View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15815_low_3 (Length: 212)

Name: NF15815_low_3
Description: NF15815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15815_low_3
NF15815_low_3
[»] chr1 (16 HSPs)
chr1 (1-183)||(18059597-18059780)
chr1 (1-183)||(17004872-17005055)
chr1 (1-183)||(19962338-19962521)
chr1 (1-179)||(38054930-38055109)
chr1 (1-185)||(17148799-17148985)
chr1 (38-212)||(22035652-22035827)
chr1 (38-212)||(7640810-7640985)
chr1 (2-183)||(22228042-22228226)
chr1 (41-183)||(22232739-22232882)
chr1 (12-183)||(5072237-5072406)
chr1 (38-185)||(46523621-46523768)
chr1 (80-166)||(45051673-45051757)
chr1 (80-179)||(2116492-2116589)
chr1 (12-111)||(15861258-15861358)
chr1 (118-183)||(18601071-18601136)
chr1 (32-102)||(18598845-18598914)
[»] chr7 (23 HSPs)
chr7 (1-185)||(2437689-2437873)
chr7 (1-183)||(7822962-7823145)
chr7 (1-183)||(7830273-7830456)
chr7 (1-183)||(27176667-27176850)
chr7 (1-183)||(27101476-27101659)
chr7 (1-183)||(27108824-27109007)
chr7 (1-183)||(38783568-38783751)
chr7 (1-185)||(13910862-13911044)
chr7 (12-183)||(10989643-10989814)
chr7 (1-182)||(16478801-16478979)
chr7 (12-183)||(15950641-15950813)
chr7 (12-183)||(13572910-13573079)
chr7 (12-183)||(18979872-18980043)
chr7 (12-185)||(15927800-15927973)
chr7 (12-183)||(15759963-15760136)
chr7 (80-212)||(10000288-10000421)
chr7 (80-212)||(16418702-16418835)
chr7 (38-185)||(13758602-13758750)
chr7 (12-185)||(14250748-14250922)
chr7 (80-162)||(15862174-15862257)
chr7 (80-162)||(18253761-18253844)
chr7 (37-111)||(15516719-15516793)
chr7 (80-182)||(48622584-48622687)
[»] scaffold0139 (2 HSPs)
scaffold0139 (2-185)||(20953-21136)
scaffold0139 (2-163)||(13899-14060)
[»] chr6 (25 HSPs)
chr6 (1-183)||(22251405-22251588)
chr6 (1-182)||(22225577-22225759)
chr6 (1-183)||(16376212-16376395)
chr6 (1-183)||(16383536-16383719)
chr6 (1-183)||(10488933-10489116)
chr6 (1-180)||(16555978-16556158)
chr6 (1-180)||(16632534-16632714)
chr6 (1-183)||(19299471-19299654)
chr6 (1-183)||(27653821-27654001)
chr6 (12-212)||(29869627-29869827)
chr6 (37-193)||(25175787-25175945)
chr6 (12-183)||(16232126-16232297)
chr6 (12-183)||(19610252-19610425)
chr6 (12-183)||(1556239-1556412)
chr6 (29-185)||(18086690-18086847)
chr6 (91-183)||(16825678-16825770)
chr6 (38-185)||(23978001-23978149)
chr6 (1-111)||(14625968-14626076)
chr6 (80-182)||(1650022-1650122)
chr6 (80-185)||(13620712-13620818)
chr6 (38-111)||(4991396-4991470)
chr6 (2-96)||(16814837-16814930)
chr6 (12-153)||(1657593-1657738)
chr6 (12-153)||(15862744-15862889)
chr6 (84-181)||(29666109-29666208)
[»] chr5 (28 HSPs)
chr5 (1-183)||(21932220-21932403)
chr5 (1-183)||(21938390-21938573)
chr5 (1-183)||(18777830-18778010)
chr5 (1-183)||(35582270-35582453)
chr5 (1-181)||(36989609-36989790)
chr5 (1-183)||(22882923-22883106)
chr5 (1-183)||(19500133-19500312)
chr5 (1-183)||(21073433-21073613)
chr5 (1-183)||(22366318-22366499)
chr5 (1-183)||(10777809-10777992)
chr5 (1-183)||(12608-12788)
chr5 (1-185)||(4199823-4200005)
chr5 (37-183)||(25426862-25427009)
chr5 (1-182)||(29188123-29188301)
chr5 (29-183)||(43443261-43443413)
chr5 (2-183)||(11211902-11212087)
chr5 (2-183)||(17471427-17471610)
chr5 (38-212)||(23328762-23328937)
chr5 (38-212)||(24616366-24616541)
chr5 (38-212)||(24712742-24712917)
chr5 (38-212)||(24745760-24745935)
chr5 (12-183)||(27010075-27010244)
chr5 (12-183)||(35790947-35791120)
chr5 (12-183)||(7425558-7425729)
chr5 (14-183)||(23514795-23514966)
chr5 (38-183)||(1219396-1219542)
chr5 (1-111)||(11343008-11343118)
chr5 (1-111)||(16105967-16106077)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-183)||(31543-31726)
scaffold0107 (128-183)||(39880-39935)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-183)||(39337-39520)
scaffold0076 (1-183)||(43231-43411)
[»] chr8 (18 HSPs)
chr8 (1-183)||(271199-271382)
chr8 (1-183)||(644538-644721)
chr8 (1-183)||(830273-830456)
chr8 (1-183)||(15318998-15319181)
chr8 (1-183)||(15499367-15499550)
chr8 (1-183)||(22088633-22088816)
chr8 (1-183)||(30120956-30121137)
chr8 (1-182)||(6774098-6774275)
chr8 (1-182)||(24549216-24549394)
chr8 (11-183)||(21851813-21851983)
chr8 (12-183)||(22006107-22006280)
chr8 (11-183)||(21844420-21844590)
chr8 (12-185)||(13720777-13720952)
chr8 (12-183)||(13662114-13662287)
chr8 (38-162)||(16195486-16195611)
chr8 (38-185)||(16872927-16873075)
chr8 (29-182)||(16674258-16674409)
chr8 (14-153)||(17345842-17345985)
[»] chr3 (23 HSPs)
chr3 (1-183)||(1467578-1467761)
chr3 (1-183)||(12264630-12264814)
chr3 (1-183)||(49232670-49232853)
chr3 (1-183)||(12812075-12812258)
chr3 (2-183)||(22275443-22275626)
chr3 (2-183)||(16821373-16821553)
chr3 (12-183)||(41270309-41270478)
chr3 (12-183)||(55316453-55316622)
chr3 (12-188)||(15468189-15468367)
chr3 (12-185)||(18911225-18911400)
chr3 (12-183)||(18896893-18897066)
chr3 (12-183)||(25058973-25059146)
chr3 (12-159)||(5228570-5228719)
chr3 (80-166)||(15615084-15615168)
chr3 (80-183)||(12902008-12902112)
chr3 (80-162)||(15938395-15938478)
chr3 (38-183)||(54651691-54651837)
chr3 (80-162)||(15936553-15936636)
chr3 (12-111)||(14842419-14842519)
chr3 (12-111)||(23492696-23492796)
chr3 (38-112)||(8268609-8268683)
chr3 (38-112)||(8275709-8275783)
chr3 (80-185)||(44229217-44229323)
[»] chr2 (20 HSPs)
chr2 (1-183)||(11231177-11231360)
chr2 (1-183)||(22513024-22513207)
chr2 (1-183)||(24685620-24685803)
chr2 (1-183)||(28775646-28775829)
chr2 (1-183)||(19886499-19886679)
chr2 (38-212)||(23774341-23774516)
chr2 (12-183)||(16935827-16936000)
chr2 (12-183)||(17006487-17006660)
chr2 (38-185)||(8944078-8944226)
chr2 (12-185)||(42177818-42177993)
chr2 (38-183)||(12728626-12728772)
chr2 (41-185)||(3798482-3798627)
chr2 (80-212)||(5888548-5888681)
chr2 (38-183)||(34824709-34824855)
chr2 (38-185)||(12635744-12635892)
chr2 (38-185)||(12641518-12641666)
chr2 (80-183)||(23777963-23778067)
chr2 (1-111)||(24826538-24826646)
chr2 (38-111)||(25213372-25213446)
chr2 (126-185)||(21142127-21142187)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-183)||(169748-169930)
scaffold0023 (8-184)||(36326-36501)
scaffold0023 (12-183)||(153856-154029)
[»] scaffold0183 (1 HSPs)
scaffold0183 (29-212)||(6802-6986)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-184)||(31513-31694)
[»] chr4 (18 HSPs)
chr4 (12-212)||(22351915-22352115)
chr4 (1-183)||(10644453-10644632)
chr4 (38-212)||(26339224-26339399)
chr4 (12-183)||(18169204-18169375)
chr4 (12-185)||(7131914-7132089)
chr4 (12-183)||(47357888-47358057)
chr4 (12-182)||(17145506-17145678)
chr4 (12-183)||(15287096-15287267)
chr4 (29-183)||(15294221-15294376)
chr4 (38-185)||(20000955-20001103)
chr4 (68-183)||(18248452-18248568)
chr4 (80-183)||(19020720-19020824)
chr4 (89-183)||(8378385-8378480)
chr4 (12-112)||(14996444-14996545)
chr4 (12-111)||(14952085-14952183)
chr4 (118-183)||(22738503-22738568)
chr4 (80-154)||(9795490-9795564)
chr4 (80-113)||(8378491-8378524)
[»] scaffold0369 (1 HSPs)
scaffold0369 (12-185)||(3954-4129)
[»] scaffold0420 (1 HSPs)
scaffold0420 (6-182)||(13169-13342)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-212)||(23600-23800)
[»] scaffold0022 (1 HSPs)
scaffold0022 (12-183)||(5061-5234)
[»] scaffold0092 (1 HSPs)
scaffold0092 (38-185)||(10624-10772)
[»] scaffold0213 (1 HSPs)
scaffold0213 (29-183)||(29396-29551)
[»] scaffold0026 (2 HSPs)
scaffold0026 (12-183)||(64372-64541)
scaffold0026 (80-162)||(108001-108084)
[»] scaffold0191 (1 HSPs)
scaffold0191 (12-185)||(7306-7480)
[»] scaffold0383 (1 HSPs)
scaffold0383 (2-183)||(2626-2810)
[»] scaffold1711 (1 HSPs)
scaffold1711 (12-183)||(1153-1322)
[»] scaffold0116 (1 HSPs)
scaffold0116 (12-183)||(269-438)
[»] scaffold0761 (1 HSPs)
scaffold0761 (12-162)||(1424-1576)
[»] scaffold0529 (1 HSPs)
scaffold0529 (2-183)||(3196-3379)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-111)||(130880-130990)
[»] scaffold1500 (1 HSPs)
scaffold1500 (12-185)||(1363-1538)
[»] scaffold0003 (1 HSPs)
scaffold0003 (80-212)||(7414-7547)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-111)||(17131-17241)
[»] scaffold0215 (2 HSPs)
scaffold0215 (80-179)||(9266-9363)
scaffold0215 (80-179)||(16164-16261)
[»] scaffold0516 (1 HSPs)
scaffold0516 (80-183)||(12045-12149)
[»] scaffold0012 (1 HSPs)
scaffold0012 (12-183)||(34007-34180)
[»] scaffold0467 (1 HSPs)
scaffold0467 (8-183)||(10184-10361)
[»] scaffold0017 (1 HSPs)
scaffold0017 (80-182)||(54109-54212)
[»] scaffold0013 (1 HSPs)
scaffold0013 (12-104)||(154282-154373)
[»] scaffold0175 (1 HSPs)
scaffold0175 (2-111)||(803-914)
[»] scaffold0066 (2 HSPs)
scaffold0066 (80-185)||(45262-45369)
scaffold0066 (80-177)||(54656-54755)
[»] scaffold0032 (1 HSPs)
scaffold0032 (80-154)||(13268-13342)
[»] scaffold0892 (1 HSPs)
scaffold0892 (118-182)||(3648-3712)
[»] scaffold0413 (1 HSPs)
scaffold0413 (12-111)||(5922-6022)
[»] scaffold0075 (1 HSPs)
scaffold0075 (80-153)||(34374-34450)
[»] scaffold0132 (2 HSPs)
scaffold0132 (80-153)||(13779-13855)
scaffold0132 (79-111)||(42677-42709)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 18059597 - 18059780
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18059597 gttgaagggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 18059696  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  18059697 atcataatcatgtataatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttg 18059780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17005055 - 17004872
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  17005055 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 17004956  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  17004955 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 17004872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 19962338 - 19962521
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  19962338 gttgaagggaaagcttggggattcaatttgggcgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 19962437  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  19962438 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttgatggacaattgttgttaaattcgtgctcttg 19962521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 38054930 - 38055109
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  38054930 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 38055029  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 179  Q
    |||||||||||||  ||| ||||||| |||||||||||||||||||||||||| |||||||||  ||| |||||||||||    
T  38055030 atcataatcatgtacaatctttgcatcttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgct 38055109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 17148985 - 17148799
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaag-ggggttagttat 99  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||| || ||||||| ||||||||||||| ||||||||||||    
T  17148985 gttgaagggaaagcttgaggaatcaagtggggtgacataggagctgaattgaagcaagggttggggataatcaacttcaaaggtaaggggggttagttat 17148886  T
Q  100 tatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||   |  |||||||||||||||||    
T  17148885 tatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 17148799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 22035827 - 22035652
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| ||||||||||    
T  22035827 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttctcatgtt 22035728  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  22035727 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 22035652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Original strand, 7640810 - 7640985
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  7640810 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 7640909  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  7640910 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 7640985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 22228226 - 22228042
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttat 99  Q
    |||||||||| | ||||| ||||||||| |||| | || | |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  22228226 ttgaagggaataacttgaagaatcaattggggtaagcttaagagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttat 22228127  T
Q  100 tatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  22228126 tatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttg 22228042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 22232882 - 22232739
Alignment:
Q  41 gagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgta 139  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  22232882 gagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgta 22232783  T
Q  140 tgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||| ||  |||||||||||||||    
T  22232782 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttg 22232739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 5072237 - 5072406
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| |||||||||||||||||||| | |||||  ||||| ||||||||||||||||||||||||||||||| ||||||    
T  5072237 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaaagattagggttaatcttcttcaaaggtaagggggttagttattatcacaatcat 5072335  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  5072336 gt-aatttttgcatttactcaagttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 5072406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 46523768 - 46523621
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttg 137  Q
    |||||| | |||| ||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  46523768 taggagataaattaaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgttccattttgcattttctcatgttg 46523669  T
Q  138 tatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||||||||||||||||||||||||  ||  |||||||||||||||||    
T  46523668 tatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 46523621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 45051757 - 45051673
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatg 166  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45051757 aaggtaagggggttagtctttatcataatcatgtg--attttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatg 45051673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 2116589 - 2116492
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 179  Q
    ||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||||    
T  2116589 aaggtaaaggggttagtgattatcataatcatgt--aattttgcattttctcatgttgtataaaaatgggttgatgaacaattcatgctagattcgtgct 2116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 15861258 - 15861358
Alignment:
Q  12 agcttgaggaatcaatttgggtgac-ctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| || | |  |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||  ||||||||||||    
T  15861258 agcttgaggaatcaattgggataagtctaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagtctttatcataatca 15861357  T
Q  111 t 111  Q
    |    
T  15861358 t 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 18601071 - 18601136
Alignment:
Q  118 ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  18601071 ttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcatgctcttg 18601136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 18598845 - 18598914
Alignment:
Q  32 gtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattat 102  Q
    ||||| ||||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||    
T  18598845 gtgacttaggagctgaattgaagcaagagttgggt-taatcttcttctaaggtaagggggttagttattat 18598914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 2437873 - 2437689
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2437873 gttgaagggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 2437774  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||| ||  |||||||||||||||||    
T  2437773 atcataatcatgtacaattttgcattttctcatgttgtatgaaaatgggataatgaacaattcttgctaaattcgtgctcttgtt 2437689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7823145 - 7822962
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  7823145 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 7823046  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  7823045 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 7822962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7830456 - 7830273
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  7830456 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 7830357  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  7830356 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 7830273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 27176850 - 27176667
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  27176850 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 27176751  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  27176750 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 27176667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 27101476 - 27101659
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  27101476 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 27101575  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  27101576 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 27101659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 27108824 - 27109007
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  27108824 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 27108923  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  27108924 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 27109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 38783568 - 38783751
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  38783568 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 38783667  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  38783668 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 38783751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 13910862 - 13911044
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| | |||    
T  13910862 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttattgatt 13910959  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  13910960 atcataatcatgtgtaattttgcatattctcatgttgtatgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgtt 13911044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 10989814 - 10989643
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||| |  |||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||    
T  10989814 agcttgaggaatcaagtgaggtgacataggagcttaattgaagcaagggttagggataatcaacttcaaaggtatgggggttagtgattatcataatcat 10989715  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  10989714 gtataattttgcatattctcatgttgtatgaaaatgggttgatgaacaaatcatgctaaattcgtgctcttg 10989643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16478801 - 16478979
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||| |||| |||||||||||||||| | ||||||||||||||||||| |||||| ||||||| | ||||||| |||||||||||||||||||||| |||    
T  16478801 gttggaggggaagcttgaggaatcaagt-gggtgacctaggagctgaagtgaagctagggttaaggataatcaacttcaaaggtaagggggttagtgatt 16478899  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  16478900 atcataatcattt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgttagattcgtgctctt 16478979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 15950641 - 15950813
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||| ||| ||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  15950641 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttgggttaatcttcttcaaaggtaagggggttagttattatcataatcat 15950740  T
Q  112 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  15950741 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 15950813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 13573079 - 13572910
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  13573079 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 13572981  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13572980 gta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 13572910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 18979872 - 18980043
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  18979872 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 18979970  T
Q  112 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  18979971 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 18980043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 15927973 - 15927800
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  15927973 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15927875  T
Q  112 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||  || ||||||||||||||||||||||||||||||| ||||||| |||||  ||  |||||||||||||||||    
