View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15816_high_18 (Length: 309)

Name: NF15816_high_18
Description: NF15816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15816_high_18
NF15816_high_18
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-278)||(17977-18254)
[»] chr5 (17 HSPs)
chr5 (1-278)||(38144507-38144782)
chr5 (1-248)||(19512195-19512441)
chr5 (1-248)||(28370055-28370300)
chr5 (9-253)||(22750957-22751201)
chr5 (10-253)||(23528450-23528690)
chr5 (184-248)||(18407944-18408008)
chr5 (193-272)||(22438723-22438803)
chr5 (184-248)||(23111200-23111264)
chr5 (193-278)||(42961566-42961651)
chr5 (194-249)||(19236900-19236955)
chr5 (233-278)||(1856452-1856497)
chr5 (233-278)||(21674422-21674467)
chr5 (196-249)||(22461158-22461211)
chr5 (196-249)||(22467782-22467835)
chr5 (194-249)||(20781744-20781799)
chr5 (220-249)||(17021913-17021942)
chr5 (195-259)||(34830086-34830149)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-246)||(14398-14643)
[»] chr7 (31 HSPs)
chr7 (1-252)||(14422793-14423043)
chr7 (9-253)||(18873176-18873420)
chr7 (9-248)||(15167991-15168230)
chr7 (1-248)||(16009386-16009631)
chr7 (9-244)||(10895795-10896030)
chr7 (1-259)||(13743518-13743774)
chr7 (9-259)||(12709833-12710083)
chr7 (9-259)||(13122904-13123154)
chr7 (4-259)||(12590633-12590885)
chr7 (134-259)||(13007374-13007497)
chr7 (51-246)||(16677152-16677348)
chr7 (51-246)||(17651388-17651584)
chr7 (193-298)||(21230910-21231015)
chr7 (193-248)||(11382871-11382926)
chr7 (193-248)||(11389348-11389403)
chr7 (193-272)||(20311026-20311107)
chr7 (185-248)||(13679485-13679548)
chr7 (193-277)||(148619-148703)
chr7 (194-249)||(2971254-2971309)
chr7 (194-249)||(20906461-20906516)
chr7 (194-248)||(11311059-11311113)
chr7 (213-254)||(831628-831669)
chr7 (213-254)||(1196808-1196849)
chr7 (213-254)||(34958578-34958619)
chr7 (192-248)||(46625961-46626017)
chr7 (194-249)||(29181109-29181164)
chr7 (10-86)||(13007252-13007329)
chr7 (234-291)||(14945066-14945123)
chr7 (234-291)||(15372659-15372716)
chr7 (196-249)||(31155396-31155449)
chr7 (197-249)||(16091078-16091130)
[»] chr3 (37 HSPs)
chr3 (1-246)||(24192763-24193009)
chr3 (1-249)||(23370505-23370752)
chr3 (1-248)||(9534137-9534382)
chr3 (9-248)||(14762758-14762997)
chr3 (37-246)||(20247791-20247999)
chr3 (9-246)||(38310802-38311039)
chr3 (67-272)||(16801444-16801647)
chr3 (165-259)||(41455087-41455178)
chr3 (13-246)||(55499104-55499337)
chr3 (1-249)||(24933828-24934073)
chr3 (187-248)||(18929239-18929300)
chr3 (184-248)||(17240513-17240577)
chr3 (194-249)||(13302240-13302295)
chr3 (194-249)||(13323787-13323842)
chr3 (1-86)||(10414693-10414779)
chr3 (1-86)||(10421363-10421449)
chr3 (194-249)||(12033444-12033499)
chr3 (194-249)||(13312896-13312951)
chr3 (194-249)||(17131732-17131787)
chr3 (194-249)||(51301589-51301644)
chr3 (1-86)||(10389604-10389690)
chr3 (233-278)||(24122228-24122273)
chr3 (194-249)||(14865846-14865901)
chr3 (214-249)||(23392819-23392854)
chr3 (192-246)||(16801027-16801081)
chr3 (234-272)||(18127695-18127733)
chr3 (234-272)||(18135465-18135503)
chr3 (196-249)||(10389443-10389496)
chr3 (196-249)||(10414532-10414585)
chr3 (196-249)||(10421202-10421255)
chr3 (233-278)||(13967769-13967814)
chr3 (233-278)||(13973244-13973289)
chr3 (213-249)||(2247649-2247685)
chr3 (198-254)||(10833303-10833359)
chr3 (234-262)||(14543478-14543506)
chr3 (234-262)||(16829104-16829132)
chr3 (234-262)||(16837626-16837654)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-249)||(111495-111741)
scaffold0026 (9-259)||(11840-12090)
[»] chr1 (17 HSPs)
chr1 (1-248)||(20437024-20437270)
chr1 (134-272)||(41111977-41112112)
chr1 (184-248)||(32651563-32651627)
chr1 (184-248)||(18712790-18712854)
chr1 (193-248)||(19663517-19663572)
chr1 (192-248)||(20805320-20805376)
chr1 (193-248)||(11158093-11158148)
chr1 (192-246)||(10811785-10811839)
chr1 (194-249)||(20851132-20851187)
chr1 (194-249)||(20857759-20857814)
chr1 (194-249)||(21706276-21706331)
chr1 (194-249)||(21710818-21710873)
chr1 (218-248)||(24476350-24476380)
chr1 (218-248)||(25091418-25091448)
chr1 (214-247)||(18271338-18271371)
chr1 (214-247)||(18275992-18276025)
chr1 (10-86)||(41111855-41111932)
[»] chr6 (35 HSPs)
chr6 (1-259)||(10986170-10986427)
chr6 (1-248)||(23839007-23839253)
chr6 (10-294)||(18800255-18800538)
chr6 (1-248)||(4477666-4477912)
chr6 (9-272)||(29614124-29614386)
chr6 (37-248)||(23057783-23057993)
chr6 (114-259)||(930085-930229)
chr6 (134-272)||(12168305-12168440)
chr6 (10-272)||(19785847-19786104)
chr6 (134-272)||(19878398-19878533)
chr6 (10-246)||(21565214-21565449)
chr6 (134-259)||(19287214-19287337)
chr6 (134-272)||(19884174-19884309)
chr6 (164-249)||(34639986-34640069)
chr6 (184-249)||(34646660-34646725)
chr6 (193-298)||(24512794-24512899)
chr6 (184-249)||(25469704-25469767)
chr6 (196-248)||(9187498-9187550)
chr6 (192-248)||(25348486-25348542)
chr6 (192-246)||(25598643-25598697)
chr6 (192-248)||(25397172-25397228)
chr6 (184-249)||(31252413-31252478)
chr6 (192-248)||(19471335-19471391)
chr6 (192-246)||(2286769-2286823)
chr6 (214-248)||(18659450-18659484)
chr6 (214-248)||(24441673-24441707)
chr6 (196-249)||(11288668-11288721)
chr6 (10-86)||(12168183-12168260)
chr6 (196-249)||(15458492-15458545)
chr6 (196-249)||(15465087-15465140)
chr6 (10-86)||(19287092-19287169)
chr6 (10-86)||(19878276-19878353)
chr6 (10-86)||(19884052-19884129)
chr6 (221-249)||(28288509-28288537)
chr6 (214-254)||(29415551-29415591)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-298)||(11150-11446)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-249)||(10195-10442)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-249)||(1525-1772)
[»] chr8 (16 HSPs)
chr8 (1-249)||(44477432-44477678)
chr8 (1-249)||(44492590-44492836)
chr8 (9-246)||(8727735-8727972)
chr8 (9-259)||(23866430-23866680)
chr8 (1-278)||(27940822-27941100)
chr8 (134-259)||(17054533-17054656)
chr8 (184-248)||(23482053-23482117)
chr8 (192-248)||(18614271-18614327)
chr8 (193-298)||(14056514-14056619)
chr8 (193-298)||(25111976-25112081)
chr8 (192-248)||(39364919-39364975)
chr8 (194-248)||(29643386-29643440)
chr8 (194-249)||(24320670-24320725)
chr8 (192-248)||(21931696-21931752)
chr8 (221-278)||(21325736-21325794)
chr8 (233-278)||(30765880-30765925)
[»] chr2 (19 HSPs)
chr2 (1-248)||(19661454-19661699)
chr2 (1-248)||(6483527-6483772)
chr2 (1-248)||(6486994-6487239)
chr2 (51-272)||(26583687-26583904)
chr2 (1-246)||(23878817-23879060)
chr2 (10-246)||(23089057-23089292)
chr2 (10-248)||(23101463-23101700)
chr2 (134-249)||(5706023-5706137)
chr2 (184-248)||(23265133-23265197)
chr2 (184-248)||(23280201-23280265)
chr2 (187-248)||(21908353-21908414)
chr2 (193-278)||(6260142-6260227)
chr2 (192-248)||(24661576-24661632)
chr2 (194-249)||(10577-10632)
chr2 (194-249)||(25180929-25180984)
chr2 (149-258)||(26885139-26885246)
chr2 (196-259)||(23168288-23168351)
chr2 (196-259)||(23579545-23579608)
chr2 (241-278)||(19665044-19665081)
[»] scaffold0029 (1 HSPs)
scaffold0029 (35-272)||(111724-111960)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-272)||(101-368)
[»] scaffold1773 (1 HSPs)
scaffold1773 (9-256)||(995-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (9-256)||(49996-50241)
[»] scaffold0924 (1 HSPs)
scaffold0924 (9-259)||(740-990)
[»] chr4 (17 HSPs)
chr4 (9-259)||(8045822-8046071)
chr4 (9-272)||(11847923-11848191)
chr4 (134-249)||(53483646-53483760)
chr4 (193-298)||(15408139-15408244)
chr4 (192-248)||(8834895-8834951)
chr4 (192-248)||(13888641-13888697)
chr4 (194-246)||(14486661-14486713)
chr4 (192-248)||(15245215-15245271)
chr4 (192-243)||(22724691-22724742)
chr4 (213-254)||(15747551-15747592)
chr4 (192-248)||(15308120-15308176)
chr4 (194-249)||(16146830-16146885)
chr4 (194-249)||(27906266-27906321)
chr4 (218-248)||(15069781-15069811)
chr4 (218-248)||(15076381-15076411)
chr4 (234-270)||(1650182-1650219)
chr4 (192-249)||(14912081-14912138)
[»] scaffold0154 (1 HSPs)
scaffold0154 (79-298)||(30743-30962)
[»] scaffold0117 (2 HSPs)
scaffold0117 (35-259)||(1887-2109)
scaffold0117 (35-259)||(8564-8786)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-246)||(3295-3540)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-246)||(3624-3868)
[»] scaffold0796 (2 HSPs)
scaffold0796 (134-254)||(1727-1845)
scaffold0796 (134-254)||(5750-5868)
[»] scaffold0456 (4 HSPs)
scaffold0456 (182-253)||(920-991)
scaffold0456 (182-253)||(8065-8136)
scaffold0456 (3-102)||(800-899)
scaffold0456 (3-102)||(7945-8044)
[»] scaffold0107 (1 HSPs)
scaffold0107 (193-298)||(40482-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (136-255)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (193-298)||(135473-135578)
[»] scaffold0235 (1 HSPs)
scaffold0235 (195-298)||(22543-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (193-272)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (184-248)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (184-248)||(116887-116951)
scaffold0004 (214-247)||(60441-60474)
[»] scaffold0461 (1 HSPs)
scaffold0461 (184-248)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (184-248)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (184-248)||(101928-101992)
[»] scaffold0634 (1 HSPs)
scaffold0634 (9-87)||(3478-3557)
[»] scaffold0124 (2 HSPs)
