View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15815_high_5 (Length: 361)

Name: NF15815_high_5
Description: NF15815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15815_high_5
NF15815_high_5
[»] chr2 (26 HSPs)
chr2 (11-361)||(39338860-39339210)
chr2 (11-361)||(10523833-10524187)
chr2 (16-245)||(7874145-7874372)
chr2 (37-227)||(14106545-14106734)
chr2 (38-207)||(1269373-1269542)
chr2 (39-303)||(17105205-17105470)
chr2 (20-143)||(387128-387250)
chr2 (16-134)||(14405162-14405279)
chr2 (16-86)||(4471934-4472004)
chr2 (38-113)||(25504931-25505006)
chr2 (19-144)||(13337227-13337352)
chr2 (16-86)||(16959993-16960063)
chr2 (38-86)||(22885155-22885203)
chr2 (38-86)||(33788654-33788702)
chr2 (37-209)||(37770662-37770833)
chr2 (53-225)||(41086825-41086994)
chr2 (40-86)||(31902438-31902484)
chr2 (16-85)||(2062901-2062970)
chr2 (38-86)||(23650396-23650444)
chr2 (38-86)||(15126432-15126480)
chr2 (43-86)||(27739986-27740029)
chr2 (48-86)||(4162052-4162090)
chr2 (16-189)||(10173578-10173751)
chr2 (40-82)||(18681080-18681122)
chr2 (259-292)||(7695873-7695906)
chr2 (45-86)||(36276200-36276241)
[»] chr1 (33 HSPs)
chr1 (11-361)||(30685899-30686249)
chr1 (11-351)||(31585755-31586095)
chr1 (11-316)||(41920234-41920538)
chr1 (11-361)||(46692814-46693164)
chr1 (11-322)||(5389416-5389727)
chr1 (18-361)||(24449932-24450277)
chr1 (18-361)||(20113523-20113866)
chr1 (16-361)||(24684478-24684821)
chr1 (16-245)||(24658783-24659010)
chr1 (19-237)||(7857515-7857731)
chr1 (38-245)||(38544760-38544965)
chr1 (16-207)||(46814467-46814656)
chr1 (11-118)||(5459140-5459247)
chr1 (38-191)||(9313311-9313463)
chr1 (16-245)||(32864561-32864791)
chr1 (38-235)||(17033449-17033645)
chr1 (22-134)||(27031846-27031958)
chr1 (18-86)||(19598647-19598715)
chr1 (38-144)||(27102143-27102250)
chr1 (16-235)||(50589207-50589423)
chr1 (38-87)||(46603402-46603451)
chr1 (42-86)||(30655571-30655615)
chr1 (43-135)||(42374125-42374217)
chr1 (38-121)||(6583238-6583321)
chr1 (42-86)||(15840938-15840982)
chr1 (43-86)||(4651791-4651834)
chr1 (174-225)||(10785489-10785540)
chr1 (38-189)||(16147464-16147614)
chr1 (159-209)||(6583333-6583383)
chr1 (48-86)||(38564912-38564950)
chr1 (42-191)||(34774779-34774925)
chr1 (259-343)||(46814709-46814794)
chr1 (48-84)||(13987634-13987670)
[»] chr7 (36 HSPs)
chr7 (9-361)||(47325878-47326230)
chr7 (11-361)||(38305997-38306347)
chr7 (16-361)||(3419656-3420002)
chr7 (11-293)||(5860283-5860565)
chr7 (19-361)||(10243923-10244260)
chr7 (11-361)||(37794737-37795075)
chr7 (16-361)||(25160552-25160896)
chr7 (16-293)||(3866921-3867197)
chr7 (17-344)||(33434863-33435189)
chr7 (20-186)||(41089752-41089918)
chr7 (16-298)||(34389760-34390043)
chr7 (38-244)||(6716758-6716963)
chr7 (41-225)||(8745026-8745209)
chr7 (16-117)||(6584889-6584990)
chr7 (16-216)||(35745827-35746025)
chr7 (38-185)||(11379149-11379295)
chr7 (38-235)||(13311701-13311898)
chr7 (28-298)||(16954452-16954722)
chr7 (60-239)||(44755486-44755663)
chr7 (45-207)||(42533281-42533442)
chr7 (38-191)||(1320701-1320853)
chr7 (38-144)||(24324820-24324926)
chr7 (18-131)||(23983162-23983274)
chr7 (38-82)||(12480901-12480945)
chr7 (28-144)||(16828948-16829064)
chr7 (38-114)||(3478335-3478411)
chr7 (43-86)||(38485567-38485610)
chr7 (40-86)||(9349760-9349806)
chr7 (40-86)||(46133302-46133348)
chr7 (11-68)||(44353559-44353616)
chr7 (28-86)||(35206705-35206763)
chr7 (48-86)||(46262151-46262189)
chr7 (49-86)||(2570171-2570208)
chr7 (39-87)||(9428128-9428176)
chr7 (38-86)||(47457044-47457092)
chr7 (42-86)||(48058680-48058724)
[»] chr4 (29 HSPs)
chr4 (18-361)||(30964177-30964520)
chr4 (11-361)||(4305461-4305811)
chr4 (16-361)||(8254763-8255108)
chr4 (16-361)||(8268181-8268526)
chr4 (38-215)||(53823443-53823619)
chr4 (18-189)||(30167566-30167736)
chr4 (16-196)||(25753074-25753253)
chr4 (45-191)||(39421042-39421187)
chr4 (38-225)||(22811182-22811367)
chr4 (38-209)||(31050684-31050853)
chr4 (16-191)||(2825691-2825864)
chr4 (38-235)||(46698807-46699002)
chr4 (38-209)||(19815246-19815416)
chr4 (38-208)||(19672991-19673159)
chr4 (42-144)||(48098286-48098388)
chr4 (38-135)||(38637254-38637350)
chr4 (38-86)||(6599967-6600015)
chr4 (155-235)||(12296038-12296118)
chr4 (38-82)||(16501746-16501790)
chr4 (38-135)||(2061760-2061857)
chr4 (38-86)||(35800500-35800548)
chr4 (42-86)||(39041300-39041344)
chr4 (39-86)||(21387227-21387274)
chr4 (16-86)||(28966878-28966948)
chr4 (16-86)||(38929838-38929908)
chr4 (48-86)||(40813813-40813851)
chr4 (38-144)||(49747481-49747586)
chr4 (42-114)||(19311369-19311439)
chr4 (26-86)||(36962626-36962685)
[»] chr8 (23 HSPs)
chr8 (11-361)||(37986853-37987204)
chr8 (11-361)||(24995390-24995740)
chr8 (11-305)||(34389000-34389294)
chr8 (11-301)||(9519295-9519585)
chr8 (11-361)||(32066290-32066640)
chr8 (16-361)||(36630573-36630918)
chr8 (146-330)||(31210320-31210505)
chr8 (18-149)||(31207364-31207494)
chr8 (16-245)||(15821379-15821606)
chr8 (38-282)||(10248575-10248818)
chr8 (11-129)||(16457456-16457572)
chr8 (11-118)||(12898269-12898376)
chr8 (38-207)||(17657024-17657191)
chr8 (38-135)||(30236150-30236247)
chr8 (40-135)||(10552231-10552325)
chr8 (11-89)||(41893396-41893473)
chr8 (38-86)||(15906697-15906745)
chr8 (40-86)||(35062468-35062514)
chr8 (11-68)||(20138455-20138512)
chr8 (175-235)||(10552133-10552192)
chr8 (38-82)||(17720728-17720771)
chr8 (42-86)||(23264717-23264761)
chr8 (16-68)||(32945703-32945755)
[»] chr5 (23 HSPs)
chr5 (11-361)||(698097-698447)
chr5 (16-361)||(18592979-18593324)
chr5 (16-291)||(34377904-34378179)
chr5 (16-214)||(29087364-29087562)
chr5 (38-191)||(7392053-7392205)
chr5 (16-225)||(13954234-13954441)
chr5 (38-208)||(7195261-7195429)
chr5 (37-169)||(25991936-25992067)
chr5 (38-208)||(8297358-8297527)
chr5 (38-185)||(33258904-33259050)
chr5 (45-235)||(17854096-17854287)
chr5 (16-225)||(14302430-14302638)
chr5 (38-113)||(8730901-8730976)
chr5 (38-235)||(24072288-24072484)
chr5 (16-86)||(22675324-22675394)
chr5 (295-361)||(29087284-29087350)
chr5 (121-361)||(26046069-26046309)
chr5 (38-227)||(39184209-39184397)
chr5 (40-79)||(31721695-31721734)
chr5 (16-86)||(27713080-27713150)
chr5 (38-72)||(39024472-39024506)
chr5 (38-82)||(21402859-21402903)
chr5 (36-80)||(25658173-25658217)
[»] chr3 (32 HSPs)
chr3 (16-361)||(20611519-20611864)
chr3 (45-361)||(34475783-34476098)
chr3 (84-361)||(47235451-47235729)
chr3 (16-361)||(19176239-19176583)
chr3 (18-354)||(2394255-2394596)
chr3 (11-290)||(2392501-2392780)
chr3 (11-354)||(45163591-45163941)
chr3 (20-237)||(23328354-23328567)
chr3 (16-245)||(40023572-40023799)
chr3 (11-90)||(17550964-17551043)
chr3 (38-207)||(25647575-25647743)
chr3 (38-191)||(37123289-37123441)
chr3 (38-207)||(14755287-14755453)
chr3 (16-111)||(9584053-9584148)
chr3 (16-117)||(45398776-45398877)
chr3 (20-100)||(43012372-43012452)
chr3 (38-112)||(5556555-5556629)
chr3 (77-214)||(4463997-4464132)
chr3 (42-235)||(27398821-27399013)
chr3 (40-86)||(30127273-30127319)
chr3 (42-245)||(30935416-30935618)
chr3 (38-191)||(14193846-14193999)
chr3 (41-111)||(14879421-14879491)
chr3 (11-113)||(31482868-31482970)
chr3 (16-86)||(47945717-47945787)
chr3 (38-86)||(31424247-31424295)
chr3 (38-86)||(33143971-33144019)
chr3 (38-82)||(39021298-39021342)
chr3 (11-66)||(47235729-47235784)
chr3 (48-86)||(20710740-20710778)
chr3 (42-86)||(19295891-19295935)
chr3 (42-86)||(24099353-24099397)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-361)||(35772-36117)
[»] chr6 (13 HSPs)
chr6 (11-361)||(3117229-3117579)
chr6 (19-361)||(16510304-16510638)
chr6 (38-207)||(20701825-20701993)
chr6 (38-210)||(9223930-9224100)
chr6 (56-209)||(3880623-3880775)
chr6 (39-234)||(32935362-32935556)
chr6 (102-227)||(15132609-15132732)
chr6 (39-86)||(26216042-26216089)
chr6 (38-135)||(33968635-33968732)
chr6 (39-86)||(26534742-26534789)
chr6 (42-83)||(21266127-21266168)
chr6 (42-82)||(34105428-34105468)
chr6 (42-86)||(34090374-34090418)
[»] scaffold0200 (1 HSPs)
scaffold0200 (16-207)||(19273-19464)
[»] scaffold0119 (1 HSPs)
scaffold0119 (38-207)||(42160-42329)
[»] scaffold0050 (1 HSPs)
scaffold0050 (38-209)||(36596-36766)
[»] scaffold1613 (1 HSPs)
scaffold1613 (38-245)||(1039-1244)
[»] scaffold0063 (1 HSPs)
scaffold0063 (45-205)||(58020-58179)
[»] scaffold0620 (1 HSPs)
scaffold0620 (42-86)||(3841-3885)


Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 39338860 - 39339210
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  39338860 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacc 39338959  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  ||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||     
T  39338960 cctcgcccccggtacaccaaagaaaaaccaaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccg 39339059  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||  ||||    
T  39339060 aaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacacaccc 39339159  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     ||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  39339160 tccaaacttcgtaaacacctaaaccacccaaaaagcacaaacaagagctag 39339210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 11 - 361
Target Start/End: Complemental strand, 10524187 - 10523833
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaac----tgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcaggg 106  Q
    |||| |||||||||||||||||| || ||||||     |||||||||||||||||||||||| ||| ||||||||||||||||  |||||||| ||||||    
T  10524187 cacaaagcccaaaaaccaacttgagtcaaagaatatattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcaggg 10524088  T
Q  107 cacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccc 206  Q
    |||| |||||||   ||| ||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| ||    
T  10524087 cacctctcgcccccagtagaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtcc 10523988  T
Q  207 accaaaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacga 306  Q
    ||| |||||| ||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||     
T  10523987 accgaaaaccagcacacaatatgtaagatgaaagacatggcatgcgaaatttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgacacgc 10523888  T
Q  307 acccgccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||||  ||||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  10523887 accctacaaactccgtaaacacctaaaccacccgaaaagcacaaacaagagctag 10523833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 7874372 - 7874145
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||| | ||||||||||| ||  ||||||| |||||||||||| |||    
T  7874372 agcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatcg 7874273  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||| ||||||| |||| || |||| ||| |||||| | | ||||||||||||||  | ||||||||||||||||| |||  ||||||||||||  | ||    
T  7874272 ccctcggtacactagag-aacaccatatcaagtcaagc-aggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggacac 7874175  T
Q  216 cggcacacaatatgtaagacgaaagacatg 245  Q
    | ||||||||||| |||||||| |||||||    
T  7874174 cagcacacaatatttaagacgatagacatg 7874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 227
Target Start/End: Original strand, 14106545 - 14106734
Alignment:
Q  37 taaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaa 136  Q
    |||||| |||||||||||||| |||||||||| ||| ||||||||||||| ||  ||||||| |||||||||||||||||||| ||||||  |||| ||     
T  14106545 taaagagctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaac 14106644  T
Q  137 accaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaata 227  Q
    |||||||| |||||||| | |||||||||||| |  ||||||||  ||||||||| |||  ||||||||||||  |||||  |||||||||    
T  14106645 accaaatcaagtcaaac-aggattgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaata 14106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 1269542 - 1269373
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||| ||  || |||| || |||||||||||| || |||||| |||||||||| |    
T  1269542 aaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtataccagagaaaca 1269443  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
     |||||  || ||||  |||| ||||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  1269442 tcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgaccca 1269373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 39 - 303
Target Start/End: Complemental strand, 17105470 - 17105205
Alignment:
Q  39 aagaactgactcccgatctcgaatcaaaa-gcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||| |||| || |||||||||||||||| | ||| |||||| ||||||  | |||||||| || |||||||||||| ||| |||||||||| ||||| |    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaaca 17105371  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacga 237  Q
    || |||  |||||||||| | ||||||||||||  |||||||  ||||| |||| |||  ||||| ||||||  ||||| ||||||||||||||||| ||    
T  17105370 cctaattaagtcaaacaagg-ttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgtaagatga 17105272  T
Q  238 aagacatggcaagcga-agtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgaca 303  Q
    ||||||||  | | ||  ||  ||||| |||||||||||||||||||||||||| | ||||| ||||    
T  17105271 aagacatgatatgagatggtgcaaacaccaaacaaatcaaaaggaaaaggctcatcacaacgggaca 17105205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 387250 - 387128
Alignment:
Q  20 caaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgccct 119  Q
    |||||||||||||| || |||||| |||||||||||||| ||||||||| |||  |||||||||||| || ||||||||||||||||||||||||||||     
T  387250 caaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccctcgccc- 387152  T
Q  120 tggtacaccagagaaaaaccaaat 143  Q
     |||  ||||||||||||||||||    
T  387151 cggtgtaccagagaaaaaccaaat 387128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 14405279 - 14405162
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| |  ||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||| | ||  ||||||||||    
T  14405279 agcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcatca-agcacccctcg 14405181  T
Q  116 cccttggtacaccagagaa 134  Q
    |||  ||||||||||||||    
T  14405180 cccccggtacaccagagaa 14405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 4472004 - 4471934
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  4472004 agcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagact 4471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 25504931 - 25505006
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccct 113  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||  || ||||||| |  |||||||||||    
T  25504931 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccct 25505006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 13337352 - 13337227
Alignment:
Q  19 ccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggca-cccctcgcc 117  Q
    |||||| | |||||| || |||||||||||| ||||| |||||||||||| ||| |||||| |||||| |||   ||||| || |||||| |||||| ||    
T  13337352 ccaaaacctaacttgagtcaaagaactgacttccgatttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccctcacc 13337253  T
Q  118 cttggtacaccagagaaaaaccaaatc 144  Q
    | |||||||||||||||| ||||||||    
T  13337252 c-tggtacaccagagaaacaccaaatc 13337227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 16960063 - 16959993
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||| | |||||| |  ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  16960063 agcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact 16959993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 22885155 - 22885203
