
Target Start/End: Original strand, 35308170 - 35308205
Alignment:
268 aaaattattgtcctcgtgagcttagttcagttggta 303  Q
    |||||| |||||||||||||||||||||||||||||    
35308170 aaaattgttgtcctcgtgagcttagttcagttggta 35308205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 315
Target Start/End: Original strand, 48638524 - 48638567
Alignment:
272 ttattgtcctcgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||    
48638524 ttattatccccgtgagcttagctcagttggtagggatattgcat 48638567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 1151761 - 1151795
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
1151761 cgtgagcttagctcagttggtagggatattgcata 1151795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 1570260 - 1570226
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
1570260 cgtgagcttagctcagttggtagggatattgcata 1570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 2277756 - 2277790
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
2277756 cgtgagcttagctcagttggtagggatattgcata 2277790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 3269621 - 3269655
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
3269621 cgtgagcttagctcagttggtagggatattgcata 3269655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 4482666 - 4482632
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4482666 cgtgagcttagctcagttggtagggatattgcata 4482632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 6438132 - 6438098
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
6438132 cgtgagcttagctcagttggtagggatattgcata 6438098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 6702578 - 6702612
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
6702578 cgtgagcttagctcagttggtagggatattgcata 6702612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 7166295 - 7166261
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
7166295 cgtgagcttagctcagttggtagggatattgcata 7166261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8865856 - 8865890
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8865856 cgtgagcttagctcagttggtagggatattgcata 8865890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 9866252 - 9866218
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
9866252 cgtgagcttagctcagttggtagggatattgcata 9866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 10664862 - 10664828
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
10664862 cgtgagcttagctcagttggtagggatattgcata 10664828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 11215003 - 11215037
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
11215003 cgtgagcttagctcagttggtagggatattgcata 11215037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 15819669 - 15819635
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
15819669 cgtgagcttagctcagttggtagggatattgcata 15819635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 16343030 - 16343064
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
16343030 cgtgagcttagctcagttggtagggatattgcata 16343064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 21265658 - 21265692
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
21265658 cgtgagcttagctcagttggtagggatattgcata 21265692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 22563388 - 22563422
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
22563388 cgtgagcttagctcagttggtagggatattgcata 22563422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 24874973 - 24875007
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
24874973 cgtgagcttagctcagttggtagggatattgcata 24875007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 25999852 - 25999886
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
25999852 cgtgagcttagctcagttggtagggatattgcata 25999886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 26584814 - 26584780
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
26584814 cgtgagcttagctcagttggtagggatattgcata 26584780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 32594253 - 32594287
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
32594253 cgtgagcttagctcagttggtagggatattgcata 32594287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 33033128 - 33033162
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| ||||||||||||||||||||||||    
33033128 cgtgagcttaattcagttggtagggatattgcata 33033162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 33207207 - 33207241
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
33207207 cgtgagcttagctcagttggtagggatattgcata 33207241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 33254730 - 33254764
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
33254730 cgtgagcttagctcagttggtagggatattgcata 33254764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 33274902 - 33274936
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
33274902 cgtgagcttagctcagttggtagggatattgcata 33274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 34058216 - 34058250
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
34058216 cgtgagcttagctcagttggtagggatattgcata 34058250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 35605691 - 35605657
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
35605691 cgtgagcttagctcagttggtagggatattgcata 35605657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 40519612 - 40519578
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
40519612 cgtgagcttagctcagttggtagggatattgcata 40519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 42054335 - 42054369
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
42054335 cgtgagcttagctcagttggtagggatattgcata 42054369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 42490478 - 42490444
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
42490478 cgtgagcttagctcagttggtagggatattgcata 42490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 46965742 - 46965776
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
46965742 cgtgagcttagctcagttggtagggatattgcata 46965776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 47478920 - 47478882
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||  |||||||||||||||||||||||    
47478920 tcctcgtgagcttaactcagttggtagggatattgcata 47478882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 50899578 - 50899544
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
50899578 cgtgagcttagctcagttggtagggatattgcata 50899544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 6893305 - 6893272
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
6893305 cgtgagcttagctcagttggtagggatattgcat 6893272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 8741468 - 8741509
Alignment:
275 ttgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| |||||||||||||||||||||||||| ||| ||||    
8741468 ttgtccccgtgagcttagttcagttggtagggacattacata 8741509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 13538513 - 13538480
