View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15821_high_4 (Length: 590)
Name: NF15821_high_4
Description: NF15821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15821_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 532; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 19 - 581
Target Start/End: Complemental strand, 45641752 - 45641185
Alignment:
| Q |
19 |
tttcaaaccaacagctgatcaagcagttctcaccctttcatattttaaccacaacttaatggaccacattgctctaaatgaaaatgacaacagatattct |
118 |
Q |
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| T |
45641752 |
tttcaaaccaacagctgatcaagcagttctcaccctttcatattttaaccacaacttaatggaccacattgctctaaatgaaaatgacaacagatattct |
45641653 |
T |
|
| Q |
119 |
cactatgagtttctctacatgttctgatgctattcttgcc-----cctcaactaaaccattttcattgaacatcccataaattcaccgcaagtgttctct |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641652 |
cactatgagtttctctacatgttctgatgctattcttgccttgcccctcaactaaaccattttcattgaacatcccataaattcaccgcaagtgttctct |
45641553 |
T |
|
| Q |
214 |
tctcagacataatgccactgaatttcaaaatgagacaggacagaagaaacaccccacaatacagacaaattccatctgaacacaacaaaataaaatcaat |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641552 |
tctcagacataatgccactgaatttcaaaatgagacaggacagaacaaacacccaacaatacagacaaattccatctgaacacaacaaaataaaatcaat |
45641453 |
T |
|
| Q |
314 |
aatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttc |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641452 |
aatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaacaaaaatcattcttctctaataaactcttc |
45641353 |
T |
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| Q |
414 |
aacatagaatgagtaaatttaggatcattagggtcactaccagttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaa |
513 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641352 |
aacatagaatgagtaaatttaggatcattagggtcactactagttgacccattagggttttccaatacatttggacgcgaaaaacaaaacttgcaaccaa |
45641253 |
T |
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| Q |
514 |
atccatttcgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctatgctactc |
581 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
45641252 |
atccatttcgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctctgctactc |
45641185 |
T |
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