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  22885155 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 22885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 33788654 - 33788702
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33788654 aaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagact 33788702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 37770662 - 37770833
Alignment:
Q  37 taaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaa 136  Q
    ||||||| ||||||| ||||  |||||||||| ||| ||||||||| ||  ||  ||||||| ||  ||||||||||| |||| |||||||||||||||     
T  37770662 taaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaac 37770761  T
Q  137 accaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    || |||||  | ||||   | ||||| |||||||  | ||||||||||||||||| |||  ||||||||||||    
T  37770762 actaaatcgcgccaaatcga-attgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccacc 37770833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 225
Target Start/End: Original strand, 41086825 - 41086994
Alignment:
Q  53 gatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaa 152  Q
    |||||||||||||||| ||| | ||||||||||||||  ||||||| || |||||| ||||| ||| ||||||||||||| || ||||||||  | ||||    
T  41086825 gatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggca-ccctcacccctggtacaccagag-aacaccaaatcacgccaaa 41086922  T
Q  153 caaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaa 225  Q
    |||| |||| |||| |||  ||| |||||||||| |||| |||  || ||| |||||  ||||| ||||||||    
T  41086923 caaa-attgtagctggacaccgattcccgatctcaaagcaaaagtaatcggtccaccggaaacctgcacacaa 41086994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 31902438 - 31902484
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  31902438 agaactgactcccgatctcgaattaaaagcgattggcccaccagact 31902484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 2062970 - 2062901
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagac 85  Q
    ||||||||| | |||||| |  ||||| |||||||||||||||||||||||||| || ||||||||||||    
T  2062970 agcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 23650444 - 23650396
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagact 23650396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 15126432 - 15126480
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||| ||||||||||||||||||||||  ||| |||||||||||||    
T  15126432 aaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagact 15126480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 27740029 - 27739986
Alignment:
Q  43 actgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||| |||||| |||||||||||||| |||||||||||||    
T  27740029 actgactctcgatcttgaatcaaaagcgatcggcccaccagact 27739986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 4162052 - 4162090
Alignment:
Q  48 ctcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 10173578 - 10173751
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||| |  ||| |||| ||| |||||||||||||||||| ||| ||||||| ||||| ||  ||||||  |  || |||||| ||     
T  10173578 agcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaaaagagcacccttca 10173677  T
Q  116 cccttggtacaccagagaaaaacc-aaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaa 189  Q
    ||  |||||||||||||||| |||   ||| || ||||| ||||||||||||||||  ||||| |||||| ||||    
T  10173678 cctctggtacaccagagaaacaccgttatcaagccaaac-aagattgcagctagacaccgacttccgatcccgaa 10173751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 18681122 - 18681080
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||||||||||||||||||||||||| || || |||||||||    
T  18681122 agaactgactcccgatctcgaatcaaatgcaatcggcccacca 18681080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Complemental strand, 7695906 - 7695873
Alignment:
Q  259 aaacaacaaacaaatcaaaaggaaaaggctcaac 292  Q
    |||||||||||| |||||||||||||||||||||    
T  7695906 aaacaacaaacatatcaaaaggaaaaggctcaac 7695873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 36276200 - 36276241
Alignment:
Q  45 tgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  36276200 tgactcccgatctcgaatcaaaagcgaacagcccaccagact 36276241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 30685899 - 30686249
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||||| ||||||||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  30685899 cacaaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacc 30685998  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  30685999 cctcgccccaggtacaccagagaaaaaccaaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccg 30686098  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    ||||||  ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  30686099 aaaaccaacacacaatatgtaagacgaaagacaaggtaagcgaagtttaaacaacaaacagatcaaaaggaaaaggctcaacacaacgtgacacgaaccc 30686198  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  30686199 tccaaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctag 30686249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 31585755 - 31586095
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  31585755 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacc 31585854  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    |||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31585855 cctcaccctcagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccacca 31585954  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||| | ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  31585955 aaaatcagcaaacactatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacataacgtgacacgcaccc 31586054  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaa 351  Q
     |||||||| | |||||||||||||||||||||||||||||    
T  31586055 tccaaactctgtaaacacctaaaccacccaaaaagcacaaa 31586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 11 - 316
Target Start/End: Complemental strand, 41920538 - 41920234
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||    
T  41920538 cacaaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacc 41920439  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  41920438 cctcgccccag-tacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccg 41920340  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  41920339 aaaactagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccc 41920240  T
Q  311 gccaaa 316  Q
     |||||    
T  41920239 tccaaa 41920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 46692814 - 46693164
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| |  |||||||| |||||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||||||    
T  46692814 cacaaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacc 46692913  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
     |||||||  ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||     
T  46692914 tctcgcccccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccg 46693013  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||  |||||||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||| |||| | ||||  ||||    
T  46693014 aaaactagcacacaatatgtaagacaaaagacatggcatgtgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacataacacacaccc 46693113  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  46693114 tccaaactccgtaaacacctaaaacacccgaaaagcacaaacaagagctag 46693164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 5389416 - 5389727
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||| |||||  ||||||||| |||||||||||| |||||||    
T  5389416 cacaaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacc 5389515  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||      
T  5389516 cctcgcccccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactg 5389615  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||  || | ||||    
T  5389616 aaaaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggcttaacacaacgttgcaagcaccc 5389715  T
Q  311 gccaaactccga 322  Q
     |||||||||||    
T  5389716 tccaaactccga 5389727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 361
Target Start/End: Original strand, 24449932 - 24450277
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    |||||||||||||||  |  |||||||||||| |||||||| ||||||||| ||| ||||||||| |||||| ||||||| |||||||||||||||||||    
T  24449932 cccaaaaaccaacttaagacaaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcc 24450031  T
Q  118 cttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccg 217  Q
    |  |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||||||     
T  24450032 cccggtacaccagagaaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaacca 24450131  T
Q  218 gcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaac 317  Q
     |||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||| ||| |||||| || ||||||||| |||| ||||||    
T  24450132 acacataatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatccaaaggacaagactcaacacagcgtgacacgcaccccccaaac 24450231  T
Q  318 tccgaaaacacctaaaccaccc--aaaaagcacaaacaaaagctag 361  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||||    
T  24450232 tccgtaaacacctaaaccacccaaaaaaagcacaaacaagagctag 24450277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 361
Target Start/End: Original strand, 20113523 - 20113866
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||||  ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  20113523 cccaaaaaccaacttaagttaaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgcc 20113622  T
Q  118 cttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccg 217  Q
    |  |||||||| ||||||||||||| |   || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||      
T  20113623 cccggtacacccgagaaaaaccaaaccatatctaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaacta 20113722  T
Q  218 gcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaac 317  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||   ||||||||||| ||||  |||||    
T  20113723 gcacacaatatgtaagatgaaagacatggcatgcaaagtttaaacaacaaacaaatcaaaaggaaaagcctcaatataacgtgacacgcacccttcaaac 20113822  T
Q  318 tccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    | |  || ||||||| ||||||||||||||||||||| ||||||    
T  20113823 ttcttaagcacctaatccacccaaaaagcacaaacaagagctag 20113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 361
Target Start/End: Original strand, 24684478 - 24684821
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||| | || |||||||||||  |||||||||||| ||||| ||| ||||||||||||| ||  | |||||||| |||||||||||||    
T  24684478 agcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctcg 24684577  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||| ||| |||||    
T  24684578 cccccggtacaccagagaaaa-ccaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattggcc-accgaaaac 24684675  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    | ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| | ||| | |||||  |||| ||||    
T  24684676 cagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacagacaaatcacaaggaaaaggctcatcacaaagggacacacaccctccaa 24684775  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||| || | || |||||||||||||||| |||||||||| ||||||    
T  24684776 acttcgtagactcctaaaccacccaaaaggcacaaacaagagctag 24684821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 24659010 - 24658783
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||  |  ||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||| |||||||||||||| |    
T  24659010 agcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttg 24658911  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  | |||||||||| || |||| ||| |||||||| | ||||||||||||||  | ||||||||||| ||||| |||  ||||||||||||  |  |    
T  24658910 cccccgatacaccagag-aacaccatatcaagtcaaac-atgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccggactc 24658813  T
Q  216 cggcacacaatatgtaagacgaaagacatg 245  Q
    | |||||||| ||||||||||| |||||||    
T  24658812 cagcacacaaaatgtaagacgatagacatg 24658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 7857731 - 7857515
Alignment:
Q  19 ccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgccc 118  Q
    ||||||||||||||  |  |||||  |||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||| |||||||||||||||||||    
T  7857731 ccaaaaaccaacttcagcaaaagagttgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgccc 7857632  T
Q  119 ttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccgg 218  Q
       ||||||||||||| || || ||| ||||||||| | |||||| ||||||  | ||||||||||||||||| |||  || ||||||||   ||||| |    
T  7857631 ccagtacaccagagaacaa-catatcaagtcaaacata-attgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccag 7857534  T
Q  219 cacacaatatgtaagacga 237  Q
    |||||||||||||||||||    
T  7857533 cacacaatatgtaagacga 7857515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 38544760 - 38544965
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  |  ||||||| || |||| |||||||   |   || ||||||||||| |    
T  38544760 aaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaaca 38544858  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacga 237  Q
    |||||  || |||||| ||||||||||||||||  | |||||| |||||||||| |||  || |||||||| | || || |||||||||||||||||| |    
T  38544859 ccaaaatcaatcaaac-aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagacaa 38544957  T
Q  238 aagacatg 245  Q
    | ||||||    
T  38544958 acgacatg 38544965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 46814467 - 46814656
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||| ||||||||||||| |  ||| | ||||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||| |||||||||||||| |    
T  46814467 agccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttg 46814566  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
    |||  |||||||||||| || |||| ||| |||||||| | ||||||| ||||||  | |||| |||||||||| | |||  ||||||||||    
T  46814567 cccccggtacaccagag-aacaccatatcaagtcaaac-aggattgcaactagacaccaactctcgatctcgaatcaaaaataaccggccca 46814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 5459247 - 5459140
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||| |||||||  | ||| || |||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||| |||    
T  5459247 cacaaagcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacc 5459148  T
Q  111 cctcgccc 118  Q
    ||||||||    
T  5459147 cctcgccc 5459140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 191
Target Start/End: Original strand, 9313311 - 9313463
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| |||  |||||| ||||| ||  ||||||| || |||||||||||| | |  | ||||| ||||||| |    
T  9313311 aaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaaca 9313410  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    |||||||  | |||||||| |||||||||||||  | |||||||||||||||||    
T  9313411 ccaaatcacggcaaacaaa-attgcagctagacaccaactcccgatctcgaagc 9313463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 32864561 - 32864791
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||| || ||||||| |||| |||||||||||| ||||| ||| |||||||||| || ||  |||||||  | ||||||||||||     
T  32864561 agcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctca 32864660  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc-aaaaa 214  Q
    ||||  ||| | |||| ||| |||||||  || ||||  ||||||| ||||||||  ||||||| ||| ||||||| |||  ||||||||||||  ||||    
T  32864661 ccctcagtagatcagataaacaccaaataaagccaaaacaagattgtagctagacaccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaa 32864760  T
Q  215 ccggcacacaatatgtaagacgaaagacatg 245  Q
    |  |||||||| | ||| ||| |||||||||    
T  32864761 ctagcacacaaaacgtatgacaaaagacatg 32864791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 235
