View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15824_low_10 (Length: 253)

Name: NF15824_low_10
Description: NF15824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15824_low_10
NF15824_low_10
[»] chr1 (46 HSPs)
chr1 (17-240)||(11893499-11893722)
chr1 (117-171)||(16322859-16322913)
chr1 (38-171)||(37593611-37593744)
chr1 (32-148)||(33723303-33723419)
chr1 (120-171)||(14629975-14630026)
chr1 (95-167)||(29793927-29793999)
chr1 (120-171)||(10199417-10199468)
chr1 (32-171)||(11211128-11211267)
chr1 (120-171)||(28077078-28077129)
chr1 (30-153)||(32859866-32859988)
chr1 (120-171)||(34290246-34290297)
chr1 (121-167)||(3924638-3924684)
chr1 (121-171)||(6981502-6981552)
chr1 (121-171)||(12564509-12564559)
chr1 (38-152)||(15579511-15579625)
chr1 (124-180)||(35590905-35590962)
chr1 (122-171)||(45205078-45205127)
chr1 (127-171)||(5047156-5047200)
chr1 (119-171)||(26779933-26779985)
chr1 (32-80)||(26866414-26866462)
chr1 (120-156)||(48748324-48748360)
chr1 (120-171)||(6102164-6102215)
chr1 (32-99)||(7707272-7707339)
chr1 (120-167)||(12477296-12477343)
chr1 (44-87)||(24313609-24313652)
chr1 (120-171)||(45975700-45975751)
chr1 (30-140)||(49282517-49282627)
chr1 (32-86)||(4033938-4033992)
chr1 (30-60)||(5157193-5157223)
chr1 (30-80)||(24279850-24279900)
chr1 (121-171)||(34179882-34179932)
chr1 (174-216)||(48133073-48133115)
chr1 (176-213)||(2146630-2146667)
chr1 (32-65)||(3319867-3319900)
chr1 (120-153)||(4025112-4025145)
chr1 (32-61)||(24460322-24460351)
chr1 (121-162)||(44815313-44815354)
chr1 (32-80)||(6659781-6659829)
chr1 (120-172)||(26916210-26916262)
chr1 (121-153)||(33722411-33722443)
chr1 (120-168)||(35925703-35925751)
chr1 (120-148)||(39347976-39348004)
chr1 (127-171)||(43332494-43332538)
chr1 (120-156)||(43954054-43954090)
chr1 (120-168)||(46252691-46252739)
chr1 (120-148)||(47885042-47885070)
[»] chr5 (43 HSPs)
chr5 (43-171)||(37611147-37611275)
chr5 (43-171)||(37787877-37788005)
chr5 (73-171)||(12242672-12242770)
chr5 (120-167)||(12521542-12521589)
chr5 (121-171)||(20028500-20028550)
chr5 (120-167)||(2880556-2880603)
chr5 (120-171)||(18906352-18906403)
chr5 (121-172)||(38104867-38104918)
chr5 (32-103)||(40335794-40335865)
chr5 (174-216)||(26516192-26516234)
chr5 (120-170)||(28413293-28413343)
chr5 (129-171)||(29588889-29588931)
chr5 (122-171)||(10272442-10272491)
chr5 (30-86)||(10771807-10771863)
chr5 (32-80)||(13508541-13508589)
chr5 (43-171)||(32172663-32172791)
chr5 (34-65)||(5946487-5946518)
chr5 (120-171)||(7984979-7985030)
chr5 (128-171)||(17368686-17368729)
chr5 (120-171)||(33533548-33533599)
chr5 (120-171)||(36639532-36639583)
chr5 (32-87)||(41277283-41277338)
chr5 (123-153)||(499743-499773)
chr5 (128-170)||(6183455-6183497)
chr5 (121-171)||(11707065-11707115)
chr5 (32-62)||(14257567-14257597)
chr5 (32-86)||(14599293-14599347)
chr5 (121-171)||(16889745-16889795)
chr5 (121-171)||(18704046-18704096)
chr5 (120-170)||(18902806-18902856)
chr5 (30-80)||(31723906-31723956)
chr5 (121-171)||(37588370-37588420)
chr5 (120-149)||(1899186-1899215)
chr5 (32-77)||(2092463-2092508)
chr5 (35-68)||(8090049-8090082)
chr5 (30-83)||(12334277-12334330)
chr5 (32-61)||(17369323-17369352)
chr5 (120-153)||(29590638-29590671)
chr5 (122-171)||(32408603-32408652)
chr5 (122-171)||(36318784-36318833)
chr5 (122-171)||(36326021-36326070)
chr5 (31-63)||(27565128-27565160)
chr5 (120-148)||(35963274-35963302)
[»] chr8 (45 HSPs)
chr8 (120-171)||(28769348-28769399)
chr8 (35-154)||(6950349-6950468)
chr8 (71-171)||(11569417-11569517)
chr8 (120-171)||(25869275-25869326)
chr8 (120-171)||(30277254-30277305)
chr8 (120-171)||(42215091-42215142)
chr8 (121-171)||(4762519-4762569)
chr8 (36-86)||(39881646-39881696)
chr8 (127-169)||(42370377-42370419)
chr8 (42-171)||(11415164-11415293)
chr8 (52-157)||(39049296-39049401)
chr8 (32-80)||(1117408-1117456)
chr8 (32-80)||(9700102-9700150)
chr8 (127-171)||(11795102-11795146)
chr8 (121-157)||(37776714-37776750)
chr8 (31-86)||(1561372-1561427)
chr8 (120-171)||(8062339-8062390)
chr8 (96-171)||(10079055-10079130)
chr8 (120-171)||(11494156-11494207)
chr8 (32-87)||(25872346-25872401)
chr8 (120-171)||(30918123-30918174)
chr8 (129-167)||(4390070-4390108)
chr8 (174-216)||(12972750-12972792)
chr8 (32-86)||(14926903-14926957)
chr8 (73-171)||(14949876-14949974)
chr8 (32-86)||(16162855-16162909)
chr8 (121-171)||(27754414-27754464)
chr8 (133-171)||(33553250-33553288)
chr8 (174-216)||(35869731-35869773)
chr8 (119-153)||(38336059-38336093)
chr8 (27-60)||(2493057-2493090)
chr8 (32-65)||(4764010-4764043)
chr8 (32-61)||(12361314-12361343)
chr8 (120-153)||(31705113-31705146)
chr8 (122-171)||(44236834-44236883)
chr8 (31-171)||(4055536-4055676)
chr8 (26-78)||(7149219-7149271)
chr8 (127-171)||(7918789-7918833)
chr8 (120-164)||(8066849-8066893)
chr8 (120-156)||(11000585-11000621)
chr8 (34-146)||(11185256-11185368)
chr8 (127-171)||(14929154-14929198)
chr8 (32-80)||(18331815-18331863)
chr8 (32-80)||(29592489-29592537)
chr8 (30-86)||(43393691-43393747)
[»] chr4 (40 HSPs)
chr4 (32-171)||(37575857-37575996)
chr4 (32-166)||(27123273-27123407)
chr4 (122-167)||(2592320-2592365)
chr4 (30-167)||(19304940-19305077)
chr4 (32-148)||(4691881-4691997)
chr4 (120-171)||(7694019-7694070)
chr4 (120-171)||(23819099-23819150)
chr4 (120-171)||(45927359-45927410)
chr4 (120-171)||(49219149-49219200)
chr4 (120-171)||(53673667-53673718)
chr4 (32-86)||(28615429-28615483)
chr4 (30-148)||(45128229-45128347)
chr4 (121-171)||(55547054-55547104)
chr4 (122-171)||(51630121-51630170)
chr4 (123-171)||(18628555-18628603)
chr4 (120-171)||(17884078-17884129)
chr4 (128-171)||(18011881-18011924)
chr4 (120-171)||(29263380-29263431)
chr4 (32-87)||(35406028-35406083)
chr4 (128-171)||(47800633-47800676)
chr4 (122-168)||(14011247-14011293)
chr4 (32-86)||(19429804-19429858)
chr4 (36-110)||(23676767-23676841)
chr4 (174-216)||(24443932-24443974)
chr4 (30-80)||(32420977-32421027)
chr4 (121-171)||(35064865-35064915)
chr4 (121-171)||(35743292-35743342)
chr4 (121-167)||(53792585-53792631)
chr4 (174-215)||(485976-486017)
chr4 (120-153)||(5131259-5131292)
chr4 (32-61)||(15173224-15173253)
chr4 (32-61)||(25309312-25309341)
chr4 (122-171)||(28300310-28300359)
chr4 (120-153)||(29467633-29467666)
chr4 (127-171)||(825506-825550)
chr4 (75-155)||(2841652-2841732)
chr4 (119-171)||(4798574-4798626)
chr4 (32-76)||(17975258-17975302)
chr4 (174-214)||(33641004-33641044)
chr4 (120-148)||(43824316-43824344)
[»] chr6 (25 HSPs)
chr6 (30-168)||(34939526-34939664)
chr6 (37-171)||(2455820-2455954)
chr6 (32-166)||(2460072-2460206)
chr6 (121-171)||(20512654-20512704)
chr6 (120-171)||(17241261-17241312)
chr6 (121-163)||(7785754-7785796)
chr6 (120-170)||(34939755-34939805)
chr6 (127-171)||(5564144-5564188)
chr6 (120-156)||(6536972-6537008)
chr6 (120-171)||(4420653-4420704)
chr6 (30-65)||(12111083-12111118)
chr6 (174-217)||(21919967-21920010)
chr6 (121-156)||(27998426-27998461)
chr6 (37-80)||(34037314-34037357)
chr6 (174-216)||(8349798-8349840)
chr6 (32-74)||(32205934-32205976)
chr6 (120-153)||(2167167-2167200)
chr6 (120-153)||(2178800-2178833)
chr6 (120-153)||(27909647-27909680)
chr6 (131-171)||(2205610-2205650)
chr6 (44-104)||(2795338-2795398)
chr6 (35-87)||(3738195-3738247)
chr6 (95-155)||(9027604-9027664)
chr6 (119-171)||(30863256-30863308)
chr6 (30-110)||(31327525-31327605)
[»] scaffold0089 (1 HSPs)
scaffold0089 (121-171)||(33637-33687)
[»] chr3 (37 HSPs)
chr3 (121-171)||(13371127-13371177)
chr3 (42-171)||(37273144-37273273)
chr3 (95-171)||(482776-482852)
chr3 (36-167)||(29771852-29771983)
chr3 (32-79)||(49916564-49916611)
chr3 (93-171)||(9279308-9279386)
chr3 (121-171)||(26542547-26542597)
chr3 (71-153)||(43115084-43115166)
chr3 (35-171)||(33965412-33965549)
chr3 (120-171)||(13709832-13709883)
chr3 (121-172)||(23793593-23793644)
chr3 (120-171)||(34414793-34414844)
chr3 (120-171)||(35394507-35394558)
chr3 (43-142)||(41724251-41724350)
chr3 (128-171)||(48528566-48528609)
chr3 (32-79)||(51929843-51929890)
chr3 (32-86)||(1833820-1833874)
chr3 (70-147)||(2321211-2321289)
chr3 (129-171)||(22031206-22031248)
chr3 (29-111)||(24158434-24158516)
chr3 (32-86)||(25459551-25459605)
chr3 (43-153)||(31010430-31010540)
chr3 (121-171)||(41633370-41633420)
chr3 (121-171)||(41671320-41671370)
chr3 (32-86)||(44014719-44014773)
chr3 (32-86)||(45590746-45590800)
chr3 (120-162)||(48991870-48991912)
chr3 (32-65)||(584162-584195)
chr3 (120-153)||(21862184-21862217)
chr3 (120-153)||(45432948-45432981)
chr3 (27-59)||(2080999-2081031)
chr3 (121-153)||(5292530-5292562)
chr3 (127-171)||(14548737-14548781)
chr3 (120-148)||(38462314-38462342)
chr3 (30-86)||(41848635-41848691)
chr3 (120-183)||(53736129-53736193)
chr3 (121-169)||(54137636-54137684)
[»] chr2 (34 HSPs)
chr2 (120-171)||(7871653-7871704)
chr2 (32-171)||(42817297-42817436)
chr2 (36-166)||(9478314-9478444)
chr2 (99-171)||(43141881-43141953)
chr2 (32-171)||(15120193-15120332)
chr2 (120-171)||(15977995-15978046)
chr2 (120-171)||(35379025-35379076)
chr2 (129-171)||(1056371-1056413)
chr2 (121-171)||(6227761-6227811)
chr2 (126-171)||(6988125-6988170)
chr2 (35-80)||(9478058-9478103)
chr2 (34-171)||(34651959-34652096)
chr2 (121-153)||(41032965-41032997)
chr2 (128-171)||(3067396-3067439)
chr2 (120-171)||(3227692-3227743)
chr2 (120-171)||(3235393-3235444)
chr2 (120-171)||(11488287-11488338)
chr2 (120-171)||(16867749-16867800)
chr2 (126-156)||(1741529-1741559)
chr2 (129-167)||(1810678-1810716)
chr2 (121-171)||(27288641-27288691)
chr2 (120-166)||(28677668-28677714)
chr2 (121-171)||(41144220-41144270)
chr2 (32-78)||(43259938-43259984)
chr2 (129-171)||(43985021-43985063)
chr2 (32-65)||(5043481-5043514)
chr2 (32-149)||(9996770-9996887)
chr2 (32-65)||(10563481-10563514)
chr2 (32-148)||(16551760-16551877)
chr2 (127-172)||(24098111-24098156)
chr2 (120-169)||(29628752-29628801)
chr2 (32-76)||(2790343-2790387)
chr2 (32-76)||(3078529-3078573)
chr2 (32-68)||(9395242-9395278)
[»] chr7 (31 HSPs)
chr7 (120-171)||(7244690-7244741)
chr7 (120-171)||(24363610-24363661)
chr7 (36-110)||(3019854-3019928)
chr7 (32-86)||(23214950-23215004)
chr7 (129-171)||(39505966-39506008)
chr7 (30-171)||(12792417-12792558)
chr7 (32-171)||(4966166-4966308)
chr7 (30-86)||(8427108-8427164)
chr7 (127-171)||(12792579-12792623)
chr7 (126-166)||(28128410-28128450)
chr7 (120-171)||(26935566-26935617)
chr7 (32-87)||(29363602-29363657)
chr7 (120-171)||(44151489-44151540)
chr7 (32-163)||(46082054-46082185)
chr7 (33-79)||(529464-529510)
chr7 (129-171)||(12792642-12792684)
chr7 (50-148)||(20553136-20553234)
chr7 (122-172)||(33601748-33601798)
chr7 (32-61)||(22283567-22283596)
chr7 (122-171)||(25596043-25596092)
chr7 (120-153)||(27496416-27496449)
chr7 (120-153)||(27503074-27503107)
chr7 (122-171)||(33601126-33601175)
chr7 (32-65)||(40598406-40598439)
chr7 (134-171)||(46086457-46086494)
chr7 (30-78)||(5620071-5620119)
chr7 (127-167)||(12792709-12792749)
chr7 (32-60)||(25511748-25511776)
chr7 (72-172)||(27626084-27626184)
chr7 (124-168)||(29286804-29286848)
chr7 (32-108)||(31341208-31341284)
[»] scaffold0311 (1 HSPs)
scaffold0311 (120-150)||(10626-10656)
[»] scaffold0254 (1 HSPs)
scaffold0254 (120-153)||(3501-3534)
[»] scaffold0141 (1 HSPs)
scaffold0141 (30-111)||(9697-9778)
[»] scaffold0147 (1 HSPs)
scaffold0147 (36-80)||(12641-12685)
[»] scaffold0085 (1 HSPs)
scaffold0085 (174-214)||(26175-26215)


Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 11893499 - 11893722
Alignment:
Q  17 ataatctaacgtatatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11893499 ataatctaacgtatatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacac 11893598  T
Q  117 gcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaacgacttatatgataagagcttattctataagcgcttaattaagtt 216  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11893599 acacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaacaacttatatgataagagcttattctataagcgcttaattaagtt 11893698  T
Q  217 ttaatccattcttcttctaccttc 240  Q
    ||||||||||||||||||||||||    