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||| |||||||||||||||||||||||||||||    
13538513 gtgaacttagttcagttggtagggatattgcata 13538480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 27818573 - 27818605
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
27818573 tgagcttagctcagttggtagggatattgcata 27818605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 45271774 - 45271802
Alignment:
288 cttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||    
45271774 cttagttcagttggtagggatattgcata 45271802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 46225390 - 46225422
Alignment:
283 gtgagcttagttcagttggtagggatattgcat 315  Q
    |||||||||| ||||||||||||||||||||||    
46225390 gtgagcttagctcagttggtagggatattgcat 46225422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 50824472 - 50824444
Alignment:
288 cttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||    
50824472 cttagttcagttggtagggatattgcata 50824444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 4071903 - 4071830
Alignment:
121 tagcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtt 195  Q
    |||||||| ||||||| |||||| | |||||||||| |||| ||||||||| |||||||| ||||| ||||||||    
4071903 tagcttatcataacaacttatagcttatatgaaaataattt-gactttattttatcttttgttatagaaatagtt 4071830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 4958624 - 4958590
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
4958624 cgtgagcttagttcagttggtagggatattgcata 4958590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 21432612 - 21432650
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||| |||||||||||    
21432612 tcctcgtgagcttagttcagttggtagagatattgcata 21432650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 8848279 - 8848246
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||||||||||    
8848279 gtgagcttagttcagttggtagggatattgcata 8848246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 30770862 - 30770826
Alignment:
164 actttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||| ||||||||||||||||||||||||||||    
30770862 actttattttatcttttattataaaaatagtttatac 30770826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 39696407 - 39696371
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||| |||||||||||||||||||||||    
39696407 ctcgtgagcttagctcagttggtagggatattgcata 39696371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 3847683 - 3847717
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
3847683 cgtgagcttagctcagttggtagggatattgcata 3847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 6371116 - 6371150
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
6371116 cgtgagcttagctcagttggtagggatattgcata 6371150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 8433691 - 8433657
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8433691 cgtgagcttagctcagttggtagggatattgcata 8433657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8965096 - 8965130
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8965096 cgtgagcttagctcagttggtagggatattgcata 8965130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 10192267 - 10192229
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttat 198  Q
    |||||||||||| |||||||| |||||||||||||||||    
10192267 tttgactttattctatcttttgttataaaaatagtttat 10192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 12504715 - 12504677
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||  |||||||||||||||||||||||    
12504715 tcctcgtgagcttatctcagttggtagggatattgcata 12504677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 22230502 - 22230468
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
22230502 cgtgagcttagctcagttggtagggatattgcata 22230468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 22788742 - 22788708
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
22788742 cgtgagcttagctcagttggtagggatattgcata 22788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 23705221 - 23705187
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
23705221 cgtgagcttagctcagttggtagggatattgcata 23705187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 24680154 - 24680120
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
24680154 cgtgagcttagctcagttggtagggatattgcata 24680120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 26868351 - 26868385
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
26868351 cgtgagcttagctcagttggtagggatattgcata 26868385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 26919536 - 26919502
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
26919536 cgtgagcttagctcagttggtagggatattgcata 26919502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 30217601 - 30217635
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
30217601 cgtgagcttagctcagttggtagggatattgcata 30217635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 34353781 - 34353815
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
34353781 cgtgagcttagctcagttggtagggatattgcata 34353815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 35219568 - 35219534
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
35219568 cgtgagcttagctcagttggtagggatattgcata 35219534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 37935863 - 37935897
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
37935863 cgtgagcttagctcagttggtagggatattgcata 37935897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 39023177 - 39023211
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
39023177 cgtgagcttagctcagttggtagggatattgcata 39023211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 40051624 - 40051658
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
40051624 cgtgagcttagctcagttggtagggatattgcata 40051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 40994171 - 40994137
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
40994171 cgtgagcttagctcagttggtagggatattgcata 40994137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 43147452 - 43147418
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
43147452 cgtgagcttagctcagttggtagggatattgcata 43147418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 43207671 - 43207705
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
43207671 cgtgagcttagctcagttggtagggatattgcata 43207705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 43271785 - 43271751
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||| |||||||||||||||    
43271785 cgtgagcttagttcagttgatagggatattgcata 43271751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 43596897 - 43596931
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
43596897 cgtgagcttagctcagttggtagggatattgcata 43596931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 43978010 - 43978044
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
43978010 cgtgagcttagctcagttggtagggatattgcata 43978044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 45849049 - 45849083