Target Start/End: Complemental strand, 17033645 - 17033449
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||  ||||||| || ||||||||||   | || ||| ||||| ||||  |    
T  17033645 aaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcaccccctactctcggttcaccatagaatca 17033546  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    ||  |  ||| ||||| ||||||||| ||||||  | | || |||||||||| | |||  ||||||||||||| || || |||||||||| |||||||    
T  17033545 ccgtagtcagccaaac-aagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaatccagcacacaataagtaagac 17033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 27031846 - 27031958
Alignment:
Q  22 aaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttg 121  Q
    |||||||||||| |  ||||| ||||||| ||||||||||||||||| ||| ||||||| ||||| ||  ||||||| ||||||||||||||  |||  |    
T  27031846 aaaaccaacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccg 27031945  T
Q  122 gtacaccagagaa 134  Q
    |||||||||||||    
T  27031946 gtacaccagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 19598715 - 19598647
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||| | |||||| || ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  19598715 cccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact 19598647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 27102250 - 27102143
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggca-cccctcgcccttggtacaccagagaaaa 136  Q
    ||||||||||||||||||||||||||||||| ||| |||||   ||||| | | ||||||  || |||||| |||||| |||| |||||||||||||||     
T  27102250 aaagaactgactcccgatctcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccctcaccctcggtacaccagagaaac 27102151  T
Q  137 accaaatc 144  Q
    ||||||||    
T  27102150 accaaatc 27102143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 50589207 - 50589423
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||| |  ||||||||| |||||||| ||||||||||||||||  ||||||| ||||  |  ||| ||  ||  ||||||||||      
T  50589207 agcccaaaaccaaacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagacgggcacccctta 50589306  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||   || |||||||||||  ||  | |||| ||||||| ||  ||||||||||  | | ||||||||||||||| |||| ||||||||||||| || |    
T  50589307 cccccagtccaccagagaaa--ccgtagccagccaaacaa-gaaagcagctagacgccaagtcccgatctcgaagcaaaattaaccggcccaccagaatc 50589403  T
Q  216 cggcacacaatatgtaagac 235  Q
    | ||||||||||||||||||    
T  50589404 cagcacacaatatgtaagac 50589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 46603451 - 46603402
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagacta 87  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  46603451 aaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagacta 46603402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 30655615 - 30655571
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 42374217 - 42374125
Alignment:
Q  43 actgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaa 135  Q
    |||||||||||||||| ||||||||||||| || ||||||||| | |  ||||||| || ||||||||||   |||| ||||||||| |||||    
T  42374217 actgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcaccccaaaccctcggtacaccaaagaaa 42374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 6583238 - 6583321
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttg 121  Q
    |||||| ||||| |||||||||||||||||| ||| || |||||||||| ||  ||||||| || | |||||||||| ||||||    
T  6583238 aaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccctcacccttg 6583321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 15840938 - 15840982
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||    
T  15840938 aactgactcccgatctcgaatcaaaagtgatcagcccaccagact 15840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 4651834 - 4651791
Alignment:
Q  43 actgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||    
T  4651834 actgactcccgatctcgaatcaaaagtgatcggccccccagact 4651791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 10785489 - 10785540
Alignment:
Q  174 gactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaa 225  Q
    |||||||||||||||||| |||| ||||||||||||  ||||| ||||||||    
T  10785489 gactcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaa 10785540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 189
Target Start/End: Complemental strand, 16147614 - 16147464
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||||||| | |||||||||   || | ||||||| |||  |  ||||||  || |||| ||| ||| |||  ||||| | ||||||| |    
T  16147614 aaagaactgactcccgatattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcacccccggtacgctagagaaaca 16147515  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaa 189  Q
    ||||||| || ||||||| ||||||||||||||   ||||||||||||||||    
T  16147514 ccaaatcaagccaaacaa-gattgcagctagacagtgactcccgatctcgaa 16147464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 6583333 - 6583383
Alignment:
Q  159 ttgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    ||||||||||||  ||||||||||||||||||| |||  ||||||||||||    
T  6583333 ttgcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccacc 6583383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 38564950 - 38564912
Alignment:
Q  48 ctcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagact 38564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 34774925 - 34774779
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaa 141  Q
    |||||||||||||||||| |||||||| ||| || |||||||||  ||  ||||||| || |||||||| ||| |||   ||| || ||||||| | |||    
T  34774925 aactgactcccgatctcg-atcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcaccc-ccgtatactagagaaacatcaa 34774828  T
Q  142 atccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    ||| || ||||| ||||||| || |||||  ||||||||| |||||||||    
T  34774827 atcaagccaaac-aagattgtagttagacaccgactcccgttctcgaagc 34774779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 46814709 - 46814794
Alignment:
Q  259 aaacaacaaacaaatcaaaaggaaaaggctcaacg-caacgtgacacgaacccgccaaactccgaaaacacctaaaccacccaaaa 343  Q
    ||||||||||  | ||| ||||||||||||||||  ||||| |||||| |||| |||||| ||  |||||||||||| ||||||||    
T  46814709 aaacaacaaaatagtcacaaggaaaaggctcaaccacaacgggacacgcaccctccaaacaccctaaacacctaaacaacccaaaa 46814794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 13987670 - 13987634
Alignment:
Q  48 ctcccgatctcgaatcaaaagcgataggcccaccaga 84  Q
    |||||||||||||| |||||||||| |||||||||||    
T  13987670 ctcccgatctcgaagcaaaagcgattggcccaccaga 13987634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 9 - 361
Target Start/End: Original strand, 47325878 - 47326230
Alignment:
Q  9 agcacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggca 108  Q
    |||||| |||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  47325878 agcacaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggca 47325977  T
Q  109 cccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccac 208  Q
    ||||||||||  |||||||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||     
T  47325978 cccctcgcccccggtacaccagagaaaaaccaaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccat 47326077  T
Q  209 caaaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaac 308  Q
    | |||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  47326078 cgaaaaccagcacacaatatgtaagaagaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcac 47326177  T
Q  309 ccgccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    || |||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  47326178 cctccaaactccgtaaatacctaaaccacccaaaaagcacaaacaagagctag 47326230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 11 - 361
Target Start/End: Complemental strand, 38306347 - 38305997
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  38306347 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacc 38306248  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     
T  38306247 cctcgccccctgtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccg 38306148  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  || | ||||    
T  38306147 aaaaccagcacacaatatgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgttgcaagcaccc 38306048  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||||||| ||||| |||||||||||||||||||||| ||| ||||||    
T  38306047 tccaaactccgtaaacatctaaaccacccaaaaagcacaaccaagagctag 38305997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 361
Target Start/End: Original strand, 3419656 - 3420002
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||  |||||||| ||| || |||||||||| ||||||||||||||    
T  3419656 agcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccctcg 3419755  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | || |||||    
T  3419756 cccccggtataccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaaac 3419855  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgc-aacgtgacacgaacccgcca 314  Q
    | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| |||| |||    
T  3419856 cagcacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaagggctcaacacaaacgtgacacgcaccctcca 3419955  T
Q  315 aactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  3419956 aactccgtaaacacctaaaccacccaaaaagcacaaacaagagctag 3420002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 293
Target Start/End: Original strand, 5860283 - 5860565
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5860283 cacaaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacc 5860382  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  ||||||  ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |     
T  5860383 cctcgcccccggtacagtagagaaaaaccaaattcagccaaacaaagattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcg 5860482  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacg 293  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  5860483 aaaaccagcacacaatatgtaagacgaaagacatggcgagcgaagtttaaacaacaaacaaatcaaaaggagaaggttcaacg 5860565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 19 - 361
Target Start/End: Complemental strand, 10244260 - 10243923
Alignment:
Q  19 ccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgccc 118  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||  ||||||||||||||||||||||| |||    
T  10244260 ccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctctccc 10244161  T
Q  119 ttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccgg 218  Q
      |||||||||||||||||||||||| | |||||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||| ||| |||||| |    
T  10244160 ccggtacaccagagaaaaaccaaatcta-tcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaaaaccag 10244062  T
Q  219 cacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaact 318  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||   |||| ||||||||||||  ||||||||| || |||| || ||||    
T  10244061 cacacaatatgtaagacgaaa-acatggcatgcgaagtttgaacaacaaacaa---aaaaagaaaaggctcaaaacaacgtgacccgcaccctcctaact 10243966  T
Q  319 ccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||| ||||||||| ||||||| |||| ||||||||| ||||||    
T  10243965 ccgtaaacacctacaccacccgaaaatcacaaacaagagctag 10243923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 361
Target Start/End: Complemental strand, 37795075 - 37794737
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||||||||||||||||||  | ||||||||||||||||||||||||||||||  ||  ||||||||| |||||| ||||||||||||||||||||    
T  37795075 cacaaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacc 37794976  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  |||||||||           |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||     
T  37794975 cctcgcccccggtacacca-----------aatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccg 37794887  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| ||||||||||||||| || |||| |  |||| ||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||  ||||    
T  37794886 aaaaccagcacacaatatgtaaaacaaaagtc-cggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaatgctcaacacaatgtgacacacaccc 37794788  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
      ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  37794787 ttcaaactccgtaaacacctaaaccacccaaaaagcacaaacaagagctag 37794737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 25160896 - 25160552
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||   || ||||  ||||| ||||||||||||||||||  || || |||||||||||||  ||||||||||||||||||||||||    
T  25160896 agcccaaaaaccaacttaatttcaagatttgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcg 25160797  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||| |||||||||||||||||||||| | ||||||||||| || ||| ||||||| |||||||||||| | |||||||||||| |  |||||| |||||    
T  25160796 ccctcggtacaccagagaaaaaccaaaccaagtcaaacaaaaatagcaactagaccccgactcccgatcccaaagccaaatgaatcatcccaccgaaaac 25160697  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    | | |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||  |||||||||||  |||| ||||    
T  25160696 cagtacacaatatgtaagacaaaagacatggcatgcgtagtttaaacaacaaacaaatcaaaaggaataggttcaa-acaacgtgacaccgaccctccaa 25160598  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||| | |||||||||||||| ||||||||||||||||| ||||||    
T  25160597 actctgtaaacacctaaaccatccaaaaagcacaaacaagagctag 25160552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 3867197 - 3866921
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || |||||||||||||||| |||||||||||||| |||  |||||||| | | || ||||||||||||||| ||||| |||    
T  3867197 agcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccacccttcg 3867098  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||| |||||||||||| |||  || || ||||||  ||||    
T  3867097 ccctcggtacaccagagaaaaaccatatcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccacc-gaaac 3866999  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacg 293  Q
    | | ||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  3866998 caggacacaatatgtaagacgaaagacgtggcatgtgaagtttaaacaacaaataaatcaaaaggaaaaggctcaacg 3866921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 344
Target Start/End: Complemental strand, 33435189 - 33434863
Alignment:
Q  17 gcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgc 116  Q
    ||||| |||| |||||| |  ||||||||||||||||||||||||||||||| ||| | | ||||||||| || |||||||||| |||||||||||||||    
T  33435189 gcccacaaacgaacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgc 33435090  T
Q  117 ccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaacc 216  Q
    ||  |||||||||||||||| ||||||| ||  ||||||||||| || |||||||  |||| ||||||||||||| |||  || |||||||||  |||||    
T  33435089 ccccggtacaccagagaaaa-ccaaatcaagctaaacaaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaacc 33434991  T
Q  217 ggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaa 316  Q
      |||||||||||||| ||||| ||||||||| || ||||||||||||| |||  ||| |||||||||||||| || ||||| ||| ||  ||| |||||    
T  33434990 aacacacaatatgtaatacgaatgacatggcatgcaaagtttaaacaaccaacctatcgaaaggaaaaggctcgacacaacgggacccgctccctccaaa 33434891  T
Q  317 ctccgaaaacacctaaaccacccaaaaa 344  Q
    | ||  ||| ||||||||||||||||||    
T  33434890 caccctaaatacctaaaccacccaaaaa 33434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 41089752 - 41089918
Alignment:
Q  20 caaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgccct 119  Q
    |||||||||||||| || ||||| ||||||||| ||||||||||||||| ||| || |||||||||| || |||||||||||||| |||||||||||||     
T  41089752 caaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccc 41089851  T