scaffold0124 (193-248)||(34276-34331)
scaffold0124 (192-249)||(35438-35495)
[»] scaffold0815 (1 HSPs)
scaffold0815 (197-259)||(1453-1515)
[»] scaffold0138 (1 HSPs)
scaffold0138 (192-248)||(12296-12352)
[»] scaffold2054 (1 HSPs)
scaffold2054 (196-259)||(717-780)
[»] scaffold0317 (1 HSPs)
scaffold0317 (185-248)||(1378-1441)
[»] scaffold0139 (2 HSPs)
scaffold0139 (193-248)||(14997-15052)
scaffold0139 (234-272)||(26892-26930)
[»] scaffold0096 (1 HSPs)
scaffold0096 (192-252)||(39503-39563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (194-258)||(493019-493082)
[»] scaffold0790 (1 HSPs)
scaffold0790 (220-259)||(5480-5519)
[»] scaffold0348 (2 HSPs)
scaffold0348 (194-249)||(9336-9391)
scaffold0348 (234-298)||(14604-14668)
[»] scaffold0127 (1 HSPs)
scaffold0127 (194-249)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (194-249)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (194-248)||(1913-1967)
[»] scaffold0609 (1 HSPs)
scaffold0609 (184-249)||(5857-5922)
[»] scaffold0261 (1 HSPs)
scaffold0261 (194-259)||(23559-23624)
[»] scaffold0335 (1 HSPs)
scaffold0335 (192-248)||(2628-2684)
[»] scaffold0053 (1 HSPs)
scaffold0053 (194-249)||(79490-79545)
[»] scaffold0067 (3 HSPs)
scaffold0067 (234-272)||(46708-46746)
scaffold0067 (234-262)||(55733-55761)
scaffold0067 (234-262)||(62119-62147)
[»] scaffold0481 (1 HSPs)
scaffold0481 (202-247)||(676-721)
[»] scaffold0249 (2 HSPs)
scaffold0249 (241-278)||(2219-2256)
scaffold0249 (196-249)||(13894-13947)
[»] scaffold0600 (1 HSPs)
scaffold0600 (192-248)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (199-248)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (194-246)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (192-248)||(121902-121958)
scaffold0031 (192-248)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (196-248)||(69749-69801)
[»] scaffold0005 (1 HSPs)
scaffold0005 (234-262)||(266108-266136)


Alignment Details
Target: scaffold0090 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 17977 - 18254
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17977 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 18076  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatca-tcaaccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||||||||||||||| |||||||  |||||||||||||||||    
T  18077 aaacagaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagcta-agcaattaggtcaatttt 18175  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  18176 caaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcg 18254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 38144782 - 38144507
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| |||||||    
T  38144782 atacaaatcttcatcaattcatccaatcaatcgtaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattac 38144683  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    ||  ||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||  |  ||||||||||||||||||    
T  38144682 aat-agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa--ttatgcaattaggtcaatttt 38144586  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38144585 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcg 38144507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 19512195 - 19512441
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || ||||    
T  19512195 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttac 19512294  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    ||  ||||||||||||| || ||||  ||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  19512295 aat-agaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaatttt 19512392  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512393 cagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 28370300 - 28370055
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || ||||    
T  28370300 atacaaatcttcatcaattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttac 28370201  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  28370200 aa-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 28370104  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370103 cagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 22750957 - 22751201
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  22750957 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 22751055  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  22751056 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 22751153  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagtttt 253  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751154 ttatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 23528450 - 23528690
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcatg-atcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaa 108  Q
    |||||||||| || ||||  ||||||| ||||||||||||||| || ||||||||||||| | ||||| |||| ||||  |||| | ||| |||  | ||    
T  23528450 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-aa 23528548  T
Q  109 ttaacatgaccattac-catttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 206  Q
     |||||| | | |||| ||||  || |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||    
T  23528549 ctaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaat 23528643  T
Q  207 tatagattatgattattgagagatagtctcacccttaccttagtttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23528644 tatagattatgattattgagagatagtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaagaattacacagca 272  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 42961566 - 42961651
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcg 42961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 1856497 - 1856452
Alignment:
Q  233 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcg 1856452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 21674467 - 21674422
Alignment:
Q  233 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcg 21674422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  220 tattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 34830086 - 34830149
Alignment:
Q  195 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||| ||||  |||||||| ||||| || ||||||||||||||  ||||||||    
T  34830086 attttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgcagaa 34830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14643 - 14398
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||| |||||||||||||||||||||||||||  | ||||||||| || ||||||||||||||| ||||| |||||||||||||| | ||||||||||||    
T  14643 ataccaatattcatcaatttatccaatcaatcatattttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattac 14544  T
Q  101 aaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattt 198  Q
    || |||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  14543 aa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattt 14446  T
Q  199 tcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14445 tcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 14422793 - 14423043
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||| |||| |||||||||||||||  |||| |||||||    
T  14422793 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattac 14422892  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  14422893 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaatttt 14422990  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttagttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422991 cagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 18873176 - 18873420
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  18873176 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 18873274  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  18873275 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 18873372  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagtttt 253  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873373 ttatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 15167991 - 15168230
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  15167991 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 15168089  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  15168090 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 15168187  T
Q  206 ttatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  15168188 ttatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 16009386 - 16009631
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  ||||||||||| || ||||||||| |||||  |||| |||||||||||||||  |||| |||||||    
T  16009386 atacaaatcttcatcaattcatccaatcaatcataatttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattac 16009485  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaaccct-aaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| ||| ||||| |||||||| |||||||| |   ||||||||||||||||||    
T  16009486 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaacca--tgcaattaggtcaatttt 16009582  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009583 cagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 10896030 - 10895795
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  10896030 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 10895932  T
Q  108 attaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 206  Q