T  15927874 gtacaatttttgcattttctcatgttgtatgaaaatggattgatgatcaattgttgctaaattcgtgctcttgtt 15927800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 15759963 - 15760136
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| |   ||||| ||||| |||||||||||||||||||| ||||||||||    
T  15759963 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatca 15760062  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  15760063 tgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattattgctaaattcgtgctcttg 15760136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 10000288 - 10000421
Alignment:
Q  80 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||  | |||||||||| | |  |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  10000288 aaggtaagggggtttgtcttcatcataatcaatttcaaattttgcatcttctcatgttgtataaaaatgggttgatgaacaatttatgtcaaattcgtgc 10000387  T
Q  179 tcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||    
T  10000388 tcttgttatgttgttgtttcttatacatgaattg 10000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 16418835 - 16418702
Alignment:
Q  80 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||| | |||||||||| | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16418835 aaggtaagggggtttgttttcatcataatcaatttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 16418736  T
Q  179 tcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||| |||| |||||||||||||||    
T  16418735 tcttgttatgttgctgttgcttatacatgaattg 16418702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 13758750 - 13758602
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  13758750 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 13758651  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  13758650 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 13758602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 14250748 - 14250922
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| ||| | | | ||| ||||| |||||||||||||||||||| ||| ||||||    
T  14250748 agcttgaggaatcaattggggtaagattaggagctgaattgaagcaagagtttg-agttatcttcttctaaggtaagggggttagttatcatcgtaatca 14250846  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  | |||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  14250847 tgttcattttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgtt 14250922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 15862257 - 15862174
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaatt 162  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15862257 aaggtaagggggttagttattatcataatcatgtataatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 15862174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 18253761 - 18253844
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaatt 162  Q
    |||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  18253761 aaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 18253844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 15516719 - 15516793
Alignment:
Q  37 ctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    |||||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||||  |||||||||||||    
T  15516719 ctaggagctgaattgaagcaagagttagggttaatcatcttcaaatgtaagggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 48622584 - 48622687
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||| | ||||||||||  |  || ||||||||||||||||||| || |||||||||||||||||||||| |||  ||||||||||    
T  48622584 aaggtaagggggtttgttttcatcataatcaattcaaatttttgcattttctcatgttttacgaaaatgggttgatgaacaattgatgctaaattcgtgc 48622683  T
Q  179 tctt 182  Q
    ||||    
T  48622684 tctt 48622687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 20953 - 21136
Alignment:
Q  2 ttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatta 101  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20953 ttgaagggaaagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagggttaggattaatcatcttcaaaggtaagggggttagttatta 21052  T
Q  102 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  21053 tcataatcatgtacaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgtt 21136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 13899 - 14060
Alignment:
Q  2 ttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatta 101  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13899 ttgaagggaaagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagggttaggattaatcatcttcaaaggtaagggggttagttatta 13998  T
Q  102 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattc 163  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13999 tcataatcatgtacaattttgcattttctcatgttgtatgaaaatgggttgatgcacaattc 14060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22251405 - 22251588
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22251405 gttgaatggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtatgggggttagttatt 22251504  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  22251505 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttg 22251588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 22225577 - 22225759
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22225577 gttgaatggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtatgggggttagttatt 22225676  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  22225677 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctctt 22225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16376212 - 16376395
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  16376212 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 16376311  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  16376312 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 16376395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16383536 - 16383719
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  16383536 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 16383635  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  16383636 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 16383719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 10489116 - 10488933
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  10489116 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 10489017  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  10489016 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 10488933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 16555978 - 16556158
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  16555978 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 16556077  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctc 180  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||    
T  16556078 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctc 16556158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 16632534 - 16632714
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  16632534 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 16632633  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctc 180  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||    
T  16632634 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctc 16632714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 19299654 - 19299471
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  19299654 gttgaagggaaagcttggggattcaatttgggcgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 19299555  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  19299554 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttgatggacaattgttgttaaattcgtgctcttg 19299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 27653821 - 27654001
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||| |||    
T  27653821 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtgagggggttagtgatt 27653918  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  |||||||||||||||    
T  27653919 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatggattgatgaacaaatcatgctaaattcgtgctcttg 27654001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 29869627 - 29869827
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca- 110  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  | ||| ||||| |||||||||||||||||||||||||||||||     
T  29869627 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttgatcttcttctaaggtaagggggttagttattatcataatcaa 29869725  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaat 210  Q
    | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29869726 tttaaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacatgaat 29869825  T
Q  211 tg 212  Q
    ||    
T  29869826 tg 29869827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 37 - 193
Target Start/End: Complemental strand, 25175945 - 25175787
Alignment:
Q  37 ctaggagctgaattgaagcaaggg-ttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcatttt-ctcatg 134  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||    
T  25175945 ctaggagctgaattgaagcaaggggttagagataatcaacttcaaaggtaagggggttagtgattaccataatcatgtataattttgcatttttctcatg 25175846  T
Q  135 ttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgtt 193  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||| | |||||||    
T  25175845 ttgtatgaaaatggattgatgaacaattcatgctaaattcgtgctcttgctgtgttgtt 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 16232297 - 16232126
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  16232297 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 16232199  T
Q  112 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  16232198 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 16232126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 19610425 - 19610252
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  19610425 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 19610326  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || ||||||||||||| |||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  19610325 tgtacaatttttgcattttctgatgttgtatgaaaatgggttgatgaacaattattgctaaattcgtgctcttg 19610252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 1556412 - 1556239
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| |   ||||| ||||| |||||||||||||||||||| ||||||||||    
T  1556412 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatca 1556313  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  1556312 tgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 1556239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 18086690 - 18086847
Alignment:
Q  29 tgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattt 127  Q
    |||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||  ||||||||||  |||||| ||||||    
T  18086690 tgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattagtataatcatgtacaatttttgcattt 18086789  T
Q  128 tctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  18086790 tctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 18086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 16825678 - 16825770
Alignment:
Q  91 gttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16825678 gttagtgattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 16825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 23978149 - 23978001
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||    
T  23978149 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggcgttagttattatcataatcatgtacaatttttgcattttctcatgtt 23978050  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  23978049 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 23978001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14625968 - 14626076
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  14625968 gttgaagggaa-gcttgaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 14626065  T
Q  101 atcataatcat 111  Q
    |||| ||||||    
T  14626066 atcacaatcat 14626076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 1650022 - 1650122
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 179  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  1650022 aaggtaagggggttagtctttatcataatcatgt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgct 1650119  T
Q  180 ctt 182  Q
    |||    
T  1650120 ctt 1650122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 13620712 - 13620818
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||||||  |  ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||    
T  13620712 aaggtaagggggttagtcttcttcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgc 13620811  T
Q  179 tcttgtt 185  Q
    |||||||    
T  13620812 tcttgtt 13620818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 4991470 - 4991396
Alignment:
Q  38 taggagctgaattgaagcaagggtt-aggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4991470 taggagctgaattgaagcaagagtttaggaataatcatcttcaaaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 16814837 - 16814930
Alignment:
Q  2 ttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagt 96  Q
    |||||||||| |||| || |||||| | |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||    
T  16814837 ttgaagggaa-gctttagcaatcaagtggggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagagggttagt 16814930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 1657593 - 1657738
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || ||||||||||||||| |||| ||| ||  ||||| ||||| |||||||||||||||||  | ||||||||||    
T  1657593 agcttgaggaatcaattggggtaagcttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataatca 1657692  T
Q  111 tgtgtaatt-ttgcattttctca--tgttgtatgaaaatgggttga 153  Q
    |||  | || ||||| |||||||  ||||||||||| |||||||||    
T  1657693 tgttcatttattgcaatttctcatttgttgtatgaatatgggttga 1657738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 15862889 - 15862744
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || ||||| |||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||  | ||||||||||    
T  15862889 agcttgaggaatcaattggggtaagcttaggaggtgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataatca 15862790  T
Q  111 tgtgtaatt-ttgcattttctca--tgttgtatgaaaatgggttga 153  Q
    |||  | || ||||| |||||||  ||||||||||| |||||||||    
T  15862789 tgttcatttattgcaatttctcatttgttgtatgaatatgggttga 15862744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 29666208 - 29666109
Alignment:
Q  84 taagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctct 181  Q
    |||| ||||||||  | |||||||||||||  |||| ||||| |||||||| |||||||||||||||| ||||| | ||||  ||| |||||||||||||    
T  29666208 taagtgggttagtcttcatcataatcatgttcaattattgcaatttctcattgttgtatgaaaatggggtgatggataattgttgttaaattcgtgctct 29666109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21932220 - 21932403
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  21932220 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 21932319  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  21932320 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 21932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21938390 - 21938573
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  21938390 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 21938489  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  21938490 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 21938573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 18777830 - 18778010
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||| |||    
T  18777830 gttgaagggaa-gcttgaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataattaacttcaaaggtaagggggttagtgatt 18777927  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18777928 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgttaaattcgtgctcttg 18778010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 35582453 - 35582270
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  35582453 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 35582354  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  35582353 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 35582270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 36989609 - 36989790
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  36989609 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 36989708  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctct 181  Q
    |||||||||||||  ||| |||||| ||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||    
T  36989709 atcataatcatgtacaatctttgcaatttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctct 36989790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22882923 - 22883106
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  22882923 gttgaagggaaagcttgggaaatcaatttgggtgacctaggagctgaattgaagcaagggttagggataatcaacttcaaagataagggggttagttatt 22883022  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| ||||| |||||||||    
T  22883023 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaatttgtgctcttg 22883106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 19500312 - 19500133
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||||||||||||| | ||||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||    
T  19500312 gttgaagggaa-gcttgaggaatcaagt-gggtgac-taggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgatt 19500216  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  19500215 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacacttcatgctaaattcgtgctcttg 19500133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21073433 - 21073613
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||||||||||    
T  21073433 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 21073530  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  21073531 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttaatgaacaattcatgctaaattcgtgctcttg 21073613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22366318 - 22366499
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| || |||||| | |||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||    
T  22366318 gttgaagggaa-gctttagcaatcaagtggggtgacctaggagttgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgatt 22366416  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  22366417 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgagcaattcatgctaaattcgtgctcttg 22366499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 10777809 - 10777992
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| |||    
T  10777809 gttgaaggggaagcttgaggaatcaagtggggtgacctaggagctgaattgaagcaagggttaaggataatcatcttcaaaggtaaggggggtagtgatt 10777908  T
Q  101 atcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  10777909 atcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 10777992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 12788 - 12608
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||  ||| ||| | ||||||| ||||||||||||||||||||||||||    
T  12788 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagttaggattaaggataatcaacttcaaaggtaagggggttagttatt 12691  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  12690 atcataatcatgtgtaattttgtattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 12608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 4199823 - 4200005
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||  |||    
T  4199823 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagggatt 4199920  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||    
T  4199921 atcataatcatgtgtaattttgcatattctcatgttgtatgaaaatgagttgatgaataattcatgctaaattcgtgctcttgtt 4200005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 37 - 183
Target Start/End: Complemental strand, 25427009 - 25426862
Alignment:
Q  37 ctaggagctgaattgaagcaaggg-ttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgt 135  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25427009 ctaggagctgaattgaagcaaggggttagagataatcaacttcaaaggtaagggggttagtgattatcataatcatgtgtaattttgcattttctcatgt 25426910  T
Q  136 tgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  25426909 tgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 25426862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 29188123 - 29188301
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||    
T  29188123 gttgaagggaa-gctttaggaatcaagtggggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgatt 29188221  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    || |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||    
T  29188222 attataatca--tgtaattttgcattttctcatgttgtatgaaaatgggtcgatgaacaattcatgctagattcgtgctctt 29188301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 43443261 - 43443413
Alignment:
Q  29 tgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcatttt 128  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||| ||    