Q  120 tggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctc 186  Q
     | |||||||||||||||||||||| |||||||||||||||| ||||||||| | |||| |||||||    
T  41089852 cgatacaccagagaaaaaccaaatcaagtcaaacaaagattgtagctagaccccaactctcgatctc 41089918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 34390043 - 34389760
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||  |  ||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||| |||||||||| ||||     
T  34390043 agcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctca 34389944  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||   ||||||||||| || |||| ||| |||||||  | ||||||| ||||||  | ||| | ||||||||||| |||  ||| |||||| || | ||    
T  34389943 cccccagtacaccagag-aacaccatatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcagacac 34389845  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcga--agtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacg 298  Q
    | |||||||||||||| ||||| |||||||  | ||||   ||  ||||||||| ||||| ||||||||||||| || |||||||    
T  34389844 cagcacacaatatgtacgacgatagacatgatatgcgattggtgcaaacaacaagcaaatgaaaaggaaaaggcccatcgcaacg 34389760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 244
Target Start/End: Original strand, 6716758 - 6716963
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||| ||  |  |||| || |||||||||||| | || ||||||||||||||| |    
T  6716758 aaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctcggtacaccagagaaaca 6716857  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacga 237  Q
     |||||| || ||||  ||||||||||||||||  |||||||||||||| |||  |||  ||| |||||||| |||||| |||| ||| | ||||||| |    
T  6716858 tcaaatcaagccaaa-taagattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcacgcaaaaagtaagacaa 6716956  T
Q  238 aagacat 244  Q
    | |||||    
T  6716957 atgacat 6716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 225
Target Start/End: Complemental strand, 8745209 - 8745026
Alignment:
Q  41 gaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaacca 140  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||| | ||  ||||||| || ||| |||||||| |||| ||| ||||||||||| ||||    
T  8745209 gaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcaccagagaaacacca 8745110  T
Q  141 aatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaa 225  Q
     |||    ||||| || |||||||||||||  || || ||||||||||||| |||  |||||||||||| |||||| ||||||||    
T  8745109 gatcacaccaaac-aacattgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaa 8745026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 6584990 - 6584889
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||  |  ||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||| ||||||||||||||||    
T  6584990 agcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcg 6584891  T
Q  116 cc 117  Q
    ||    
T  6584890 cc 6584889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 35745827 - 35746025
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| |  |||||  ||||| |||||||||||||||||| |||  ||||| |||||| ||  || ||||||| |||||||||||||    
T  35745827 agcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctcg 35745926  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||||| ||||| || |||| ||| |||||||| |||||||| ||||| |  | ||| ||||||||||||| |||  |||||| ||||| |||||    
T  35745927 cccccggtacatcagag-aacaccatatcaagtcaaac-aagattgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccgaaaac 35746024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 11379149 - 11379295
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| |  |||||||||| ||||||||||   |||| ||| ||||||||||| |    
T  11379149 aaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcaccccaaaccctcggtccaccagagaaaca 11379248  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatct 185  Q
    ||  |  ||| ||||| ||||||| ||||||||  | |||||||||||    
T  11379249 ccgtagtcagccaaac-aagattgtagctagacaccaactcccgatct 11379295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 235
Target Start/End: Complemental strand, 13311898 - 13311701
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |  ||||||  ||  ||||||||||   ||  ||| ||||||||||| |    
T  13311898 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcaccccttatccccggtccaccagagaaaca 13311799  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
     | ||  ||||||||  |||| ||||| |||||  | ||||||||||||||||  |||  |  |||||||||| || || |||||||| |||||||||    
T  13311798 acgaagtcagtcaaaataagaatgcagttagacaccaactcccgatctcgaaggaaaagtactcggcccaccagaatccagcacacaaaatgtaagac 13311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 298
Target Start/End: Complemental strand, 16954722 - 16954452
Alignment:
Q  28 aacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacac 127  Q
    |||||| || ||||||||||||  |||||||||| |||||| ||| || | |||||||| ||  ||||||| || |||||||||||| ||  || |||||    
T  16954722 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgatacac 16954623  T
Q  128 cagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaata 227  Q
    |||||||| ||||||||  | | ||| ||||||||||||||||  | |||| |||||| ||||| |||  || ||||||| |  ||||| ||||||| ||    
T  16954622 cagagaaagaccaaatcgcg-ccaaccaagattgcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacacagta 16954524  T
Q  228 tgtaagacgaaagacatggcaagc-gaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacg 298  Q
     ||| ||| || |||| |  | || |  ||  |||||||||||| ||| ||||||||||||||||| |||||    
T  16954523 agtatgacaaacgacaagatatgcagtggtgcaaacaacaaacatatccaaaggaaaaggctcaactcaacg 16954452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 44755663 - 44755486
Alignment:
Q  60 aatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagat 159  Q
    ||||||||| ||| ||||||||||||| ||  ||||||| || ||||||||||||  ||  ||||||||||||||| ||||||||  |||||||||| ||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctc-accacggtacaccagagaaacaccaaatcacgtcaaacaaa-at 44755566  T
Q  160 tgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacgaaa 239  Q
     ||||||||||  |||||||||| ||| |||| |||| ||  ||||||||   |||| |||||||| | ||| |||||||    
T  44755565 agcagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaaaaagtatgacgaaa 44755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 42533281 - 42533442
Alignment:
Q  45 tgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatc 144  Q
    |||||||||||||||||||||||| |||  |||||||||||| ||  ||||||| || |||||||||||| |||  | | ||||||||||| |||| |||    
T  42533281 tgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaaacaccacatc 42533380  T
Q  145 cagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
      | ||||  |||| ||||||| |||   |||||||||||||||||| |||  ||||||||||    
T  42533381 gcgccaaa-taagaatgcagctggacacagactcccgatctcgaagcaaaagtaaccggccca 42533442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 1320853 - 1320701
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||| ||||| | |||||||||| ||| ||||||||||||| ||  ||||||| |  |||||||||||| |||  | |||| |||||||| |    
T  1320853 aaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcacccccgatacatcagagaaaca 1320754  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    ||||||   | |||||||| ||| |||||||||  | |||||||||||||||||    
T  1320753 ccaaattgcgccaaacaaa-attacagctagacaccaactcccgatctcgaagc 1320701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 24324820 - 24324926
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||| |||||||||||||||||||||||  ||| ||||||||| ||| ||| ||||||| || |||||||||||   ||  ||||||||| ||||| |    
T  24324820 aaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacaccaaagaaaca 24324919  T
Q  138 ccaaatc 144  Q
    |||||||    
T  24324920 ccaaatc 24324926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 23983274 - 23983162
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    ||||||| | |||||| | ||| ||| ||||||||||||||||||||||| |||| | |||||||||||  || |||||||||| | |||||||||| ||    
T  23983274 cccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattag-aaggcacccctcacc 23983176  T
Q  118 cttggtacaccaga 131  Q
    || ||| |||||||    
T  23983175 ctcggtccaccaga 23983162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 12480945 - 12480901
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  12480945 aaagaactgactcccgatctcgaatcaaaagcgatcggcccacca 12480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 16828948 - 16829064
Alignment:
Q  28 aacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacac 127  Q
    |||||| || ||||||||||||  |||||||||| |||||| |||  ||| |||||||| ||  ||||||| || |||||||||||| ||| || |||||    
T  16828948 aacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccctgatacac 16829047  T
Q  128 cagagaaaaaccaaatc 144  Q
     ||||||| ||||||||    
T  16829048 tagagaaacaccaaatc 16829064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 3478411 - 3478335
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctc 114  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||| ||| ||  ||||||  || ||||||||||||    
T  3478411 aaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctc 3478335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 38485610 - 38485567
Alignment:
Q  43 actgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||||||||||||||||||| ||| |||||||||||||    
T  38485610 actgactcccgatctcgaatcaaaagtgatcggcccaccagact 38485567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 9349806 - 9349760
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||    
T  9349806 agaattgactcccgatctcgaatcaaaagtgatcggcccaccagact 9349760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 46133302 - 46133348
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||    
T  46133302 agaactgactcccgatctcaaatcaaaagcgatcggctcaccagact 46133348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 44353559 - 44353616
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaag 68  Q
    |||| ||||||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  44353559 cacaaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaag 44353616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 35206705 - 35206763
Alignment:
Q  28 aacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||| ||||| ||||  |||||||||||| |||||||| ||| |||||||||||||    
T  35206705 aacttgcattaaaaaactagctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  48 ctcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 2570208 - 2570171
Alignment:
Q  49 tcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  2570208 tcccgacctcgaatcaaaagcgataagcccaccagact 2570171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 9428128 - 9428176
Alignment:
Q  39 aagaactgactcccgatctcgaatcaaaagcgataggcccaccagacta 87  Q
    ||||||||||| | |||||||||||||||| ||| ||| ||||||||||    
T  9428128 aagaactgacttctgatctcgaatcaaaagtgatcggctcaccagacta 9428176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 47457044 - 47457092
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||| ||||| ||||||||||||| || ||| ||||||    
T  47457044 aaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagact 47457092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 48058680 - 48058724
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||    
T  48058680 aactgacttccgatctcaaatcaaaagcgatcgacccaccagact 48058724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 30964520 - 30964177
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    |||||||||||||||| || ||||||| ||||||||||| ||||||||||| ||| |||||| |||| |||| |||||||||||||||||||||||||||    
T  30964520 cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgcc 30964421  T
Q  118 cttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccg 217  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||     
T  30964420 ctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaacca 30964321  T
Q  218 gcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaac 317  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||    
T  30964320 gcacacaataagtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggttcaacacaacgtgacacgcaccctccaaac 30964221  T
Q  318 tccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||| |||||||||||||||||||||||||||||||| ||||||    
T  30964220 tccgcaaacacctaaaccacccaaaaagcacaaacaatagctag 30964177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 361
Target Start/End: Complemental strand, 4305811 - 4305461
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||| ||||||||||||| |  |||||||| |||||||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||    
T  4305811 cacaaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcacc 4305712  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
     || ||||  |||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||     
T  4305711 gcttgcccccggtacaccagagaaaaacgaaatccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagccaaatgaaccggcccaccg 4305612  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||     
T  4305611 aaaaccagtacacaatatgtaagacaaaagacatggcaagcgaagtttaaacaacaaacaaaactaaaggaaaaggctcaacacaacgtgacacgaacct 4305512  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||| ||||||||||| |||| ||||||||||||||||||| ||||||    
T  4305511 tccaaacaccgaaaacacccaaacaacccaaaaagcacaaacaagagctag 4305461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 8255108 - 8254763
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || |||||||||||| | ||||||| |||||||| ||| ||||||||||||| || |||||||||||||||||||||||||    
T  8255108 agcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcg 8255009  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  8255008 cccccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaac 8254909  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    |  |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| ||| | |||||| ||||  |||    
T  8254908 caacacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcacccttcaa 8254809  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||| | ||||||||||||||||||| || ||||||||| ||||||    
T  8254808 actcggtaaacacctaaaccacccaacaatcacaaacaagagctag 8254763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 8268526 - 8268181
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || |||||||||||| | ||||||| |||||||| ||| ||||||||||||| || |||||||||||||||||||||||||    
T  8268526 agcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcg 8268427  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  8268426 cccccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaac 8268327  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    |  |||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| ||| | |||||| ||||  |||    
T  8268326 caacacacaatatgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaaagcgacacgcacccttcaa 8268227  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||| | ||||||||||||||||||| || ||||||||| ||||||    
T  8268226 actcggtaaacacctaaaccacccaacaatcacaaacaagagctag 8268181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 38 - 215
Target Start/End: Original strand, 53823443 - 53823619
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||| ||  ||||||| || |||||||||||| ||   ||||||||||||||| |    
T  53823443 aaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacaccagagaaaca 53823542  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||| || || ||| | |||||||||| |||||  ||||||||||||||||||| |||  ||||||||||||||||||    
T  53823543 ccaagtcaagccaagc-aagattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccaccaaaaac 53823619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 30167566 - 30167736