    |||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||| ||||    
T  10895931 attaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttcaaaaat 10895833  T
Q  207 tatagattatgattattgagagatagtctcacccttac 244  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10895832 tatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 13743518 - 13743774
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||| ||||||||||||||||||| ||| |  |||||||| ||||| ||||||||||||| ||||||| |||||| |||| |||| ||| || | |||    
T  13743518 atacaattattcatcaatttatccaaccaagcataatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatac 13743617  T
Q  101 aaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattt 198  Q
    ||  | ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13743618 aagaa-aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt 13743714  T
Q  199 tcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
     ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13743715 -caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 12710083 - 12709833
Alignment:
Q  9 attcatcaatttatccaatcaatccaaatttc--aatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacag 106  Q
    ||||||||||| ||||||||| ||  || |||  ||||| || | |||||||||||||||| || ||||||||  |||||| |||| | |||||||| ||    
T  12710083 attcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattacaaatag 12709985  T
Q  107 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 204  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  12709984 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 12709888  T
Q  205 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12709887 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 13123154 - 13122904
Alignment:
Q  9 attcatcaatttatccaatcaatccaaatttc--aatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacag 106  Q
    ||||||||||| ||||||||| ||  || |||  ||||| || | |||||||||||||||| || ||||||||  |||||| |||| | |||||||| ||    
T  13123154 attcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattacaaatag 13123056  T
Q  107 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 204  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  13123055 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 13122959  T
Q  205 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13122958 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 259
Target Start/End: Complemental strand, 12590885 - 12590633
Alignment:
Q  4 caaatattcatcaatttatccaatcaatccaaatttcaatcaattcatg-atcacagcaacaacataggttaagttttcattctggacatcacattacaa 102  Q
    |||||||||||||||  || ||||  ||||||| ||||||||||| ||| || ||||||||||||| | ||||| |||||||||  |||| | ||| |||    
T  12590885 caaatattcatcaataaatacaattcatccaaaattcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaa 12590786  T
Q  103 acagaattaacatgaccattac-catttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 200  Q
      | || |||||| | | |||| ||||  || |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |    
T  12590785 gaa-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-c 12590692  T
Q  201 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12590691 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 13007374 - 13007497
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 13007470  T
Q  233 tctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||    
T  13007471 tctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  51 tgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcc-cgtcagaatcatcatcaa 149  Q
    ||||||||||||||  |||| ||| |  ||||||||| ||||||| |||||| || | ||||||||| ||||||    ||| | ||| ||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaa-catatttaacatgatcattacaccatcctcctcaaaatcatcatcaa 16677250  T
Q  150 -ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
     |||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677251 accctaacccttaattttatcttccaaaaactat-gcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 246
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  51 tgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcc-cgtcagaatcatcatcaa 149  Q
    ||||||||||||||  |||| ||| |  ||||||||| ||||||| |||||| || | ||||||||| ||||||    ||| | ||| ||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaa-catatttaacatgatcattacaccatcctcctcaaaatcatcatcaa 17651486  T
Q  150 -ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
     |||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651487 accctaacccttaattttatcttccaaaaactat-gcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 21231015 - 21230910
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| ||  ||||||||     
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctctt 21230916  T
Q  293 ctctct 298  Q
    ||||||    
T  21230915 ctctct 21230910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaagaattacacagca 272  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||  ||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  185 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 148619 - 148703
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatc 277  Q
    |||||||||||||  ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||  |||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatc 148703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 13007252 - 13007329
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  13007252 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 13007329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 14945123 - 14945066
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctct 291  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||| ||  ||||||||    
T  14945123 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctaggctct 14945066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 15372716 - 15372659
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctct 291  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||| ||  ||||||||    
T  15372716 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctaggctct 15372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  197 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24192763 - 24193009
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgat-cacagcaacaacataggttaagttttcattctggacatcacatta 99  Q
    |||| |||||||||||||||||||||||||||  | ||||||||| || ||||| |||||||||| ||||| |||||||||||||||| |||||||||||    
T  24192763 ataccaatattcatcaatttatccaatcaatcatattttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacatta 24192862  T
Q  100 caaacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatt 197  Q
    ||| |||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||    
T  24192863 caa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaatt 24192960  T
Q  198 ttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192961 ttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 23370752 - 23370505
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| |||||||    
T  23370752 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattac 23370653  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  23370652 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaatttt 23370555  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370554 cagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 9534137 - 9534382
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||  |||||  |||| |||||||||||||||  |||| |||||||    
T  9534137 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattac 9534236  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||  |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  9534237 aa-cagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 9534333  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534334 cagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 14762997 - 14762758
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  14762997 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 14762899  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  14762898 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 14762801  T
Q  206 ttatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  14762800 ttatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 37 - 246
Target Start/End: Complemental strand, 20247999 - 20247791
Alignment:
Q  37 tttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgtc 135  Q
    |||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  | ||||||||||| ||||||| ||||||| ||    
T  20247999 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaa-aattaacatgatcattacccatttcccttc 20247901  T
Q  136 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247900 agaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 20247803  T
Q  235 tcacccttacct 246  Q
    ||||||||||||    
T  20247802 tcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 38311039 - 38310802
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||| ||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  38311039 attcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 38310941  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||| ||||||||    
T  38310940 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatattcagaaa 38310843  T
