View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15819_low_6 (Length: 254)
Name: NF15819_low_6
Description: NF15819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15819_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 23830685 - 23830908
Alignment:
| Q |
14 |
aaaaaaggttcaattatgctccacttgcttacaagtcatggaagcttaccacttgctagagccaacttatagtacgagaagctatctgaaaccaaatgta |
113 |
Q |
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| T |
23830685 |
aaaaaaggttcaattatgctccacttgcttacaagtcatggaagcttaccacttgctagagccaacttatagtacgagaagctatctgaaaccaaatgtc |
23830784 |
T |
|
| Q |
114 |
gggatgttaacagtaaaatctaatggactagaaaactttgcnnnnnnntattaaggattttgtccaatcaaaacaaaacaaaagggggtccattacagtt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23830785 |
gggatgttaacagtaaaatctaatggactagaaaactttgcaaaaaaatattaaggattttgtccaatcaaaacaaaacaaaagggggtccattacagtt |
23830884 |
T |
|
| Q |
214 |
aaaccagttcccacaacatgtcat |
237 |
Q |
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|||||||||||||||||||||||| |
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| T |
23830885 |
aaaccagttcccacaacatgtcat |
23830908 |
T |
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