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    |||||||| ||||||| || ||||||| ||||||||||||||||||||||| ||| | |||||  ||||||||||||||||  |||||||||||||| ||    
T  30167566 cccaaaaatcaacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccctcacc 30167665  T
Q  118 cttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaa 189  Q
    |  || ||| || |||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||||||    
T  30167666 c-cggcacatcaaagaaaacctaaatcaaatcaaacaaagattgtagctagaccccgactcccgatctcgaa 30167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 25753253 - 25753074
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||| |  ||||||||||||||||||||||||||||||| ||| | ||||||||||| ||  ||||||| ||  |||||| ||||     
T  25753253 agcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctca 25753154  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaat 196  Q
    ||   ||||||||||||||| |||| |||  | ||||| ||||||||||||||||  ||||||||||||||||||| ||||    
T  25753153 cctccggtacaccagagaaacaccacatcacgccaaac-aagattgcagctagacaccgactcccgatctcgaagcaaaat 25753074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 39421042 - 39421187
Alignment:
Q  45 tgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatc 144  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||| |||| || || |||||||||||| ||||  |||||  ||||||| ||||||||    
T  39421042 tgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaaatc 39421141  T
Q  145 cagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
      | ||||| ||||||||||||||||  ||| |||||||||||||||    
T  39421142 acgccaaac-aagattgcagctagacaccgattcccgatctcgaagc 39421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 225
Target Start/End: Original strand, 22811182 - 22811367
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||| ||||  ||| ||||||||||||| ||| ||||||| || ||||||| |||| |||  | ||||||||||||| |    
T  22811182 aaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccc-cgatacaccagagaaaca 22811280  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaa 225  Q
    |||||||    |||||||| |||||| ||||||  | | | ||||||||||||| |||  ||||| |||||| |||||| ||||||||    
T  22811281 ccaaatcacaccaaacaaa-attgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaa 22811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 38 - 209
Target Start/End: Original strand, 31050684 - 31050853
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||| || ||| |||||||||||||||||| ||| ||||||||||||| ||  ||||||| || ||||||||||||||||  |||||| || || || |    
T  31050684 aaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctcgcccccggtacatcaaag-aaca 31050782  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    ||| ||| |||||||| | |||||||||||| |  ||||||||| ||||||||| |||  ||||||||||||    
T  31050783 ccatatcaagtcaaac-aggattgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccacc 31050853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 2825864 - 2825691
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||  ||| |  |||||  ||| |||||||||||||||||||  ||| |||||||| |||| ||  ||||||| ||||| ||||||||||    
T  2825864 agcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccctcg 2825765  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    |||| |||||||||||| || |||| ||| |||||||| | ||||||||||||||  | |||| | ||||||||||    
T  2825764 ccctcggtacaccagag-aacaccatatcaagtcaaac-atgattgcagctagacaccaactctcaatctcgaagc 2825691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 235
Target Start/End: Original strand, 46698807 - 46699002
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |  ||||||| || |||||||||| | |||| ||| ||||| |||||      
T  46698807 aaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcaccccacaccctcggtccaccaaagaaact 46698906  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    |   | |    ||||||| || |||||||||||  | ||||||||||||||||| |||  || ||||||| || || || ||||||||||||||||||    
T  46698907 ctgtagcttaccaaacaa-gactgcagctagacaccaactcccgatctcgaagcaaaagtaatcggccca-cagaatccagcacacaatatgtaagac 46699002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 209
Target Start/End: Original strand, 19815246 - 19815416
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||| |||||||||| |||||  || || |||||||||| ||  ||||||  || |||||||||||| |||  |||  |||||| ||| |    
T  19815246 aaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaaccagaaaaata 19815345  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    | | ||| || ||||| ||||||||||||||||  |||||| |||||||||||| |||  ||| ||||||||    
T  19815346 caatatcaagccaaac-aagattgcagctagacaccgactctcgatctcgaagcaaaagtaactggcccacc 19815416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 19673159 - 19672991
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||| |||||||||| ||||| ||  || |||||||||| ||  ||||||  || |||||||||||| |||  | |  |||||||||| |    
T  19673159 aaagaactgactcctgatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcacccccgatcaaccagagaaata 19673061  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccac 208  Q
     || ||| || ||||||| ||||||||||||||   |||||||||||||||||| |||  |||||||||||    
T  19673060 tcatatcaagccaaacaa-gattgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccac 19672991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 48098388 - 48098286
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaa 141  Q
    |||||||||||||||||||| |||||| |||||||||| | | || ||  ||||||| || |||||||| ||| |||| |||||||| |||||| |||||    
T  48098388 aactgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcggtacacctgagaaacaccaa 48098289  T
Q  142 atc 144  Q
    |||    
T  48098288 atc 48098286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 38637254 - 38637350
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaa 135  Q
    |||||| |||||||||||||||||||||||| ||| ||||| ||||||||| || || ||  || ||||||||| || ||  ||||||||||||||||    
T  38637254 aaagaattgactcccgatctcgaatcaaaagtgatcggcccgccagactat-atgcccaaaaaggagggcacccatcacctctggtacaccagagaaa 38637350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 6599967 - 6600015
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  6599967 aaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagact 6600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 12296118 - 12296038
Alignment:
Q  155 aagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    |||| |||||||||||  | ||||||||||||||||| |||  || |||||||||| || || ||||||||||||||||||    
T  12296118 aagaatgcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccaccagaatccagcacacaatatgtaagac 12296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 16501790 - 16501746
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  16501790 aaagagctgactcccgatctcgaatcaaaagcgatcggcccacca 16501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 2061760 - 2061857
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaa 135  Q
    ||||||||||||| | ||||||||||||||| |||  |||||||||||| ||  | ||||| |  |||||||||||| || | | |||||||||||||    
T  2061760 aaagaactgactctcaatctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccctcaccttcgatacaccagagaaa 2061857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 35800548 - 35800500
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||||| |||||||||||||||||||||| ||  |||||||||    
T  35800548 aaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagact 35800500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 39041300 - 39041344
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||    
T  39041300 aactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 21387227 - 21387274
Alignment:
Q  39 aagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||| |||||||||||||||||| ||| || ||||||||||    
T  21387227 aagaactgacttccgatctcgaatcaaaagtgatcggtccaccagact 21387274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 28966948 - 28966878
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||| | |||||| |  ||||||||||||||| |||||||||||||| |||| | || ||||||||    
T  28966948 agcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagact 28966878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 38929908 - 38929838
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||| | |||||| |  |||||||||||||  |||||||||||||||| ||| |||||| ||||||    
T  38929908 agcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagact 38929838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 40813813 - 40813851
Alignment:
Q  48 ctcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 49747586 - 49747481
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||| ||||||| ||||||||| ||| ||| ||||||||| ||  ||||||| |  ||||| ||  || ||| ||||||| |||||||| |    
T  49747586 aaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatcaaaagggcgccattcaccc-tggtacatcagagaaaca 49747488  T
Q  138 ccaaatc 144  Q
    |||||||    
T  49747487 ccaaatc 49747481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 19311369 - 19311439
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctc 114  Q
    |||||||||||| |||||||||||||| ||| | ||||||||||| ||| ||||||| || ||| ||||||||    
T  19311369 aactgactcccg-tctcgaatcaaaagtgatcgacccaccagact-taaaaccaaatcagaaggacacccctc 19311439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 36962626 - 36962685
Alignment:
Q  26 ccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||| || ||||| |||||||| ||||||||||||||||  || |||||||||||||    
T  36962626 ccaacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 37986853 - 37987204
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||| |||||||||||||| || ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||    
T  37986853 cacaaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacc 37986952  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  |||||||||||||||||||||||| ||||||| ||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||     
T  37986953 cctcgcccccggtacaccagagaaaaaccaaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccg 37987052  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctc-aacgcaacgtgacacgaacc 309  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||| |||    
T  37987053 aaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaaacacaacgtgacacgcacc 37987152  T
Q  310 cgccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    | || ||||||| ||||||||||||||||| |||| ||||||||| ||||||    
T  37987153 ctcctaactccgtaaacacctaaaccacccgaaaaacacaaacaagagctag 37987204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 24995390 - 24995740
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| | ||||    
T  24995390 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacc 24995489  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  24995490 cctcgcccccagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccg 24995589  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| |||||||||||||||||||||| |||| |||  |||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||   |||     
T  24995590 aaaaccagcacacaatatgtaagacgaaaaacatagcatacgaagtttaaacaacaaataaatcaaaaggaaaatgctcaacacaatgtgacaaccaccg 24995689  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  24995690 tccaaactccgtaaacacctaaaccacccaaaaagcactaacaagagctag 24995740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 305
Target Start/End: Original strand, 34389000 - 34389294
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || |||||||||||||  |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  34389000 cacaaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacc 34389099  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | |     
T  34389100 cctcgcccctggtacaccagagaaaaaccaaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcg 34389199  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacg 305  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34389200 aaaaccagcacacaatatgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacg 34389294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 11 - 301
Target Start/End: Complemental strand, 9519585 - 9519295
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||  ||| ||||||| |||||||| ||||||||||||||||||||    
T  9519585 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacc 9519486  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    |||| |||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||      
T  9519485 cctcacccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactg 9519386  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtga 301  Q
    |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  9519385 aaaaccagcacacaatatgtaagacgaaagaaatggcatgcgaagtttaaacaacaaacaaataaaaaggaaaaggctcaacacaacgtga 9519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 11 - 361
Target Start/End: Original strand, 32066290 - 32066640
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||| | || ||||| |||||||||||| |||||||||||| ||| ||||||||||||||||  |||||||||||||||||||    
T  32066290 cacaaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacc 32066389  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  ||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||     
T  32066390 cctcgcccccggtacactagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccg 32066489  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||  | ||    
T  32066490 aaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacatgacacacatcc 32066589  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||||  | ||| ||||||||||||| || ||||||||||| ||||||    
T  32066590 tccaaactttgtaaatacctaaaccacccgaagagcacaaacaagagctag 32066640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 36630918 - 36630573
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||||| |||| | || ||||||||||| ||||||||||||| ||||| ||| ||||||||||||| ||  ||||||||||||||||||||||||    
T  36630918 agcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctcg 36630819  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  36630818 cccccggtacaccaaagaaaaaccaaatcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaaaac 36630719  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    |  |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||| |||   |||||| |||| ||||    
T  36630718 caacacacaatatgtaagacgaaagacatggcatgcgaagtttaaccaacaaacaaatcacaaggaaaaggttcaacacaaaaggacacgcaccctccaa 36630619  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||||| | || |||||||||||||||| |||||||||| ||||||    
T  36630618 actccgtagactcctaaaccacccaaaaggcacaaacaagagctag 36630573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 146 - 330
Target Start/End: Original strand, 31210320 - 31210505
Alignment:
Q  146 agtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaa-tatgtaagacgaaagacat 244  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||    
T  31210320 agtcaaacaaagattgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaatatgtaagacgaaagacat 31210419  T
Q  245 ggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaactccgaaaacacct 330  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| || ||||||| ||||||||    
T  31210420 ggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccgaactccgtaaacacct 31210505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 31207364 - 31207494
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  31207364 cccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggca-ccctcgcc 31207462  T
Q  118 cttggtacaccagagaaaaaccaaatccagtc 149  Q
    | ||||||||||||||||||||||||| ||||    