Q  206 ttatagattatgattattgagagatagtctcacccttacct 246  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  38310842 ttatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 272
Target Start/End: Complemental strand, 16801647 - 16801444
Alignment:
Q  67 ataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattac-catttcccgtcagaatcatcatcaaccctaaccctcaattt 165  Q
    ||||||||||  ||||||||  |||||||||||||  || | ||||||||| |||||| |  ||| | ||| |||||||||||||||||||| |||||||    
T  16801647 ataggttaagaattcattctaaacatcacattacag-catatttaacatgatcattacaccattctcctcaaaatcatcatcaaccctaaccttcaattt 16801549  T
Q  166 attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaatta 265  Q
      | | |||||||||  ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16801548 tatcttcaaaagctaa-gcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggatta 16801451  T
Q  266 cacagca 272  Q
    |||||||    
T  16801450 cacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 41455178 - 41455087
Alignment:
Q  165 tattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455178 tattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 55499337 - 55499104
Alignment:
Q  13 atcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaa 112  Q
    ||||||| |||||||||||   | |||||||||||| ||||||||||||||   |||| ||||| |||||||| | |||||||||||| |||| ||||||    
T  55499337 atcaattcatccaatcaattatattttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattac-aacataattaa 55499239  T
Q  113 catgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattata 210  Q
    ||||| |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |   ||| ||||||||||||| | ||||||| |    
T  55499238 catgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcagttaggtcaattttcccgaaattaca 55499141  T
Q  211 gattat-gattattgagagatagtctcacccttacct 246  Q
     |||||  |||| ||||||||||||||||||||||||    
T  55499140 tattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 24934073 - 24933828
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattctggacatcacatta 99  Q
    ||||||||||||||||||| || ||||  ||| ||| ||||||||||| || |||  |||||||||||| | ||||| |||||||||  |||| | |||     
T  24934073 atacaaatattcatcaattcatacaatacatcaaaaattcaatcaattaatggattgcagcaacaacatggattaagctttcattcttaacattaaatt- 24933975  T
Q  100 caaacagaattaacatgaccattac-catttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaatt 197  Q
    |  | | || |||||| | | |||| ||||  || |||||||||||||| ||||||||   |||  ||||||||||||| ||||| |||||||||||| |    
T  24933974 ccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaattttcatattattttccaaaa-ctatt-caattaggtcaa-t 24933880  T
Q  198 ttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933879 ttcagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  187 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10414779 - 10414693
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    ||||||||||||||||||| || ||||  ||||||| ||||||||||| || |||  |||||||||||| ||||||| |||||||||    
T  10414779 atacaaatattcatcaattcatacaattcatccaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10414693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10421449 - 10421363
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    ||||||||||||||||||| || ||||  ||||||| ||||||||||| || |||  |||||||||||| ||||||| |||||||||    
T  10421449 atacaaatattcatcaattcatacaattcatccaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10421363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10389690 - 10389604
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    ||||||||||||||||||| || ||||  ||| ||| ||||||||||| || |||  |||||||||||| ||||||| |||||||||    
T  10389690 atacaaatattcatcaattcatacaattcatcaaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10389604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 24122273 - 24122228
Alignment:
Q  233 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcg 24122228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  214 tatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 18127733 - 18127695
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagca 272  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18127733 ctcacccttaccttagttttgcagaaaaaatacacagca 18127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 18135503 - 18135465
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagca 272  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18135503 ctcacccttaccttagttttgcagaaaaaatacacagca 18135465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 10389496 - 10389443
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10389496 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 10414585 - 10414532
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10414585 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 10421255 - 10421202
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10421255 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 13967814 - 13967769
Alignment:
Q  233 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||||||||||  || | ||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcg 13967769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 13973289 - 13973244
Alignment:
Q  233 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||||||||||  || | ||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcg 13973244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccttag 249  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 10833359 - 10833303
Alignment:
Q  198 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 254  Q
    ||||||| ||||| | |||||||| |||  | |||||||||||||||||||||||||    
T  10833359 ttcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttg 10833303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 14543506 - 14543478
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaa 262  Q
    |||||||||||||||||||||||||||||    
T  14543506 ctcacccttaccttagttttgcagaagaa 14543478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 16829132 - 16829104
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaa 262  Q
    |||||||||||||||||||||||||||||    
T  16829132 ctcacccttaccttagttttgcagaagaa 16829104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 16837654 - 16837626
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaa 262  Q
    |||||||||||||||||||||||||||||    
T  16837654 ctcacccttaccttagttttgcagaagaa 16837626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 111495 - 111741
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| |||||||    
T  111495 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattac 111594  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  111595 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 111691  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111692 cagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 12090 - 11840
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||||||||||| | |||||||||||||||||| || |||||||||||||||| | || | |||||||  |||    
T  12090 attcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattacaag-aga 11992  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  11991 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaa-ctat-gcaattaggtcaattttcagaaa 11894  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11893 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 20437270 - 20437024
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| |||||||    
T  20437270 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 20437171  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || || ||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  20437170 aa-cataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaatttt 20437073  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437072 cagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 272
Target Start/End: Original strand, 41111977 - 41112112
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 41112073  T
Q  233 tctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  41112074 tctcacccttaccttagttttgcagaa-aattagacagca 41112112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  218 attattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  218 attattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  214 tatgattattgagagatagtctcacccttacctt 247  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  214 tatgattattgagagatagtctcacccttacctt 247  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 41111855 - 41111932
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  41111855 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 41111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 10986427 - 10986170
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| |||||||    
T  10986427 atacaaatcttcatcaattcatccaatcaatcgtaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 10986328  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  10986327 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaatttt 10986230  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
     ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  10986229 tagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 23839007 - 23839253
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| |||||||    