T  11893699 ttaatccattcttcttctaccttc 11893722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 16322913 - 16322859
Alignment:
Q  117 gcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  16322913 gcacataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaa 16322859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 37593611 - 37593744
Alignment:
Q  38 ttgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagct 137  Q
    ||||||||||||| ||||| |||| ||| ||| |||||| ||| |||||  ||||  | ||| | | ||||||  ||| |  |||||| |||||||||||    
T  37593611 ttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagct 37593710  T
Q  138 tatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| ||||| ||||||||||||||||||||||    
T  37593711 tattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 33723303 - 33723419
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||| || ||  ||||  ||||||||| | || |  ||| |  ||| || |||||    
T  33723303 tttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatgttt 33723402  T
Q  132 tcagcttatttccataa 148  Q
    |||||||||||||||||    
T  33723403 tcagcttatttccataa 33723419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 14629975 - 14630026
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  14629975 cataagttgttttcagcttatttccataaagtctccaagatagcttatgaaa 14630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 29793927 - 29793999
Alignment:
Q  95 ttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    ||||||||| |||||||||||||  |||| |||||||| |||||| |||||||| | || |||||||||||||    
T  29793927 ttatggaaacaacttacaacacgtccatatgttgtttttagcttacttccataagccctccaaaatagcttat 29793999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 10199417 - 10199468
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  10199417 cataagttgttttcagcttattttcataagctctctaaaatagcttatgaaa 10199468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 11211267 - 11211128
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    |||| |||||||||||||| || || |||| |||  ||| |||| |||| || ||  |||| |||||| ||| |||||| | || |  ||||||||||||    
T  11211267 tttgaattgacttatttgagctaatttactggcattaatgcttgcgagactgattgggaaaatttatgaaaataacttatagcatgtccataagttgttt 11211168  T
Q  132 tcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    | | |||||||||||||||||| || || |||||||||||    
T  11211167 ttaacttatttccataaactctccataacagcttatgaaa 11211128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 28077078 - 28077129
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||| |||| ||||  ||||||||||||||||    
T  28077078 cataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaa 28077129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 32859866 - 32859988
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgt 129  Q
    |||||| ||||||||| |||| |||||||||||||| || ||||||||||| | ||   || |||| ||||||| || ||| |||| |  ||||| ||||    
T  32859866 tatttgaattgacttacttgagcttatctactagcataagtacttgtgagact-ttagggagagttcatggaaacaatttataacatgttcataaattgt 32859964  T
Q  130 tttcagcttatttccataaactct 153  Q
    ||||||||| ||||||||| ||||    
T  32859965 tttcagcttgtttccataagctct 32859988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 34290297 - 34290246
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||||||||||    
T  34290297 cataagttgttttcagcttattttcataagttcttcaagatagcttatgaaa 34290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 3924684 - 3924638
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||    
T  3924684 ataagttgttttcggcttatttccataaactcttcaggatagcttat 3924638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 6981552 - 6981502
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| |||||||||||||||| || ||||||||| ||||    
T  6981552 ataagttgttttcagcatatttccataaactctccagaatagcttaggaaa 6981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 12564509 - 12564559
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||  ||| ||| |||||||||||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaa 12564559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 15579625 - 15579511
Alignment:
Q  38 ttgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagct 137  Q
    |||||||| ||||| ||||||||||||| ||  |||||  ||| |||||  || || || |||||| ||||||  ||| |  ||||||||||| ||||||    
T  15579625 ttgacttaattgaatttatctactagcataagaacttgcaagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagct 15579526  T
Q  138 tatttccataaactc 152  Q
    |||||||||||||||    
T  15579525 tatttccataaactc 15579511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 35590905 - 35590962
Alignment:
Q  124 agttgttttcagcttatttccataaactcttcaaaatagcttatgaaa-cgacttata 180  Q
    ||||||||||||||||||||||||| |||| ||  ||||||||||||| |||||||||    
T  35590905 agttgttttcagcttatttccataagctctccatgatagcttatgaaatcgacttata 35590962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 45205127 - 45205078
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||| |||||| ||  |||||||||||||    
T  45205127 taagttgttttcagcttatttccatgaactctacatgatagcttatgaaa 45205078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 5047200 - 5047156
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||| |||||||  |||||||||||||    
T  5047200 tgttttcagcttatttccataagctcttcatgatagcttatgaaa 5047156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26779933 - 26779985
Alignment:
Q  119 acataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| ||||||| |||||  ||||||| |||||||||||||    
T  26779933 acataagttgttttcaacttattttcataagttcttcaagatagcttatgaaa 26779985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 26866462 - 26866414
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||| | ||||||||||| ||||||||||| |||||    
T  26866462 tttggattgacttatttcagcttatctactaacacaaatacttctgaga 26866414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 48748324 - 48748360
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttca 156  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48748324 cataagttgttttcagcttatttccataagctcttca 48748360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 6102215 - 6102164
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| |||||||||||||||||||||||| ||| | | |||||||||||||    
T  6102215 cataaattgttttcagcttatttccataaattctcccagatagcttatgaaa 6102164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 7707339 - 7707272
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatg 99  Q
    |||| ||||||||||||||| ||||||||||| | |||||||||| ||||| |||  || ||||||||    
T  7707339 tttgcattgacttatttgaatttatctactagtataaatacttgtaagattatttgagagagtttatg 7707272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 12477296 - 12477343
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||||||||||||||||||||||||| ||||| ||  |||||||||    
T  12477296 cataagttgttttcagcttatttccatacactctccatgatagcttat 12477343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 24313609 - 24313652
Alignment:
Q  44 tatttgaacttatctactagcacaaatacttgtgagattgttta 87  Q
    |||||||  ||||||||||||||||| |||||||||||||||||    
T  24313609 tatttgagtttatctactagcacaaacacttgtgagattgttta 24313652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 45975751 - 45975700
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||| |||||| ||| ||| |||||||||||||    
T  45975751 cataagctgttttcagcttattttcataaattctccaagatagcttatgaaa 45975700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 49282517 - 49282627
Alignment:
Q  30 tatttggattgact-tatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttg 128  Q
    |||||||||||||  ||||||||||||| | |||||| ||  |||| ||||| |||||  ||||| ||||| |||||||| |||||  |  |||||||||    
T  49282517 tatttggattgacaatatttgaacttatattctagcataagcacttatgagactgtttgggaaagcttatg-aaaaaactaacaacttgttcataagttg 49282615  T
Q  129 ttttcagcttat 140  Q
    ||||||||||||    
T  49282616 ttttcagcttat 49282627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 4033938 - 4033992
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||| ||||||| |||||||||| |||||| ||| ||| ||||||||||||||||    
T  4033938 tttgcattgactcatttgaacttgtctactggcataaacacttgtgagattgttt 4033992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Complemental strand, 5157223 - 5157193
Alignment:
Q  30 tatttggattgacttatttgaacttatctac 60  Q
    |||||||||||||||||||||||||||||||    
T  5157223 tatttggattgacttatttgaacttatctac 5157193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 24279900 - 24279850
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||| ||||| ||||||||||||||| |||||||| ||| ||||||||||    
T  24279900 tatttagattgtcttatttgaacttatttactagcataaacacttgtgaga 24279850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 34179882 - 34179932
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| |||||||||||||| ||||  |||| ||||||||    
T  34179882 ataagttgttttcagcgtatttccataaacttttcaggatagtttatgaaa 34179932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 48133073 - 48133115
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagtt 216  Q
    |||||||||||||| | |||| |||||||||||||||||||||    
T  48133073 acttatatgataagcgtttatgctataagcgcttaattaagtt 48133115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 2146667 - 2146630
Alignment:
Q  176 ttatatgataagagcttattctataagcgcttaattaa 213  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  2146667 ttatatgataagtgcttattttataagcgcttaattaa 2146630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 3319867 - 3319900
Alignment:
Q  32 tttggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||| ||||||||||||||    
T  3319867 tttggattgacttatttgagcttatctactagca 3319900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 4025145 - 4025112
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||| ||||||    
T  4025145 cataagttgttttcagcttatttccattaactct 4025112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Original strand, 24460322 - 24460351
Alignment:
Q  32 tttggattgacttatttgaacttatctact 61  Q
    ||||||||||||||||||||||||||||||    
T  24460322 tttggattgacttatttgaacttatctact 24460351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 44815313 - 44815354
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatag 162  Q
    |||| ||||||||||||||||||||||| |||| ||||||||    
T  44815313 ataaattgttttcagcttatttccataagctctccaaaatag 44815354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 6659829 - 6659781
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||| | |||||||||||||| ||  ||||||||||    
T  6659829 tttggattgacttattttagcttatctactagcataagcacttgtgaga 6659781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 26916262 - 26916210
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaac 172  Q
    |||||||||||| |||||||||||||||| |||| || |||| ||||| ||||    
T  26916262 cataagttgtttccagcttatttccataagctctccagaataacttataaaac 26916210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 33722411 - 33722443
Alignment:
Q  121 ataagttgttttcagcttatttccataaactct 153  Q
    |||||||||||||||||||||||||||| ||||    
T  33722411 ataagttgttttcagcttatttccataacctct 33722443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 35925751 - 35925703
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatg 168  Q
    |||||| |||||||| |||||||||||||||||| ||  ||||||||||    
T  35925751 cataagctgttttcaacttatttccataaactctccatgatagcttatg 35925703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 39347976 - 39348004
Alignment:
Q  120 cataagttgttttcagcttatttccataa 148  Q
    |||||||||||||||||||||||||||||    
T  39347976 cataagttgttttcagcttatttccataa 39348004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 43332538 - 43332494
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||  |||| |||||||| |||||||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaa 43332494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 43954054 - 43954090
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttca 156  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  43954054 cataagttgttttcagcttatctccataagctcttca 43954090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 46252691 - 46252739
