View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15823_low_26 (Length: 383)
Name: NF15823_low_26
Description: NF15823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15823_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 367
Target Start/End: Original strand, 4881816 - 4882182
Alignment:
| Q |
1 |
tcaattttaatggatcgaattgactaatgaaagacatatttgatcaccaatttaaccattgaaagacacatccaaagaccaaactaactnnnnnnntaaa |
100 |
Q |
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| T |
4881816 |
tcaatttcaatggatcaaattgactaatgaaagacatatttgatcacgaatttaaccattcaaagacacattcaaagaccaaactaactaaaaaaataaa |
4881915 |
T |
|
| Q |
101 |
gtacattcatgtatgcttttgtaattttgaaagaaagattatagtatcgctttttcacaaattcaatgaataaagtgacaaattactcacgcttttccat |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
4881916 |
atacattcatgtatgcttttgtaattttgaaacaaagactatagtatcgctttctcacaaattcaatgaataaagtgacaaattactcacacttttccat |
4882015 |
T |
|
| Q |
201 |
caaatggctatttctcacaaattagaagaacaaagtgacaatttattcatatttttatatcaaattgctattttgcaatcgtttggtggcaaatgtatgc |
300 |
Q |
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|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4882016 |
caaatgtctatttctcacaaattagaagaacaaagtgactatttattcatatttttatatcaaattgctattttgcaatcgtttggtggcaaatgtatgc |
4882115 |
T |
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| Q |
301 |
tccccttcaccaaagggtatcgggttcaacactcggtgaatgaaactttacgcattatccattttac |
367 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4882116 |
tccccttcaccaaagggtatcgggttcaacactcggtgaatgaaactttacgcattatccattttac |
4882182 |
T |
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