T  23839007 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 23839106  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| | |||||||||||||| |||||||||||||||||| |||||||  |||| |||||||||||||||||    
T  23839107 aa-cagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctcaatttatcttccaaacactat-gcaattaggtcaatttt 23839204  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839205 cagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 10 - 294
Target Start/End: Original strand, 18800255 - 18800538
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 109  Q
    |||||||||| |||||||||||   | ||||||||||||  |||||||| |||||| |||| ||||| ||||||| || |||||||||||||| ||||||    
T  18800255 ttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaa-cagaat 18800353  T
Q  110 taacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatt-tattttccaaaagctattgcaattaggtcaattttcagaaatt 207  Q
    |||||||| ||||||   |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||    
T  18800354 taacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaa-gcaattaggtcaattttcagaaatt 18800451  T
Q  208 atagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcct 294  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||  |||||||||||    
T  18800452 atagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttcctaggctctcct 18800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4477666 - 4477912
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| || ||||| | ||||||||||||  |||||||||||||| ||||||||| |||||| |||| |||||||||||||||  |||| |||||||    
T  4477666 atacaaatctttatcaaatcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattac 4477765  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||| ||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  4477766 aa-cagaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaatttt 4477863  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477864 cagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 272
Target Start/End: Complemental strand, 29614386 - 29614124
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||||||||||| | |||||||||||||||||| || |||||||||||||||  ||||  || |||||  |||    
T  29614386 attcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacatt-caatacaag-aga 29614289  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| | |||  ||| |||| ||||||||||||||||||    
T  29614288 attaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattat-gcaactaggtcaattttcagaaa 29614190  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  29614189 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 29614124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 37 - 248
Target Start/End: Original strand, 23057783 - 23057993
Alignment:
Q  37 tttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgtc 135  Q
    |||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  ||||||||||||| ||||||| ||||||| ||    
T  23057783 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-agaattaacatgatcattacccatttcccttc 23057881  T
Q  136 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  23057882 agaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcaggaattatagattatgattatcgagagatagtc 23057979  T
Q  235 tcacccttacctta 248  Q
    ||||||||||||||    
T  23057980 tcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  114 atgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattataga 212  Q
    |||| |||||||  ||||| |||||| ||||||||| ||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||| ||||||    
T  930229 atgatcattacccattcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaa-ctata-caattaggtcaattttcagaaactataga 930132  T
Q  213 ttatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  930131 ttatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 272
Target Start/End: Original strand, 12168305 - 12168440
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 12168401  T
Q  233 tctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  12168402 tctcacccttaccttagttttgcagaa-aattagacagca 12168440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 272
Target Start/End: Complemental strand, 19786104 - 19785847
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaa 108  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||  |||| | ||| |||    ||    
T  19786104 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaa--gaaa 19786007  T
Q  109 ttaacatgaccattac-catttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 206  Q
     |||||| | | |||| ||||  || |||||||||||||| |||||||||  ||| |||||||||||||| ||||| ||| |||||||| ||||||||||    
T  19786006 ctaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcattttattttccaaaa-ctatt-caactaggtcaa-tttcagaaat 19785912  T
Q  207 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  19785911 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 19785847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 272
Target Start/End: Original strand, 19878398 - 19878533
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19878494  T
Q  233 tctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  19878495 tctcacccttaccttagttttgcagaa-aattagacagca 19878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 246
Target Start/End: Complemental strand, 21565449 - 21565214
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 109  Q
    |||||||||| |||||||||||   | |||||||||||| |||||||||||||||  |||| ||||| |||||||| | || ||||||||| |||| |||    
T  21565449 ttcatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattac-aacataat 21565351  T
Q  110 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 208  Q
    |||||||| |||||||  ||||| | |||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||| |||||||    
T  21565350 taacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaattaggtcaattttccgaaatta 21565253  T
Q  209 tagattat-gattattgagagatagtctcacccttacct 246  Q
     | |||||  |||| ||||||||||||||||||||||||    
T  21565252 aatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 19287214 - 19287337
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19287310  T
Q  233 tctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||    
T  19287311 tctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 272
Target Start/End: Original strand, 19884174 - 19884309
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19884270  T
Q  233 tctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||||||||| ||||||||||||||||| ||||| ||||||    
T  19884271 tctcaccctaaccttagttttgcagaa-aattagacagca 19884309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  164 ttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaa-ctatt-caattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 34646725 - 34646660
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646725 caattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 24512899 - 24512794
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||  ||| ||||||| ||||| ||  ||||||||     
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctctt 24512800  T
Q  293 ctctct 298  Q
    ||||||    
T  24512799 ctctct 24512794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 25469767 - 25469704
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25469767 caattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 31252413 - 31252478
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  214 tatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  214 tatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 11288721 - 11288668
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 12168183 - 12168260
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  12168183 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 12168260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 19287092 - 19287169
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  19287092 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 19287169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 19878276 - 19878353
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  19878276 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 19878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 19884052 - 19884129
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 86  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  19884052 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 19884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 249
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  221 attgagagatagtctcacccttaccttag 249  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  214 tatgattattgagagatagtctcacccttaccttagttttg 254  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 11150 - 11446
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||  |||||||||| |||||||||||   | ||||||||||||  ||||||||||||||  || | ||||| ||||||| || ||||||||||||    
T  11150 atacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattac 11249  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatt-tattttccaaaagctattgcaattaggtcaattt 198  Q
    || |||||||||||||| ||||||   |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||  ||||||||||||||||    
T  11250 aa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaa-gcaattaggtcaattt 11346  T