T  43443261 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgattatcataatcatgtgtaa--ttgcatatt 43443358  T
Q  129 ctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  43443359 ctcatgttatatgaaaatggattgatgaacaattcatgttaaattcgtgctcttg 43443413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 11211902 - 11212087
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaa--tttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagtta 98  Q
    |||||||||| ||||||| |||||||  || |||| | |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  11211902 ttgaagggaatagcttgaagaatcaaaattggggtaagctaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagtta 11212001  T
Q  99 ttatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  11212002 ttatcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttg 11212087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 17471427 - 17471610
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||| ||| |   |||||||||||||||||||||||||||||||||    
T  17471427 ttgaagggaatagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttgagttaatcatcttcaaaggtaagggggttagttatt 17471526  T
Q  101 atcataatcatgt-gtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  17471527 atcataatcatgtacaaattttgtattttctcatgttgtatgaaaatgggttgatgaacaattgttgataaattcgtgctcttg 17471610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 23328937 - 23328762
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  23328937 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 23328838  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  23328837 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 23328762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 24616541 - 24616366
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  24616541 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 24616442  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  24616441 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 24616366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 24712917 - 24712742
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  24712917 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 24712818  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  24712817 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 24712742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 24745935 - 24745760
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  24745935 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 24745836  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  24745835 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 24745760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 27010244 - 27010075
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  27010244 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 27010146  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27010145 gta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 27010075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 35790947 - 35791120
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  35790947 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 35791046  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  35791047 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 35791120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 7425729 - 7425558
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  7425729 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 7425631  T
Q  112 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  7425630 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattattgctaaattcgtgctcttg 7425558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 23514966 - 23514795
Alignment:
Q  14 cttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatg 112  Q
    ||||||||||||||| |||| | || |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||| ||||||||||||    
T  23514966 cttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcatg 23514867  T
Q  113 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  23514866 ttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 23514795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 183
Target Start/End: Original strand, 1219396 - 1219542
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  1219396 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatcataatcatgtacaatttttgcattttctcatgtt 1219495  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||  ||  |||||||||||||||    
T  1219496 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 1219542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11343118 - 11343008
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||  ||||| |||||||||||||||||||||||| ||    
T  11343118 gttgaagggaaagcttgaggaatcaagtggggtgacctaggagctgaattgaagcagaggttagggttaatcttcttcaaaggtaagggggttagttttt 11343019  T
Q  101 atcataatcat 111  Q
    |||||||||||    
T  11343018 atcataatcat 11343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 16106077 - 16105967
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| |||  |  ||||| ||||| |||||||||||||||||  ||    
T  16106077 gttgaagggaaagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagtcttt 16105978  T
Q  101 atcataatcat 111  Q
    |||||||||||    
T  16105977 atcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 31726 - 31543
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  31726 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 31627  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  31626 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 31543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 39935 - 39880
Alignment:
Q  128 tctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  39935 tctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 39880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 39520 - 39337
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  39520 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 39421  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  39420 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 39337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 43411 - 43231
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||| |||| |||||||||||||||| | |||||| |||||||||||| |||||| ||| ||| | ||||||| |||||||||||||||||||||||| |    
T  43411 gttggaggggaagcttgaggaatcaagt-gggtgatctaggagctgaagtgaagctaggattaaggataatcaacttcaaaggtaagggggttagttact 43313  T
Q  101 atcataatcatgtgtaattttgcatttt-ctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||| || |||||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43312 atcacaaacatgt--aattttgcatttttctcatgttgtatgaaaatgggttgatgagcaattcatgtcaaattcgtgctcttg 43231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 4e-71; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 271199 - 271382
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  271199 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 271298  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  271299 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 271382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 644721 - 644538
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  644721 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 644622  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  644621 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 830456 - 830273
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  830456 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 830357  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  830356 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 830273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 15318998 - 15319181
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  15318998 gttgaaggaaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 15319097  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  15319098 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 15319181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 15499367 - 15499550
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  15499367 gttgaaggaaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 15499466  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  15499467 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 15499550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22088633 - 22088816
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||     
T  22088633 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatc 22088732  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||| |||| |||||||||  ||| |||||||||||||||    
T  22088733 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgtgttggtgaacaattgttgttaaattcgtgctcttg 22088816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 30121137 - 30120956
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||    
T  30121137 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagtaagggttagagataatcatcttcaaaggtaagggggttagtgatt 30121040  T
Q  101 atcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||| ||||| ||  |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  30121039 atcataatcatgtgtaatttttgtataatctcatgttgtatgaaaatgagttgatgaacaattcatgctaaattcgtgctcttg 30120956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 6774098 - 6774275
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||| |||| |||||||||||||||| | ||||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||    
T  6774098 gttggaggggaagcttgaggaatcaagt-gggtgac-taggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgatt 6774195  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  6774196 atcataatca--tgtaattttgcattttctcatgttatatgaaaatgggttgatgaacaattcatgctagattcgtgctctt 6774275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 24549394 - 24549216
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||| |||| |||||||||||||||| | ||||||||||||||||||| |||||| ||||||| | ||||||| |||| ||||||||||||||||| |||    
T  24549394 gttggaggggaagcttgaggaatcaagt-gggtgacctaggagctgaagtgaagctagggttaaggataatcaacttctaaggtaagggggttagtgatt 24549296  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  24549295 atcataatcatgt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgctctt 24549216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 21851813 - 21851983
Alignment:
Q  11 aagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    |||||||||||||||| | ||||||||||| ||||||| || ||| ||| ||| | ||||||| |||||||||||||||||||||||||||||| |||||    
T  21851813 aagcttgaggaatcaagt-gggtgacctagaagctgaagtggagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcacaatca 21851911  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21851912 tgta-atttttgcatttgctcatgttgtatgaaattgggttgatgaacaattcatgtcaaattcgtgctcttg 21851983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 22006107 - 22006280
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| |   ||||| |||||||||||||||||||||||||||||||||||||    
T  22006107 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgagttaatcttcttcaaaggtaagggggttagttattatcataatca 22006206  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  22006207 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 22006280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 21844420 - 21844590
Alignment:
Q  11 aagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    |||||||||||||||| | ||||||||||| ||||||| || ||| ||| ||| | ||||||| |||||| ||||||||||||||||||||||| |||||    
T  21844420 aagcttgaggaatcaagt-gggtgacctagaagctgaagtggagctaggattaaggataatcaacttcaacggtaagggggttagttattatcacaatca 21844518  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21844519 tgta-atttttgcatttgctcatgttgtatgaaattgggttgatgaacaattcatgtcaaattcgtgctcttg 21844590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 13720777 - 13720952
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  13720777 agcttgaggaatcaattggggtaagattaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 13720876  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  13720877 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 13720952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 13662114 - 13662287
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  13662114 agcttgaggaatcaattggggtaagattaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 13662213  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || ||||||||||||||||||||||||||||||||||||| |||||||  ||  |||||||||||||||    
T  13662214 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgataaacaattgttgctaaattcgtgctcttg 13662287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 38 - 162
Target Start/End: Complemental strand, 16195611 - 16195486
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 136  Q
    |||||| |||||||||||||| ||| ||  ||||||||||| ||||||||||||||| ||||||||||||||||||  || |||||||||||||||||||    
T  16195611 taggagttgaattgaagcaagagtttgggttaatcatcttctaaggtaagggggttaattattatcataatcatgtacaatttttgcattttctcatgtt 16195512  T
Q  137 gtatgaaaatgggttgatgaacaatt 162  Q
    ||||||||||||||||||||||||||    
T  16195511 gtatgaaaatgggttgatgaacaatt 16195486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 16872927 - 16873075
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| |   ||||| ||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  16872927 taggagctaaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 16873026  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  16873027 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 16873075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 16674258 - 16674409
Alignment:
Q  29 tgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcatttt 128  Q
    |||||||| || |||||||||||||||||| |||  |  ||||| ||||| ||||||||||||||||||||||||| ||||||||  | ||||||||||     
T  16674258 tgggtgacttatgagctgaattgaagcaagagttgagt-taatcttcttctaaggtaagggggttagttattatcacaatcatgta-atttttgcatttg 16674355  T
Q  129 ctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  16674356 ctcatgttgtatgaaaatgggttgttgaacaattcatgctaaattcgtgctctt 16674409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 17345985 - 17345842
Alignment:
Q  14 cttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatg 112  Q
    ||||||||||||||| |||| | || |||||||||||||||||||| ||| ||  ||||| |||||  ||||||||||||||||  | ||||||||||||    
T  17345985 cttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttcttaggtaagggggttagtcttcatcataatcatg 17345886  T
Q  113 tgtaatt-ttgcattttctca--tgttgtatgaaaatgggttga 153  Q
    |  | || ||||| |||||||  ||||||||||| |||||||||    
T  17345885 ttcatttattgcaatttctcatttgttgtatgaatatgggttga 17345842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1467578 - 1467761
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  1467578 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 1467677  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  1467678 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 1467761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12264630 - 12264814
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttggg-tgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttat 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  12264630 gttgaagggaaagcttgaggaatcaatttggggtgacctaggagctgaattgaagcaaaggttgggattaatcatcttcaaaggtaagggggttagttat 12264729  T
Q  100 tatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  12264730 tatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 12264814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 49232853 - 49232670
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  49232853 gttgaagggaaagcttggggaatcaatttgggtgacctatgagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 49232754  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  49232753 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 49232670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 12812258 - 12812075
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||    
T  12812258 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaactttaaaggtaagggggttagttatt 12812159  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  12812158 atcataatcatgtacaatctttgcattttctcatattgtatgaaaatgggttgatggacaattgttgttaaattcgtgctcttg 12812075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 22275626 - 22275443
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||  |||| |  |||||||||||||||||||||||||||||||||    
T  22275626 ttgaagggaatagcttgaggaatcaattggggtaagctaggagctgaattgaagcaaaagttaaggttaatcatcttcaaaggtaagggggttagttatt 22275527  T
Q  101 atcataatcatgt-gtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  22275526 atcataatcatgtacaaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 22275443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 16821553 - 16821373
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||| | ||||| ||||||||| |||| | |||||||||||||||||||||| ||| |   ||||| |||||||||||||||||||||||||||    
T  16821553 ttgaagggaataacttgaagaatcaattggggtaagctaggagctgaattgaagcaagagtttgtgttaatcttcttcaaaggtaagggggttagttatt 16821454  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16821453 atcacaatcatgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaatttatgtcaaatccgtgctcttg 16821373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 41270478 - 41270309
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| |||||||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||||||||| ||||||    
T  41270478 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaaggattagggttaatcttcttcaaaggtaagggggttagttattatcacaatcat 41270380  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  41270379 gt-aatttttgcatctactcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 41270309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 55316622 - 55316453
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| |||||||||||||||||||||| |||||  ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  55316622 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaaggattagggttaatcttcttcaaaggtaaaggggttagttattatcacaatcat 55316524  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  55316523 gt-aatttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 55316453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 188
Target Start/End: Original strand, 15468189 - 15468367
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || ||||||||||||||||||||  |||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  15468189 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataatca 15468288  T
Q  111 tgt-gtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatg 188  Q
    |||   |||||||||||||||||||||||||||||||||||||| ||||||||  ||  ||||||||||||||| ||||    
T  15468289 tgtacaaattttgcattttctcatgttgtatgaaaatgggttgaggaacaattgttgctaaattcgtgctcttgctatg 15468367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 18911400 - 18911225
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  18911400 agcttgaggaatcaattggggtaagattaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 18911301  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  18911300 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 18911225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 18896893 - 18897066
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  18896893 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttccaaggtaagggggttagttattatcataatca 18896992  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || ||||| |||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  18896993 tgtacaagttttgtattttctcatgttgtatgaaaatgggttgatgaacaattgttgataaattcgtgctcttg 18897066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 25059146 - 25058973
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||   |||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  25059146 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaaaaattagggttaatcttcttcaaaggtaagggggttagttattatcataatca 25059047  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||   || |||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  25059046 tgcacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 25058973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 5228719 - 5228570
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || ||||||||||||||| |||| ||| ||  ||||| ||||| |||||||||||||||||||| ||||||||||    
T  5228719 agcttgaggaatcaattggggtaagcttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatca 5228620  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaaca 159  Q