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatg 168  Q
    |||||||||||||||| |||||| ||||| |||| ||| ||||||||||    
T  46252691 cataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 47885042 - 47885070
Alignment:
Q  120 cataagttgttttcagcttatttccataa 148  Q
    |||||||||||||||||||||||||||||    
T  47885042 cataagttgttttcagcttatttccataa 47885070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 37611147 - 37611275
Alignment:
Q  43 ttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttattt 142  Q
    ||||||||||||||||||| |||||| |||||||||||||||||  || || ||||| ||| |||||   ||| |  |||||| ||||||||| ||||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37611246  T
Q  143 ccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||| ||| |||||||||||||    
T  37611247 ccataagctctccaagatagcttatgaaa 37611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 37787877 - 37788005
Alignment:
Q  43 ttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttattt 142  Q
    ||||||||||||||||||| |||||| |||||||||||||||||  || || ||||| ||| |||||   ||| |  |||||| ||||||||| ||||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37787976  T
Q  143 ccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||| ||| |||||||||||||    
T  37787977 ccataagctctccaagatagcttatgaaa 37788005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 12242672 - 12242770
Alignment:
Q  73 ttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||| |||  || || ||||||||||||||||  ||| | |||| |||||||||||||||| |||||||| |||| ||| |||||||||||||    
T  12242672 ttgtgagattatttgagagagcttatggaaaaaacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttatgaaa 12242770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 12521589 - 12521542
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  12521589 cataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 20028500 - 20028550
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  20028500 ataagttgttttcagcttatttctataagctcttcataatagcttatgaaa 20028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 2880556 - 2880603
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||    
T  2880556 cataaggtgttttcagcttatttccataaactcttctgaatagcttat 2880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 18906403 - 18906352
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||||||    
T  18906403 cataagttgttttcagcttatttcgataagcttttcaagatagcttatgaaa 18906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 38104867 - 38104918
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaac 172  Q
    |||||||||||||||||||||||||||| ||||  || ||||||||||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttatgaaac 38104918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 40335794 - 40335865
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaa 103  Q
    |||||||||||||||||||  ||||||||| ||||||| |||||||||| |||||   | ||||||||||||    
T  40335794 tttggattgacttatttgagtttatctactcgcacaaacacttgtgagactgtttggtagagtttatggaaa 40335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 26516234 - 26516192
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagtt 216  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  26516234 acttatatgataagcgcttatgctataagcgcttaattaagtt 26516192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 28413293 - 28413343
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaa 170  Q
    |||||| ||||||||||||||||||||||||||| ||| ||| ||||||||    
T  28413293 cataagctgttttcagcttatttccataaactctccaagataacttatgaa 28413343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 29588931 - 29588889
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  29588931 ttttcagcttatttccataaactcttcaacatagcttacgaaa 29588889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 10272442 - 10272491
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||| |||||||||| ||| || ||||||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaa 10272491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 10771807 - 10771863
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||||| ||||||||| |||||||||| ||| ||  ||||||||||||||||    
T  10771807 tatttggattggcttatttgagcttatctactggcataagcacttgtgagattgttt 10771863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 13508589 - 13508541
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||| |||||||||||||||||||||||| ||| ||| ||||||||||    
T  13508589 tttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 171
Target Start/End: Complemental strand, 32172791 - 32172663
Alignment:
Q  43 ttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttattt 142  Q
    |||||||| ||||| |||||||| ||  ||||||||||| ||||  || || ||||||||| ||||||  ||| |  ||||||   ||||||||||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttattt 32172692  T
Q  143 ccataaactcttcaaaatagcttatgaaa 171  Q
    |||| |  ||||||  |||||||||||||    
T  32172691 ccattagttcttcatgatagcttatgaaa 32172663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 65
Target Start/End: Original strand, 5946487 - 5946518
Alignment:
Q  34 tggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||||||||||||||||    
T  5946487 tggattgacttatttgaacttatctactagca 5946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 7985030 - 7984979
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||| |||||| ||| ||| |||||||||||||    
T  7985030 cataagctgttttcagcttattttcataaattctccaagatagcttatgaaa 7984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 17368729 - 17368686
Alignment:
Q  128 gttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||    
T  17368729 gttttcagcttatttccataacctctccaagatagcttatgaaa 17368686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 33533548 - 33533599
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||| |||||    
T  33533548 cataagttgttttcaacttatttccataagctctccaagatagcttgtgaaa 33533599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 36639583 - 36639532
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||  ||||||| ||||| |||||||| |||||||||||||    
T  36639583 cataagttgttttcctcttattttcataagctcttcaagatagcttatgaaa 36639532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 41277283 - 41277338
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttta 87  Q
    |||||||| | |||||||||||||| ||||| || |||||||||||||| ||||||    
T  41277283 tttggatttatttatttgaacttatgtactaccataaatacttgtgagactgttta 41277338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 499743 - 499773
Alignment:
Q  123 aagttgttttcagcttatttccataaactct 153  Q
    |||||||||||||||||||||||||||||||    
T  499743 aagttgttttcagcttatttccataaactct 499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 6183497 - 6183455
Alignment:
Q  128 gttttcagcttatttccataaactcttcaaaatagcttatgaa 170  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||    
T  6183497 gttttcagcttatttccataagctctccaaaacagcttatgaa 6183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 11707115 - 11707065
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||| || || |||| ||| |||||||||||||    
T  11707115 ataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaa 11707065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 62
Target Start/End: Complemental strand, 14257597 - 14257567
Alignment:
Q  32 tttggattgacttatttgaacttatctacta 62  Q
    |||||||||||||||||||||||||||||||    
T  14257597 tttggattgacttatttgaacttatctacta 14257567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 14599293 - 14599347
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||||||| | |||||||||||||| |||||||| ||| |||||| |||||||||    
T  14599293 tttggattcagttatttgaacttatttactagcataaacacttgtaagattgttt 14599347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 16889795 - 16889745
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  16889795 ataagttgttttcagattatttccataaactctctagcatagcttatgaaa 16889745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 18704046 - 18704096
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||  ||||   ||||||||||||||    
T  18704046 ataagttgttttcagcttatttccataagatctttgtaatagcttatgaaa 18704096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 18902856 - 18902806
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaa 170  Q
    |||||| ||||| |||||||||||||||| |||  ||||||||||||||||    
T  18902856 cataagctgtttgcagcttatttccataagctccccaaaatagcttatgaa 18902806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 31723956 - 31723906
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||||||| ||||| |||||||| ||| |||| |||||    
T  31723956 tatttggattgacttatttgagcttatgtactagcataaacacttatgaga 31723906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 37588370 - 37588420
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| |||||||||||||||||||||| |||| || |||| |||||||||    
T  37588370 ataagctgttttcagcttatttccataagctctccagaataacttatgaaa 37588420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 1899215 - 1899186
Alignment:
Q  120 cataagttgttttcagcttatttccataaa 149  Q
    ||||||||||||||||||||||||||||||    
T  1899215 cataagttgttttcagcttatttccataaa 1899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 2092508 - 2092463
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtg 77  Q
    ||||||| |||||||||||  ||||||||||||| |||||||||||    
T  2092508 tttggatcgacttatttgagtttatctactagcataaatacttgtg 2092463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 8090082 - 8090049
Alignment:
Q  35 ggattgacttatttgaacttatctactagcacaa 68  Q
    |||||||||||||||||||||||||||| |||||    
T  8090082 ggattgacttatttgaacttatctactaacacaa 8090049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 12334277 - 12334330
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattg 83  Q
    |||||||||||||||||||||  ||||||| ||||| || || |||||||||||    
T  12334277 tatttggattgacttatttgagtttatctagtagcataactagttgtgagattg 12334330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 17369352 - 17369323
Alignment:
Q  32 tttggattgacttatttgaacttatctact 61  Q
    ||||||||||||||||||||||||||||||    
T  17369352 tttggattgacttatttgaacttatctact 17369323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 29590638 - 29590671
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  29590638 cataagttgttttcaacttatttccataaactct 29590671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 32408603 - 32408652
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||| |||| |||||||||||||| |||||||  |||||||||||||    
T  32408603 taagttggtttctgcttatttccataagctcttcaggatagcttatgaaa 32408652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 36318833 - 36318784
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||| |||||||||||||||| |||||| ||| ||| |||||||||||||    
T  36318833 taagctgttttcagcttatttacataaattctccaagatagcttatgaaa 36318784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 36326070 - 36326021
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||| |||||| ||| ||| |||||||| ||||    
T  36326070 taagttgttttcagcttatttacataaattctccaagatagcttacgaaa 36326021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 27565128 - 27565160
Alignment:
Q  31 atttggattgacttatttgaacttatctactag 63  Q
    |||||||||||||||||||||||||| ||||||    
T  27565128 atttggattgacttatttgaacttatgtactag 27565160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 35963302 - 35963274
Alignment:
Q  120 cataagttgttttcagcttatttccataa 148  Q
    |||||||||||||||||||||||||||||    
T  35963302 cataagttgttttcagcttatttccataa 35963274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 28769348 - 28769399
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28769348 cataagttgttttcagcttatttccataaactctccaaaatagcttatgaaa 28769399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 6950468 - 6950349
Alignment:
Q  35 ggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttca 134  Q
    ||||||||||||||||  ||||||||| ||| ||| | ||||||||||||||  || || ||||| ||| ||| ||  ||| |   ||||||||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttca 6950369  T
Q  135 gcttatttccataaactctt 154  Q