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
45849049 cgtgagcttagctcagttggtagggatattgcata 45849083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 46105537 - 46105571
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
46105537 cgtgagcttagctcagttggtagggatattgcata 46105571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 46775098 - 46775064
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
46775098 cgtgagcttagctcagttggtagggatattgcata 46775064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 47678661 - 47678627
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||| ||||||||    
47678661 cgtgagcttagttcagttggtagggacattgcata 47678627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 48569244 - 48569210
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
48569244 cgtgagcttagctcagttggtagggatattgcata 48569210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 49901484 - 49901518
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
49901484 cgtgagcttagctcagttggtagggatattgcata 49901518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 55251419 - 55251385
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
55251419 cgtgagcttagctcagttggtagggatattgcata 55251385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 17815492 - 17815459
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||||| ||||    
17815492 gtgagcttagttcagttggtagggatattacata 17815459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 21193982 - 21193941
Alignment:
159 ttttgactttattgtatcttttattataaaaatagtttatac 200  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
21193982 ttttgactttattttatcttttactataaaaatagcttatac 21193941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 24997502 - 24997469
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
24997502 cgtgagcttagctcagttggtagggatattgcat 24997469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 25175197 - 25175164
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||||||||||||||| ||||    
25175197 gtgagcttagttcagttggtagggatattacata 25175164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 35465437 - 35465470
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
35465437 cgtgagcttagctcagttggtagggatattgcat 35465470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 38228439 - 38228472
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
38228439 cgtgagcttagatcagttggtagggatattgcat 38228472  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 312
Target Start/End: Complemental strand, 40809248 - 40809219
Alignment:
283 gtgagcttagttcagttggtagggatattg 312  Q
    ||||||||||||||||||||||||||||||    
40809248 gtgagcttagttcagttggtagggatattg 40809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 44602487 - 44602520
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
44602487 cgtgagcttagctcagttggtagggatattgcat 44602520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 48798281 - 48798314
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
48798281 cgtgagcttagctcagttggtagggatattgcat 48798314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 4234363 - 4234319
Alignment:
272 ttattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||| ||| ||||||||||| ||||||| |||||||||||||||    
4234363 ttattatccccgtgagcttagctcagttgatagggatattgcata 4234319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 40865793 - 40865753
Alignment:
160 tttgactttattgtatcttttattataaaaatagtttatac 200  Q
    |||||||||||| |||||||| ||| |||||||||||||||    
40865793 tttgactttattctatcttttgttagaaaaatagtttatac 40865753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 47230975 - 47230939
Alignment:
280 ctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||| ||||||||||| |||||||||||    
47230975 ctcgtgagcttagctcagttggtagagatattgcata 47230939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 50362207 - 50362167
Alignment:
276 tgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||||| |||||||||||||| | ||||||    
50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcata 50362167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 53634317 - 53634285
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||| ||||||||||||||||    
53634317 tgagcttagttcagttcgtagggatattgcata 53634285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 17602748 - 17602710
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
17602748 tcctcgtgagcttagctcagttggtagggatattgcata 17602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 23530234 - 23530316
Alignment:
122 agcttatgataacaaattatagttgatatgaaaattattttgactttattgtatcttttattataaaaatagtttatacgtaa 204  Q
    ||||||||| ||||| ||||| || ||||||||| || |||||||||||| |||||||| ||| |||| ||| || |||||||    
23530234 agcttatgaaaacaacttatactttatatgaaaaataatttgactttattttatcttttgttagaaaactagcttctacgtaa 23530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 30779639 - 30779601
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| |||||||||||||||||||||||    
30779639 tcctcgtgagcttagctcagttggtagggatattgcata 30779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 34102679 - 34102645
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
34102679 cgtgagcttagttcagttggtagggatattgcata 34102645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 34898835 - 34898801
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
34898835 cgtgagcttagttcagttggtagggatattgcata 34898801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 52670221 - 52670187
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||||||    
52670221 cgtgagcttagttcagttggtagggatattgcata 52670187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 4237052 - 4237013
Alignment:
277 gtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||| |||||||||||||||||||||||||| ||||||||    
4237052 gtccccgtgagcttagttcagttggtagggacattgcata 4237013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 37800688 - 37800645
Alignment:
273 tattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
37800688 tattatccccgtgagcttagctcagttggtagggatattgcata 37800645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 44764719 - 44764758
Alignment:
277 gtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||| |||||||||||||| ||||||||    
44764719 gtcctcgtgagcttagctcagttggtagggacattgcata 44764758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 45701337 - 45701380
Alignment:
273 tattgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
45701337 tattatccccgtgagcttagctcagttggtagggatattgcata 45701380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 882391 - 882425
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
882391 cgtgagcttagctcagttggtagggatattgcata 882425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 2368934 - 2368972
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||| ||||||| |||||||||||||||    
