View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15814_low_25 (Length: 206)
Name: NF15814_low_25
Description: NF15814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15814_low_25 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 4297523 - 4297561
Alignment:
| Q |
160 |
caatagagtctacacatacacatgtagaaactgatgatg |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4297523 |
caatagagtctacacatacacatgtagaaactcatgatg |
4297561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 4288929 - 4288957
Alignment:
| Q |
160 |
caatagagtctacacatacacatgtagaa |
188 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4288929 |
caatagagtctacacatacacatgtagaa |
4288957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University