    |||  || ||||||||||||||||||  ||||||||||||||||||||||    
T  5228619 tgttcaatttttgcattttctcatgtgttatgaaaatgggttgatgaaca 5228570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 15615168 - 15615084
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatg 166  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15615168 aaggtaagggggttagtctttatcataatcatgt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatg 15615084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 12902008 - 12902112
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||  ||  ||||||||||    
T  12902008 aaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaataatttttgctaaattcgtgc 12902107  T
Q  179 tcttg 183  Q
    |||||    
T  12902108 tcttg 12902112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 15938395 - 15938478
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaatt 162  Q
    |||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  15938395 aaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 15938478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 54651837 - 54651691
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||  ||| ||  |||||||| || |||||||||||||| ||  | |||||||||||||  |||||| ||| |||||||||||    
T  54651837 taggagcttaattgaagcaaaagtttgggttaatcatcatctaaggtaagggggtttgtcttcatcataatcatgttcaatttttgcaatttctcatgtt 54651738  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||| ||||  ||  |||||||||||||||    
T  54651737 gtatgaaaatgggttgatgaataattgttgctaaattcgtgctcttg 54651691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 15936553 - 15936636
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaatt 162  Q
    |||||| ||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  15936553 aaggtatgggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 15936636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 14842419 - 14842519
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||| ||||||| |||| | || |||||||||||||||||||| ||||||  ||||| ||||| |||||||||||||||||  ||||||||||||    
T  14842419 agcttgagggatcaattggggtaagcttaggagctgaattgaagcaagagttagggttaatcttcttctaaggtaagggggttagtctttatcataatca 14842518  T
Q  111 t 111  Q
    |    
T  14842519 t 14842519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 23492796 - 23492696
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    |||||||||||||||||||||| | || |||||||||||||||||||| ||| ||  ||||| || || |||||||||||||||||  ||||||||||||    
T  23492796 agcttgaggaatcaatttgggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtctttatcataatca 23492697  T
Q  111 t 111  Q
    |    
T  23492696 t 23492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 8268609 - 8268683
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatg 112  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||||    
T  8268609 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 8268683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 8275709 - 8275783
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatg 112  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||||    
T  8275709 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 8275783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 44229323 - 44229217
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatg-ttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||| | ||||||||||  |  ||||||    ||||||||| |||||||||||||||||||||||||||| |||| |||| |||||    
T  44229323 aaggtaagggggtttgttttcatcataatcaattcaaattttttcatttctcatggttgtatgaaaatgggttgatgaacaattgatgttaaatccgtgc 44229224  T
Q  179 tcttgtt 185  Q
    |||||||    
T  44229223 tcttgtt 44229217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 11231177 - 11231360
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  11231177 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 11231276  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  11231277 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 11231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22513024 - 22513207
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  22513024 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 22513123  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  22513124 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 22513207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 24685620 - 24685803
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  24685620 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 24685719  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  24685720 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 24685803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 28775646 - 28775829
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  28775646 gttgaagggaaagcttggggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 28775745  T
Q  101 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  28775746 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttg 28775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 19886499 - 19886679
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||| | ||| ||| | ||||||| ||||||||||||||||||||||||||    
T  19886499 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaaactaggattaaggataatcaacttcaaaggtaagggggttagttatt 19886596  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  19886597 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 19886679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 23774516 - 23774341
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| ||  || |||| ||| || |||||||    
T  23774516 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaagttcaaattttacatcttttcatgtt 23774417  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  23774416 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 23774341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 16936000 - 16935827
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||| ||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  16936000 agcttgaggaatcaattggggtaagcttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 16935901  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||    
T  16935900 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcatgctcttg 16935827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 17006660 - 17006487
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||| ||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  17006660 agcttgaggaatcaattggggtaagcttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 17006561  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||||||    
T  17006560 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcatgctcttg 17006487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 8944226 - 8944078
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  8944226 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 8944127  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  8944126 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 8944078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 42177818 - 42177993
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | ||| |||||||||||||||| |||  |  ||||| ||||| |||||||||||||||||||||||||||||||    
T  42177818 agcttgaggaatcaattggggtaagattaggggctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagttattatcataatca 42177917  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  42177918 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 42177993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 12728772 - 12728626
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  12728772 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 12728673  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||  ||  |||||||||||||||    
T  12728672 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 12728626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 185
Target Start/End: Original strand, 3798482 - 3798627
Alignment:
Q  41 gagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgta 139  Q
    ||||| |||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  3798482 gagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtataatttttgcattttctcatgttgta 3798581  T
Q  140 tgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||||||||||||||||||||||   |  |||||||||||||||||    
T  3798582 tgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 3798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 5888548 - 5888681
Alignment:
Q  80 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||| | |||||||||| | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5888548 aaggtaagggggtttgttttcatcataatcaatttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 5888647  T
Q  179 tcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||| |||| |||||||||||||||    
T  5888648 tcttgttatgttgctgttgcttatacatgaattg 5888681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 34824855 - 34824709
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  34824855 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatcataatcatgtacaatttttgcattttctcatgtt 34824756  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||||||||||||||||  ||  |||||||||||||||    
T  34824755 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 34824709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 12635744 - 12635892
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||  || |||||||||| ||||||||    
T  12635744 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcatttcctcatgtt 12635843  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||||||||| |||||||||||||||  ||  |||||||||||||||||    
T  12635844 gtatgaaaataggttgatgaacaattgttgctaaattcgtgctcttgtt 12635892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 12641518 - 12641666
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| || || ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  12641518 taggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 12641617  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  12641618 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 12641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 23777963 - 23778067
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    ||||||| |||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  23777963 aaggtaaaggggttagttatcatcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 23778062  T
Q  179 tcttg 183  Q
    |||||    
T  23778063 tcttg 23778067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24826538 - 24826646
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||||| ||     
T  24826538 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaaaggggttagtcatc 24826635  T
Q  101 atcataatcat 111  Q
    |||||||||||    
T  24826636 atcataatcat 24826646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 25213446 - 25213372
Alignment:
Q  38 taggagctgaattgaagcaagggtt-aggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  25213446 taggagctgaattgaagcaagagtttaggaataatcatcttcaaaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21142187 - 21142127
Alignment:
Q  126 tttctcatg-ttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  21142187 tttctcatggttgtatgaaaatgggttgatgaacaattgatgttaaattcgtgctcttgtt 21142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 131; Significance: 4e-68; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 169748 - 169930
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||  |||||||||||||||| | ||||||| || ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||    
T  169748 gttgaaggcgaagcttgaggaatcaagtggggtgacataagagctgaattgaagcaagggttagtgataatcatcttcaaaagtaagggggttagtgatt 169847  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  169848 atcataatcatgtataattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 169930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 36501 - 36326
Alignment:
Q  8 ggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataa 107  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||    
T  36501 ggaaagctttaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagggataatcaacttcaaaggtaagggggttaatgattatcataa 36403  T
Q  108 tcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgt 184  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  36402 tcatgtgtaattttgcatattctcatgttgtatgaaactgggttgatgaacaattcatgctaaattcgtgctcttgt 36326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 153856 - 154029
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||| |   ||||| ||||| |||||||||||||||||||||||||||||||    
T  153856 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataatca 153955  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  153956 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 154029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 29 - 212
Target Start/End: Complemental strand, 6986 - 6802
Alignment:
Q  29 tgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattt 127  Q
    |||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| |    
T  6986 tgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatct 6887  T
Q  128 tctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6886 tctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacatgaattg 6802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 31513 - 31694
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||||||||||| |||    
T  31513 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaatgtaagggggttagtgatt 31610  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgt 184  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  31611 atcataatcatgtgtaattttgcatattctcatgttgtatgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgt 31694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 9e-63; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 22351915 - 22352115
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca- 110  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||||||||     
T  22351915 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaa 22352013  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaat 210  Q
    | |  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  22352014 tttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcatgctcttgttatgttgctgtttcttatacatgaat 22352113  T
Q  211 tg 212  Q
    ||    
T  22352114 tg 22352115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 10644632 - 10644453
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||| |||| |||||||||||||||| | |||||| |||||||||||| |||||  ||| ||| | ||||||| ||||||||||||||||||||||||||    
T  10644632 gttggaggggaagcttgaggaatcaagt-gggtgatctaggagctgaagtgaagttaggattaaggataatcaacttcaaaggtaagggggttagttatt 10644534  T
Q  101 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10644533 atcacaatcatgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 10644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 38 - 212
Target Start/End: Complemental strand, 26339399 - 26339224
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  26339399 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 26339300  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  26339299 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgctgtttcttatacttgaattg 26339224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 18169375 - 18169204
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||  |||||  ||||| ||||||| ||||||||||||||||||||||||||||||    
T  18169375 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagaattagggttaatcttcttcaa-ggtaagggggttagttattatcataatcat 18169277  T
Q  112 gtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  18169276 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 18169204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 7131914 - 7132089
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| ||| ||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  7131914 agcttgaggaatcaattggggtaagattaggagctgaattgaagcaagagtttggattaatcttcttctaaggtaagggggttagttattatcataatca 7132013  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  || ||||||||||||||||||| |||||||||||||||||||||||||  ||  |||||||||||||||||    
T  7132014 tgtacaatttttgcattttctcatgttatatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 7132089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 47358057 - 47357888
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||| ||||||||||| |||| | || |||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||| |||||    
T  47358057 agcttaaggaatcaattggggtaagcttaggagctgaattgaagcaagagttgggt-taatcttcttctaaggtaagggggttagttattatcacaatca 47357959  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  47357958 tgt--aattttgcatttcctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 47357888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 182
Target Start/End: Original strand, 17145506 - 17145678
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||| ||| ||| |   ||||| ||||| |||||||||||||||||||||||||||||||    
T  17145506 agcttgaggaatcaattggggtaagcttaggagctgaattgaagtaagagtttgtgttaatcttcttctaaggtaagggggttagttattatcataatca 17145605  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    |||  |||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  17145606 tgttcaatttttgcattttctcatgttgtatgaaaatgagttgatgaacaattgatgttaaattcgtgctctt 17145678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 15287096 - 15287267
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  15287096 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15287194  T
Q  112 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  || |||||||||||||||||||||||||||||||| ||||||||||||   |  |||||||||||||||    
T  15287195 gtacaatttttgcattttctcatgttgtatgaaaatgggatgatgaacaattatagctaaattcgtgctcttg 15287267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 15294221 - 15294376
Alignment:
Q  29 tgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattt 127  Q
    |||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||  || ||||||||||    
T  15294221 tgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattt 15294320  T
Q  128 tctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||| ||||||||||||   |  |||||||||||||||    
T  15294321 tctcatgttgtatgaaaatgggatgatgaacaattatagctaaattcgtgctcttg 15294376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 20001103 - 20000955
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 136  Q
    |||||||| |||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  20001103 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 20001004  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||   |  |||||||||||||||||    
T  20001003 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgtt 20000955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 18248568 - 18248452
Alignment:
Q  68 taatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaattttg-cattttctcatgttgtatgaaaatgggttgatgaacaattcatg 166  Q
    |||||||| || |||||||||||||||||||||||||||||| |||  ||||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  18248568 taatcatcatctaaggtaagggggttagttattatcataatcttgtacaatttttacattttctcatgttgtatgaaaatgggttgatgaacaattgatg 18248469  T
Q  167 tcaaattcgtgctcttg 183  Q
    | |||||||||||||||    
T  18248468 ttaaattcgtgctcttg 18248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 19020824 - 19020720
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||||||||  |||||||||||||  |||||| ||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  19020824 aaggtaagggggttagttaccatcataatcatgttcaatttttgcattttgtcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 19020725  T
Q  179 tcttg 183  Q
    |||||    
T  19020724 tcttg 19020720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 8378480 - 8378385
Alignment:
Q  89 gggttagttattatcataatcatgtgtaattttg-cattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||    
T  8378480 gggttagttattatcataatcatgtacaatttttacattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttg 8378385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 14996545 - 14996444
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| ||| ||  ||||| ||||  |||||||||||||||||||||||||||||||    
T  14996545 agcttgaggaatcaattggggtaagtttaggagctgaattgaagcaagagtttgggttaatcttcttttaaggtaagggggttagttattatcataatca 14996446  T
Q  111 tg 112  Q
    ||    
T  14996445 tg 14996444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 14952183 - 14952085
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||  |||||||||||||    
T  14952183 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtctttatcataatcat 14952085  T