T  31207463 cctggtacaccagagaaaaaccaaatcaagtc 31207494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 15821379 - 15821606
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||||||||| |  || ||||| ||||||||||||||||||||||||| |||  |||||||||||| ||  ||||||| ||||||||||||||||    
T  15821379 agcccaaaaaccaacataagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcg 15821478  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||| |||||||||||| || |||| ||| || ||||| | ||||| |||||| |  | ||| |||||||| |||  |||  || |||||||||| | ||    
T  15821479 ccctcggtacaccagag-aacaccatatcaagccaaac-aggattgtagctaggcaccaacttccgatctcaaagaaaaaataatcggcccaccagatac 15821576  T
Q  216 cggcacacaatatgtaagacgaaagacatg 245  Q
    |  ||||||||||||||||||| |||||||    
T  15821577 caacacacaatatgtaagacgatagacatg 15821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 282
Target Start/End: Original strand, 10248575 - 10248818
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||||||||| |||||||||| ||| || |||||| | | ||  || ||||||| ||| |||||||| |||  ||||||||||||||| |    
T  10248575 aaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacaccagagaaaca 10248674  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacga 237  Q
    ||||||| || |||||||| |||||||||||||  ||||||||||||||||||| |||  ||| ||||||||  |||||  ||||||| | ||||||| |    
T  10248675 ccaaatcaagccaaacaaa-attgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaa-aagtaagacaa 10248772  T
Q  238 aagacatggcaag-cgaagtttaaacaacaaacaaatcaaaaggaa 282  Q
    | |||| ||||||  |  ||  ||||||||||| ||||||||||||    
T  10248773 acgacaaggcaagtagtggtgcaaacaacaaaccaatcaaaaggaa 10248818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 16457456 - 16457572
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||| || |||||| |||||| || |||||||||||| ||||    
T  16457456 cacaaagcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgg-ccaccaaactatagtatcaaattagcaggacacc 16457554  T
Q  111 cctcgcccttggtacacca 129  Q
    |||||||| ||||||||||    
T  16457555 cctcgccc-tggtacacca 16457572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 12898269 - 12898376
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| ||||| |||||||||||| |||| | |||||||||| |||||||||||||||| ||| ||  |||||||||||| ||||||||||  ||||||||    
T  12898269 cacaaagccccaaaaccaacttgagttagataactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacc 12898368  T
Q  111 cctcgccc 118  Q
    ||||||||    
T  12898369 cctcgccc 12898376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 17657024 - 17657191
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||| ||| ||   |||| |||| ||||||||||||  ||  |||||| |||||||| |    
T  17657024 aaagaactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctcatcc-cggtacatcagagaaaca 17657122  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
    |||||||  | ||||  ||||||| |||||| |  ||||||||||||||||||| |||| ||||||||||    
T  17657123 ccaaatcacgccaaa-taagattgtagctagccaccgactcccgatctcgaagcaaaattaaccggccca 17657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 30236150 - 30236247
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaa 135  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||  || ||||||| || |||||||||||  |||  ||| |||||||||||    
T  30236150 aaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttacccccggtccaccagagaaa 30236247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 10552325 - 10552231
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaa 135  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||  |  ||||||| || ||||||||||| |||| ||||  ||||||||||    
T  10552325 agaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcaccccttgcccctggtctaccagagaaa 10552231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 41893396 - 41893473
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactata 89  Q
    |||| ||||||||||| |||||| |  ||||||||||||||||||||||||||||||| | | ||||||||||||||||    
T  41893396 cacaaagcccaaaaac-aacttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagactata 41893473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 15906745 - 15906697
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  15906745 aaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagact 15906697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 35062514 - 35062468
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||||    
T  35062514 agaactgactctcgatctcgaatcaaaatcgatcggcccaccagact 35062468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 20138512 - 20138455
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaag 68  Q
    |||| ||||||||||||||| |  || ||||||||||||||||||||| |||||||||    
T  20138512 cacaaagcccaaaaaccaacataagtcaaagaactgactcccgatctcaaatcaaaag 20138455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 10552192 - 10552133
Alignment:
Q  175 actcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    ||||||||||||||||| ||||| | ||||||| ||||| || |||||||||| |||||||    
T  10552192 actcccgatctcgaagcaaaatg-atcggcccatcaaaatccagcacacaataagtaagac 10552133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 17720728 - 17720771
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||    
T  17720728 aaagaactgactcccgatc-cgaatcaaaagcgatcagcccacca 17720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 23264761 - 23264717
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||  |||||| ||| ||||||    
T  23264761 aactgactcccgatctcgaatcaaaattgataggtccatcagact 23264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 32945703 - 32945755
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaag 68  Q
    ||||||||| | ||||||  | |||||| ||||||||||||||||||||||||    
T  32945703 agcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaag 32945755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 361
Target Start/End: Complemental strand, 698447 - 698097
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || |||||  |||||||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||||||    
T  698447 cacaaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacc 698348  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| |    
T  698347 cctcgcccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccacta 698248  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaaccc 310  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||  ||||||||||  ||||    
T  698247 aaaaccagcacacaatatgtaagacgaaagacatggcatgcgaagtttgaacaacaaacatatcaaaaagaaaaggctcaacataacgtgacacacaccc 698148  T
Q  311 gccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
     |||||||||| ||||||||||| ||||| || ||||||||||| ||||||    
T  698147 tccaaactccgtaaacacctaaaacacccgaagagcacaaacaagagctag 698097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 18593324 - 18592979
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || |||||||| |||||||||||||||||||||| |||  |||||| | ||||||  ||||||||||||||||| ||||||    
T  18593324 agcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcg 18593225  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  ||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||     
T  18593224 cccccggtacacgagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaat 18593125  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    | ||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||  ||||||||| | |||| ||||    
T  18593124 cagcacacaatatgtaaaacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacataacgtgacatgcaccctccaa 18593025  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||||| ||||||||||||||||  || ||||||||||| ||||||    
T  18593024 actccgtaaacacctaaaccacctgaagagcacaaacaagagctag 18592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 291
Target Start/End: Complemental strand, 34378179 - 34377904
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||| ||| |    
T  34378179 agcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttg 34378080  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  34378079 cccccggtacaccagagaaaacccaaatcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaaac 34377980  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaa 291  Q
    | |||||| |||| |||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  34377979 cagcacacgatatataagacgaaagatatggcatacgaagtttaaacaacaaacgaatcaaaaggaaaaggctcaa 34377904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 29087562 - 29087364
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||| ||||||| |||  | |||||||||||||| |||||||||||||||| |||  | |||||||||| ||  |||||| |||||| ||||||||||    
T  29087562 agcccagaaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccctcg 29087463  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaa 214  Q
    |||  |||||| |||||||  |||||| | |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  29087462 cccccggtacaacagagaattaccaaaacaagtcaaacaaagattgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 29087364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 38 - 191
Target Start/End: Original strand, 7392053 - 7392205
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||| ||  ||||||| || |||||||||||| |||| |||||| |||||||| |    
T  7392053 aaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaaca 7392152  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    ||||||| || ||||| ||||||||||||||||  | |||||||||||||||||    
T  7392153 ccaaatcaagccaaac-aagattgcagctagacaccaactcccgatctcgaagc 7392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 13954234 - 13954441
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||| |  |||| | |||||||||||||||||||||||| ||| ||||||||||||| ||  ||||||| || | ||||||||||     
T  13954234 agcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag-aaggcacccctca 13954332  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    || | ||||||||||||||| || ||||| |||||||  ||||||||||||||||  ||||||  ||||||||||| |||  |||||||||||| |||||    
T  13954333 ccttcggtacaccagagaaacacaaaatcaagtcaaa-taagattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaac 13954431  T
Q  216 cggcacacaa 225  Q
    | ||| ||||    
T  13954432 cagcatacaa 13954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 7195261 - 7195429
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||| ||   |||||| || |||||||||||| ||| |||||||||||||||| |    
T  7195261 aaagaactgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctcaccc-tggtacaccagagaaaca 7195359  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccac 208  Q
    | |||||  | ||||| || ||||||||||| |  ||||||||||||||||||| |||  ||| |||||||    
T  7195360 ctaaatcacgccaaac-aatattgcagctagccaccgactcccgatctcgaagcaaaagtaactggcccac 7195429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 25992067 - 25991936
Alignment:
Q  37 taaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaa 136  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  |||||| ||| ||||||| ||||  | | ||||||||||| |||     
T  25992067 taaagaactgactctcgatctcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcactcctcatcttcggtacaccagaaaaac 25991968  T
Q  137 accaaatccagtcaaacaaagattgcagctaga 169  Q
    | ||||||  ||||||| |||||||||||||||    
T  25991967 atcaaatcgtgtcaaac-aagattgcagctaga 25991936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 8297527 - 8297358
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||   ||  ||||||||  || ||  ||||||| || |||||||||||| |||| ||||||| ||||||| |    
T  8297527 aaagaactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccctcggtacactagagaaaca 8297428  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccac 208  Q
    ||||||| ||  ||||||| |||||||||||||  | |||| |||||||||||| |||  || ||||||||    
T  8297427 ccaaatcaagcaaaacaaa-attgcagctagacaccaactctcgatctcgaagcaaaagtaatcggcccac 8297358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 33258904 - 33259050
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||| ||||| |||||||||||||||| ||| ||||||||||||| ||  ||||||  || ||| |||||||| || | ||||||||||||||| |    
T  33258904 aaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaaaca 33259003  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatct 185  Q
    |||||||  | ||||| ||||||| |||||||   |||||||||||||    
T  33259004 ccaaatcgcgccaaac-aagattgtagctagataccgactcccgatct 33259050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 235
Target Start/End: Original strand, 17854096 - 17854287
Alignment:
Q  45 tgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatc 144  Q
    |||||||||||||||| ||||||||| | ||||||||| |||  || |||||||||| |||||||||||| |||  ||| |||||||| || |||  | |    
T  17854096 tgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccaccagaggaacaccctagc 17854195  T
Q  145 cagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatg-aaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    ||| ||||  ||||||| |||||||   | |||||||||||| |||| ||| | ||  ||||||||| || || ||||||||| ||||||||    
T  17854196 cagccaaaacaagattgtagctagagaccaactcccgatctcaaagcaaaaagtaaatggcccaccagaatccagcacacaatttgtaagac 17854287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 14302430 - 14302638
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||||   ||||||||||||||| |||||||| |||||| |||  | |||||||||| ||  ||||||  || |||||| |||||     
T  14302430 agcccaaaaccaaacttgctccaaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctca 14302529  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||| | ||||||||||||| |||| |||  | |||||  || ||||||||||||   |||||||||||||||||| |||  ||| || || ||| ||||    
T  14302530 ccctcgatacaccagagaaacaccagatcacgccaaac-tagcttgcagctagacacggactcccgatctcgaagcaaaagtaacggggcccccagaaac 14302628  T
Q  216 cggcacacaa 225  Q
    | ||||||||    
T  14302629 cagcacacaa 14302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 8730976 - 8730901
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccct 113  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||  || ||||||| |  |||||||||||    
T  8730976 aaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacccct 8730901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 235
Target Start/End: Original strand, 24072288 - 24072484
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||| |||||||| |||||||||||||  ||| |||||||| ||  ||||||| || ||||||||||   |||| ||| ||||||||||| |    
T  24072288 aaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcaccccaaaccctcggtccaccagagaaaca 24072387  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    |   | | |  ||||| |||||| |||||| ||  | ||||||||||| ||||| |||  ||||||||||| | || || |||||||| |||||||||    
T  24072388 ctgtagctatccaaac-aagattacagctaaacgccaactcccgatcttgaagcaaaagtaaccggcccactagaatccagcacacaacatgtaagac 24072484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 22675324 - 22675394
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||| | |||||| |  |||||||||||||||||||||||||||||| |||| || ||||||||||    
T  22675324 agcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagact 22675394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 29087350 - 29087284
Alignment:
Q  295 aacgtgacacgaacccgccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||| |||||| | || |||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  29087350 aacgggacacgcatcctccaaactccgtaaacacctaaaccacccaaaaaacacaaacaagagctag 29087284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 361
Target Start/End: Original strand, 26046069 - 26046309
Alignment:
Q  121 ggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggca 220  Q
    ||||||||||||||| ||||||||  | |||| || |||||||||||| |  ||||||||| ||||||||| |||| || | |||||||| ||||  |||    