    |||||||||||||| |||||    
T  6950368 gcttatttccataagctctt 6950349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 11569417 - 11569517
Alignment:
Q  71 acttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaa 170  Q
    |||||||||| |||||| || || ||||||||| | ||||  ||| | |||||||||||||||||||||||| || || |||| ||  ||||||||||||    
T  11569417 acttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaa 11569516  T
Q  171 a 171  Q
    |    
T  11569517 a 11569517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 25869275 - 25869326
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||||||||| ||  ||||| |||||||    
T  25869275 cataagttgttttcagcttatttccataaactctccatgatagcctatgaaa 25869326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 30277254 - 30277305
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaaa 30277305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 42215091 - 42215142
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  42215091 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaa 42215142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 4762569 - 4762519
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||||||||||    
T  4762569 ataaattgttttcagcttatttacataagctcttcaagatagcttatgaaa 4762519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 39881646 - 39881696
Alignment:
Q  36 gattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||||||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgagattgttt 39881696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 42370377 - 42370419
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatga 169  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  42370377 tgttttcagcttatttccataaactcttcatgatagcttatga 42370419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 11415293 - 11415164
Alignment:
Q  42 cttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatt 141  Q
    ||||||||  ||||| ||||| || || |||||||||||||||||  || |||||||||||| | |||| |||| |  |||||| | || ||||||||||    
T  11415293 cttatttgtgcttatttactaacataagtacttgtgagattgttttagagagtttatggaaacagcttataacatgtccataagctattctcagcttatt 11415194  T
Q  142 tccataaactcttcaaaatagcttatgaaa 171  Q
    | || |||||||  |  |||||||||||||    
T  11415193 ttcacaaactctctaggatagcttatgaaa 11415164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 39049401 - 39049296
Alignment:
Q  52 cttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaact 151  Q
    |||||||||||||| ||| | ||||||||||||||  ||||| ||||| ||| |||||| |||| |   ||||| |||||||| ||| ||| |||||| |    
T  39049401 cttatctactagcataaacatttgtgagattgtttgtgaaagcttatgaaaacaacttataacatgtcaataagctgttttcaacttgtttgcataaaat 39049302  T
Q  152 cttcaa 157  Q
    ||||||    
T  39049301 cttcaa 39049296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 1117456 - 1117408
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    |||||||||||||| |||||||||| |||||||| ||| ||||||||||    
T  1117456 tttggattgacttacttgaacttatatactagcataaacacttgtgaga 1117408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9700150 - 9700102
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    |||||||| |||||||||| |||||||||||||| ||| ||||||||||    
T  9700150 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 9700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 11795146 - 11795102
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||| |||| || ||||||||||||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 37776714 - 37776750
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaa 157  Q
    |||||||||| ||||||||||||||||||||||||||    
T  37776714 ataagttgttatcagcttatttccataaactcttcaa 37776750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 1561427 - 1561372
Alignment:
Q  31 atttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||||| |||||||| |||||||| | ||| ||| ||||||||||||||||    
T  1561427 atttggattgatttatttgatcttatctaatggcataaacacttgtgagattgttt 1561372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 8062390 - 8062339
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||||||||| ||||  || |||||||||||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaa 8062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 10079055 - 10079130
Alignment:
Q  96 tatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||| ||||||  |||||  ||||||||||||| ||||| |||||||||||| | || ||||||| ||||||    
T  10079055 tatggaaacaacttaatacacgtccataagttgttttaagcttctttccataaactttccagaatagctcatgaaa 10079130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 11494207 - 11494156
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| || ||||||||||||| ||||| |||||||| |||||||||||||    
T  11494207 cataagctgctttcagcttattttcataagctcttcaagatagcttatgaaa 11494156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 25872346 - 25872401
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttta 87  Q
    |||||||||||| | ||||||||||| ||||||| | | |||||||||||||||||    
T  25872346 tttggattgactaacttgaacttatcaactagcatacacacttgtgagattgttta 25872401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 30918174 - 30918123
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||| |||| ||| | | |||||||||    
T  30918174 cataagttgttttcagcttatttccataagctctccaagaaaacttatgaaa 30918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 4390070 - 4390108
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  4390070 ttttcagcttatttccataagctcatcaaaatagcttat 4390108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 12972792 - 12972750
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagtt 216  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  12972792 acttatatgataaatgcttatgctataagcgcttaattaagtt 12972750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 14926903 - 14926957
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||||||||||||||||||| |||| ||| ||  |||||||||| |||||    
T  14926903 tttggattgacttatttgaacttatttactggcataagcacttgtgagactgttt 14926957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 14949974 - 14949876
Alignment:
Q  73 ttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||| |||||| || || ||||| ||| ||||||  ||| |  |||||| ||||||||||||||||| |||| ||||| |  |||||||||||||    
T  14949974 ttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaa 14949876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 16162909 - 16162855
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||| |||||||||  ||||||||||||| ||| |||||||||| |||||    
T  16162909 tttggattggcttatttgagtttatctactagcataaacacttgtgagactgttt 16162855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 27754464 - 27754414
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||  |||||||||||| ||||| |||| |||||||||||||||||    
T  27754464 ataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaa 27754414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 33553288 - 33553250
Alignment:
Q  133 cagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  33553288 cagcttatttccataagctcttcaagatagcttatgaaa 33553250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 35869773 - 35869731
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagtt 216  Q
    |||||||||||||| |||||| ||||||||||||||| |||||    
T  35869773 acttatatgataagtgcttatgctataagcgcttaataaagtt 35869731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 38336059 - 38336093
Alignment:
Q  119 acataagttgttttcagcttatttccataaactct 153  Q
    |||||||||||||||| ||||||||||||||||||    
T  38336059 acataagttgttttcaacttatttccataaactct 38336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 2493090 - 2493057
Alignment:
Q  27 gtatatttggattgacttatttgaacttatctac 60  Q
    |||||||||||||||||||||||||| |||||||    
T  2493090 gtatatttggattgacttatttgaacatatctac 2493057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 4764043 - 4764010
Alignment:
Q  32 tttggattgacttatttgaacttatctactagca 65  Q
    |||||||||||||||||||||||||| |||||||    
T  4764043 tttggattgacttatttgaacttatccactagca 4764010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 12361343 - 12361314
Alignment:
Q  32 tttggattgacttatttgaacttatctact 61  Q
    ||||||||||||||||||||||||||||||    
T  12361343 tttggattgacttatttgaacttatctact 12361314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 31705146 - 31705113
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    |||||| |||||||||||||||||||||||||||    
T  31705146 cataagctgttttcagcttatttccataaactct 31705113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 44236834 - 44236883
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||| ||||| |||| ||| |||||||||||||    
T  44236834 taagttattttcagcttattttcataagctctccaatatagcttatgaaa 44236883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 4055536 - 4055676
Alignment:
Q  31 atttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgtt 130  Q
    |||||||||  ||||||||||||||||| |||  | |||| ||||| | | |||||  || ||||||| |||| ||||||  ||| |  |||||  ||||    
T  4055536 atttggattttcttatttgaacttatctgctattataaatgcttgtaaaactgtttgggagagtttatagaaataacttatgacatgtccataaactgtt 4055635  T
Q  131 ttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||| ||| ||||   | |||||||||||||    
T  4055636 ttcagcttatttccttaagctctctgagatagcttatgaaa 4055676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 7149271 - 7149219
Alignment:
Q  26 cgtatatttggattgacttatttgaacttatctactagcacaaatacttgtga 78  Q
    ||||| |||| ||||||||||||||||||||| ||||||  ||| ||||||||    
T  7149271 cgtatgtttgaattgacttatttgaacttatcaactagcgaaaacacttgtga 7149219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 7918789 - 7918833
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||| || |||| ||| |||||||||||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaa 7918833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 8066849 - 8066893
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagct 164  Q
    |||||||||||||||||||||||  ||||||||| ||| ||||||    
T  8066849 cataagttgttttcagcttattttaataaactctacaagatagct 8066893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 11000585 - 11000621
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttca 156  Q
    |||||||||| |||||||||||||||||| |||||||    
T  11000585 cataagttgtcttcagcttatttccataagctcttca 11000621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 11185368 - 11185256
Alignment:
Q  34 tggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttc 133  Q
    ||||||| ||||||||| |||||||| ||| | || ||| ||||| | |||||| || |  || |||||| | |||| |||| |  ||||||||||||||    
T  11185368 tggattggcttatttgagcttatctattagaataagtacatgtgaaactgtttatgagatcttttggaaacatcttataacatgttcataagttgttttc 11185269  T
Q  134 agcttatttccat 146  Q
    | |||||||||||    
T  11185268 aacttatttccat 11185256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14929154 - 14929198
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||| || |||| ||| |||||||||||||    
T  14929154 tgttttcagcttatttccaaaagctctgcaacatagcttatgaaa 14929198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 18331863 - 18331815
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||||| ||||||||||| || ||  ||||||||||    
T  18331863 tttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 29592489 - 29592537
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||||| ||| |||| | ||||||| ||||||||||    
T  29592489 tttggattgacttatttgagcttgtctatttgcacaaacacttgtgaga 29592537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 43393691 - 43393747
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||||||||||||| | |||||||||| ||| ||| |||| ||||| |||||    
T  43393691 tatttggattgacttatttaagcttatctacttgcaaaaacacttttgagactgttt 43393747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 37575857 - 37575996
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    |||||||||||||||||||  |||||| |||||| |||  || |||| |||||||  || |  ||||| ||| |||||| ||||  | ||||||||||||    
T  37575857 tttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataacatactcataagttgttt 37575956  T
Q  132 tcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||||| |||| |||| ||||    