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Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 22738568 - 22738503
Alignment:
Q  118 ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||| |||||    
T  22738568 ttttgcattttctcatgttgtatgaaaatgggctgaggaacaattgatgttaaattcgtgttcttg 22738503  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 9795564 - 9795490
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgat 154  Q
    |||||||||||||||||||| |||||||||||||  || |||| ||||||||||||||||||| ||||||||||||    
T  9795564 aaggtaagggggttagttatcatcataatcatgttcaattttttcattttctcatgttgtatg-aaatgggttgat 9795490  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 8378524 - 8378491
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgt 113  Q
    ||||||||||| ||||||||||||||||||||||    
T  8378524 aaggtaaggggattagttattatcataatcatgt 8378491  T

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Target: scaffold0369 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 4129 - 3954
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||| ||||||  ||||||||||| ||||||||||| |||||||||||||||||||    
T  4129 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagttagggttaatcatcttctaaggtaaggggtttagttattatcataatca 4030  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  4029 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgtt 3954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 13169 - 13342
Alignment:
Q  6 agggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcat 105  Q
    |||| |||||||||||||||| | ||||||||||||| ||||| |||||| ||||||| | ||||||| |||||||||||||||||||||| ||||||||    
T  13169 aggggaagcttgaggaatcaagt-gggtgacctaggaactgaagtgaagctagggttaaggataatcaacttcaaaggtaagggggttagtgattatcat 13267  T
Q  106 aatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  13268 aatca--tgtaatttttcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgctctt 13342  T