T  26046069 ggtacaccagagaaacaccaaatcacgccaaataa-gattgcagctagccaccgactcccggtctcgaagcaaaattaatctgcccaccagaaactagca 26046167  T
Q  221 cacaatatgtaagacgaaagacatggcaagc-gaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaactc 319  Q
    ||||| | ||| ||| || ||||||  | || |  ||  |||||||||||| |||||||| | ||||||||  ||||| |||| ||   || | |||| |    
T  26046168 cacaaaaagtatgacaaacgacatgatatgcggtggtgcaaacaacaaacatatcaaaagaagaaggctcagtgcaacatgacccgcttcctctaaacac 26046267  T
Q  320 cgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |  ||||||||||| ||||| |||| ||||||||| ||||||    
T  26046268 cctaaacacctaaaacaccccaaaaacacaaacaagagctag 26046309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 227
Target Start/End: Original strand, 39184209 - 39184397
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||| | |  | ||||| || ||||||||||   || | ||| ||||||||||| |    
T  39184209 aaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcaccccaaaccgtcggttcaccagagaaaca 39184308  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaata 227  Q
    |     |||  ||||| ||||||||| ||||||  | ||||||||||||||| | |||  |||| |||||||| || || ||||||||||    
T  39184309 ctgtcgccaaccaaac-aagattgcaactagacgccaactcccgatctcgaatcaaaagtaacctgcccaccagaatccagcacacaata 39184397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 31721734 - 31721695
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggccca 79  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31721734 agaactgactcccgatctcgaatcaaaagcgatcggccca 31721695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 27713150 - 27713080
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||| | |||||| |  |||||||||| ||||||||||||||||||| |||| ||||||| |||||    
T  27713150 agcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagact 27713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 39024472 - 39024506
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgat 72  Q
    |||||| ||||||||||||||||||||||||||||    
T  39024472 aaagaagtgactcccgatctcgaatcaaaagcgat 39024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 21402859 - 21402903
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||    
T  21402859 aaagaactgactcccgatctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 25658173 - 25658217
Alignment:
Q  36 ttaaagaactgactcccgatctcgaatcaaaagcgataggcccac 80  Q
    |||||||||||||||||  ||| |||||||||||||| |||||||    
T  25658173 ttaaagaactgactcccagtctagaatcaaaagcgatcggcccac 25658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 20611864 - 20611519
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||  ||| |||||| || |||||| ||| |||||||||||||||||||||    
T  20611864 agcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcg 20611765  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||||| |||||    
T  20611764 cccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaaac 20611665  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    | |||||||||||||||||||||| |||| ||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  20611664 cagcacacaatatgtaagacgaaaaacatagcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgacacgcaccctccaa 20611565  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||| || |||||||||||| ||||||||||||||||||| ||||||    
T  20611564 acttcgtaaacacctaaactacccaaaaagcacaaacaagagctag 20611519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 45 - 361
Target Start/End: Original strand, 34475783 - 34476098
Alignment:
Q  45 tgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatc 144  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||||||| |||| |    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgcccccggtacaccagagaaaaatcaaacc 34475882  T
Q  145 cagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacgaaagacat 244  Q
     ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||| |||||| ||||||||||| |||||||     
T  34475883 aagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccagcacacgatatgtaagacaaaagacaa 34475982  T
Q  245 ggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaactccgaaaacacctaaaccacccaaaaa 344  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||  |||| |||||||||| ||||||||||||||| ||||||    
T  34475983 ggcatgcgaagtttaaacaacaaacaaatccaaaggaaaaggctcaa-acaacgtgacacccaccctccaaactccgtaaacacctaaaccactcaaaaa 34476081  T
Q  345 gcacaaacaaaagctag 361  Q
    |||||||||| ||||||    
T  34476082 gcacaaacaagagctag 34476098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 84 - 361
Target Start/End: Complemental strand, 47235729 - 47235451
Alignment:
Q  84 actataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgat 183  Q
    |||||| | ||||||||||||||||||||||||||  |||||||  ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||    
T  47235729 actatagtcccaaattagcagggcacccctcgcccccggtacactggagaaaaaccaaaccaagtcaaacaaagattgcagctagaccctgactcccgat 47235630  T
Q  184 ctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaa 283  Q
    |||||||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  47235629 ctcgaagccaaatgaaccggcccatcgaaaaccagcacacattatgtaagacgaaagacatggcgtgcgaagtttaaacaacaaacaaatcaaaaggaaa 47235530  T
Q  284 aggctcaacgcaacgtgacacgaacccgccaaactccgaaaacacctaaaccaccca-aaaagcacaaacaaaagctag 361  Q
    ||||||||| |||||||||||| |||| |||||||||| |||||||||||||||||| |||| ||||||||| ||||||    
T  47235529 aggctcaacacaacgtgacacgcaccctccaaactccgtaaacacctaaaccacccaaaaaaacacaaacaagagctag 47235451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 361
Target Start/End: Complemental strand, 19176583 - 19176239
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||  |||||||||||||||||||| ||     
T  19176583 agcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccc-tca 19176485  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    | |  |||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| ||||||| |||||    
T  19176484 ctcccggtacatcagagaaaaaccaaattaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaaac 19176385  T
Q  216 cggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaa 315  Q
    | |||||||||| |||||| ||||||||||||| | ||||||||| |||||||||||||| |||||||| |||| || ||| | |||||   ||| ||||    
T  19176384 cagcacacaataagtaagaggaaagacatggcatgtgaagtttaaccaacaaacaaatcacaaggaaaaagctccacacaaagggacacactccctccaa 19176285  T
Q  316 actccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    |||||| |||||||||||||| |||||| |||||||||| ||||||    
T  19176284 actccgtaaacacctaaaccatccaaaaggcacaaacaagagctag 19176239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 354
Target Start/End: Original strand, 2394255 - 2394596
Alignment:
Q  18 cccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcc 117  Q
    |||||||||||||||  |  |||||||||||| || ||||||||||||||| ||| || ||||||| ||||| |||||||||||||||||||||||||||    
T  2394255 cccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcc 2394354  T
Q  118 cttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccg 217  Q
    |  |||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| | ||||||     
T  2394355 cccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaacca 2394454  T
Q  218 gcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgaca----cgaacccgcc 313  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||| |||| | || |||||||    |   ||| ||    
T  2394455 gcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactcaccacagcgtgacacccccccccccccc 2394554  T
Q  314 aaactccgaaaacacctaaaccaccca-aaaagcacaaacaa 354  Q
    |||||||| |||||||||||||||| | ||||||| ||||||    
T  2394555 aaactccgtaaacacctaaaccaccaagaaaagcataaacaa 2394596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 11 - 290
Target Start/End: Original strand, 2392501 - 2392780
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||  |  |||||||||||| || ||||||||||||||| ||| || ||||||| ||||| ||||||||||||||||||||    
T  2392501 cacaaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacc 2392600  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    ||||||||  |||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |     
T  2392601 cctcgcccccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcg 2392700  T
Q  211 aaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctca 290  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||| ||||    
T  2392701 aaaaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactca 2392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 45163941 - 45163591
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccacc--agactataataccaaattagcagggca 108  Q
    |||| |||||||||||||||||  |  ||| |||||||| | |||||||||||||||| ||| |||||||   |||||||| ||||||||||||||||||    
T  45163941 cacaaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggca 45163842  T
Q  109 cccctcgcccttggtaca----ccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggc 204  Q
    ||||||||||| ||||||    | ||||||||| |||| | |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  45163841 cccctcgccctcggtacatgcactagagaaaaatcaaaccaagtcaaacaaagattgcagctagaccccgacttccgatcttgaagccaaatgaaccggc 45163742  T
Q  205 ccaccaaaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacac 304  Q
    | | |||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||| ||| |||||| || |||||| |    
T  45163741 ctatcaaaaaccagcacacaatatgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaataaaaaggacaagactcaacacagcgtgacgc 45163642  T
Q  305 gaacccgccaaactccgaaaacacctaaaccaccca-aaaagcacaaacaa 354  Q
    | | || | |||||| | |||||||||||||||||| ||||||||||||||    
T  45163641 gcaacccctaaactcggtaaacacctaaaccacccagaaaagcacaaacaa 45163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 23328354 - 23328567
Alignment:
Q  20 caaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgccct 119  Q
    |||||||||||||| |  ||| | || |||||||||||||||||||||| ||| || |||||| ||| ||  ||||||| | |||||||||||||||||     
T  23328354 caaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccc 23328453  T
Q  120 tggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggc 219  Q
     |||||||||||| || |||| ||| ||||||||||| |||||||||||||  | ||||||||||||||||| |||  |||||||||| |  | ||| ||    
T  23328454 cggtacaccagag-aacaccatatcaagtcaaacaaa-attgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggacaccagc 23328549  T
Q  220 acacaatatgtaagacga 237  Q
    ||||||||||||||||||    
T  23328550 acacaatatgtaagacga 23328567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 40023572 - 40023799
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||  |  ||||||  ||||||||||||||||||||||| ||| || |||||||||| ||| || |||| ||||||||| ||||||    
T  40023572 agcccaaaaaccaacttaagccaaagaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggca-ccctcg 40023670  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaac 215  Q
    |||  ||||||| |||| || |||| ||| |||||||  | ||||||||||||||  | ||| ||||||||||||| |||  |||||| |||||  | ||    
T  40023671 cccccggtacactagag-aacaccatatcaagtcaaaacatgattgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccggacac 40023769  T
Q  216 cggcacacaatatgtaagacgaaagacatg 245  Q
    |   |||||||||||||||||| |||||||    
T  40023770 caatacacaatatgtaagacgatagacatg 40023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 17551043 - 17550964
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataa 90  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  17551043 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactataa 17550964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 207
Target Start/End: Complemental strand, 25647743 - 25647575
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||  |||||||||||||||||||||| |||||||||  |||||| ||  ||||||| || ||||||||| || | |  ||||||||||||||| |    
T  25647743 aaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtacaccagagaaaca 25647644  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
    |||||||  | |||||| | |||||||||||||  ||||||||| ||||||||| |||  ||||||||||    
T  25647643 ccaaatcacgccaaacaga-attgcagctagacaccgactcccgttctcgaagcaaaagtaaccggccca 25647575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 37123441 - 37123289
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| | | ||  ||||||  |  |||||||||||| || | |||||| |||||||| |    
T  37123441 aaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaaca 37123342  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    |||||||  | |||||||| |||||||||||||  |||||||||||||||||||    
T  37123341 ccaaatcacgccaaacaaa-attgcagctagacaccgactcccgatctcgaagc 37123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 14755287 - 14755453
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||| ||  || |||  |  |||||||||||| || | ||||||||||||||| |    
T  14755287 aaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaaaca 14755384  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
    ||||| |  |  |||| |||||||||||||||   ||||||||||||||||||| |||  ||||||||||    
T  14755385 ccaaaacgcgcgaaac-aagattgcagctagataccgactcccgatctcgaagcaaaagtaaccggccca 14755453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 9584053 - 9584148
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcaccc 111  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||||||||||| ||| |  |||||||||| || || ||||||||||||||||||    
T  9584053 agcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccc 9584148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 45398877 - 45398776
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||   | ||||| ||||||| ||||||||||||||||| ||| || |||||||||| |||  |||||| ||||||||||||||||    
T  45398877 agcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccctcg 45398778  T
Q  116 cc 117  Q
    ||    
T  45398777 cc 45398776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 43012452 - 43012372
Alignment:
Q  20 caaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaatta 100  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| ||| || |||||||||| ||  |||||||||    
T  43012452 caaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaatta 43012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 5556629 - 5556555
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccc 112  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| || ||||||| |  ||||||||||    
T  5556629 aaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcacccc 5556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 4463997 - 4464132
Alignment:
Q  77 ccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgac 176  Q
    |||||||||| |||  |||||| || |||||||||||| |||| ||||||| ||||||| ||||||||  | || |||| ||||||| ||||||  ||||    
T  4463997 ccaccagactttaaggccaaatcagaagggcacccctcaccctcggtacac-agagaaacaccaaatcacgccacacaa-gattgcaactagacaccgac 4464094  T
Q  177 tcccgatctcgaagccaaatgaaccggcccaccaaaaa 214  Q
    ||||||||||||||| |||  |||||||||||| ||||    
T  4464095 tcccgatctcgaagcaaaagtaaccggcccaccgaaaa 4464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 235
Target Start/End: Complemental strand, 27399013 - 27398821
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaa 141  Q
    |||||||||| || |||||||| |||||||| |  |||||||||| |   |||||| ||| ||||||||| || | | |||| ||| ||||||| ||||     
T  27399013 aactgactcctgacctcgaatctaaagcgattgtgccaccagactttcggaccaaaatagaagggcacccatctcgcctggtccactagagaaacaccat 27398914  T
Q  142 atccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagac 235  Q
    | |||| ||||||| ||||| ||||||||    ||||||||||||||||| |||  ||| ||  ||||| || || ||||||||||||||||||    