T  37575957 tcagctcatttccataaactcttcataatatcttacgaaa 37575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 27123273 - 27123407
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    |||||||| |||||||||| |||||  ||||||| || ||||||||||| |||||  || || ||||||||| ||||||  ||| |    ||||||||||    
T  27123273 tttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttt 27123372  T
Q  132 tcagcttatttccataaactcttcaaaatagctta 166  Q
    ||| ||||||||||||| |||| || |||||||||    
T  27123373 tcaacttatttccataagctctccataatagctta 27123407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 2592320 - 2592365
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 19305077 - 19304940
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgt 129  Q
    |||||||||||||||||||||  ||||||| |  || ||  | |||||||||||| |  || | ||| |||||| | ||||  ||| |  ||||||||||    
T  19305077 tatttggattgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccataagttgt 19304978  T
Q  130 tttcagcttatttccataaactcttcaaaatagcttat 167  Q
    ||||||||| ||||||| |||||| |||||||||||||    
T  19304977 tttcagcttgtttccattaactctccaaaatagcttat 19304940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 4691997 - 4691881
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    ||||| |||| |||||||| ||||||||||  |||||  |||||||||| | |||  ||||  ||||||||| ||||||  ||| || |||| |||||||    
T  4691997 tttggtttgatttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccatatgttgttt 4691898  T
Q  132 tcagcttatttccataa 148  Q
    ||||||||||| |||||    
T  4691897 tcagcttattttcataa 4691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 7694019 - 7694070
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  7694019 cataagttgttttcagcttatttccataaactctccaggataacttatgaaa 7694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 23819150 - 23819099
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| |||||||| |||| |||||||| |||||||||||||    
T  23819150 cataagttgttttcatcttatttctataagctcttcaagatagcttatgaaa 23819099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 45927410 - 45927359
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| ||||||||||||||||||||||||||| || |||||||| |||||    
T  45927410 cataagctgttttcagcttatttccataaactctccataatagcttctgaaa 45927359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 49219200 - 49219149
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||| ||||| || |||| ||||||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaa 49219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 53673667 - 53673718
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  53673667 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaa 53673718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 28615483 - 28615429
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||||||||||| |  ||||||||||||| ||| ||||||||||||||||    
T  28615483 tttggattgacttatttaagtttatctactagcataaacacttgtgagattgttt 28615429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 45128229 - 45128347
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgt 129  Q
    ||||| |||||||||||||||||||||||||  ||| ||  || ||||| |||||||  || || ||||||||| |||| | | || |  ||| || |||    
T  45128229 tatttagattgacttatttgaacttatctaccggcataaccacatgtgatattgtttgagagagcttatggaaacaactgatatcatgtccatgagctgt 45128328  T
Q  130 tttcagcttatttccataa 148  Q
    |||||||||||||||||||    
T  45128329 tttcagcttatttccataa 45128347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 55547054 - 55547104
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||| |||||||||||||||||| ||||  |||||||||||||    
T  55547054 ataagttgtttttagcttatttccataaacttttcagcatagcttatgaaa 55547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 51630170 - 51630121
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||| |||||||||||||||| |||||| ||||||| |||||||||||||    
T  51630170 taagatgttttcagcttattttcataaattcttcaagatagcttatgaaa 51630121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 18628555 - 18628603
Alignment:
Q  123 aagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||| |||| ||| ||| |||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaa 18628603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 17884129 - 17884078
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||| |||| ||||| |||| ||| |||||||||||||    
T  17884129 cataagttgttttcagctaattttcataagctctccaatatagcttatgaaa 17884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 18011924 - 18011881
Alignment:
Q  128 gttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||    
T  18011924 gtttttagcttattttcataaactcttcaagatagcttatgaaa 18011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 29263431 - 29263380
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||| || |||| ||  |||||||||||||    
T  29263431 cataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaa 29263380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 35406083 - 35406028
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttta 87  Q
    |||| |||| ||||||| ||| ||||||| ||||||||||||||||||| ||||||    
T  35406083 tttgaattggcttatttaaacctatctacaagcacaaatacttgtgagactgttta 35406028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 47800676 - 47800633
Alignment:
Q  128 gttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaa 47800633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 14011293 - 14011247
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatg 168  Q
    |||| |||||||||||||||||||||| |||| ||| ||||||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttatg 14011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 19429858 - 19429804
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||| |||||||||||||||||||||| ||| ||  || |||||||||||||    
T  19429858 tttggatcgacttatttgaacttatctactcgcataagcacatgtgagattgttt 19429804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 23676841 - 23676767
Alignment:
Q  36 gattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaactta 110  Q
    |||||||||||||||||||||||||| | | || ||||| || ||||||||  || || ||||||||| ||||||    
T  23676841 gattgacttatttgaacttatctacttgtataagtacttttgtgattgtttgagatagcttatggaaacaactta 23676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 24443974 - 24443932
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagtt 216  Q
    |||||||||||||| |||||| ||||||||||||||| |||||    
T  24443974 acttatatgataagtgcttatgctataagcgcttaataaagtt 24443932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 32420977 - 32421027
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||||||| |||| ||||||||| ||  ||||||||||    
T  32420977 tatttggattgacttatttgagcttacctactagcataagcacttgtgaga 32421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 35064915 - 35064865
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||| |||||||||||||||||||||||||||| ||  ||| |||||||||    
T  35064915 ataaattgttttcagcttatttccataaactctccatgatatcttatgaaa 35064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 35743342 - 35743292
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||| || |||||||||||||||||||||  |||| ||||||||    
T  35743342 ataagttgtttccaacttatttccataaactcttcatgatagtttatgaaa 35743292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 53792631 - 53792585
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||||||||||||||||||| |||||||||| ||| |||| ||||    
T  53792631 ataagttgttttcagcttattttcataaactctccaagatagtttat 53792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 486017 - 485976
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagt 215  Q
    |||| ||||||||| |||||| ||||||||||||||||||||    
T  486017 acttttatgataagcgcttatgctataagcgcttaattaagt 485976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 5131259 - 5131292
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  5131259 cataagttgttttcagcttatttccataagctct 5131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Original strand, 15173224 - 15173253
Alignment:
Q  32 tttggattgacttatttgaacttatctact 61  Q
    ||||||||||||||||||||||||||||||    
T  15173224 tttggattgacttatttgaacttatctact 15173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Complemental strand, 25309341 - 25309312
Alignment:
Q  32 tttggattgacttatttgaacttatctact 61  Q
    ||||||||||||||||||||||||||||||    
T  25309341 tttggattgacttatttgaacttatctact 25309312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 28300310 - 28300359
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||| ||||||| ||||| |||||||| ||||| |||||||    
T  28300310 taagttgttttcaacttattttcataagctcttcaagatagcctatgaaa 28300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 29467633 - 29467666
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    |||||| |||||||||||||||||||||||||||    
T  29467633 cataagctgttttcagcttatttccataaactct 29467666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 825506 - 825550
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| |||||  ||| |||||||||||||||||    
T  825506 tgttttcagcttattttcataagttctccaaaatagcttatgaaa 825550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 2841732 - 2841652
Alignment:
Q  75 gtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttc 155  Q
    |||||||||||| ||| |||||||| ||  ||||||  ||| |   |||||||||||||||||||| ||||||||| ||||    
T  2841732 gtgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgttttcagcttatatccataaacacttc 2841652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 4798574 - 4798626
Alignment:
Q  119 acataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||| |||||| ||||||||| ||||| |||| ||| |||||||||||||    
T  4798574 acataagctgttttgagcttatttgcataagctctccaagatagcttatgaaa 4798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 17975258 - 17975302
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgt 76  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||||    
T  17975258 tttggattgacttatttgagcttatctaccaacacaaacacttgt 17975302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 33641044 - 33641004
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaag 214  Q
    |||||||||||||| | ||||||||||||| ||||||||||    
T  33641044 acttatatgataagcgattattctataagcacttaattaag 33641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 43824344 - 43824316
Alignment:
Q  120 cataagttgttttcagcttatttccataa 148  Q
    |||||||||||||||||||||||||||||    
T  43824344 cataagttgttttcagcttatttccataa 43824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 34939664 - 34939526
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgt 129  Q
    ||||||||||| |||||||||||||||||| |  |  ||  |||||| | |||||||  || || ||||||||| ||||||  |||||  | ||||||||    
T  34939664 tatttggattggcttatttgaacttatctagtgacgtaacgacttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgt 34939565  T
Q  130 tttcagcttatttccataaactcttcaaaatagcttatg 168  Q
    ||||||||||||||||||| |||||||  ||||||||||    
T  34939564 tttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 2455954 - 2455820
Alignment:
Q  37 attgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagc 136  Q
    |||||||||||||| |||||||||  ||| ||  ||||| |||||||||||  | || ||||||||| ||||||  ||| || |||||  | |||||| |    
T  2455954 attgacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaac 2455855  T
Q  137 ttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||| |||| ||| |||||||||||||    
T  2455854 ttatttccataagctctccaagatagcttatgaaa 2455820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 2460072 - 2460206
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    |||||||| |||||||||| |||||  ||||||| || ||||||||||| |||||  || || ||||||||| ||||||  ||| |    ||||||||||    
T  2460072 tttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttt 2460171  T
Q  132 tcagcttatttccataaactcttcaaaatagctta 166  Q
    ||| ||||||||||||| |||| || |||||||||    
T  2460172 tcaacttatttccataagctctccataatagctta 2460206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 20512654 - 20512704