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Target: scaffold0155 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 23600 - 23800
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca- 110  Q
    ||||| ||||||||| | ||||||| ||||| ||||||||||||||| ||| ||  ||||| ||||| ||| ||||||||||||||||||||||| |||     
T  23600 agctttaggaatcaagt-gggtgacttaggaactgaattgaagcaagagtttgggttaatcttcttctaagttaagggggttagttattatcatattcaa 23698  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgttatgttgttgtttcttatacatgaat 210  Q
    | |  |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  23699 tttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaactcatgtcaaattcgtgctctggttatgttgttgtttcttatacatggat 23798  T
Q  211 tg 212  Q
    ||    
T  23799 tg 23800  T

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Target: scaffold0022 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 5061 - 5234
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||| ||||||||| |||| | || |||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  5061 agcttgaagaatcaattggggtaagcttaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggagttagttattatcataatca 5160  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  5161 tgtacaatttttgcattttctcacgttgtatgaaaatgggttgatgaacaattcttgttaaattcgtgctcttg 5234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 10624 - 10772
Alignment:
Q  38 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 136  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  10624 taggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 10723  T
Q  137 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    ||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  10724 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 29551 - 29396
Alignment:
Q  29 tgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 127  Q
    |||||||||||||||||||| |||||| ||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  29551 tgggtgacctaggagctgaagtgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 29452  T
Q  128 tctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  29451 tctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttg 29396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 104; Significance: 5e-52; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 64372 - 64541
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  64372 agcttaaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 64470  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  64471 gta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 64541  T