Q  199 tcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcctctct 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||  |||||||| ||||||    
T  11347 tcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctaggctcttctctct 11446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 10442 - 10195
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| |||||||    
T  10442 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattac 10343  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  10342 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaatttt 10245  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10244 cagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 1772 - 1525
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| |||||||    
T  1772 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattac 1673  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  1672 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaatttt 1575  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1574 cagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44477432 - 44477678
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || ||||    
T  44477432 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttac 44477531  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  44477532 aa-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 44477628  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477629 cagaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44492590 - 44492836
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || ||||    
T  44492590 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttac 44492689  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  44492690 aa-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 44492786  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492787 cagaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 8727972 - 8727735
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| ||||||||| ||||    
T  8727972 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaa-caga 8727874  T
Q  108 attaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 206  Q
    |||||||||| || ||||  | ||| ||||||||||| |||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  8727873 attaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttcagaaat 8727775  T
Q  207 tatagattatgattattgagagatagtctcacccttacct 246  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  8727774 tatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 9 - 259
Target Start/End: Original strand, 23866430 - 23866680
Alignment:
Q  9 attcatcaatttatccaatcaatccaaatttc--aatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacag 106  Q
    ||||||||||| ||||||||| ||  || |||  ||||| || | ||||| |||||||||| || ||||||||  |||||| |||| | |||||||| ||    
T  23866430 attcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacattatattacaaatag 23866528  T
Q  107 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 204  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  23866529 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 23866625  T
Q  205 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23866626 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 27941100 - 27940822
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||| | |||||  |||| |||| ||||||||||| |||| |||||||    
T  27941100 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattac 27941001  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaat--ttattttccaaaagctattgcaattaggtcaatt 197  Q
     |||||||||||||||| || ||||  ||||| |||||||||||||| ||||||||  | ||||  ||||||| ||| | | |||  ||| |   |||||    
T  27941000 -aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatca-aacaatt 27940903  T
Q  198 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    ||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  27940902 ttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcg 27940822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 17054533 - 17054656
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 17054629  T
Q  233 tctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||| |||||||||||    
T  17054630 tctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 14056619 - 14056514
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||||||||  ||| |||| || ||||| ||  ||||||||     
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttcctaggctctt 14056520  T
Q  293 ctctct 298  Q
    ||||||    
T  14056519 ctctct 14056514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 25111976 - 25112081
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||| ||||  ||| |||| || ||||| ||  ||||||||     
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtttctaggctctt 25112075  T
Q  293 ctctct 298  Q
    ||||||    
T  25112076 ctctct 25112081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 21325794 - 21325736
Alignment:
Q  221 attgagagatagtctcacccttaccttagttttgcag-aagaattacacagcacaatcg 278  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  21325794 attgagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcg 21325736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 30765925 - 30765880
Alignment:
Q  233 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||||||||||  || | ||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcg 30765880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 6e-74; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19661699 - 19661454
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||| |||| |||||||||||||||  |||| |||||||    
T  19661699 atacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattac 19661600  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  19661599 aa-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatttt 19661503  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19661502 cagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 6483527 - 6483772
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || ||||    
T  6483527 atacaaatcttcatcaattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttac 6483626  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  6483627 aa-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 6483723  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483724 cagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 6486994 - 6487239
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || ||||    
T  6486994 atacaaatcttcatcaattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttac 6487093  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    || |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  6487094 aa-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaatttt 6487190  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487191 cagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 51 - 272
Target Start/End: Original strand, 26583687 - 26583904
Alignment:
Q  51 tgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa- 149  Q
    ||||||||||||||  |||| ||| |  ||||||||| ||||||| |||||| || | ||||||||| ||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaa-catatttaacatgatcattaccctttcccctcagaatcatcatcaag 26583785  T
Q  150 ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T
Q  250 ttttgcagaagaattacacagca 272  Q
    |||||||||| ||||| ||||||    
T  26583883 ttttgcagaa-aattagacagca 26583904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23878817 - 23879060
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||  |||||||||| ||||||||||| | | |||||||||||| ||||||||| |||||  |||| ||||| |||||||||| ||||||||||||    
T  23878817 atacaaaacttcatcaattcatccaatcaattctattttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattac 23878916  T
Q  101 aaacagaattaacatgaccatta-ccatttcccgtcagaatcatcatcaaccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
     |||| ||||||||||| ||||| ||  ||||| |||||||||||| ||||||||||||||||||||   |||  ||| |   |||||||||||||||||    
T  23878917 -aacataattaacatgatcattaccccattcccctcagaatcatcaacaaccctaaccctcaattta--atcctcaaggttaagcaattaggtcaatttt 23879013  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
      ||||||||| || || |||| ||||||||||||||||||||||||    
T  23879014 tcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 246
Target Start/End: Complemental strand, 23089292 - 23089057
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 109  Q
    |||||||||| |||||||||||   | |||||||||||| |||||||||||||||  |||| ||||| |||||||| | || ||||||||| |||| |||    
T  23089292 ttcatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattac-aacataat 23089194  T
Q  110 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 208  Q
    |||||||| |||||||  ||||| | |||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||| |||||||    
T  23089193 taacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaattaggtcaattttccgaaatta 23089096  T
Q  209 tagattat-gattattgagagatagtctcacccttacct 246  Q
     | |||||  |||| ||||||||||||||||||||||||    
T  23089095 aatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 23101700 - 23101463
Alignment:
Q  10 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 109  Q
    ||||| |||| |||||||||||   | |||||||||||| ||||||||| |||||  |||| ||||| |||||||| | || ||||||||| |||| |||    