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  20512654 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 20512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 17241261 - 17241312
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||| ||||||    
T  17241261 cataagttgttttcaacttatttccataaactctccaagatagctaatgaaa 17241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 7785754 - 7785796
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagc 163  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  7785754 ataagttgttttcagcttatttccataagctctccaaaatagc 7785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 34939805 - 34939755
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaa 170  Q
    ||||| |||||||||||||||||||||||||||| ||  ||||||||||||    
T  34939805 cataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 5564144 - 5564188
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| |||||||||||||| | |||||||||||    
T  5564144 tgttttcagcttatttgcataaactcttcaagacagcttatgaaa 5564188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 6537008 - 6536972
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttca 156  Q
    ||||||||||||||||||||||||||||| |||||||    
T  6537008 cataagttgttttcagcttatttccataagctcttca 6536972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 4420704 - 4420653
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||||||||| |||| ||| |||||||| ||||    
T  4420704 cataagctgttttcagcttatttccataagctctccaagatagcttaggaaa 4420653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 12111118 - 12111083
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||||| ||||||||||||||    
T  12111118 tatttggattgacttatttgagcttatctactagca 12111083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 21920010 - 21919967
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagttt 217  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||    
T  21920010 acttatatgataagtacttatgctataagcgcttaattaagttt 21919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 27998426 - 27998461
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttca 156  Q
    ||||||||||||||||||||||| ||||||||||||    
T  27998426 ataagttgttttcagcttatttctataaactcttca 27998461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 34037314 - 34037357
Alignment:
Q  37 attgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||| ||||||||||||||||||||||| || |||||||||||    
T  34037314 attgatttatttgaacttatctactagcataagtacttgtgaga 34037357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 8349798 - 8349840
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaagtt 216  Q
    |||||||||||||| | |||| |||||||||||||||||||||    
T  8349798 acttatatgataagtggttatgctataagcgcttaattaagtt 8349840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 32205934 - 32205976
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatactt 74  Q
    ||||||||||||||||||| |||||||||||||| || |||||    
T  32205934 tttggattgacttatttgaccttatctactagcataagtactt 32205976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 2167167 - 2167200
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  2167167 cataagttgttttcagcttatttccataatctct 2167200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 2178800 - 2178833
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  2178800 cataagttgttttcagcttatttccataatctct 2178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27909647 - 27909680
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  27909647 cataagttgttttcagcttatttccataagctct 27909680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 2205610 - 2205650
Alignment:
Q  131 ttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||| |||| ||| |||||||||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaa 2205650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 2795398 - 2795338
Alignment:
Q  44 tatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaa 104  Q
    |||||| |||||||||||  || |||||||||||||| |||||| || || ||||||||||    
T  2795398 tatttgtacttatctactgacataaatacttgtgagactgtttaggagagcttatggaaaa 2795338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 3738247 - 3738195
Alignment:
Q  35 ggattgacttatttgaacttatctactagcacaaatacttgtgagattgttta 87  Q
    ||||||||||||||||  ||||||||||||| ||  |||||||||| ||||||    
T  3738247 ggattgacttatttgagtttatctactagcataagcacttgtgagactgttta 3738195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 9027664 - 9027604
Alignment:
Q  95 ttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttc 155  Q
    ||||||||| ||||||  ||| |  ||||||||||||||||||||||| ||||| ||||||    
T  9027664 ttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctcttc 9027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 30863308 - 30863256
Alignment:
Q  119 acataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||| ||| |||| ||||||||  |||| |||||||    
T  30863308 acataagttgttttcagcttacttctataagctcttcaagctagcctatgaaa 30863256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 31327525 - 31327605
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaactta 110  Q
    |||||| |||||||||||| | ||||| |||||||  ||| |||||||| | | |||  ||||||||||||||||| ||||    
T  31327525 tatttgaattgacttatttaagcttatttactagcctaaacacttgtgaaactatttgtgaaagtttatggaaaaagctta 31327605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 33637 - 33687
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  33637 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 33687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 13371177 - 13371127
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  13371177 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 13371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 37273273 - 37273144
Alignment:
Q  42 cttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatt 141  Q
    ||||||||||||||| || ||||| ||  ||| |||||| |||||  || || ||||||||| ||||||  ||| |  ||||||||||||||| ||||||    
T  37273273 cttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatt 37273174  T
Q  142 tccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||  ||| ||| |||||||||||||    
T  37273173 tccataagttctccaagatagcttatgaaa 37273144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 482776 - 482852
Alignment:
Q  95 ttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||| |||||| |||| || |||| | | ||||||||||||||||||||||||||||| |||| ||||||||    
T  482776 ttatggaaacaacttataacatgctcatatgatattttcagcttatttccataaactcttcaagatagtttatgaaa 482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 29771983 - 29771852
Alignment:
Q  36 gattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcag 135  Q
    |||||| ||||||||||||||| |||  || ||||||| |||||| | |||| || || |||  |||| ||||||  ||| |  |||||||||||||||     
T  29771983 gattgagttatttgaacttatcaactgacataaatactcgtgagactatttatgagagcttaaagaaacaacttaggacatgtccataagttgttttcaa 29771884  T
Q  136 cttatttccataaactcttcaaaatagcttat 167  Q
    ||||||||||||| ||  |||| |||||||||    
T  29771883 cttatttccataagcttctcaagatagcttat 29771852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 49916611 - 49916564
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgag 79  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||    
T  49916611 tttggattgatttatttgaacttatctactagcacgaacacttgtgag 49916564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 9279308 - 9279386
Alignment:
Q  93 gtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||| | |||| |||| | | ||||| |||||||||||||||||| |||||||||||  |||| ||||||||    
T  9279308 gtttatggaaacagcttataacatgtatataagctgttttcagcttatttccttaaactcttcatgatagtttatgaaa 9279386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 26542597 - 26542547
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||| ||||||||| |||||||||||||||||| || ||||||||||||||    
T  26542597 ataacttgttttcaacttatttccataaactctccataatagcttatgaaa 26542547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 43115166 - 43115084
Alignment:
Q  71 acttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||   | |||||||||||| ||||||  ||| |  ||||| ||||||||||||||||||||||| ||||    
T  43115166 acttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctct 43115084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 33965412 - 33965549
Alignment:
Q  35 ggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttca 134  Q
    |||||||| ||||||| ||||||||||  |  ||| || ||||||| |||||| || |  ||||||||| | | ||  ||| || |||||||| ||||||    
T  33965412 ggattgacatatttgagcttatctactgacttaaacacatgtgagactgtttaggagaccttatggaaatagcatatgacatgcccataagttattttca 33965511  T
Q  135 gcttattt-ccataaactcttcaaaatagcttatgaaa 171  Q
    |||| ||| |||||| |||||||| |||||||||||||    
T  33965512 gctttttttccataagctcttcaagatagcttatgaaa 33965549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 13709832 - 13709883
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| ||||||| ||||||||| ||  |||||||||||||    
T  13709832 cataagttgttttcagtttatttcaataaactctccaggatagcttatgaaa 13709883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 23793644 - 23793593
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaac 172  Q
    ||||||||||||||||||||||| |||| || | ||| ||||||||||||||    
T  23793644 ataagttgttttcagcttatttctataagctttccaagatagcttatgaaac 23793593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 34414793 - 34414844
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| |||||||||| ||  |||| ||||||||    
T  34414793 cataagttgttttcagcttattttcataaactctccatgatagtttatgaaa 34414844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 35394507 - 35394558
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||| ||||||| |||||| ||||||| |||||||||||||    
T  35394507 cataagctgttttcaacttattttcataaattcttcaagatagcttatgaaa 35394558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 41724350 - 41724251
Alignment:
Q  43 ttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttattt 142  Q
    |||||||||||||||||||  || || ||||||| |||  ||||  ||||  ||||||||| ||||||  ||| |  |||||||||||||||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccataagttgttttcagcttattt 41724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 48528609 - 48528566
Alignment:
Q  128 gttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| ||||||||| || ||||||||||||||    
T  48528609 gttttcagcttatttctataaactctccagaatagcttatgaaa 48528566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 51929890 - 51929843
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgag 79  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||||||||    
T  51929890 tttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 1833874 - 1833820
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||| ||||||||||||||||||| ||||||||| ||| || | |||||||||||    
T  1833874 tttgaattgacttatttgaacttaactactagcataaacacctatgagattgttt 1833820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 2321289 - 2321211
Alignment:
Q  70 tacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcaca-taagttgttttcagcttatttccata 147  Q
    |||||||||||||||||  || |||||||||||| ||||||  ||| || || |||||||||||||| | |||||||||    
T  2321289 tacttgtgagattgtttgagagagtttatggaaacaacttattacatgcccattaagttgttttcagttaatttccata 2321211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 22031248 - 22031206
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| ||||||||||| | ||||||||||||||||||||||    
T  22031248 ttttcatcttatttccatcatctcttcaaaatagcttatgaaa 22031206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 24158434 - 24158516
Alignment:
Q  29 atatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttac 111  Q
    |||||||||||| ||||||| | ||||||||||  || || ||||||||| | ||||| ||| || ||||||||| |||||||    
T  24158434 atatttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaacttac 24158516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 25459551 - 25459605
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||||||||| |||||||| |||||| ||||||| ||  ||||||||||||||||    