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Target: scaffold0026; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 108084 - 108001
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaatt 162  Q
    |||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  108084 aaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 108001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 7306 - 7480
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||  |||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  7306 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcat 7405  T
Q  112 g-tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    | |  | |||||||||||||||||||||||||||||||||||||||||||||  |   |||||||||||||||||    
T  7406 gttccatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattattactaaattcgtgctcttgtt 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 2810 - 2626
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||| ||||||||||||||||| |||| | |||||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||    
T  2810 ttgaagggaatagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttatt 2711  T
Q  101 atcataatcatgtgtaa--ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||  ||   ||||||||||||||    
T  2710 atcataatcatgtacaaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctcaattcgtgctcttg 2626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 1153 - 1322
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcat 111  Q
    ||||| ||||||||| |||| |||| |||||||||||||||||||||| |||||  ||||| |||||||||||| |||||||||||||||||| ||||||    
T  1153 agctttaggaatcaagttgg-tgacttaggagctgaattgaagcaaggattagggttaatcttcttcaaaggtaggggggttagttattatcacaatcat 1251  T
Q  112 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||  | |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1252 gt-aatttttgcatttactcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 1322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 183
Target Start/End: Complemental strand, 438 - 269
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || ||||||||||||||||| || ||| ||| ||||| ||||| ||||||||||||||||||||||||| |||||    
T  438 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcgagagtttggattaatcttcttctaaggtaagggggttagttattatcaaaatca 339  T
Q  111 tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  338 tgt--aattttgcattg-ctcatgttatatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 1424 - 1576
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| | || |||||||||||||||||||||||| ||  ||||| ||||| |||||||||||||||||||||||||||||||    
T  1424 agcttgaggaatcaattggggtaagcttaggagctgaattgaagcaagggtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 1523  T
Q  111 tgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 162  Q
    |||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  1524 tgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 3379 - 3196
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttat 99  Q
    |||||||||| ||||||| ||||||||| |||| | || |||||||||||||||||||| |||  |  ||||| ||||| ||||||||||||||| ||||    
T  3379 ttgaagggaatagcttgaagaatcaattggggtaagcttaggagctgaattgaagcaagagtttcggttaatcttcttctaaggtaagggggttaattat 3280  T
Q  100 tatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  3279 tatcataattatgtacaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttg 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 130990 - 130880
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||    
T  130990 gttgaagggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggcataatcatcttcaaaggtaagggggttagtcttt 130891  T
Q  101 atcataatcat 111  Q
    |||||||||||    
T  130890 atcataatcat 130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 1363 - 1538
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||||| |||  |  ||||| ||||| |||||||||||||||||||||||||||||||    
T  1363 agcttgaggaatcaattggggtaagattaggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagttattatcataatca 1462  T
Q  111 tgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgtt 185  Q
    |||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  1463 tgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgtt 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 7547 - 7414
Alignment:
Q  80 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||| | |||||||||| | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7547 aaggtaagggggtttgttttcatcataatcaatttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 7448  T
Q  179 tcttgttatgttgttgtttcttatacatgaattg 212  Q
    ||||||||||||| |||| |||||||||||||||    
T  7447 tcttgttatgttgctgttgcttatacatgaattg 7414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17131 - 17241
Alignment:
Q  1 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 100  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  |     
T  17131 gttgaaaggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggaataataatcttctaaggtaagggggttagtcttc 17230  T
Q  101 atcataatcat 111  Q
    |||||||||||    
T  17231 atcataatcat 17241  T

