View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15822_high_5 (Length: 367)
Name: NF15822_high_5
Description: NF15822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15822_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 21 - 353
Target Start/End: Original strand, 36672272 - 36672604
Alignment:
| Q |
21 |
aagagttcggaagatagggtttctgctcaggcaaatgaagtagctcaactgccagcgtaggtggaagctctaacagtgctgtgaatgagcttgcgttttc |
120 |
Q |
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| T |
36672272 |
aagagttcggaagatagggtttctgctcaggcaaatgaagtagctcaaccgccagcgtaggtggaagctctaacagtgctgtgaatgagcttgcgttttc |
36672371 |
T |
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| Q |
121 |
cggtgccggcgccggaaccataattccttgaatttcttcgtcaaattgaacagaatcgtcgtgaatagatccacttaatcctactgtagcttgttccatt |
220 |
Q |
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| T |
36672372 |
cggtgccggcgccggaatcataattccttgaatttcttcgtcaaattgaacagaatcgtcgtgaatggatccacttaatcctactgtagcttgttccatt |
36672471 |
T |
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| Q |
221 |
gagcaaagaaaatgaaattaaaaatccaattgaaattttgtttaatttgaagtgtgagagtgttgaaaattttgttcaatgttgtagttgagtgtgatgg |
320 |
Q |
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| T |
36672472 |
gagcaaagaaaatgaaattaaaaatccaattgaaattttgtttaatttgaagtgtgagagtgttgaaaattttgttcaatgttgtagttgagtgtgatgg |
36672571 |
T |
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| Q |
321 |
cggtcaatctgtttttgtttgtgttgttctgtg |
353 |
Q |
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| T |
36672572 |
cggtcaatctgtttttgtttttgttgttctgtg |
36672604 |
T |
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