T  25459551 tttggattgatttatttgagcttatcaactagcataagcacttgtgagattgttt 25459605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 31010540 - 31010430
Alignment:
Q  43 ttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttattt 142  Q
    ||||||||||||| |||||| || ||  |||||||||  |||||  ||||| |||| |||| ||||||  ||| |  |||||| ||||||||||||| ||    
T  31010540 ttatttgaacttaactactaacataagaacttgtgagtgtgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttcagcttaatt 31010441  T
Q  143 ccataaactct 153  Q
    |||||| ||||    
T  31010440 ccataagctct 31010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 41633420 - 41633370
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||| ||||||    
T  41633420 ataaattgttttcagcttattttcataagctctccaaaatagctgatgaaa 41633370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 41671370 - 41671320
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||| ||||||| |||||| | ||||| |||||||||||||    
T  41671370 ataagttgttttcaacttattttcataaatttttcaagatagcttatgaaa 41671320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 44014719 - 44014773
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||| |||||||||  ||||||||||||| ||| |||||||||| |||||    
T  44014719 tttggattggcttatttgagtttatctactagcataaacacttgtgagactgttt 44014773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 45590800 - 45590746
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||| |||||||| |||||||||||||||||||| ||  |||||||||| |||||    
T  45590800 tttgaattgacttttttgaacttatctactagcataagcacttgtgagactgttt 45590746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 48991912 - 48991870
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatag 162  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||    
T  48991912 cataagttgttttcagcttattttcataatctctccaaaatag 48991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 584195 - 584162
Alignment:
Q  32 tttggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||| ||||||||||||||    
T  584195 tttggattgacttatttgagcttatctactagca 584162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 21862184 - 21862217
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  21862184 cataagttgttttcagcttatttccataagctct 21862217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 45432948 - 45432981
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  45432948 cataagttgttttcagcttatttccataagctct 45432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 2080999 - 2081031
Alignment:
Q  27 gtatatttggattgacttatttgaacttatcta 59  Q
    |||| ||||||||||||||||||||||||||||    
T  2080999 gtatgtttggattgacttatttgaacttatcta 2081031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 5292530 - 5292562
Alignment:
Q  121 ataagttgttttcagcttatttccataaactct 153  Q
    |||||||||||||||||||||||||||| ||||    
T  5292530 ataagttgttttcagcttatttccataagctct 5292562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 14548737 - 14548781
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||| |||| || |||| |||||||||    
T  14548737 tgttttcagcttatttccataagctctccagaataacttatgaaa 14548781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 38462342 - 38462314
Alignment:
Q  120 cataagttgttttcagcttatttccataa 148  Q
    |||||||||||||||||||||||||||||    
T  38462342 cataagttgttttcagcttatttccataa 38462314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 41848635 - 41848691
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||| |||||||||||||||  |||||||||| || ||| |||||| |||||||||    
T  41848635 tatttagattgacttatttgagtttatctactaacataaacacttgtaagattgttt 41848691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 53736129 - 53736193
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatg-aaacgacttatatga 183  Q
    ||||||||| ||||||||||||| ||||||| |||||  |||| ||||| |||| ||||||||||    
T  53736129 cataagttgctttcagcttattttcataaacacttcagtataggttatgaaaacaacttatatga 53736193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 54137636 - 54137684
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatga 169  Q
    |||||||||| ||||||||||||||||| |||  || ||||||||||||    
T  54137636 ataagttgttatcagcttatttccataagctcaccagaatagcttatga 54137684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 7871704 - 7871653
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  7871704 cataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaa 7871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 42817297 - 42817436
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    ||||||||||||||||| | ||||| || | | |  ||||||||||||| | ||||  | |||||||| ||| |||||||  || |  | ||||||||||    
T  42817297 tttggattgacttatttaatcttatttattggtattaatacttgtgagactatttagtagagtttatgaaaacaacttacggcatgttcttaagttgttt 42817396  T
Q  132 tcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    | |||||| |||||||| ||||||| ||||||||||||||    
T  42817397 ttagcttacttccataagctcttcagaatagcttatgaaa 42817436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 9478444 - 9478314
Alignment:
Q  36 gattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcag 135  Q
    ||||||||||||||||||||||||| | || || |||||||| || |||||  || |||||||| ||| ||||||  ||| |  |||||| ||||||||     
T  9478444 gattgacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcat 9478345  T
Q  136 cttatttccataaactcttcaaaatagctta 166  Q
    |||| |||||| |||||| ||  ||||||||    
T  9478344 cttacttccatcaactctccacgatagctta 9478314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 43141953 - 43141881
Alignment:
Q  99 ggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| ||||||  ||| || |||||||||||||||  ||||||||||||||||||||  |||||||||||||    
T  43141953 ggaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaa 43141881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 15120332 - 15120193
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||   |||||  || || ||||||||| ||||||  ||| |  ||| || |||||    
T  15120332 tttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgttcattagctgttt 15120233  T
Q  132 tcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    | |||||||||  |||| |||| ||  |||||||| ||||    
T  15120232 taagcttattttgataagctctccatgatagcttacgaaa 15120193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 15978046 - 15977995
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| ||||||||||||||||| ||||| |||| |||||||||||||||||    
T  15978046 cataaattgttttcagcttattttcataatctctccaaaatagcttatgaaa 15977995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 35379025 - 35379076
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  35379025 cataagttgttttcagcttattttcataagctctccaagatagcttatgaaa 35379076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 1056371 - 1056413
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  1056371 ttttcagcttatttctataaactcttcaagatagcttatgaaa 1056413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 6227811 - 6227761
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||| || |||||| |||| |||||||||||||||||    
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaa 6227761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 6988170 - 6988125
Alignment:
Q  126 ttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  6988170 ttgttttcatcttatttctataaactcttcaagatagcttatgaaa 6988125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 9478103 - 9478058
Alignment:
Q  35 ggattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||    
T  9478103 ggattgacttatttgaacttatctattagcacaaacacttatgaga 9478058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 34651959 - 34652096
Alignment:
Q  34 tggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttc 133  Q
    ||||||||||||||||||| | ||| || ||   | |||||||||||  |||   ||||| |||| |||| ||||||  ||| |  |||||| |||||||    
T  34651959 tggattgacttatttgaacatgtctgcttgcttgagtacttgtgagacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttc 34652058  T
Q  134 agcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    | ||||||||||||| |||| ||| |||||||||||||    
T  34652059 aacttatttccataagctctccaagatagcttatgaaa 34652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 41032965 - 41032997
Alignment:
Q  121 ataagttgttttcagcttatttccataaactct 153  Q
    |||||||||||||||||||||||||||||||||    
T  41032965 ataagttgttttcagcttatttccataaactct 41032997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 3067396 - 3067439
Alignment:
Q  128 gttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||    
T  3067396 gtttttagcttattttcataaactcttcaagatagcttatgaaa 3067439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 3227692 - 3227743
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||| ||||||||||||||||| || || |||| |||||||||||||||||    
T  3227692 cataaattgttttcagcttattttcaaaatctctccaaaatagcttatgaaa 3227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 3235393 - 3235444
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||  |||||||    
T  3235393 cataagctgttttcagcttatttccataaacttttcaagatagtatatgaaa 3235444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 11488338 - 11488287
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| ||||| |||| ||  |||||||||||||    
T  11488338 cataagttgttttcagcttatttgcataatctctccaggatagcttatgaaa 11488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 16867800 - 16867749
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||| |||||    
T  16867800 cataagttgttttcaacttatttccataagctctccaagatagcttgtgaaa 16867749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 156
Target Start/End: Original strand, 1741529 - 1741559
Alignment:
Q  126 ttgttttcagcttatttccataaactcttca 156  Q
    |||||||||||||||||||||||||||||||    
T  1741529 ttgttttcagcttatttccataaactcttca 1741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 1810716 - 1810678
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttat 1810678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 27288691 - 27288641
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||| |||||||| ||  ||| |||||||||    
T  27288691 ataagttgttttcagcttatttccgtaaactctacatgataacttatgaaa 27288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 28677668 - 28677714
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagctta 166  Q
    |||||||||||||| |||||||||||||| |||| ||||||| ||||    
T  28677668 cataagttgttttcggcttatttccataagctctccaaaataactta 28677714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 41144270 - 41144220
Alignment:
Q  121 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||| |||||||||||| ||||||| |||  ||||||||||||    
T  41144270 ataagttgtttttagcttatttccagaaactctccaagttagcttatgaaa 41144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 43259984 - 43259938
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtga 78  Q
    ||||||||| |||||||||||||||||||||||| ||  ||||||||    
T  43259984 tttggattggcttatttgaacttatctactagcataagcacttgtga 43259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 43985021 - 43985063
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||| ||||| |||||||| |||||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaa 43985063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 5043481 - 5043514
Alignment:
Q  32 tttggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||| ||||||||||||||    
T  5043481 tttggattgacttatttgaccttatctactagca 5043514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 9996887 - 9996770
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    ||||| ||||||||||||| |||||| ||||||| || ||||||||||| || ||  || || |||| |||| ||||||  |||  | ||||| |||||     
T  9996887 tttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacatacccataaattgttc 9996788  T
Q  132 tcagcttatttccataaa 149  Q
    ||| ||||||| ||||||    
T  9996787 tcaacttattttcataaa 9996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 10563481 - 10563514
Alignment:
Q  32 tttggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||||||||||||| ||||    
T  10563481 tttggattgacttatttgaacttatctaccagca 10563514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 16551760 - 16551877
Alignment:
Q  32 tttggattgacttatttgaa-cttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgtt 130  Q
    ||||||||||||| ||| || |||||||| |  || ||| ||||| |||||||||||  | || ||||||||| | ||||  |||   |||||||||||     
T  16551760 tttggattgacttgttttaagcttatctattgacataaacacttgcgagattgtttagaagagcttatggaaagatcttatgacatatacataagttgta 16551859  T
Q  131 ttcagcttatttccataa 148  Q
    ||||||||||||||||||    
T  16551860 ttcagcttatttccataa 16551877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 24098156 - 24098111
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaac 172  Q
    |||||||||||||||||||||| |||| ||||||||  ||||||||    
T  24098156 tgttttcagcttatttccataagctctccaaaataggctatgaaac 24098111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 29628752 - 29628801
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatga 169  Q
    ||||| |||||||||||||||||||||||| | | ||| |||||||||||    
T  29628752 cataaattgttttcagcttatttccataaattttccaagatagcttatga 29628801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 2790387 - 2790343
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgt 76  Q
    ||||||||| |||||||||||||||||||||| | || |||||||    
T  2790387 tttggattggcttatttgaacttatctactagtataagtacttgt 2790343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3078529 - 3078573
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgt 76  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||||    
T  3078529 tttggattgacttatttgagcttatctaccaacacaaacacttgt 3078573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 9395278 - 9395242
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaa 68  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  9395278 tttggattgacttatttgagcttatttactagcacaa 9395242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 7244741 - 7244690
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  7244741 cataagttgttttcagcttattttcataagctctccaatatagcttatgaaa 7244690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 24363610 - 24363661
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  24363610 cataagttgttttcagcttatttccataacctctccaggatagcttatgaaa 24363661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 3019928 - 3019854
Alignment:
Q  36 gattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaactta 110  Q
    ||||||||||||||| |||||||||||| | || |||||||||| ||||||| ||  | ||||||||| ||||||    
T  3019928 gattgacttatttgagcttatctactagtataagtacttgtgagcttgtttaagagtgcttatggaaacaactta 3019854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 23215004 - 23214950
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    ||||||||||||||||||| |||||||||||||| ||| |||| ||||| |||||    
T  23215004 tttggattgacttatttgaccttatctactagcataaacacttatgagactgttt 23214950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 39506008 - 39505966
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  39506008 ttttcagcttatttccataaactctccagaatagcttatgaaa 39505966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 12792417 - 12792558
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgt 129  Q
    |||||| |||||||||||| ||||||||||||  || ||| ||||| |||| | ||||  | || ||| | ||| | |||| || | || |||||  |||    
T  12792417 tatttgaattgacttatttcaacttatctacttacataaacacttgagagactatttaatagagcttaagaaaatagcttataatatgctcataaactgt 12792516  T
Q  130 tttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    | |||||||||||| |||| |||||||| |||||||||||||    
T  12792517 tatcagcttatttcaataagctcttcaagatagcttatgaaa 12792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 4966308 - 4966166
Alignment:
Q  32 tttggattgacttatttgaacttatctactagc---acaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttg 128  Q
    |||||||| | |||||||| |||||||||| ||   | | |||||||||||| |||||| || || |||| ||||  |||||  | | |  |||||||||    
T  4966308 tttggattaaattatttgagcttatctactggcggcatacatacttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttg 4966209  T
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||| |||||||||||| |||||||  || ||||||||||    
T  4966208 ttttcagtttatttccataagctcttcaggatggcttatgaaa 4966166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 8427164 - 8427108
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttt 86  Q
    |||||||||||| |||||||| ||||||||||| || || ||||||||||| |||||    
T  8427164 tatttggattgatttatttgagcttatctactaacataagtacttgtgagactgttt 8427108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 12792579 - 12792623
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaa 12792623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 28128410 - 28128450
Alignment:
Q  126 ttgttttcagcttatttccataaactcttcaaaatagctta 166  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  28128410 ttgttttcagcttatttccataaattctccaaaatagctta 28128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 26935566 - 26935617
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||||||||| ||||| | ||||| ||||||||    
T  26935566 cataagctgttttcagcttatttccataagctctttagaatagattatgaaa 26935617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 29363657 - 29363602
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgttta 87  Q
    ||||||||| ||||||||||||||||||||| || ||  |||||||||| ||||||    
T  29363657 tttggattggcttatttgaacttatctactaacataagcacttgtgagactgttta 29363602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 44151489 - 44151540
Alignment:
Q  120 cataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||| |||||||||||||||||||||| || ||||| |||| ||||||||    
T  44151489 cataagatgttttcagcttatttccataagcttttcaagatagtttatgaaa 44151540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 46082185 - 46082054
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttt 131  Q
    ||||||||| || |||||| |||| ||||| ||| ||| | || ||||| |||| | || || ||||| ||| ||||||  ||| |  ||||||||||||    
T  46082185 tttggattggctaatttgatcttacctactggcataaacaattttgagactgttaatgagagcttatgaaaacaacttatgacatgaccataagttgttt 46082086  T
Q  132 tcagcttatttccataaactcttcaaaatagc 163  Q
    ||||||||||| ||||| |||| || ||||||    
T  46082085 tcagcttattttcataagctctccagaatagc 46082054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  33 ttggattgacttatttgaacttatctactagcacaaatacttgtgag 79  Q
    |||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 12792642 - 12792684
Alignment:
Q  129 ttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  12792642 ttttcagcttatttccatatgctcttcaagatagcttatgaaa 12792684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 20553234 - 20553136
Alignment:
Q  50 aacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataa 148  Q
    |||||| | ||||||| ||  |||||||||| |||| | || || ||||||||| | ||||| ||| |  |||||||||||||||| ||||||||||||    
T  20553234 aacttaccaactagcataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataa 20553136  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 33601748 - 33601798
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaac 172  Q
    ||||||||||| ||||||||| |||||| |||||| |||||||||| ||||    
T  33601748 taagttgtttttagcttattttcataaagtcttcacaatagcttataaaac 33601798  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 61
Target Start/End: Original strand, 22283567 - 22283596
Alignment:
Q  32 tttggattgacttatttgaacttatctact 61  Q
    ||||||||||||||||||||||||||||||    
T  22283567 tttggattgacttatttgaacttatctact 22283596  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 25596092 - 25596043
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||||| ||||||| ||||| |||| ||| |||||||||||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagcttatgaaa 25596043  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27496416 - 27496449
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    |||||| |||||||||||||||||||||||||||    
T  27496416 cataagctgttttcagcttatttccataaactct 27496449  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27503074 - 27503107
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    |||||| |||||||||||||||||||||||||||    
T  27503074 cataagctgttttcagcttatttccataaactct 27503107  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 33601126 - 33601175
Alignment:
Q  122 taagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    ||||||||||| ||||||||| |||||||||||   ||||||||||||||    
T  33601126 taagttgtttttagcttattttcataaactctttgcaatagcttatgaaa 33601175  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 40598406 - 40598439
Alignment:
Q  32 tttggattgacttatttgaacttatctactagca 65  Q
    ||||||||||||||||||| ||||||||||||||    
T  40598406 tttggattgacttatttgagcttatctactagca 40598439  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 46086494 - 46086457
Alignment:
Q  134 agcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  46086494 agcttatttccataaactcttcaagatagcctatgaaa 46086457  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 5620071 - 5620119
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtga 78  Q
    |||||||||||||||||||||||| ||||||| ||| || | |||||||    
T  5620071 tatttggattgacttatttgaactcatctactggcataagttcttgtga 5620119  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 12792709 - 12792749
Alignment:
Q  127 tgttttcagcttatttccataaactcttcaaaatagcttat 167  Q
    |||||||||||||||||| ||| ||||||| ||||||||||    
T  12792709 tgttttcagcttatttccgtaagctcttcagaatagcttat 12792749  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 25511776 - 25511748
Alignment:
Q  32 tttggattgacttatttgaacttatctac 60  Q
    |||||||||||||||||||||||||||||    
T  25511776 tttggattgacttatttgaacttatctac 25511748  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 27626084 - 27626184
Alignment:
Q  72 cttgtgagattgtttacgaaagtttatggaaaaaacttacaacacgcacataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 171  Q
    |||||||||||||||  ||||| ||||||||| | ||||  ||| |  |||||  |||||| | ||||||||||||| |||||||  |||||||| ||||    
T  27626084 cttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctcttcatgatagcttaggaaa 27626183  T
Q  172 c 172  Q
    |    
T  27626184 c 27626184  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 29286848 - 29286804
Alignment:
Q  124 agttgttttcagcttatttccataaactcttcaaaatagcttatg 168  Q
    ||||||||||||||||||| ||||| || ||||||||| ||||||    
T  29286848 agttgttttcagcttatttacataagcttttcaaaataacttatg 29286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 31341284 - 31341208
Alignment:
Q  32 tttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaact 108  Q
    ||||||||||||||||||| ||| |||||| ||| ||| |||| | ||| |||||  || |||||||||||| ||||    
T  31341284 tttggattgacttatttgagcttttctacttgcataaacacttttaagactgtttgggagagtttatggaaacaact 31341208  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 150
Target Start/End: Original strand, 10626 - 10656
Alignment:
Q  120 cataagttgttttcagcttatttccataaac 150  Q
    |||||||||||||||||||||||||||||||    
T  10626 cataagttgttttcagcttatttccataaac 10656  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 3534 - 3501
Alignment:
Q  120 cataagttgttttcagcttatttccataaactct 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  3534 cataagttgttttcagcttatttccataatctct 3501  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 9697 - 9778
Alignment:
Q  30 tatttggattgacttatttgaacttatctactagcacaaatacttgtgagattgtttacgaaagtttatggaaaaaacttac 111  Q
    ||||| |||||| ||||||||  |||||||||| || |||||||||||||| |||||  || ||  |||||||| |||||||    
T  9697 tatttagattgatttatttgagtttatctactaacataaatacttgtgagactgtttgggagagcctatggaaacaacttac 9778  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 12641 - 12685
Alignment:
Q  36 gattgacttatttgaacttatctactagcacaaatacttgtgaga 80  Q
    |||||||||||||||||||||| ||||||| ||  ||||||||||    
T  12641 gattgacttatttgaacttatccactagcataagcacttgtgaga 12685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 26175 - 26215
Alignment:
Q  174 acttatatgataagagcttattctataagcgcttaattaag 214  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  26175 acttatatgataagtgcttatgctataagcacttaattaag 26215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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