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Target: scaffold0215 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 9266 - 9363
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 179  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9266 aaggtaagggggttagttattatcacaatcatgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 9363  T

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Target: scaffold0215; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 16164 - 16261
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 179  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16164 aaggtaagggggttagttattatcacaatcatgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 16261  T

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Target: scaffold0516 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 12045 - 12149
Alignment:
Q  80 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatg-ttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtg 177  Q
    ||||||||||||||||||||||||||||||| | |  |||||| ||||| |||||| |||||||||||||||||||||||||||| |||| |||||||||    
T  12045 aaggtaagggggttagttattatcataatcaatttcaaatttttcattt-ctcatggttgtatgaaaatgggttgatgaacaattgatgttaaattcgtg 12143  T
Q  178 ctcttg 183  Q
    ||||||    
T  12144 ctcttg 12149  T

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Target: scaffold0012 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 34007 - 34180
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatca 110  Q
    ||||||||||||||||| | || | || ||||||| |||||||||||| ||| ||  ||||| || || |||||||||||||||||  | ||||||||||    
T  34007 agcttgaggaatcaattggcgtaagcttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtcttcatcataatca 34106  T
Q  111 tgtgtaa-ttttgcattttctca-tgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||  || ||||||||||||||| ||||||||| ||||||||||||||| ||||  ||  |||||||||||||||    
T  34107 tgttcaatttttgcattttctcattgttgtatg-aaatgggttgatgaaaaattgttgctaaattcgtgctcttg 34180  T

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Target: scaffold0467 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 10184 - 10361
Alignment:
Q  8 ggaaagcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcata 106  Q
    ||||||||||||||||||||| |||| | || | ||||| || ||||||    ||| ||  |||||||| || |||||||||||||| ||  |  |||||    
T  10184 ggaaagcttgaggaatcaattggggtaagcttatgagctaaagtgaagcctaagttggggttaatcatcatctaaggtaagggggtttgtcttcttcata 10283  T
Q  107 atcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 183  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||  ||  |||||||||||||||    
T  10284 atcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaataattgttgctaaattcgtgctcttg 10361  T

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Target: scaffold0017 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 54212 - 54109
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 178  Q
    |||||||||||||| ||| | ||||||||||  |  || ||||||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||    
T  54212 aaggtaagggggtttgttttcatcataatcaattcaaatttttgcattttctcatgttttatgaaaatgggttgatgaacaattgatgctaaattcgtgc 54113  T
Q  179 tctt 182  Q
    ||||    
T  54112 tctt 54109  T

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Target: scaffold0013 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 154282 - 154373
Alignment:
Q  12 agcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatca 104  Q
    ||||| ||||||||| | ||||||| ||||||||||||||||||||| ||| ||  ||||| ||||| |||||||||||||||||||||||||    
T  154282 agctttaggaatcaagt-gggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 154373  T

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Target: scaffold0175 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 803 - 914
Alignment:
Q  2 ttgaagggaa-agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttat 99  Q
    |||||||||| ||||||||||||||||| |||| | || ||||||||||||||| |||| ||| ||  ||||| ||||| |||||||||||||||||  |    
T  803 ttgaagggaatagcttgaggaatcaattggggtaagcttaggagctgaattgaatcaagagttggggttaatcttcttctaaggtaagggggttagtctt 902  T
Q  100 tatcataatcat 111  Q
    ||||||||||||    
T  903 tatcataatcat 914  T

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Target: scaffold0066 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 45369 - 45262
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtg 177  Q
    |||||||||||||||||  | |||||||||||||  |||| ||||| |||||||| |||||||||||||||||||||||| ||||  ||| |||||||||    
T  45369 aaggtaagggggttagtcttcatcataatcatgttcaattattgcaatttctcattgttgtatgaaaatgggttgatgaataattgttgttaaattcgtg 45270  T
Q  178 ctcttgtt 185  Q
    | ||||||    
T  45269 cccttgtt 45262  T

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Target: scaffold0066; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 177
Target Start/End: Complemental strand, 54755 - 54656
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtg 177  Q
    ||||||||| |||||||  | |||||||||||||  |||| ||||| |||||||| |||||||||||||||||||||||| ||||  ||| |||||||||    
T  54755 aaggtaaggtggttagtcttcatcataatcatgttcaattattgcaatttctcattgttgtatgaaaatgggttgatgaataattgttgttaaattcgtg 54656  T

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Target: scaffold0032 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 13268 - 13342
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgat 154  Q
    |||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||| ||||||||||||    
T  13268 aaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgttgtatg-aaatgggttgat 13342  T

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Target: scaffold0892 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 3712 - 3648
Alignment:
Q  118 ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctctt 182  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||  ||||| ||||||||    
T  3712 ttttgcattttctcatgttttatgaaaatgggttgatgaacaattgatgctaaattagtgctctt 3648  T

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Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 5922 - 6022
Alignment:
Q  12 agcttgaggaatcaatttgggtgacct-aggagctgaattgaagcaagggttaggaataatcatct-tcaaaggtaagggggttagttattatcataatc 109  Q
    ||||||||||||||||| | || | || |||||||||||||||||||| ||||||| ||||| ||| || |||||||||||||||||  |||||||||||    
T  5922 agcttgaggaatcaattagagtaagcttaggagctgaattgaagcaagagttaggattaatc-tctatctaaggtaagggggttagtctttatcataatc 6020  T
Q  110 at 111  Q
    ||    
T  6021 at 6022  T

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Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 34374 - 34450
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctca--tgttgtatgaaaatgggttga 153  Q
    |||||||| |||||||||||||||||||||||||  | || ||||| |||||||  ||||||||||| |||||||||    
T  34374 aaggtaagagggttagttattatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttga 34450  T

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Target: scaffold0132 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 13855 - 13779
Alignment:
Q  80 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctca--tgttgtatgaaaatgggttga 153  Q
    |||||||||||||||||  | ||||||||||||| || || ||||| |||||||  ||||||||||| |||||||||    
T  13855 aaggtaagggggttagtcttcatcataatcatgtttatttattgcaatttctcatttgttgtatgaatatgggttga 13779  T

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Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 42709 - 42677
Alignment:
Q  79 aaaggtaagggggttagttattatcataatcat 111  Q
    ||||||||||||||||||| |||||||||||||    
T  42709 aaaggtaagggggttagtttttatcataatcat 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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