2368934 tcctcgtgagcttagctcagttgttagggatattgcata 2368972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 2522928 - 2522962
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
2522928 cgtgagcttagctcagttggtagggatattgcata 2522962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 3894546 - 3894580
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||| ||||||||||||    
3894546 cgtgagcttagttcagttggtatggatattgcata 3894580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 4139002 - 4139036
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4139002 cgtgagcttagctcagttggtagggatattgcata 4139036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 312
Target Start/End: Original strand, 4541900 - 4541930
Alignment:
282 cgtgagcttagttcagttggtagggatattg 312  Q
    |||||||||||||||||||||||||||||||    
4541900 cgtgagcttagttcagttggtagggatattg 4541930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 5636871 - 5636833
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||| |||||||||| |||||||||||||||||||||||    
5636871 tccttgtgagcttagctcagttggtagggatattgcata 5636833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 6920031 - 6919997
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
6920031 cgtgagcttagctcagttggtagggatattgcata 6919997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 7269957 - 7269991
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
7269957 cgtgagcttagctcagttggtagggatattgcata 7269991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 7920322 - 7920356
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
7920322 cgtgagcttagctcagttggtagggatattgcata 7920356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8125641 - 8125675
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8125641 cgtgagcttagctcagttggtagggatattgcata 8125675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 9176654 - 9176620
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
9176654 cgtgagcttagctcagttggtagggatattgcata 9176620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 13638313 - 13638279
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||| ||||    
13638313 cgtgagcttagttcagttggtagggatattacata 13638279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 19550508 - 19550542
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
19550508 cgtgagcttagctcagttggtagggatattgcata 19550542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 19999869 - 19999903
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
19999869 cgtgagcttagctcagttggtagggatattgcata 19999903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 22501999 - 22501965
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
22501999 cgtgagcttagctcagttggtagggatattgcata 22501965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 28550387 - 28550353
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
28550387 cgtgagcttagctcagttggtagggatattgcata 28550353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 30555295 - 30555261
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
30555295 cgtgagcttagctcagttggtagggatattgcata 30555261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 31327569 - 31327535
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
31327569 cgtgagcttagctcagttggtagggatattgcata 31327535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 31327786 - 31327752
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
31327786 cgtgagcttagctcagttggtagggatattgcata 31327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 34757531 - 34757565
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
34757531 cgtgagcttagctcagttggtagggatattgcata 34757565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 34847545 - 34847579
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| ||||||||||||||||||||||||    
34847545 cgtgagcttaattcagttggtagggatattgcata 34847579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 39966142 - 39966108
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
39966142 cgtgagcttagctcagttggtagggatattgcata 39966108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 40192158 - 40192192
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
40192158 cgtgagcttagctcagttggtagggatattgcata 40192192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 40548305 - 40548339
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
40548305 cgtgagcttagctcagttggtagggatattgcata 40548339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 40933899 - 40933865
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
40933899 cgtgagcttagctcagttggtagggatattgcata 40933865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 44652050 - 44652016
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
44652050 cgtgagcttagctcagttggtagggatattgcata 44652016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 316
Target Start/End: Original strand, 45198729 - 45198759
Alignment:
286 agcttagttcagttggtagggatattgcata 316  Q
    |||||||||||||||||||||||||||||||    
45198729 agcttagttcagttggtagggatattgcata 45198759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 47098734 - 47098768
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
47098734 cgtgagcttagctcagttggtagggatattgcata 47098768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 50496882 - 50496848
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
50496882 cgtgagcttagctcagttggtagggatattgcata 50496848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 52410309 - 52410275
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
52410309 cgtgagcttagctcagttggtagggatattgcata 52410275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 52945897 - 52945931
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
52945897 cgtgagcttagctcagttggtagggatattgcata 52945931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 53163596 - 53163630
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
53163596 cgtgagcttagctcagttggtagggatattgcata 53163630  T

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Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 53347358 - 53347324
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
53347358 cgtgagcttagctcagttggtagggatattgcata 53347324  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 1816566 - 1816525
Alignment:
160 tttgactttattgtatcttttattata-aaaatagtttatac 200  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
1816566 tttgactttattttatcttttattataaaaaatagtttatac 1816525  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 11820006 - 11820039
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
11820006 cgtgagcttagctcagttggtagggatattgcat 11820039  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 11995126 - 11995167
Alignment:
275 ttgtcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||||||||||||||||||| |||||| ||||||||    