T  23101700 ttcatgaattcatccaatcaattatattttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattac-aacataat 23101602  T
Q  110 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 208  Q
    |||||||| |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |    ||||||||||||||||| |||||||    
T  23101601 taacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaaacaattaggtcaattttccgaaatta 23101504  T
Q  209 tagattat-gattattgagagatagtctcacccttacctta 248  Q
     | |||||  |||| ||||||||||||||||||||||||||    
T  23101503 catattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 134 - 249
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattaatgagagatag 5706040  T
Q  233 tctcacccttaccttag 249  Q
    |||||||||||||||||    
T  5706039 tctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  187 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 6260227 - 6260142
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||  ||| ||||| ||  ||||  | ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  6260227 caattttcagaaaccatatattataatcgttgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcg 6260142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 26885139 - 26885246
Alignment:
Q  149 accctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||  |||||||| || ||||| | ||||| || |||| | ||||||||||||||||| |||| ||||||||| ||||| || |||||||||||||    
T  26885139 accctaattctcaattttttctccaagaactattcca-ttagattaattttcagaaattatacatta-gattattgaaagataatcccacccttacctta 26885236  T
Q  249 gttttgcaga 258  Q
    |  |||||||    
T  26885237 gaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 23168351 - 23168288
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 23579608 - 23579545
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 19665081 - 19665044
Alignment:
Q  241 ttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||  |||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcg 19665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 111724 - 111960
Alignment:
Q  35 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccg 133  Q
    |||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  ||||||||||||| ||||||| |||||||     
T  111724 aatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-agaattaacatgatcattacccatttccct 111822  T
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattatagattatgattattgagagata 231  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  111823 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatttttcagaaattatagattatgattattgagagata 111920  T
Q  232 gtctcacccttaccttagttttgcagaagaattacacagca 272  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  111921 gtctcacccttaccttagttttgcagaa-aattagacagca 111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 101 - 368
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||| ||||||||||||||||||| |||||  |||||||| ||||| ||||||||| ||| ||||||| |||||| |||| |||| ||| || | |||    
T  101 atacaattattcatcaatttatccaaccaatcataatttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatac 200  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
    ||  | ||||||||||| |||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||     
T  201 aagaa-aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt- 296  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 272  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  297 cagaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 995 - 1240
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||||||  |||    
T  995 attcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaag-aga 1092  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||    
T  1093 attaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-caggaa 1189  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1190 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 256
Target Start/End: Original strand, 49996 - 50241
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||||||  |||    
T  49996 attcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaag-aga 50093  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||    
T  50094 attaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-caggaa 50190  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50191 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 990 - 740
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  |||||||||||| || ||||||||| |||||||| || ||||||||| || ||| |||| | |||||||  ||     
T  990 attcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatattacaag-agt 893  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||| ||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  892 attatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactat-gcaattaggtcaattttcagaaa 794  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  793 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 8046071 - 8045822
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||||||||||  | |||||||||||||||| |||| | |||||||  |||    
T  8046071 attcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattacaag-aga 8045973  T
Q  108 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 205  Q
    |||||||| | | ||||| ||||||| |||||||  || |||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  8045972 attaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaa 8045876  T
Q  206 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8045875 ttatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 272
Target Start/End: Original strand, 11847923 - 11848191
Alignment:
Q  9 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 107  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||| ||| ||     
T  11847923 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataaa-agg 11848021  T
Q  108 attaacatgaccattaccatttcc-cgtcagaatcatcatcaa-ccctaaccctcaatttattttc------caaaagctattgcaattaggtcaatttt 199  Q
    |||||||||| |||||||  |||| | |||||||| ||||||| ||||||||||||||| |||||       ||||| |||| || | ||||||||||||    
T  11848022 attaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaa-ctat-gccactaggtcaatttt 11848119  T
Q  200 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  11848120 caggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 11848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 53483743  T
Q  233 tctcacccttaccttag 249  Q
    |||||||||||||||||    
T  53483744 tctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 15408139 - 15408244
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||  ||| ||||| | ||||| ||  ||||||||     
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttcctaggctctt 15408238  T
Q  293 ctctct 298  Q
    ||||||    
T  15408239 ctctct 15408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 243  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  213 ttatgattattgagagatagtctcacccttaccttagttttg 254  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  218 attattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  218 attattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 1650219 - 1650182
Alignment:
Q  234 ctcacccttaccttagttttgcag-aagaattacacag 270  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1650219 ctcacccttaccttagttttgcagaaagaattacacag 1650182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 79 - 298
Target Start/End: Original strand, 30743 - 30962
Alignment:
Q  79 ttcattctggacatcacattacaaacagaattaacatgaccattac-catttcccgtcagaatcatcatcaa-ccctaaccctcaattt-attttccaaa 175  Q
    ||||||||| ||||||| |||||| || | ||||||||| | |||| |  ||||| ||| |||||||||||| |||||| ||||||||| |  |||||||    
T  30743 ttcattctgcacatcactttacaa-catatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaa 30841  T
Q  176 agctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaa 275  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  30842 a-ctat-gcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaa 30939  T
Q  276 tcgtttaataggctctcctctct 298  Q
    ||| ||  |||||||||||||||    
T  30940 tcgattcctaggctctcctctct 30962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 2109 - 1887
Alignment:
Q  35 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgt 134  Q
    |||||||||||| | ||||||||||||||||||  | ||||||||||||| || |||| | |||||||  ||||||||||| | |||||||  ||||  |    
T  2109 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattacaag-agaattaacataatcattacccattcca-t 2012  T
Q  135 cagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattatagattatgattattgagagatag 232  Q
    || |||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2011 caaaatcatcatcaaaccctaaccctcaaattattttccaaaa-ctata-caattaggtcaatttttcagaaattatagattatgattattgagatatag 1914  T
Q  233 tctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||    
T  1913 tctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 35 - 259
Target Start/End: Complemental strand, 8786 - 8564
Alignment:
Q  35 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgt 134  Q
    |||||||||||| | ||||||||||||||||||  | ||||||||||||| || |||| | |||||||  ||||||||||| | |||||||  ||||  |    
T  8786 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattacaag-agaattaacataatcattacccattcca-t 8689  T
Q  135 cagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattatagattatgattattgagagatag 232  Q
    || |||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  8688 cataatcatcatcaaaccctaaccctcaaattattttccaaaa-ctata-caattaggtcaatttttcagaaattatagattatgattattgagatatag 8591  T
Q  233 tctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||||||||||||||||    
T  8590 tctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3540 - 3295
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||  |||||||||| |||||||||||   | ||||||||||||  ||||||||||||||  |||| ||||| |||||||||| ||||||||||||    
T  3540 atacaaaacttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattac 3441  T
Q  101 aaacagaattaacatga-ccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattt 198  Q
     |||| |||||||||||  |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |   ||||||||||||||||    
T  3440 -aacaaaattaacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatccccaaggttaagcaattaggtcaattt 3344  T
Q  199 tcagaaattatagattat-gattattgagagatagtctcacccttacct 246  Q
    || ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3343 tccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3868 - 3624
Alignment:
Q  1 atacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattac 100  Q
    |||||||  |||||||||| |||||||||||   | |||||||||||| ||||||||| |||||  |||| ||||| |||||||| | ||||||||||||    
T  3868 atacaaaacttcatcaattcatccaatcaattatattttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattac 3769  T
Q  101 aaacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 199  Q
     |||| ||||||||||| |||||||  | ||| |||||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||    
T  3768 -aacataattaacatgatcattacccatccccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaattaggtcaatttt 3672  T
Q  200 cagaaattatagattat-gattattgagagatagtctcacccttacct 246  Q
    | ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3671 ccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 254
Target Start/End: Complemental strand, 1845 - 1727
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 1749  T
Q  233 tctcacccttaccttagttttg 254  Q
    ||||||||||||||||||||||    
T  1748 tctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 254
Target Start/End: Complemental strand, 5868 - 5750
Alignment:
Q  134 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 232  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 5772  T
Q  233 tctcacccttaccttagttttg 254  Q
    ||||||||||||||||||||||    
T  5771 tctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 920 - 991
Alignment:
Q  182 tgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 253  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  920 tgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 8065 - 8136
Alignment:
Q  182 tgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 253  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8065 tgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 800 - 899
Alignment:
Q  3 acaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaa 102  Q
    ||||||||||||||||||||||||||  ||  |||| ||||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  800 acaaatattcatcaatttatccaatccctcataattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 7945 - 8044
Alignment:
Q  3 acaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaa 102  Q
    ||||||||||||||||||||||||||  ||  |||| ||||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  7945 acaaatattcatcaatttatccaatccctcataattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

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Target: scaffold0107 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 40587 - 40482
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| ||  ||||||||     
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctctt 40488  T
Q  293 ctctct 298  Q
    ||||||    
T  40487 ctctct 40482  T

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Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 255
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  136 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 234  Q
    |||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattattgagagatagtc 45289  T
Q  235 tcacccttaccttagttttgc 255  Q
    ||||||||||||||| |||||    
T  45288 tcacccttaccttagatttgc 45268  T

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Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 135473 - 135578
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 292  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||  ||| ||||||| ||||| ||  ||||||||     
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttcttaggctctt 135572  T
Q  293 ctctct 298  Q
    ||||||    
T  135573 ctctct 135578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 22646 - 22543
Alignment:
Q  195 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcct 294  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||| ||  |||||||| ||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttcctaggctcttct 22547  T
Q  295 ctct 298  Q
    ||||    
T  22546 ctct 22543  T

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Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaagaattacacagca 272  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

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Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  214 tatgattattgagagatagtctcacccttacctt 247  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

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Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 3478 - 3557
Alignment:
Q  9 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctg 87  Q
    ||||||||||| |||||||||  |  ||||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  3478 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctg 3557  T

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Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  197 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 717 - 780
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcagaa 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  185 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  193 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 272
Target Start/End: Original strand, 26892 - 26930
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagca 272  Q
    |||||||||||||||||||||||||| || |||||||||    
T  26892 ctcacccttaccttagttttgcagaaaaaatacacagca 26930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 252  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 493082 - 493019
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 258  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  220 tattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Complemental strand, 14668 - 14604
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcctctct 298  Q
    |||||||||||||||| |||||||||  ||| ||||||| ||||| || ||||||||| ||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcataggctcttctctct 14604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 5922 - 5857
Alignment:
Q  184 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 23624 - 23559
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 259  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 46746 - 46708
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaattacacagca 272  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  46746 ctcacccttaccttagttttgcagaagaaatgcacagca 46708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 55761 - 55733
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaa 262  Q
    |||||||||||||||||||||||||||||    
T  55761 ctcacccttaccttagttttgcagaagaa 55733  T

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Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 62147 - 62119
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaa 262  Q
    |||||||||||||||||||||||||||||    
T  62147 ctcacccttaccttagttttgcagaagaa 62119  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  202 gaaattatagattatgattattgagagatagtctcacccttacctt 247  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 2256 - 2219
Alignment:
Q  241 ttaccttagttttgcagaagaattacacagcacaatcg 278  Q
    |||||||||||||||||||  |||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcg 2219  T

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Target: scaffold0249; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 13947 - 13894
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 249  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 732 - 788
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  199 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 248  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  194 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 246  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  192 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  196 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 248  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Original strand, 266108 - 266136
Alignment:
Q  234 ctcacccttaccttagttttgcagaagaa 262  Q
    |||||||||||||||||||||||||||||    
T  266108 ctcacccttaccttagttttgcagaagaa 266136  T

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