T  27398913 agccagccaaacaa-gattgtagctagacacaaactcccgatctcgaagcaaaaataactggtgcaccagaatccagcacacaatatgtaagac 27398821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 30127319 - 30127273
Alignment:
Q  40 agaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  30127319 agaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 30935416 - 30935618
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaa 141  Q
    |||| ||||||||||| ||||||||||||||  |||||||| |||  || ||||||| || |||||||||||  |||  ||| ||||||||||| ||       
T  30935416 aactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccccttacccccggtccaccagagaaacactgt 30935515  T
Q  142 atccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacgaaaga 241  Q
    | |||  ||||  || | ||| |||||||  | |||||| |||||||||| |||| |||||||||| || || || |||||||| | |||||||| | ||    
T  30935516 agccaaccaaaacaataatgccgctagacgccaactcccaatctcgaagcaaaat-aaccggcccatcagaatccagcacacaacaagtaagacggatga 30935614  T
Q  242 catg 245  Q
    ||||    
T  30935615 catg 30935618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 14193999 - 14193846
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaa-aa 136  Q
    ||||||| ||||||| ||||||||||||||| ||| || || ||||||| ||  ||||||| || |||||||||||| | |  ||||||||| |||| |     
T  14193999 aaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggaccaaatcagaagggcacccctcactcccggtacaccaaagaacac 14193900  T
Q  137 accaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagc 191  Q
    ||||||||  | ||| || | |||| ||||||||  ||||||||||| |||||||    
T  14193899 accaaatcacgccaagcaga-attgtagctagacaccgactcccgatatcgaagc 14193846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 14879491 - 14879421
Alignment:
Q  41 gaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcaccc 111  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||| ||  ||| ||| || |||||||||    
T  14879491 gaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 31482970 - 31482868
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||| ||||||   || ||||  ||| |||||||||||||||||||| |||  |||| ||||||||||  |||||||||| |||| |||    
T  31482970 cacaaagcccaaaaatcaacttaattttaagatttgattcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtagggtacc 31482871  T
Q  111 cct 113  Q
    |||    
T  31482870 cct 31482868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 47945787 - 47945717
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||| | |||||| |  ||| ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  47945787 agcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggact 47945717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 31424295 - 31424247
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||| |||||||||||||||||||||||||||||  |||| ||||||||    
T  31424295 aaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagact 31424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 33143971 - 33144019
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||||||| ||| |  ||||||||||    
T  33143971 aaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagact 33144019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 39021298 - 39021342
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||    
T  39021298 aaagaactgactcccgacctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 47235784 - 47235729
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaa 66  Q
    |||| |||||||||||||||||  || ||||||| ||||| |||||||||||||||    
T  47235784 cacaaagcccaaaaaccaacttaagtcaaagaaccgactctcgatctcgaatcaaa 47235729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 20710740 - 20710778
Alignment:
Q  48 ctcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagact 20710778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 19295891 - 19295935
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||| ||| ||||| |||||||||||| |||||||||||||||||    
T  19295891 aactaacttccgatatcgaatcaaaagtgataggcccaccagact 19295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 24099353 - 24099397
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||| ||||||| |||||||||||| ||| |||||||||||||    
T  24099353 aactgattcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 361
Target Start/End: Original strand, 35772 - 36117
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    |||||||||||||||||  || |||||| |||||||||||||||||||||||| ||| ||||||| ||||||||  |||||||||||  |||||||||||    
T  35772 agcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccctcg 35870  T
Q  116 cccttggtacaccagagaaaaaccaaa-tccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaa 214  Q
    |||  |||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||     
T  35871 cccccggtacaccagagaaaaaccaaaattaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaag 35970  T
Q  215 ccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgcca 314  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||  ||    
T  35971 ccagcacacaatatgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgacactcacccttca 36070  T
Q  315 aactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||||| | ||||||||||||||||||||| ||| |||||| ||||||    
T  36071 aactctgtaaacacctaaaccacccaaaaggcataaacaagagctag 36117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 361
Target Start/End: Complemental strand, 3117579 - 3117229
Alignment:
Q  11 cacagagcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacc 110  Q
    |||| |||||||||||||||||| || |||||||||||||||||||| |||||||||| ||| ||||||||| ||||||  | |||||||||||||||||    
T  3117579 cacaaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacc 3117480  T
Q  111 cctcgcccttggtacaccagagaaaaaccaaatccagtc-aaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    ||||||||  || ||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||     
T  3117479 cctcgcccccggaacaccagagaaaaaccaaatcaagtcaaaacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccact 3117380  T
Q  210 aaaaaccggcacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacc 309  Q
     ||||||  |||||||||||||||| ||||||||||||| || ||| || |||||||||||||| |||| ||||| ||||||| ||| |||||||  |||    
T  3117379 gaaaaccaacacacaatatgtaagatgaaagacatggcatgcaaagattgaacaacaaacaaat-aaaaagaaaaagctcaacacaatgtgacacacacc 3117281  T
Q  310 cgccaaactccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    | |||||||||  ||||||||||||||||| |||||||||||||| ||||||    
T  3117280 ctccaaactccataaacacctaaaccacccgaaaagcacaaacaagagctag 3117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 19 - 361
Target Start/End: Original strand, 16510304 - 16510638
Alignment:
Q  19 ccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgccc 118  Q
    ||||||||||||||| || ||||||||||||| | ||||||||||||||| ||| ||||||| ||||| ||  |||||||||||||||||||||| ||||    
T  16510304 ccaaaaaccaacttgagtaaaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccc 16510403  T
Q  119 ttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccgg 218  Q
    | |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||| | |||||       
T  16510404 tcggtacaccagagaaaaaccatatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggcccaacgaaaac--- 16510500  T
Q  219 cacacaatatgtaagacgaaagacatggcaagcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacgcaacgtgacacgaacccgccaaact 318  Q
        || |||||||||| |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| |||||  ||||| |||| |||||||    
T  16510501 ----cattatgtaagacaaaagacatggcatgcgaag-taaaacaacaaacaaatcaaaaggaaaaggctcaacacaacggaacacgcaccctccaaact 16510595  T
Q  319 ccgaaaacacctaaaccacccaaaaagcacaaacaaaagctag 361  Q
    ||  ||||||||||||||||| ||||||| |||||| ||||||    
T  16510596 ccataaacacctaaaccacccgaaaagcagaaacaagagctag 16510638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 20701825 - 20701993
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||| |||||||||||||||||||||| ||| ||| |||||| ||| |  ||||||| || |||||||||||| |||  |||||||||||||||||    
T  20701825 aaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacaccagagaaaaa 20701924  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
    |||||||  | ||||||||  ||||||||||||  ||| |||||||||| |||| |||  ||||||||||    
T  20701925 ccaaatcacgccaaacaaa-tttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggccca 20701993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 9224100 - 9223930
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||  ||||| |||  |||||| ||||| |||  ||| ||||| || || |    
T  9224100 aaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggca-ccctcacccccggtccaccaaaggaaca 9224002  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacca 210  Q
    |||||  | ||||||  ||||||||||  ||||  | ||||||||||||||||| |||| |||||||||||||    
T  9224001 ccaaagtcggtcaaaacaagattgcagaaagacaccaactcccgatctcgaagcaaaat-aaccggcccacca 9223930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 3880623 - 3880775
Alignment:
Q  56 ctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaa 155  Q
    ||||||||||||| ||| ||||||||| ||| ||  ||||||| || |||||||| ||| |||| |||| |||||||||| ||||||||  | ||||| |    
T  3880623 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaac-a 3880721  T
Q  156 agattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    |||| ||||||||||  |||||||||||||| |||| |||  ||| ||||||||    
T  3880722 agatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccacc 3880775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 234
Target Start/End: Original strand, 32935362 - 32935556
Alignment:
Q  39 aagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaac 138  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  |  ||||||| || |||| ||||||| |||  | | || || ||||| ||    
T  32935362 aagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcacccccgatccatcatagaaacac 32935461  T
Q  139 caaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaaga 234  Q
    || | | || ||||  ||||||||||||||||  | ||| | |||||| |||| |||  ||||| ||||||  || || |||||||||||||||||    
T  32935462 cataacaagccaaa-gaagattgcagctagacaccaacttctgatctcaaagcaaaagtaaccgacccaccggaatccagcacacaatatgtaaga 32935556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 15132609 - 15132732
Alignment:
Q  102 cagggcacccctcgcccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaacc 201  Q
    |||||||||||||||||   ||||| ||||||| | ||| ||| |||||||||  |||||||||||| |  ||||||||||||||||||| |||  ||||    
T  15132609 cagggcacccctcgcccccagtacatcagagaaca-ccatatcaagtcaaacag-gattgcagctagtcaccgactcccgatctcgaagcaaaagtaacc 15132706  T
Q  202 ggcccaccaaaaaccggcacacaata 227  Q
    |||||||| ||||||  |||||||||    
T  15132707 ggcccaccgaaaaccatcacacaata 15132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 26216042 - 26216089
Alignment:
Q  39 aagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  26216042 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 26216089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 33968635 - 33968732
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaa 135  Q
    |||||||||||||||||||||||||||||||||||   ||||| |||||| |  ||||||| || ||| ||||||   |||| ||| |||||||||||    
T  33968635 aaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccaccccataccctcggttcaccagagaaa 33968732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 26534742 - 26534789
Alignment:
Q  39 aagaactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  26534742 aagaactgactcccaatctcgaatcaaaagtgatcggcccaccagact 26534789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 21266168 - 21266127
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccag 83  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  21266168 aactaactcccgatctcgaatcaaaagcgatcggcccaccag 21266127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 34105468 - 34105428
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccacca 82  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  34105468 aactgactcccgatctcgaatcaaaagtgatcggcccacca 34105428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 34090418 - 34090374
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||  ||| | |||||||||||    
T  34090418 aactgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 207
Target Start/End: Complemental strand, 19464 - 19273
Alignment:
Q  16 agcccaaaaaccaacttgcgttaaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcg 115  Q
    ||||||||| | |||||| |  |||||||||||| |||||||||||||||||| ||| ||||||||||||| ||  ||||||| || ||||||||||||     
T  19464 agcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctca 19365  T
Q  116 cccttggtacaccagagaaaaaccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
    || |||||| |||||||||| | |||||  || ||||  |||| |||||||||||  ||||||||||||||||||| |||| ||||| ||||    
T  19364 cctttggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacaccgactcccgatctcgaagcaaaattaaccgaccca 19273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 42160 - 42329
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||| ||  || |||| || |||||||||||| || |||||| |||||||||| |    
T  42160 aaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtataccagagaaaca 42259  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggccca 207  Q
     |||||  || ||||  |||| ||||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  42260 tcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgaccca 42329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 209
Target Start/End: Complemental strand, 36766 - 36596
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||| |||  |||| ||||||| ||  ||||||| || |||||||||||| | || ||||||||||||||| |    
T  36766 aaagaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccagagaaaca 36667  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccacc 209  Q
    |||||||  | |||||||| |||||||||||||  ||||||| ||||||||| | |||| || |||||||||    
T  36666 ccaaatcacgccaaacaaa-attgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccacc 36596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 245
Target Start/End: Original strand, 1039 - 1244
Alignment:
Q  38 aaagaactgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaa 137  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  |  ||||||| || |||| |||||||   |   || ||||||||||| |    
T  1039 aaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaaca 1137  T
Q  138 ccaaatccagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcccaccaaaaaccggcacacaatatgtaagacga 237  Q
    |||||  || |||||| ||||||||||||||||  | |||||| |||||||||| |||  || |||||||| | || || |||||||||||||||||| |    
T  1138 ccaaaatcaatcaaac-aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagacaa 1236  T
Q  238 aagacatg 245  Q
    | ||||||    
T  1237 acgacatg 1244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 58179 - 58020
Alignment:
Q  45 tgactcccgatctcgaatcaaaagcgataggcccaccagactataataccaaattagcagggcacccctcgcccttggtacaccagagaaaaaccaaatc 144  Q
    ||||| ||||||| |||||||||| ||| ||||||||| ||| ||  |||||||  | ||||||||   | |||| ||||||||||||||| ||||||||    
T  58179 tgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccatacaccctaggtacaccagagaaacaccaaatc 58080  T
Q  145 cagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcc 205  Q
      | ||||| ||||||||||||||||  ||||||||||||||||||| |||  ||||||||    
T  58079 acgccaaac-aagattgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcc 58020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 3885 - 3841
Alignment:
Q  42 aactgactcccgatctcgaatcaaaagcgataggcccaccagact 86  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||    
T  3885 aactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

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