11995126 ttgtccccgtgagcttagttcagttgatagggacattgcata 11995167  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 15975155 - 15975188
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
15975155 gtgagcttagctcagttggtagggatattgcata 15975188  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 32256622 - 32256589
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
32256622 cgtgagcttagctcagttggtagggatattgcat 32256589  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 46795997 - 46795964
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
46795997 cgtgagcttagctcagttggtagggatattgcat 46795964  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 48739812 - 48739779
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
48739812 cgtgagcttagctcagttggtagggatattgcat 48739779  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 52046453 - 52046420
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
52046453 cgtgagcttagctcagttggtagggatattgcat 52046420  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 52984013 - 52984046
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
52984013 gtgagcttagctcagttggtagggatattgcata 52984046  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 9598431 - 9598463
Alignment:
275 ttgtcctcgtgagcttagttcagttggtaggga 307  Q
    |||||||||||||||||||||||||||| ||||    
9598431 ttgtcctcgtgagcttagttcagttggttggga 9598463  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 17218492 - 17218524
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
17218492 tgagcttagctcagttggtagggatattgcata 17218524  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 31586951 - 31586983
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
31586951 tgagcttagctcagttggtagggatattgcata 31586983  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 36625237 - 36625205
Alignment:
284 tgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| |||||||||||||||||||||||    
36625237 tgagcttagctcagttggtagggatattgcata 36625205  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 48397629 - 48397597
Alignment:
160 tttgactttattgtatcttttattataaaaata 192  Q
    |||||||||||| ||||||||||||||||||||    
48397629 tttgactttattttatcttttattataaaaata 48397597  T

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Target: scaffold0707 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 88 - 54
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
88 cgtgagcttagctcagttggtagggatattgcata 54  T

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Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 8968 - 9002
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8968 cgtgagcttagctcagttggtagggatattgcata 9002  T

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Target: scaffold0445 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 4082 - 4048
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
4082 cgtgagcttagctcagttggtagggatattgcata 4048  T

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Target: scaffold0366 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 928 - 894
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
928 cgtgagcttagctcagttggtagggatattgcata 894  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 15762 - 15800
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||  |||||||||||||||||||||||    
15762 tcctcgtgagcttatctcagttggtagggatattgcata 15800  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 17622 - 17656
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
17622 cgtgagcttagctcagttggtagggatattgcata 17656  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 11992 - 12030
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||| ||||| |||||||||||||||||||||||    
11992 tcctcgtgaacttagctcagttggtagggatattgcata 12030  T

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Target: scaffold0121; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 46528 - 46562
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
46528 cgtgagcttagctcagttggtagggatattgcata 46562  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 45886 - 45920
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
45886 cgtgagcttagctcagttggtagggatattgcata 45920  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 10894 - 10860
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
10894 cgtgagcttagctcagttggtagggatattgcata 10860  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 34063 - 34112
Alignment:
138 ttatagttgatatgaaaattattttgactttattgtatcttttattataaa 188  Q
    |||||||| |||||||||| |||| ||||||||| ||||||||||||||||    
34063 ttatagttcatatgaaaataattt-gactttattttatcttttattataaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 28002 - 27965
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||||||| || |||||||||||||||||||    
28002 tcctcgtgagcttagctcggttggtagggatattgcat 27965  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 37486 - 37448
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||||||  |||||||||||||||||||||||    
37486 tcctcgtgagcttaactcagttggtagggatattgcata 37448  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 59785 - 59819
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
59785 cgtgagcttagctcagttggtagggatattgcata 59819  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 12329 - 12295
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
12329 cgtgagcttagctcagttggtagggatattgcata 12295  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 236423 - 236389
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| ||||||||||||||||||||||||||||    
236423 cgtgagattagttcagttggtagggatattgcata 236389  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 266765 - 266731
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
266765 cgtgagcttagctcagttggtagggatattgcata 266731  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 59250 - 59212
Alignment:
278 tcctcgtgagcttagttcagttggtagggatattgcata 316  Q
    |||||| |||||||||||||||||||| |||||||||||    
59250 tcctcgcgagcttagttcagttggtagagatattgcata 59212  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 8893 - 8859
Alignment:
282 cgtgagcttagttcagttggtagggatattgcata 316  Q
    ||||||||||| |||||||||||||||||||||||    
8893 cgtgagcttagctcagttggtagggatattgcata 8859  T

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Target: scaffold0275 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 315
Target Start/End: Original strand, 8823 - 8856
Alignment:
282 cgtgagcttagttcagttggtagggatattgcat 315  Q
    ||||||||||| ||||||||||||||||||||||    
8823 cgtgagcttagctcagttggtagggatattgcat 8856  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 65854 - 65821
Alignment:
283 gtgagcttagttcagttggtagggatattgcata 316  Q
    |||||||||| |||||||||||||||||||||||    
65854 gtgagcttagctcagttggtagggatattgcata 65821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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