View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15817_low_6 (Length: 228)
Name: NF15817_low_6
Description: NF15817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15817_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 41938419 - 41938611
Alignment:
| Q |
17 |
aaaataaacataaatagctgtacaatattcccttgtttgccttccgaactacttctttattaggatgtcctacatatattgtcaccttttcctttaatcc |
116 |
Q |
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| T |
41938419 |
aaaataaacataaatagctgtacaatattcccttgtttgccttccgaactacttctttattaggatgtcctacatatattgtcaccttttcctttaatcc |
41938518 |
T |
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| Q |
117 |
tatacaccatagggactaagaaataattgaaacacgttgaaaacgacaaaggctccaagatcatatacaatacatcctcttaggcatggtaag |
209 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41938519 |
tatacaccataggtactaagaaataattgaaacacgttgaaaacgacaaaggctccaagatcatatacaatacatcctcttaggcatggtaag |
41938611 |
T |
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